GHITM

General Information

Gene Name       : GHITM
Gene ID             : ENSG00000165678.20
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GHITM)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GHITMENSG00000165678.20119.87100.28110.08ENCSR000AEF
HepG2GHITMENSG00000165678.2092.33143.41117.87ENCSR985KAT
K562GHITMENSG00000165678.20242.21233.21237.71ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GHITM is not avaliable on ENCORE database.



Proteins bound to RNA
  • GHITM RNA is bound by 24 proteins.  







eCLIP assay for GHITM is not avaliable on ENCORE database.





24 proteins are bound to GHITM RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr108591249185912567+3'-UTR5.7784673.56637HepG2SUB1
chr108591206185912108+3'-UTR,CDS3.516264.08867HepG2LARP4
chr108591217585912202+3'-UTR3.8324917.25293HepG2SUB1
chr108591278985912822+3'-UTR7.0142516.77041HepG2SUB1
chr108591276685912821+3'-UTR3.949686.19964K562NOLC1
chr108591269385912757+3'-UTR3.5791014.51579K562UPF1
chr108591272185912790+3'-UTR3.979318.20012K562IGF2BP1
chr108591220285912225+3'-UTR3.822739.04215HepG2SUB1
chr108591256785912647+3'-UTR5.8412430.51602HepG2SUB1
chr108591227585912326+3'-UTR3.069214.07069K562IGF2BP1
chr108591259285912637+3'-UTR3.397707.67407K562LIN28B
chr108591211085912133+3'-UTR3.278769.38619HepG2SUB1
chr108591217185912233+3'-UTR3.8326912.92104K562NOLC1
chr108591235585912397+3'-UTR4.233558.60040K562NOLC1
chr108591234685912438+3'-UTR3.7559010.93655K562TARDBP
chr108591222585912272+3'-UTR5.7306139.36986HepG2SUB1
chr108591275785912830+3'-UTR3.2456412.91696K562UPF1
chr108591234885912408+3'-UTR5.6131514.70289HepG2SUB1
chr108591271985912818+3'-UTR4.6761873.48998K562PUM2
chr108591210085912125+3'-UTR,CDS3.886768.73343K562LIN28B
chr108591249185912543+3'-UTR3.1312219.16919K562PUM2
chr108589931885899349+5'-UTR3.8574811.64245K562DDX3X
chr108590121785901253+5'-UTR,intron-Proximal3.3598421.58401K562DDX3X
chr108590125385901299+5'-UTR,CDS3.0811426.18542K562DDX3X
chr108590125485901306+5'-UTR,CDS4.060215.32728HepG2DDX3X
chr108590994285909996+CDS3.240645.31732K562METAP2
chr108591059185910610+CDS3.1335114.59642K562YBX3
chr108590135685901381+CDS4.2271132.55660K562YBX3
chr108590986085909921+CDS4.992807.91835HepG2RPS3
chr108590848885908534+CDS3.227744.81603K562BUD13
chr108590376685903843+CDS3.144924.60423HepG2G3BP1
chr108590986385909941+CDS3.600176.57537HepG2G3BP1
chr108590234185902479+CDS,intron-Proximal3.405875.70176HepG2AQR
chr108591054385910591+CDS3.696434.31813HepG2G3BP1
chr108590993885909981+CDS3.9799711.84473K562LIN28B
