ACTR1A

General Information

Gene Name       : ACTR1A
Gene ID             : ENSG00000138107.12
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: ACTR1A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ACTR1AENSG00000138107.1236.7852.9944.89ENCSR000AEF
HepG2ACTR1AENSG00000138107.1254.2449.7351.98ENCSR985KAT
K562ACTR1AENSG00000138107.1243.4640.9942.23ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ACTR1A is not avaliable on ENCORE database.



Proteins bound to RNA
  • ACTR1A RNA is bound by 15 proteins.  







eCLIP assay for ACTR1A is not avaliable on ENCORE database.





15 proteins are bound to ACTR1A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr10104240271104240314-3'-UTR,intron-Distal,intron-Proximal3.753805.39448HepG2AKAP1
chr10104240457104240515-3'-UTR,intron-Distal,intron-Proximal4.570718.31731HepG2SUB1
chr10104240356104240443-3'-UTR,intron-Distal6.2377035.94228K562UPF1
chr10104240212104240245-3'-UTR,intron-Distal,intron-Proximal4.337133.18753K562AKAP1
chr10104240441104240561-3'-UTR,intron-Distal,intron-Proximal4.3828410.64078K562PABPC4
chr10104240194104240315-3'-UTR,intron-Distal,intron-Proximal5.2701516.83940HepG2UPF1
chr10104240272104240323-3'-UTR,intron-Distal,intron-Proximal6.1435714.12857K562UPF1
chr10104240431104240521-3'-UTR,intron-Distal,intron-Proximal4.7074918.92797HepG2UPF1
chr10104239153104239203-3'-UTR,intron-Distal4.5234112.76076K562UPF1
chr10104239706104239770-3'-UTR,intron-Distal6.9138527.90604K562UPF1
chr10104239716104239777-3'-UTR,intron-Distal5.002697.94456HepG2UPF1
chr10104239394104239443-3'-UTR,intron-Distal3.465104.26759HepG2AKAP1
chr10104240126104240191-3'-UTR,intron-Distal4.9257818.64197K562UPF1
chr10104239508104239562-3'-UTR,intron-Distal5.2844024.61917K562UPF1
chr10104239154104239191-3'-UTR,intron-Distal3.456003.68605HepG2AKAP1
chr10104240209104240272-3'-UTR,intron-Distal,intron-Proximal4.9306415.85891K562UPF1
chr10104239405104239586-3'-UTR,intron-Distal3.248575.59934K562FAM120A
chr10104240421104240537-3'-UTR,intron-Distal,intron-Proximal5.1135331.46405K562TARDBP
chr10104240071104240112-3'-UTR,intron-Distal4.6500015.52312K562UPF1
chr10104239363104239484-3'-UTR,intron-Distal5.3844139.24855K562UPF1
chr10104240444104240543-3'-UTR,intron-Distal,intron-Proximal5.1586454.76030K562UPF1
chr10104240205104240271-3'-UTR,intron-Distal,intron-Proximal4.7228412.41865HepG2AKAP1
chr10104239779104239840-3'-UTR,intron-Distal5.4303629.23098K562UPF1
chr10104240440104240521-3'-UTR,intron-Distal,intron-Proximal4.379586.78914K562AKAP1
chr10104240436104240520-3'-UTR,intron-Distal,intron-Proximal4.3906520.53043HepG2AKAP1
chr10104239790104239836-3'-UTR,intron-Distal4.899904.39606K562AKAP1
chr10104240453104240566-3'-UTR,intron-Distal,intron-Proximal3.159906.24060HepG2LARP4
chr10104240333104240431-3'-UTR,intron-Distal,intron-Proximal4.6342011.02367HepG2UPF1
chr10104239720104239758-3'-UTR,intron-Distal4.639066.49490HepG2AKAP1
chr10104240445104240530-3'-UTR,intron-Distal,intron-Proximal3.005538.46006HepG2DDX55
chr10104239386104239475-3'-UTR,intron-Distal5.4133010.01142HepG2UPF1
chr10104239787104239835-3'-UTR,intron-Distal3.732273.68605HepG2AKAP1
chr10104250316104250372-3'-UTR,CDS,intron-Distal,intron-Proximal3.789907.20164K562DDX3X
chr10104240432104240517-3'-UTR,intron-Distal,intron-Proximal3.4417110.77874K562EIF4G2
chr10104240412104240508-3'-UTR,intron-Distal,intron-Proximal3.5639613.06335K562DDX55
chr10104240396104240436-3'-UTR,intron-Distal4.911127.27295HepG2AKAP1
chr10104239518104239566-3'-UTR,intron-Distal4.616824.78313HepG2UPF1
chr10104262353104262466-5'-UTR,CDS,intron-Distal,intron-Proximal3.8347410.49508K562DDX3X
chr10104262356104262464-5'-UTR,CDS,intron-Distal,intron-Proximal5.795686.75859HepG2DDX3X
chr10104243965104244067-CDS,intron-Distal3.868116.42513K562YBX3
chr10104245377104245411-CDS,intron-Distal3.242843.07714K562YBX3
chr10104241826104241885-CDS,intron-Distal3.138643.09884K562LIN28B
chr10104241517104241600-CDS,intron-Distal,intron-Proximal4.315227.79098HepG2PRPF8
chr10104247905104247944-CDS,intron-Distal,intron-Proximal3.172165.79072K562YBX3
chr10104243841104243922-CDS,intron-Distal,intron-Proximal4.681374.48002K562AQR
chr10104241679104241749-intron-Distal,intron-Proximal4.091263.74254HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ACTR1A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ACTR1A is not available on ENCORE database.

