NDUFA8

General Information

Gene Name       : NDUFA8
Gene ID             : ENSG00000119421.6
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: NDUFA8)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NDUFA8ENSG00000119421.652.5764.1758.37ENCSR000AEF
HepG2NDUFA8ENSG00000119421.674.6078.0776.33ENCSR985KAT
K562NDUFA8ENSG00000119421.6143.30137.06140.18ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NDUFA8 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NDUFA8 RNA is bound by 9 proteins.  







eCLIP assay for NDUFA8 is not avaliable on ENCORE database.





9 proteins are bound to NDUFA8 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr9124906349124906504-3'-UTR,intron-Distal6.5371516.77041HepG2SUB1
chr9124906478124906536-3'-UTR,CDS,intron-Distal3.895895.76576K562PABPC4
chr9124906472124906538-3'-UTR,CDS,intron-Distal3.850735.76765HepG2LARP4
chr9124921905124922034-5'-UTR,CDS,intron-Distal4.8516868.57616K562DDX3X
chr9124921904124922005-5'-UTR,CDS,intron-Distal3.872958.13606K562UCHL5
chr9124921905124921998-5'-UTR,CDS,intron-Distal3.6373313.78383HepG2DDX3X
chr9124921911124922034-5'-UTR,CDS,intron-Distal3.177273.53349HepG2NCBP2
chr9124921905124922005-5'-UTR,CDS,intron-Distal3.058489.94907K562DROSHA
chr9124910401124910511-CDS,intron-Distal4.562224.61933HepG2LARP4
chr9124914630124914685-CDS,intron-Distal3.4083717.28467K562DDX3X
chr9124906549124906621-CDS,intron-Distal3.342359.11396K562YBX3
chr9124914521124914541-CDS,intron-Distal,intron-Proximal3.9741415.21546K562YBX3
chr9124906561124906641-CDS,intron-Distal4.057304.08796K562SND1
chr9124914541124914552-CDS,intron-Distal3.282607.33020K562YBX3
chr9124910551124910556-CDS,intron-Distal3.563405.95282K562YBX3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NDUFA8 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NDUFA8 is not available on ENCORE database.

  • 66 RBPs can affect the levels of NDUFA8.  








The Knockdown/knockout RNA-Seq assay for NDUFA8 is not available on ENCORE database.





