APEX1

General Information

Gene Name       : APEX1
Gene ID             : ENSG00000100823.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: APEX1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878APEX1ENSG00000100823.11293.66276.79285.23ENCSR000AEF
HepG2APEX1ENSG00000100823.11269.26300.71284.99ENCSR985KAT
K562APEX1ENSG00000100823.11153.18184.60168.89ENCSR000AEO

Assays

4 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 4028ENCSR256NCIAPEX1K562ReleasedENCAB328DHCENCSR937QWU  
eCLIPeCLIP: 4081ENCSR554GSWAPEX1HepG2ReleasedENCAB328DHCENCSR066WPD  
knockdown followed by RNA-seq APEX1-BGKcLV13-K562ENCSR989ZNZAPEX1K562ReleasedENCSR712CQC   CRISPRKD% = 70.4,71.9
knockdown followed by RNA-seq APEX1-BGHcLV14-HepG2ENCSR367BWLAPEX1HepG2ReleasedENCSR750CPT   CRISPRKD% = 65.6,60.5






  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
APEX14028K562ENCSR256NCIENCSR937QWUENCAB328DHCMA1-440TB260470ReleasedENCODE4
APEX14081HepG2ENCSR554GSWENCSR066WPDENCAB328DHCMA1-440TB260470ReleasedENCODE4


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
APEX1ENCAB328DHCMA1-440TB260470Released, ENCODE4BGHcLV14-5, Released, ENCODE4BGKcLV13-3, Released, ENCODE4


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
APEX1K562CRISPRENCSR989ZNZENCSR712CQCAPEX1-BGKcLV13-3,APEX1-BGKcLV13-4NT-BGKcLV13-1,NT-BGKcLV13-270.4,71.9ReleasedENCODE4
APEX1K562CRISPRBGKcLV13-5,BGKcLV13-6BGKcLV13-1,BGKcLV13-255.4,55.6NotSatisfiedENCODE4
APEX1K562CRISPRBGKcLV13-7,BGKcLV13-8BGKcLV13-1,BGKcLV13-234.6,38.4NotSatisfiedENCODE4
APEX1HepG2CRISPRBGHcLV14-3,BGHcLV14-4BGHcLV14-1,BGHcLV14-258.0,61.6NotSatisfiedENCODE4
APEX1HepG2CRISPRENCSR367BWLENCSR750CPTAPEX1-BGHcLV14-5,APEX1-BGHcLV14-6NT-BGHcLV14-1,NT-BGHcLV14-265.6,60.5ReleasedENCODE4
APEX1HepG2CRISPRBGHcLV14-7,BGHcLV14-8BGHcLV14-1,BGHcLV14-240.9,55.7NotSatisfiedENCODE4


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
APEX1Product_ID: MA1-440
Lot_ID: TB260470
Source: Thermo Fisher
Target Name: APEX1-human		 APEX1-HepG2-CRISPR.png<br>Caption: Western blot following CRISPR against APEX1 in HepG2 whole cell lysate using APEX1 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against APEX1. APEX1 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.
 ThermoFisher_MA1-440_TB260470_APEX1.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the APEX1 specific antibody, MA1-440. Lanes 1 and 3 are 2.5% of five million whole cell lysate input. Lanes 2 and 4 are 50% of IP enrichment from five million whole cell lysate using normal IgG antibody and the APEX1-specific antibody, MA1-440. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
 APEX1-K562-CRISPR.png<br>Caption: Western blot following CRISPR against APEX1 in K562 whole cell lysate using APEX1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against APEX1. APEX1 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.








RNA Targets

  • eCLIP assay for APEX1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • APEX1 RNA is bound by 22 proteins.  







eCLIP assay for APEX1 is not avaliable on ENCORE database.