  • 74 RBPs can affect the levels of ACTR1A.  








The Knockdown/knockout RNA-Seq assay for ACTR1A is not available on ENCORE database.





74 RBPs can affect the gene expression of ACTR1A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ACTR1AENSG00000138107.72034.233401592.835800.352806.021405.19300HepG2ACO1
ACTR1AENSG00000138107.71015.976201435.97190-0.499204.665103.41360HepG2ADAR
ACTR1AENSG00000138107.73889.578102203.624100.8196010.481009.51180HepG2AKAP1
ACTR1AENSG00000138107.72312.697601812.558800.351402.417901.44140HepG2AKAP8
ACTR1AENSG00000138107.71611.012701304.749300.304102.947002.15360HepG2CALR
ACTR1AENSG00000138107.72822.518401732.278900.704209.583408.21710HepG2CIRBP
ACTR1AENSG00000138107.71827.340101592.443000.198402.328401.71010HepG2CKAP4
ACTR1AENSG00000138107.72540.702702009.276300.338504.874004.06470HepG2CELF1
ACTR1AENSG00000138107.72569.262302160.538100.249903.949003.08850HepG2DAZAP1
ACTR1AENSG00000138107.71877.163301474.592500.348104.345702.91500HepG2DDX1
ACTR1AENSG00000138107.71533.758301248.610300.296602.251301.63200HepG2DDX21
ACTR1AENSG00000138107.74471.198302110.922801.0827020.7274019.18070HepG2DDX3X
ACTR1AENSG00000138107.72615.578901456.649300.844409.655208.31360HepG2DDX55
ACTR1AENSG00000138107.72279.694201813.284800.330102.087201.54390HepG2DDX6
ACTR1AENSG00000138107.71031.911401394.59490-0.434504.152902.96520HepG2DHX30
ACTR1AENSG00000138107.71404.090001029.939800.447003.618902.59260HepG2EIF3D
ACTR1AENSG00000138107.72403.664201926.456300.319201.951901.41120HepG2EIF4A3
ACTR1AENSG00000138107.71543.681202041.79510-0.403503.783202.84050HepG2EIF4G2
ACTR1AENSG00000138107.72216.229301556.443800.509806.814705.50610HepG2EWSR1
ACTR1AENSG00000138107.72908.196201932.745200.589406.033904.93970HepG2FIP1L1
ACTR1AENSG00000138107.71160.13150917.007000.339202.148501.36450HepG2GEMIN5
ACTR1AENSG00000138107.7891.186901459.74530-0.711909.796608.69030HepG2HNRNPA1
ACTR1AENSG00000138107.72465.573701985.561300.312304.429003.29610HepG2HNRNPA2B1
ACTR1AENSG00000138107.72028.854701623.744200.321202.719202.03140HepG2HNRNPC
ACTR1AENSG00000138107.71914.328401504.823100.347102.644002.02640HepG2HNRNPLL
ACTR1AENSG00000138107.72502.396901832.777500.449204.228803.41010HepG2IGF2BP2
ACTR1AENSG00000138107.71856.830301647.623600.172402.053201.41060HepG2ILF2
ACTR1AENSG00000138107.71560.775401955.22370-0.325101.989701.45000HepG2MATR3
ACTR1AENSG00000138107.73395.299802001.288100.7625010.131508.96290HepG2NCBP2
ACTR1AENSG00000138107.7738.648201477.27070-1.000007.939706.38820HepG2PABPC1
ACTR1AENSG00000138107.71840.166601596.539900.204802.059601.31960HepG2PARN
ACTR1AENSG00000138107.7715.214401349.06890-0.915508.124706.44260HepG2PCBP2
ACTR1AENSG00000138107.72510.589301844.068200.445008.280007.43880HepG2PTBP1
ACTR1AENSG00000138107.72516.468802170.908500.213003.028602.41390HepG2PUM1
ACTR1AENSG00000138107.71766.347102169.33750-0.296503.077602.36950HepG2PUM2
ACTR1AENSG00000138107.72307.759101622.399800.5083012.1370011.00430HepG2PUS1
ACTR1AENSG00000138107.72139.805801301.482500.717204.619603.72120HepG2RAVER1
ACTR1AENSG00000138107.73507.068502306.758600.6043014.8176013.81200HepG2RBM22
ACTR1AENSG00000138107.72904.579202420.392000.263002.190401.57350HepG2RPLP0
ACTR1AENSG00000138107.71414.235001002.251100.496705.420304.59270HepG2RPS19
ACTR1AENSG00000138107.71666.105101111.110800.584404.674103.68290HepG2RRP9
ACTR1AENSG00000138107.72568.836601712.326700.585104.896003.98260HepG2SF3A3
ACTR1AENSG00000138107.71506.820601960.85470-0.380007.214006.16450HepG2SLBP