chr108590852085908569+CDS4.752676.59389HepG2G3BP1
chr108590375085903817+CDS,intron-Proximal3.6352912.91693K562LIN28B
chr108590848685908520+CDS3.537904.86632HepG2G3BP1
chr108590463085904661+CDS,intron-Proximal4.4128119.92589K562LIN28B
chr108590241085902421+CDS,intron-Proximal3.6606623.95074K562YBX3
chr108590466585904728+CDS4.008157.10432HepG2G3BP1
chr108590848485908540+CDS,intron-Proximal4.4892529.45085K562RPS3
chr108591205485912100+CDS3.4662213.48584K562LIN28B
chr108590994085909986+CDS5.1253311.07772HepG2RPS3
chr108590980985909846+CDS,intron-Proximal4.7129219.31597K562RPS3
chr108590377085903806+CDS3.3315410.92369K562RPS3
chr108591053885910548+CDS3.4843115.12519K562YBX3
chr108590848885908540+CDS4.040365.18795HepG2RPS3
chr108590989585909928+CDS5.4844910.96987K562RPS3
chr108590848585908545+CDS,intron-Proximal4.740984.88201K562ZC3H11A
chr108590138185901385+CDS3.8914920.90654K562YBX3
chr108591046585910499+CDS4.6228817.25028HepG2SUB1
chr108591205185912095+CDS3.6197935.91553K562PABPC4
chr108590131385901341+CDS3.6769427.07823K562YBX3
chr108590854285908571+CDS3.1248513.58143K562YBX3
chr108590383985903862+CDS3.478897.45221K562LIN28B
chr108590132185901343+CDS3.995383.39686HepG2G3BP1
chr108591205885912095+CDS3.326236.36993K562SND1
chr108590250185902549+CDS,intron-Proximal3.359974.64824K562PRPF8
chr108590130085901388+CDS,intron-Proximal3.372268.50585HepG2GRWD1
chr108591049085910542+CDS3.109587.41492K562LIN28B
chr108590375185903850+CDS3.2775711.05660K562GRWD1
chr108590984185909921+CDS3.4654713.59760K562SND1
chr108590994385909995+CDS4.2769733.70228K562RPS3
chr108590129985901360+CDS3.4093528.45291K562DDX3X
chr108590134185901356+CDS4.0324721.75905K562YBX3
chr108590466185904683+CDS3.7167010.87979K562LIN28B
chr108590244485902475+CDS4.419384.42709HepG2G3BP1
chr108590468585904750+CDS3.2422311.52982K562SND1
chr108590375585903833+CDS4.077343.56485HepG2GRSF1
chr108591045285910516+CDS,intron-Proximal3.292195.70281HepG2U2AF2
chr108590131985901356+CDS3.498966.70305K562ZNF800
chr108590443085904524+intron-Distal4.045828.55611K562KHSRP
chr108590449985904568+intron-Distal,intron-Proximal3.827013.22073HepG2KHSRP
chr108590143985901514+intron-Distal,intron-Proximal3.008706.09777K562PRPF8
chr108591000185910033+intron-Proximal4.874884.09264K562AQR
chr108591000485910059+intron-Proximal4.545394.96013K562PRPF8
chr108590139185901433+intron-Proximal3.573867.70481K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GHITM is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GHITM is not available on ENCORE database.