22 proteins are bound to APEX1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr142092581420925867+3'-UTR5.405636.23813HepG2SUB1
chr142092530020925322+3'-UTR,CDS3.396404.74241K562YBX3
chr142092482720924881+3'-UTR,CDS,intron-Distal3.347504.45081HepG2ZNF800
chr142092531620925352+3'-UTR,CDS3.280964.70577HepG2G3BP1
chr142092413020924198+3'-UTR,CDS,intron-Distal3.3294810.40328HepG2BCLAF1
chr142092564020925756+3'-UTR,CDS3.2300113.21804HepG2LARP4
chr142092391920923973+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.581364.54206HepG2PRPF8
chr142092565620925726+3'-UTR,CDS3.185837.14274K562PABPC4
chr142092572120925762+3'-UTR4.092988.34773K562YBX3
chr142092585720925899+3'-UTR4.6853311.77823K562PABPC4
chr142092576420925812+3'-UTR4.4342916.44928K562PUM2
chr142092407120924113+3'-UTR,CDS,intron-Distal,intron-Proximal3.506028.10543K562UCHL5
chr142092410420924186+3'-UTR,CDS,intron-Distal3.8931412.06601HepG2G3BP1
chr142092407220924104+3'-UTR,CDS,intron-Distal,intron-Proximal3.777098.49476HepG2G3BP1
chr142092422520924260+3'-UTR,CDS,intron-Distal3.508157.72032HepG2G3BP1
chr142092544220925477+3'-UTR,CDS3.886287.70480K562YBX3
chr142092572320925810+3'-UTR3.104754.61266K562IGF2BP1
chr142092414220924194+3'-UTR,CDS,intron-Distal3.073064.87903HepG2GRWD1
chr142092482620924869+3'-UTR,CDS,intron-Distal,intron-Proximal4.7387810.83378HepG2G3BP1
chr142092528620925341+3'-UTR,CDS3.949076.12687HepG2RPS3
chr142092571820925764+3'-UTR3.526818.43321K562PUM2
chr142092581920925883+3'-UTR3.088457.99409HepG2LARP4
chr142092419920924260+3'-UTR,CDS,intron-Distal3.7666212.82131HepG2BCLAF1
chr142092582720925864+3'-UTR3.023883.62410K562TIA1
chr142092582320925857+3'-UTR4.032285.37920K562PABPC4
chr142092352220923574+5'-UTR,intron-Distal,intron-Proximal3.353625.35401HepG2PRPF8
chr142092344120923512+5'-UTR,intron-Distal,intron-Proximal3.587638.98176K562DDX3X
chr142092343520923512+5'-UTR,intron-Distal,intron-Proximal3.029144.27599HepG2EIF3D
chr142092372520923757+5'-UTR,intron-Distal,intron-Proximal3.710774.32211K562DDX3X
chr142092377120923820+5'-UTR,CDS,intron-Distal,intron-Proximal3.206356.73537HepG2RPS3
chr142092382420923862+5'-UTR,CDS,intron-Distal,intron-Proximal3.325986.95218K562UCHL5
chr142092381120923862+5'-UTR,CDS,intron-Distal,intron-Proximal3.199904.56648HepG2GRSF1
chr142092351020923568+5'-UTR,intron-Distal,intron-Proximal3.281243.82278HepG2FUS
chr142092381220923883+5'-UTR,CDS,intron-Distal,intron-Proximal3.074084.39873HepG2SRSF1
chr142092500520925015+CDS,intron-Distal3.103125.13250K562YBX3
chr142092493320924962+CDS,intron-Distal3.6212822.08818K562YBX3
chr142092519320925249+CDS,intron-Proximal5.223228.66806HepG2G3BP1
chr142092492020924971+CDS,intron-Distal4.421284.53233HepG2ZNF800
chr142092492120924933+CDS,intron-Distal3.7769721.95924K562YBX3
chr142092486720924921+CDS,intron-Distal3.4412214.90763K562YBX3
chr142092426520924337+intron-Distal,intron-Proximal4.281204.22101K562PRPF8
chr142092365120923724+intron-Distal,intron-Proximal4.264157.30408HepG2SF3B4
chr142092430320924336+intron-Distal,intron-Proximal3.872203.18234K562BUD13
chr142092395420923997+intron-Distal,intron-Proximal3.066614.05586HepG2U2AF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for APEX1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for APEX1 is not available on ENCORE database.

  • 92 RBPs can affect the levels of APEX1.  








