MAGEB2

General Information

Gene Name       : MAGEB2
Gene ID             : ENSG00000099399.5
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MAGEB2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MAGEB2ENSG00000099399.50.000.000.00ENCSR000AEF
HepG2MAGEB2ENSG00000099399.50.000.040.02ENCSR985KAT
K562MAGEB2ENSG00000099399.583.6094.9989.29ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MAGEB2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MAGEB2 RNA is bound by 8 proteins.  







eCLIP assay for MAGEB2 is not avaliable on ENCORE database.





8 proteins are bound to MAGEB2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX3023790530238032+3'-UTR4.9083812.77284HepG2SUB1
chrX3023669230236719+3'-UTR,CDS,intron-Proximal3.6164111.64245K562DDX3X
chrX3023783630237906+3'-UTR5.033189.01438K562TIA1
chrX3023799030238051+3'-UTR4.0591412.35914K562PABPC4
chrX3023368830233774+5'-UTR,intron-Proximal4.5174424.36722K562DDX3X
chrX3023371630233773+5'-UTR,intron-Proximal4.161733.84029K562DROSHA
chrX3023372430233773+5'-UTR,intron-Proximal3.042143.99208K562FTO
chrX3023747430237511+CDS6.3336118.88282K562LIN28B
chrX3023722230237294+CDS3.330083.14823K562SND1
chrX3023671930236759+CDS3.481607.89340K562DDX3X
chrX3023751130237556+CDS3.464903.98140K562LIN28B
chrX3023746530237474+CDS5.406109.64995K562LIN28B
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MAGEB2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MAGEB2 is not available on ENCORE database.

  • 37 RBPs can affect the levels of MAGEB2.  








The Knockdown/knockout RNA-Seq assay for MAGEB2 is not available on ENCORE database.





37 RBPs can affect the gene expression of MAGEB2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MAGEB2ENSG00000099399.520.877300.0000099999.999904.311503.35130HepG2CNOT7
MAGEB2ENSG00000099399.51084.760201261.84490-0.218201.968201.47400K562AGGF1
MAGEB2ENSG00000099399.51437.889101174.823400.291402.988001.41830K562AKAP1
MAGEB2ENSG00000099399.51582.788101312.988000.269501.862601.32200K562AKAP8L
MAGEB2ENSG00000099399.52158.198202613.83320-0.276302.391501.83970K562AQR
MAGEB2ENSG00000099399.51800.766801377.605000.386304.839203.59550K562ATP5C1
MAGEB2ENSG00000099399.51399.457101684.94250-0.267802.739701.43600K562BCCIP
MAGEB2ENSG00000099399.5997.659201312.99460-0.396203.020302.10700K562BOP1
MAGEB2ENSG00000099399.5670.07390922.94350-0.461903.818202.53880K562CCAR1
MAGEB2ENSG00000099399.51008.786001427.69380-0.501108.227405.96280K562DDX27
MAGEB2ENSG00000099399.51594.412202221.28800-0.478409.164608.06260K562DDX47
MAGEB2ENSG00000099399.5797.824501033.19090-0.373002.592001.31010K562DHX30
MAGEB2ENSG00000099399.51700.050601412.987000.266702.591501.74830K562DKC1
MAGEB2ENSG00000099399.51039.729501416.22900-0.445805.761004.62640K562EIF3G
MAGEB2ENSG00000099399.52199.813203022.53190-0.458408.600306.97150K562EIF4G2
MAGEB2ENSG00000099399.51967.100801470.887000.419304.222703.15790K562FIP1L1
MAGEB2ENSG00000099399.5891.757801179.26980-0.403202.798401.66500K562FKBP4
MAGEB2ENSG00000099399.51720.742201293.217400.412005.714704.89030K562FXR1
MAGEB2ENSG00000099399.53212.109202376.619600.434505.346704.29050K562GRSF1
MAGEB2ENSG00000099399.51162.590901801.04290-0.631504.159502.21130K562HNRNPAB
MAGEB2ENSG00000099399.5883.937201358.86660-0.620407.891506.93180K562HNRNPC
MAGEB2ENSG00000099399.5672.31120931.93730-0.471103.727302.00850K562KHDRBS1
MAGEB2ENSG00000099399.51538.875201743.22720-0.179902.105701.44490K562NSUN2
MAGEB2ENSG00000099399.5919.691601439.31760-0.646202.852601.84290K562PABPN1
MAGEB2ENSG00000099399.52004.774501560.501700.361303.338602.26360K562PCBP2
MAGEB2ENSG00000099399.51966.804301562.402100.332003.549402.63520K562POLR2G
MAGEB2ENSG00000099399.52100.551601669.937600.330902.779301.95680K562PPIG
MAGEB2ENSG00000099399.51559.280701268.743100.297402.813602.21610K562RBM15
MAGEB2ENSG00000099399.51310.534101633.93990-0.318202.505701.70930K562RBM22
MAGEB2ENSG00000099399.5948.227201230.61430-0.376103.332301.85890K562RBM25
MAGEB2ENSG00000099399.51612.849001111.386400.537207.022505.43910K562RCC2
MAGEB2ENSG00000099399.51326.333401630.78700-0.298102.518701.74260K562TIA1
MAGEB2ENSG00000099399.51036.608801600.24400-0.626407.787805.71620K562TRA2A
MAGEB2ENSG00000099399.51008.418001244.73790-0.303702.162801.34210K562TRIM56
MAGEB2ENSG00000099399.54559.608503718.158700.294203.221601.69860K562UBE2L3
MAGEB2ENSG00000099399.51123.155501581.60070-0.493805.984704.66950K562WDR3
MAGEB2ENSG00000099399.51159.307701644.68530-0.5045010.357708.83980K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MAGEB2 is not available on ENCORE database.





1 RBPs can affect the splicing of MAGEB2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A5SSMAGEB2ENSG00000099399.5chrX+3023367630233869302336763023377230236692302382060.065000.000000.00032longerK562HNRNPK

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MAGEB2 is not avaliable on ENCORE database.