ACTR1AENSG00000138107.72223.848101675.066900.408707.349806.37950HepG2SMN1
ACTR1AENSG00000138107.71813.200201329.166700.447902.819001.85320HepG2SMNDC1
ACTR1AENSG00000138107.7726.959201657.31050-1.1889012.8184011.15230HepG2SNRNP70
ACTR1AENSG00000138107.73679.298102605.399300.4978013.6936012.80480HepG2SRFBP1
ACTR1AENSG00000138107.72672.735102004.044100.415308.250207.53320HepG2SRSF1
ACTR1AENSG00000138107.71269.180901630.35760-0.361305.544804.81060HepG2SRSF9
ACTR1AENSG00000138107.73012.343502296.388800.391408.690307.69120HepG2SUCLG1
ACTR1AENSG00000138107.7796.571201581.35860-0.9893028.9655027.38040HepG2TRIM56
ACTR1AENSG00000138107.71230.550001653.33910-0.426103.698502.97550HepG2U2AF1
ACTR1AENSG00000138107.72846.789202114.728800.428803.477502.53560HepG2UBE2L3
ACTR1AENSG00000138107.7680.93180856.44970-0.330902.184301.50890HepG2UCHL5
ACTR1AENSG00000138107.72031.590501466.121400.470509.285408.29480HepG2UTP3
ACTR1AENSG00000138107.72060.338201431.676100.525103.541202.34100HepG2XRCC6
ACTR1AENSG00000138107.71916.706901505.462300.348306.053205.12040HepG2ZC3H8
ACTR1AENSG00000138107.72773.998201670.138400.7319029.9433028.63850HepG2ZNF622
ACTR1AENSG00000138107.71362.634202134.23690-0.647306.874506.01670K562AQR
ACTR1AENSG00000138107.71120.882701386.02260-0.306303.265901.81430K562BCCIP
ACTR1AENSG00000138107.7676.64800953.76300-0.495203.954602.91050K562BOP1
ACTR1AENSG00000138107.7676.07300870.60430-0.364802.438701.46110K562CCAR1
ACTR1AENSG00000138107.7838.476001016.20790-0.277402.275501.33620K562CSTF2
ACTR1AENSG00000138107.71445.729201910.90260-0.402506.413005.47860K562DDX47
ACTR1AENSG00000138107.71367.820301822.07180-0.413706.038305.03710K562EIF2S2
ACTR1AENSG00000138107.71078.39510818.922300.397003.695502.78540K562EIF3G
ACTR1AENSG00000138107.72093.243302603.77330-0.314903.870902.76230K562EIF4G2
ACTR1AENSG00000138107.7874.550101170.56130-0.420602.975501.79820K562FKBP4
ACTR1AENSG00000138107.71481.319601078.943500.457206.479705.61000K562FXR1
ACTR1AENSG00000138107.7491.56500822.86980-0.743305.760204.65580K562G3BP2
ACTR1AENSG00000138107.71950.142802428.09970-0.316202.964002.18260K562GRSF1
ACTR1AENSG00000138107.7940.041001668.72770-0.8280015.3672013.15030K562HNRNPA1
ACTR1AENSG00000138107.71075.751101349.23840-0.326802.062801.53660K562HNRNPC
ACTR1AENSG00000138107.7548.22990826.73560-0.592603.883502.76190K562KRR1
ACTR1AENSG00000138107.71286.298501036.029300.312102.665401.45970K562NCBP2
ACTR1AENSG00000138107.71464.216901743.85710-0.252203.742702.89000K562NSUN2
ACTR1AENSG00000138107.71017.691901734.91140-0.769605.312203.58520K562PABPC1
ACTR1AENSG00000138107.7654.432601051.35380-0.683908.058906.36120K562PCBP2
ACTR1AENSG00000138107.71506.418001921.56740-0.351202.493201.70490K562PCBP3
ACTR1AENSG00000138107.71582.078101148.136400.462405.530404.61910K562PTBP1
ACTR1AENSG00000138107.72452.298902960.77900-0.271803.003002.00650K562PUM2
ACTR1AENSG00000138107.71929.231301572.078000.295302.345601.83730K562PUS1
ACTR1AENSG00000138107.7700.62050958.95970-0.452803.705202.22160K562SLBP
ACTR1AENSG00000138107.71456.652601125.603000.371903.574902.77750K562SRSF1
ACTR1AENSG00000138107.7853.269201235.75680-0.534304.986703.62740K562TRIM56
ACTR1AENSG00000138107.7576.00290823.77960-0.516205.292004.18640K562U2AF2
ACTR1AENSG00000138107.7771.336101144.49370-0.569305.349303.89080K562UCHL5
ACTR1AENSG00000138107.71460.431001839.29020-0.332802.456301.33080K562UTP3
ACTR1AENSG00000138107.71839.318802404.53260-0.386603.321902.36540K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ACTR1A is not available on ENCORE database.