The Knockdown/knockout RNA-Seq assay for APEX1 is not available on ENCORE database.





92 RBPs can affect the gene expression of APEX1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
APEX1ENSG00000100823.74055.728906203.54220-0.6131020.7803019.21380HepG2AUH
APEX1ENSG00000100823.72268.799703218.97090-0.504705.105703.92040HepG2BCLAF1
APEX1ENSG00000100823.73954.908004682.50490-0.243602.615601.86530HepG2CALR
APEX1ENSG00000100823.73269.512604713.22050-0.527606.690605.65700HepG2CPSF6
APEX1ENSG00000100823.74043.428803473.708500.219002.585601.60430HepG2YBX3
APEX1ENSG00000100823.73906.202205197.66130-0.412108.269407.27080HepG2CELF1
APEX1ENSG00000100823.74050.870303186.446500.346207.908306.62050HepG2DDX19B
APEX1ENSG00000100823.73040.560206101.69410-1.0049018.6472017.17440HepG2DDX3X
APEX1ENSG00000100823.72657.499405241.08530-0.9798015.1025013.81620HepG2DDX6
APEX1ENSG00000100823.73046.476503380.84620-0.150201.971101.40360HepG2DNAJC2
APEX1ENSG00000100823.72394.354105038.77570-1.0734021.0322019.50300HepG2EIF2S1
APEX1ENSG00000100823.73573.524805568.62960-0.640006.980505.96510HepG2EIF4A3
APEX1ENSG00000100823.73938.036305281.62540-0.423504.610703.57610HepG2EIF4G2
APEX1ENSG00000100823.75582.162907122.50100-0.351608.019007.08680HepG2ETF1
APEX1ENSG00000100823.74088.601403366.618400.280202.755501.92270HepG2EWSR1
APEX1ENSG00000100823.72088.140303031.83110-0.538005.891704.10770HepG2FKBP4
APEX1ENSG00000100823.74306.493605617.93830-0.383503.414002.65050HepG2FXR1
APEX1ENSG00000100823.72686.830205211.76430-0.9559015.6545014.13240HepG2G3BP1
APEX1ENSG00000100823.74284.500205342.87240-0.318502.302801.71530HepG2GPKOW
APEX1ENSG00000100823.74221.526605136.06550-0.282904.406203.27560HepG2HNRNPA2B1
APEX1ENSG00000100823.74004.167705432.76400-0.4402010.790109.49560HepG2HNRNPF
APEX1ENSG00000100823.74182.225005276.67680-0.335403.157202.41170HepG2HNRNPK
APEX1ENSG00000100823.74529.214805090.47050-0.168502.661702.00060HepG2HNRNPL
APEX1ENSG00000100823.73011.684903930.34620-0.384104.640403.44270HepG2HNRNPM
APEX1ENSG00000100823.73385.119503804.98040-0.168702.091201.55610HepG2HNRNPU
APEX1ENSG00000100823.74091.526005349.72300-0.386805.627704.63340HepG2IGF2BP1
APEX1ENSG00000100823.73157.594105297.75230-0.7466011.069909.81440HepG2IGF2BP2
APEX1ENSG00000100823.74336.509403886.653700.157902.475701.77840HepG2ILF2
APEX1ENSG00000100823.71346.531502807.66440-1.0601012.208409.35960HepG2ILF3
APEX1ENSG00000100823.73228.399004401.62470-0.447203.023401.71790HepG2KRR1
APEX1ENSG00000100823.73643.329705619.89710-0.625307.808106.72020HepG2MAGOH
APEX1ENSG00000100823.73407.416205199.95600-0.609804.679803.40040HepG2MTPAP
APEX1ENSG00000100823.73489.043505784.64390-0.729409.879908.72600HepG2NCBP2
APEX1ENSG00000100823.71912.362002632.11690-0.460902.257101.46960HepG2PABPC1
