RASGRF1

General Information

Gene Name       : RASGRF1
Gene ID             : ENSG00000058335.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RASGRF1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RASGRF1ENSG00000058335.150.980.730.85ENCSR000AEF
HepG2RASGRF1ENSG00000058335.150.450.340.40ENCSR985KAT
K562RASGRF1ENSG00000058335.150.030.110.07ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RASGRF1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RASGRF1 RNA is bound by 4 proteins.  







eCLIP assay for RASGRF1 is not avaliable on ENCORE database.





4 proteins are bound to RASGRF1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr157928593179286026-intron-Distal5.440789.60347HepG2AGGF1
chr157928549279285580-intron-Distal4.911833.70058HepG2XPO5
chr157929580279295828-intron-Distal4.500984.80399K562EXOSC5
chr157928562779285706-intron-Distal3.633437.90024HepG2AGGF1
chr157928560779285678-intron-Distal6.2295521.46541HepG2HNRNPL
chr157928592679285982-intron-Distal4.762054.22343HepG2XPO5
chr157928581079285854-intron-Distal4.019934.45128HepG2HNRNPL
chr157928567879285713-intron-Distal6.3488820.61486HepG2HNRNPL
chr157928574579285818-intron-Distal3.163936.92727HepG2AGGF1
chr157928571379285810-intron-Distal5.0918635.24412HepG2HNRNPL
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RASGRF1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RASGRF1 is not available on ENCORE database.

  • 29 RBPs can affect the levels of RASGRF1.  








The Knockdown/knockout RNA-Seq assay for RASGRF1 is not available on ENCORE database.





29 RBPs can affect the gene expression of RASGRF1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RASGRF1ENSG00000058335.1176.9440022.962901.744405.366004.28950HepG2ASCC1
RASGRF1ENSG00000058335.1157.4775015.951301.849204.660303.90780HepG2BOP1
RASGRF1ENSG00000058335.1150.2307013.758301.868203.680202.40770HepG2CPSF7
RASGRF1ENSG00000058335.112.9796016.57880-2.476102.306101.67910HepG2DDX21
RASGRF1ENSG00000058335.112.1363024.25980-3.505404.414903.61080HepG2EIF4A3
RASGRF1ENSG00000058335.1131.1726010.914301.514002.519601.58360HepG2HDGF
RASGRF1ENSG00000058335.1139.3132011.782401.738302.886201.47800HepG2HLTF
RASGRF1ENSG00000058335.111.4208019.40960-3.772003.420402.71080HepG2HNRNPA1
RASGRF1ENSG00000058335.115.6987021.59090-1.921701.923601.33370HepG2HNRNPC
RASGRF1ENSG00000058335.113.8287024.48900-2.677203.475002.73800HepG2MAGOH
RASGRF1ENSG00000058335.1144.9906015.948801.496102.769901.88140HepG2PABPC1
RASGRF1ENSG00000058335.1151.4769022.444801.197402.421601.74260HepG2PABPC4
RASGRF1ENSG00000058335.1194.2492022.847802.044308.213607.22530HepG2QKI
RASGRF1ENSG00000058335.1165.4112020.062601.704905.039203.92460HepG2RBM15
RASGRF1ENSG00000058335.114.9636023.48130-2.242002.635902.10540HepG2NELFE
RASGRF1ENSG00000058335.112.2736012.04980-2.406002.025501.44740HepG2SF3A3
RASGRF1ENSG00000058335.1194.3607017.442202.435508.384507.02780HepG2SNRNP70
RASGRF1ENSG00000058335.1147.7189022.350001.094202.053301.60180HepG2SRFBP1
RASGRF1ENSG00000058335.11107.4950016.871302.6715010.958708.86200HepG2SRSF3
RASGRF1ENSG00000058335.1157.1000020.462101.480403.602702.90530HepG2SRSF5
RASGRF1ENSG00000058335.1144.2635018.654501.246502.591602.05390HepG2SRSF9
RASGRF1ENSG00000058335.113.2579019.40570-2.574502.858102.33900HepG2SSB
RASGRF1ENSG00000058335.1147.1531010.511802.165204.072902.59940HepG2SUB1
RASGRF1ENSG00000058335.1138.4424010.965501.809602.461901.81930HepG2SUPV3L1
RASGRF1ENSG00000058335.1158.5184020.613201.505203.794303.15520HepG2TAF15
RASGRF1ENSG00000058335.1187.2913021.027402.053509.366008.42250HepG2TRIM56
RASGRF1ENSG00000058335.1159.2493021.425001.467402.474901.68660HepG2UBE2L3
RASGRF1ENSG00000058335.1134.4027010.686201.686702.955802.23790HepG2UPF1
RASGRF1ENSG00000058335.1152.8873015.695001.752504.398803.00530HepG2XPO5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RASGRF1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RASGRF1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RASGRF1 is not avaliable on ENCORE database.