66 RBPs can affect the gene expression of NDUFA8 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NDUFA8ENSG00000119421.51551.789101224.978200.341101.956301.50010HepG2AKAP1
NDUFA8ENSG00000119421.5525.44610640.44770-0.285502.004401.33760HepG2AKAP8L
NDUFA8ENSG00000119421.5202.15820300.49140-0.571802.861102.16420HepG2CPSF6
NDUFA8ENSG00000119421.51135.50440930.099400.287802.810402.16320HepG2CELF1
NDUFA8ENSG00000119421.5202.63510341.22910-0.751903.030902.00870HepG2DDX59
NDUFA8ENSG00000119421.5756.321801070.71550-0.501503.577702.85320HepG2EIF4A3
NDUFA8ENSG00000119421.5640.640901042.66080-0.702705.056204.14500HepG2EIF4B
NDUFA8ENSG00000119421.5436.43770582.56040-0.416602.603901.54240HepG2ESF1
NDUFA8ENSG00000119421.5869.273601112.10930-0.355404.153303.44250HepG2ETF1
NDUFA8ENSG00000119421.5479.66940710.33890-0.566505.013103.96800HepG2FUBP3
NDUFA8ENSG00000119421.5703.610201002.25080-0.510403.805903.02940HepG2G3BP1
NDUFA8ENSG00000119421.5785.971601064.20180-0.437203.226402.26270HepG2G3BP2
NDUFA8ENSG00000119421.5449.79390592.81660-0.398302.372401.72490HepG2HNRNPC
NDUFA8ENSG00000119421.5698.888001015.19870-0.538604.774603.87790HepG2HNRNPK
NDUFA8ENSG00000119421.5630.143301018.71590-0.693006.726405.71630HepG2IGF2BP2
NDUFA8ENSG00000119421.5672.720101024.74790-0.607204.252102.98470HepG2KHSRP
NDUFA8ENSG00000119421.5770.312101080.95340-0.488803.679802.92430HepG2MAGOH
NDUFA8ENSG00000119421.5833.139801112.52840-0.417202.781902.14750HepG2NCBP2
NDUFA8ENSG00000119421.5580.99690358.850400.695003.485702.48120HepG2PABPC1
NDUFA8ENSG00000119421.5720.03010990.61630-0.460303.298402.51370HepG2PABPC4
NDUFA8ENSG00000119421.5696.140801092.19950-0.6498011.1504010.06540HepG2PCBP1
NDUFA8ENSG00000119421.5682.561301111.37840-0.7033012.5440011.54540HepG2PTBP1
NDUFA8ENSG00000119421.5788.896201004.82720-0.349002.314001.76190HepG2PUM1
NDUFA8ENSG00000119421.5722.352001004.04390-0.475003.842203.05520HepG2PUM2
NDUFA8ENSG00000119421.5819.399501203.59790-0.554707.213406.27500HepG2QKI
NDUFA8ENSG00000119421.5455.98780929.52230-1.0275018.6865017.58350HepG2RBM22
NDUFA8ENSG00000119421.5748.636101092.36230-0.545105.924904.97190HepG2RBM25
NDUFA8ENSG00000119421.5746.303501236.83710-0.7288013.6034012.57230HepG2NELFE
NDUFA8ENSG00000119421.5602.809001151.98260-0.9343020.7527019.33310HepG2RECQL
NDUFA8ENSG00000119421.5759.736301157.04440-0.606909.715308.70680HepG2SF3B4
NDUFA8ENSG00000119421.5812.564901207.72180-0.571709.257508.50550HepG2SRSF1
NDUFA8ENSG00000119421.5497.66300673.08020-0.435603.973203.16130HepG2SRSF7
NDUFA8ENSG00000119421.5559.40120982.56150-0.8127016.3689015.22830HepG2SRSF9
NDUFA8ENSG00000119421.5823.041401062.84190-0.368902.575601.97100HepG2SUCLG1
NDUFA8ENSG00000119421.5646.978301085.59730-0.7467012.2058011.15650HepG2TAF15
NDUFA8ENSG00000119421.5568.61060425.408600.418502.328401.40710HepG2TFIP11
NDUFA8ENSG00000119421.5665.04970997.46310-0.584806.988505.66760HepG2TIA1
NDUFA8ENSG00000119421.5433.55760649.63070-0.583403.136501.57650HepG2TRA2A
NDUFA8ENSG00000119421.5796.41730624.765300.350102.050201.41850HepG2XRN2
NDUFA8ENSG00000119421.5406.01250514.70740-0.342202.499601.85580HepG2ZC3H8
NDUFA8ENSG00000119421.5410.02550646.40080-0.656704.256802.62190HepG2ZRANB2
NDUFA8ENSG00000119421.51959.663701580.504600.310104.052503.38930K562AGGF1
NDUFA8ENSG00000119421.51983.704001644.564900.270401.988201.43270K562AKAP8L
NDUFA8ENSG00000119421.51523.994602531.85950-0.7323011.3802010.30910K562AQR
NDUFA8ENSG00000119421.5569.65590771.89590-0.438302.959502.05630K562BOP1
NDUFA8ENSG00000119421.5582.60090830.37070-0.511204.341102.96290K562CCAR1
NDUFA8ENSG00000119421.5644.33900820.70480-0.349002.544801.79160K562CPSF6
NDUFA8ENSG00000119421.5702.46720929.58430-0.404202.807201.46890K562DHX30
NDUFA8ENSG00000119421.51459.282502023.39300-0.471508.088406.95710K562EIF2S2
NDUFA8ENSG00000119421.5469.68380844.63650-0.846605.476104.02470K562EIF3A
NDUFA8ENSG00000119421.52596.000803236.52040-0.318204.488703.30490K562EIF4G2
NDUFA8ENSG00000119421.5725.807201047.84020-0.529804.260802.81160K562FKBP4
NDUFA8ENSG00000119421.5510.34350707.88230-0.472002.972102.02290K562FTO
NDUFA8ENSG00000119421.51582.402001256.714400.332403.945303.24160K562FXR1
NDUFA8ENSG00000119421.5756.608501132.36470-0.581704.159203.25060K562G3BP2
NDUFA8ENSG00000119421.5543.58410783.53760-0.527503.982603.03500K562GPKOW
NDUFA8ENSG00000119421.5626.315501207.52320-0.9471015.7207014.38210K562HNRNPC
NDUFA8ENSG00000119421.51935.363701584.889900.288102.461101.47130K562HNRNPL
NDUFA8ENSG00000119421.51804.537602206.21890-0.289903.325902.34820K562HNRNPU
NDUFA8ENSG00000119421.5425.41270669.13130-0.653404.206603.03140K562KRR1
NDUFA8ENSG00000119421.51428.876601663.08940-0.219002.789102.04020K562NSUN2
NDUFA8ENSG00000119421.51818.217801106.933900.715903.423102.28800K562PABPN1
NDUFA8ENSG00000119421.52674.503703325.60830-0.314303.146401.61680K562PNPT1
NDUFA8ENSG00000119421.52336.034001493.962500.644803.682002.71410K562PPIG
NDUFA8ENSG00000119421.52597.834703531.32390-0.442904.725403.66240K562PUF60
NDUFA8ENSG00000119421.53033.795903680.26140-0.278703.441802.36900K562PUM2
NDUFA8ENSG00000119421.51953.162501589.144700.297503.079402.45930K562RBM15
NDUFA8ENSG00000119421.5999.322501518.91720-0.604007.338505.88520K562RBM22
NDUFA8ENSG00000119421.51260.066601641.11780-0.381205.000303.93100K562SF3A3
NDUFA8ENSG00000119421.5458.79280745.29430-0.700005.551104.14000K562SF3B1
NDUFA8ENSG00000119421.51212.612401472.61090-0.280302.832801.64760K562SRSF7
NDUFA8ENSG00000119421.5766.222601106.06490-0.529603.498902.41200K562TRIM56
NDUFA8ENSG00000119421.51360.721501763.41280-0.374005.794304.79840K562UPF1
NDUFA8ENSG00000119421.52326.540202852.18570-0.293902.568301.74290K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NDUFA8 is not available on ENCORE database.