APEX1ENSG00000100823.73147.595305151.95230-0.710909.583308.25850HepG2PABPC4
APEX1ENSG00000100823.74820.118803766.221300.355907.158405.89850HepG2PARN
APEX1ENSG00000100823.72731.894303788.36980-0.471702.905401.83950HepG2PCBP2
APEX1ENSG00000100823.71641.358402809.54030-0.7754011.282009.80760HepG2PRPF8
APEX1ENSG00000100823.73828.079305713.12450-0.5777018.4209017.24350HepG2PTBP1
APEX1ENSG00000100823.73700.191805289.90140-0.515607.806606.87290HepG2PUF60
APEX1ENSG00000100823.76279.122605615.587700.161003.084302.46670HepG2PUM1
APEX1ENSG00000100823.74790.368905611.40890-0.228202.267301.65780HepG2PUM2
APEX1ENSG00000100823.73074.681406187.85270-1.0090039.0230037.15560HepG2QKI
APEX1ENSG00000100823.77548.460405953.091900.342406.493205.78050HepG2RBM22
APEX1ENSG00000100823.73183.429905615.72380-0.8189020.2438018.53430HepG2RBM25
APEX1ENSG00000100823.74749.069206358.31410-0.4210010.879309.93870HepG2NELFE
APEX1ENSG00000100823.75196.285805921.62420-0.188502.795902.17630HepG2RECQL
APEX1ENSG00000100823.73742.897405852.39720-0.6449011.201909.98820HepG2RPLP0
APEX1ENSG00000100823.72677.789403591.44700-0.423502.357001.48340HepG2RPS10
APEX1ENSG00000100823.71853.260702779.17350-0.584606.081904.96510HepG2RRP9
APEX1ENSG00000100823.72697.429803977.81310-0.560403.733401.95300HepG2RTF1
APEX1ENSG00000100823.73955.199005046.84030-0.351603.510202.72430HepG2SF3B1
APEX1ENSG00000100823.73939.953905948.43480-0.5943015.8443014.60750HepG2SF3B4
APEX1ENSG00000100823.74187.603105072.44490-0.276605.898704.93650HepG2SLBP
APEX1ENSG00000100823.75281.700006723.79670-0.348308.928408.16930HepG2SRFBP1
APEX1ENSG00000100823.74715.715506208.74140-0.3968011.0086010.20180HepG2SRSF1
APEX1ENSG00000100823.74221.162905223.15540-0.307305.024604.22070HepG2SRSF5
APEX1ENSG00000100823.73850.649305337.50640-0.4711012.4948011.20050HepG2SRSF7
APEX1ENSG00000100823.73296.644005051.02420-0.6156017.8036016.62590HepG2SRSF9
APEX1ENSG00000100823.74799.561705837.84460-0.282505.541004.86380HepG2SSB
APEX1ENSG00000100823.73085.474903846.65640-0.318103.189702.18540HepG2SUPT6H
APEX1ENSG00000100823.72572.658903626.03740-0.495104.859104.00180HepG2SUPV3L1
APEX1ENSG00000100823.73331.737405580.27980-0.7441024.1879022.75650HepG2TAF15
APEX1ENSG00000100823.73730.646904969.56170-0.413704.610803.70660HepG2TARDBP
APEX1ENSG00000100823.73899.817405127.91920-0.395005.732304.54080HepG2TIA1
APEX1ENSG00000100823.73108.664403697.07590-0.250102.535802.05320HepG2TIAL1
APEX1ENSG00000100823.72872.099803730.31140-0.377207.714406.85000HepG2TRIM56
APEX1ENSG00000100823.74147.856805470.60360-0.399303.257602.34960HepG2UBE2L3
APEX1ENSG00000100823.73253.382504274.79640-0.393909.477308.31850HepG2UPF1
APEX1ENSG00000100823.75214.696804127.161600.337307.384306.48370HepG2UTP3
APEX1ENSG00000100823.74190.530604880.74450-0.220003.942503.16490HepG2ZC3H8