7 RBPs can affect the splicing of ACTR1A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEACTR1AENSG00000138107.7chr10-104241757104241932104240888104240929104242767104242860-0.121000.000160.04478excludedHepG2DKC1
SEACTR1AENSG00000138107.7chr10-104250305104250370104248819104248895104262356104262435-0.056000.002950.03465excludedHepG2U2AF2
SEACTR1AENSG00000138107.7chr10-104241757104241932104240888104240929104242767104242860-0.143000.000030.00180excludedHepG2SF3A3
SEACTR1AENSG00000138107.7chr10-104241757104241932104240888104240929104242767104242860-0.119000.000990.04776excludedHepG2PCBP1
A3SSACTR1AENSG00000138107.7chr10-1042405511042407891042405511042407221042408881042409540.102000.000000.00000longerK562AQR
A3SSACTR1AENSG00000138107.7chr10-1042427671042429541042427671042428601042439161042441330.057000.001850.01200longerK562AQR
MXEACTR1AENSG00000138107.7chr10-1042417571042419321042427671042428861042415931042416551042439161042441330.062000.001570.013491includedK562AQR
MXEACTR1AENSG00000138107.7chr10-1042417571042419321042427671042429541042408881042409291042439161042441330.470000.011620.071501includedK562AQR
MXEACTR1AENSG00000138107.7chr10-104241593104241655104241757104241932104240888104240929104242767104242860-0.100000.005140.083872includedHepG2DDX55
MXEACTR1AENSG00000138107.7chr10-104241593104241655104241757104241932104240888104240929104242767104242860-0.162000.000220.014022includedK562TAF15

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ACTR1A is not avaliable on ENCORE database.