13 RBPs can affect the splicing of NDUFA8 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENDUFA8ENSG00000119421.5chr9-124914523124914687124910390124910556124921905124922066-0.076000.000010.00117excludedK562PRPF8
SENDUFA8ENSG00000119421.5chr9-124914523124914687124910390124910556124921905124922066-0.083000.000040.00526excludedHepG2RBM22
SENDUFA8ENSG00000119421.5chr9-124914523124914687124910390124910556124921905124922066-0.071000.000010.00016excludedHepG2U2AF2
SENDUFA8ENSG00000119421.5chr9-124914523124914720124910390124910556124921905124922066-0.067000.000010.00408excludedK562APOBEC3C
SENDUFA8ENSG00000119421.5chr9-124914523124914687124910390124910556124921905124922066-0.061000.001690.04614excludedHepG2SF3A3
SENDUFA8ENSG00000119421.5chr9-124914523124914687124910390124910556124921905124922066-0.078000.000170.01741excludedHepG2TIAL1
SENDUFA8ENSG00000119421.5chr9-124914523124914687124910390124910556124921905124922066-0.060000.000190.04980excludedHepG2FUBP3
SENDUFA8ENSG00000119421.5chr9-124914523124914687124910390124910556124921905124922066-0.059000.000000.00057excludedK562HNRNPK
SENDUFA8ENSG00000119421.5chr9-124914523124914687124910390124910556124921905124922066-0.101000.000010.00105excludedHepG2HNRNPC
SENDUFA8ENSG00000119421.5chr9-1249145231249146871249103901249105561249219051249220660.086000.000000.00168includedHepG2PRPF4
SENDUFA8ENSG00000119421.5chr9-124914523124914687124910390124910556124921905124922066-0.095000.000000.00008excludedK562HNRNPC
MXENDUFA8ENSG00000119421.5chr9-124910390124910556124914523124914687124906336124906657124921905124922098-0.133000.000010.003242includedK562XRCC6
MXENDUFA8ENSG00000119421.5chr9-1249103901249105561249145231249146871249063361249066571249219051249220980.123000.000490.015071includedHepG2DDX55
MXENDUFA8ENSG00000119421.5chr9-124910390124910556124914523124914687124906336124906657124921905124922098-0.086000.000770.062202includedK562PUM1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NDUFA8 is not avaliable on ENCORE database.