APEX1ENSG00000100823.73412.383704701.47040-0.4623016.5651015.50710HepG2ZNF622
APEX1ENSG00000100823.72214.086602695.81200-0.284002.465201.35680K562AARS
APEX1ENSG00000100823.72162.367302601.62600-0.266803.800002.66560K562BCLAF1
APEX1ENSG00000100823.72316.042903678.73400-0.6675010.090908.58290K562CPSF6
APEX1ENSG00000100823.75149.354106496.42820-0.335304.354503.12260K562CELF1
APEX1ENSG00000100823.72939.776703523.48820-0.261302.455101.31860K562DDX21
APEX1ENSG00000100823.71416.433101732.68620-0.290702.426101.45330K562DDX3X
APEX1ENSG00000100823.73472.453804449.68190-0.357706.945705.97810K562DDX47
APEX1ENSG00000100823.73839.156803293.561600.221002.443201.62730K562DKC1
APEX1ENSG00000100823.73018.894203519.79790-0.221502.619301.91540K562EIF2S2
APEX1ENSG00000100823.71783.352202438.28030-0.451303.550102.36410K562EIF3D
APEX1ENSG00000100823.72708.859503742.81910-0.466405.407204.20450K562FMR1
APEX1ENSG00000100823.72347.372403172.28760-0.434504.078102.95140K562FTO
APEX1ENSG00000100823.72182.728601882.582200.213302.183101.63430K562FXR1
APEX1ENSG00000100823.71013.170201570.58800-0.632405.088004.06270K562G3BP2
APEX1ENSG00000100823.72231.049503081.92280-0.466104.173603.01540K562HNRNPM
APEX1ENSG00000100823.71070.606101912.25300-0.8368011.519908.72790K562ILF3
APEX1ENSG00000100823.72711.882902255.129200.266002.412701.55820K562MATR3
APEX1ENSG00000100823.72985.552103450.96860-0.209002.375701.62620K562MTPAP
APEX1ENSG00000100823.71838.245502216.32850-0.269801.939301.30480K562PRPF8
APEX1ENSG00000100823.71733.776102195.52650-0.340603.590002.84460K562PTBP1
APEX1ENSG00000100823.73950.493603035.464800.380002.670502.13400K562PUS1
APEX1ENSG00000100823.73545.751102957.330700.261702.925702.31860K562RBM15
APEX1ENSG00000100823.71585.876602257.37040-0.509404.464203.42320K562RPS19
APEX1ENSG00000100823.73328.240302590.540100.361404.002402.69120K562SAFB
APEX1ENSG00000100823.73145.892103783.42760-0.266203.773202.82880K562SF3A3
APEX1ENSG00000100823.72404.182803340.07990-0.474304.315503.08290K562SF3B1
APEX1ENSG00000100823.73145.490203876.18090-0.301406.590805.21460K562SRPK2
APEX1ENSG00000100823.72622.972903144.65750-0.261703.416502.10590K562SRSF7
APEX1ENSG00000100823.73576.543604496.33980-0.330202.599701.39330K562STAU1
APEX1ENSG00000100823.71501.078302145.51030-0.515304.783403.41710K562SUPV3L1
APEX1ENSG00000100823.74108.862202916.009400.494608.482507.04150K562SYNCRIP
APEX1ENSG00000100823.71187.871101572.25800-0.404504.588703.56110K562U2AF2
APEX1ENSG00000100823.73364.915004065.79150-0.273003.012802.26310K562UPF1
APEX1ENSG00000100823.72999.680103617.59880-0.270204.932003.83120K562WDR43
APEX1ENSG00000100823.73416.581704104.62390-0.264702.308101.53150K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for APEX1 is not available on ENCORE database.





31 RBPs can affect the splicing of APEX1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEAPEX1ENSG00000100823.7chr14+209240512092426020923384209238622092482620924842-0.067000.000000.00000excludedK562AQR
A5SSAPEX1ENSG00000100823.7chr14+2092340520923587209234052092355320923736209237610.083000.000000.00000longerK562AQR
A5SSAPEX1ENSG00000100823.7chr14+209237362092426020923736209238622092482620925019-0.064000.000000.00000shorterK562AQR
A5SSAPEX1ENSG00000100823.7chr14+2092338420923548209233842092348720923736209238620.069000.000600.03996longerHepG2HNRNPK
A5SSAPEX1ENSG00000100823.7chr14+2092338420923548209233842092348720923736209238620.075000.000400.06258longerHepG2NCBP2
A5SSAPEX1ENSG00000100823.7chr14+2092373620923932209237362092386220924072209242600.074000.000000.00000longerHepG2TIAL1
A5SSAPEX1ENSG00000100823.7chr14+209237362092426020923736209238622092482620925019-0.079000.000000.00008shorterK562PTBP1
A5SSAPEX1ENSG00000100823.7chr14+2092338420923548209233842092348720923736209238620.071000.000340.03743longerK562PRPF8
A5SSAPEX1ENSG00000100823.7chr14+209233842092355320923384209234872092373620923761-0.057000.000000.00128shorterHepG2SRSF7
A5SSAPEX1ENSG00000100823.7chr14+2092340520923646209234052092355320923736209238310.075000.000010.01896longerHepG2HNRNPM
A5SSAPEX1ENSG00000100823.7chr14+2092373620923932209237362092386220924072209242600.054000.000000.00135longerHepG2HNRNPC
A5SSAPEX1ENSG00000100823.7chr14+209237362092426020923736209238622092482620925019-0.057000.000010.00132shorterK562SRSF1
A5SSAPEX1ENSG00000100823.7chr14+2092340520923646209234052092355320923736209238310.058000.000130.01577longerHepG2U2AF1
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.064000.000130.03820includedHepG2ILF3
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.068000.000070.00827includedHepG2TBRG4
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.085000.000010.00041includedHepG2PCBP2
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092393220924072209242600.120000.007440.04364includedK562PUS1
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.053000.000580.01741includedHepG2UCHL5
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.080000.000010.00278includedHepG2EFTUD2
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.090000.000000.00347includedHepG2HNRNPM
RIAPEX1ENSG00000100823.7chr14+2092338420923862209233842092348720923736209238620.057000.000180.00355includedK562PRPF8
RIAPEX1ENSG00000100823.7chr14+2092338420923862209233842092348720923736209238620.057000.002580.04784includedHepG2IGF2BP3
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.067000.000000.00000includedHepG2IGF2BP3
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.133000.000000.00000includedHepG2FTO
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.086000.000000.00012includedHepG2HNRNPA1
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092393220924072209242600.154000.006760.05656includedK562AKAP8L
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.110000.000000.00000includedHepG2TAF15
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.072000.000000.00000includedHepG2G3BP1
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.067000.000030.00365includedHepG2HNRNPC
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.131000.000000.00000includedHepG2TIAL1
RIAPEX1ENSG00000100823.7chr14+2092338420923862209233842092348720923736209238620.073000.000050.00113includedHepG2NCBP2
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.053000.000000.00000includedHepG2NCBP2
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.053000.000350.06492includedHepG2FUS
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.074000.000200.04781includedHepG2HLTF
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.071000.000160.01397includedK562CPSF6
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.079000.000000.00000includedK562WDR43
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.101000.000000.00000includedHepG2FUBP3
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092393220924072209242600.243000.003570.03781includedHepG2HNRNPK
RIAPEX1ENSG00000100823.7chr14+2092338420923862209233842092348720923736209238620.065000.000180.00328includedHepG2HNRNPK
RIAPEX1ENSG00000100823.7chr14+209233842092386220923384209234872092373620923862-0.072000.000000.00152excludedHepG2SRSF7
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.056000.001090.07515includedK562FMR1
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.111000.000000.00000includedK562AQR
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.083000.000000.00001includedHepG2LARP4
RIAPEX1ENSG00000100823.7chr14+2092373620924260209237362092386220924072209242600.057000.000000.00066includedHepG2XRN2
MXEAPEX1ENSG00000100823.7chr14+20923736209238622092407220924260209233842092348720924826209250190.054000.000720.015411includedK562SRSF1
MXEAPEX1ENSG00000100823.7chr14+20923736209238622092407220924260209233842092348720924826209250190.065000.000030.012871includedK562WDR43
MXEAPEX1ENSG00000100823.7chr14+20923736209238622092407220924260209233842092348720924826209250190.065000.000020.003591includedHepG2SRSF7

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for APEX1 is not avaliable on ENCORE database.