  • 99 RBPs can affect the levels of GHITM.  








The Knockdown/knockout RNA-Seq assay for GHITM is not available on ENCORE database.





99 RBPs can affect the gene expression of GHITM :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GHITMENSG00000165678.152437.209903125.00360-0.358602.449801.56310HepG2ABCF1
GHITMENSG00000165678.152190.616802841.46700-0.375307.727506.81450HepG2ACO1
GHITMENSG00000165678.154364.532905798.08670-0.409703.187602.62140HepG2AKAP1
GHITMENSG00000165678.153809.193304797.51620-0.332802.632701.86720HepG2ASCC1
GHITMENSG00000165678.153625.794202821.136100.361904.202302.49450HepG2ATP5C1
GHITMENSG00000165678.153039.926604148.59760-0.448602.313701.43040HepG2CCAR1
GHITMENSG00000165678.152085.207202925.02190-0.488305.443304.50890HepG2CPSF6
GHITMENSG00000165678.151977.235402743.83780-0.4727011.154709.94370HepG2DNAJC2
GHITMENSG00000165678.153095.592102324.908600.412902.735001.63640HepG2AGO1
GHITMENSG00000165678.152644.913404586.75150-0.7943012.0743010.89060HepG2EIF2S1
GHITMENSG00000165678.152914.345502371.167300.297503.259601.98310HepG2EIF2S2
GHITMENSG00000165678.153715.868205069.10900-0.448003.701902.96610HepG2EIF4A3
GHITMENSG00000165678.156914.526405218.013500.4060010.024908.99680HepG2ETF1
GHITMENSG00000165678.152954.189602406.441300.295802.634901.51590HepG2FASTKD2
GHITMENSG00000165678.153649.893005113.88490-0.486605.146304.22370HepG2FXR1
GHITMENSG00000165678.153877.678705036.15300-0.377103.417502.42110HepG2G3BP2
GHITMENSG00000165678.151423.074201838.42510-0.369502.879001.96190HepG2GEMIN5
GHITMENSG00000165678.151701.223502710.68460-0.672105.348903.79670HepG2GRSF1
GHITMENSG00000165678.151843.332502794.64780-0.600409.156508.08080HepG2HNRNPA1
GHITMENSG00000165678.154679.152704050.089200.208202.723901.79480HepG2HNRNPA2B1
GHITMENSG00000165678.152460.733603241.18050-0.397404.340303.46450HepG2HNRNPF
GHITMENSG00000165678.151498.318102177.71940-0.539507.135905.71730HepG2HNRNPM
GHITMENSG00000165678.152613.998203154.30600-0.271105.396004.39960HepG2ILF2
GHITMENSG00000165678.152354.449605115.66740-1.1195022.3993020.63040HepG2MAGOH
GHITMENSG00000165678.152382.907103227.04700-0.437502.580701.64860HepG2MTPAP
GHITMENSG00000165678.153068.536604369.89600-0.510009.896908.48290HepG2NOL12
GHITMENSG00000165678.153685.416604689.80350-0.347702.719302.00330HepG2PABPC4
GHITMENSG00000165678.153381.955104509.49780-0.415109.674708.65080HepG2PCBP1
GHITMENSG00000165678.151292.714101707.50940-0.401504.744903.14970HepG2PKM
GHITMENSG00000165678.153055.023904588.55290-0.5869016.9501015.81680HepG2PTBP1
GHITMENSG00000165678.155353.808704171.448300.359903.319002.67460HepG2PUF60
GHITMENSG00000165678.153188.999104424.94210-0.472608.116806.99410HepG2PUM2
GHITMENSG00000165678.152094.053002894.23270-0.4669011.4796010.37160HepG2PUS1
GHITMENSG00000165678.153764.845704969.57940-0.400506.817305.90140HepG2QKI
GHITMENSG00000165678.155694.911502867.439200.989808.779207.56920HepG2RAVER1
GHITMENSG00000165678.154922.454004361.285300.174501.896601.44650HepG2RBM22
GHITMENSG00000165678.153310.180004510.18880-0.446306.421505.43410HepG2RBM25
GHITMENSG00000165678.152963.789805106.64350-0.7849031.4015029.99910HepG2NELFE
GHITMENSG00000165678.152890.508504756.09960-0.7185027.1175025.54280HepG2RECQL
GHITMENSG00000165678.151861.924702816.40190-0.597104.138502.98840HepG2RPS10
GHITMENSG00000165678.152352.435503187.92810-0.438504.466503.46260HepG2RPS2
GHITMENSG00000165678.152183.349102939.40520-0.429002.763901.96490HepG2RPS3A
GHITMENSG00000165678.155094.622103184.586100.677806.581705.51480HepG2SF3A3
GHITMENSG00000165678.151729.611404175.64770-1.271605.353703.37160HepG2SNRNP200
GHITMENSG00000165678.155222.211903485.009200.583402.431801.70140HepG2SNRNP70
GHITMENSG00000165678.154172.368004925.89630-0.239504.148503.57150HepG2SRFBP1
GHITMENSG00000165678.152589.736503184.23800-0.298103.575902.79900HepG2SRSF7
GHITMENSG00000165678.153673.826504684.09390-0.350508.890807.88250HepG2SUCLG1
GHITMENSG00000165678.155125.260704481.978300.193402.029801.53660HepG2TAF15
GHITMENSG00000165678.152534.482303084.04810-0.283102.217801.55900HepG2TARDBP
GHITMENSG00000165678.152727.249102105.472400.373203.188902.12330HepG2TFIP11
GHITMENSG00000165678.153455.057004118.39150-0.253402.467601.67560HepG2TIA1
GHITMENSG00000165678.153221.237002699.869700.254602.024601.47800HepG2U2AF1
GHITMENSG00000165678.153332.637202824.243200.238703.639202.85420HepG2UPF1
GHITMENSG00000165678.152353.561902726.69240-0.212302.848502.24430HepG2UTP3
GHITMENSG00000165678.151460.961503091.99480-1.0816012.1413010.64620HepG2XRN2
GHITMENSG00000165678.155445.042703106.123700.8097049.2176047.65410HepG2ZNF622
GHITMENSG00000165678.159320.6456012357.41590-0.406904.796603.16470K562ABCF1
GHITMENSG00000165678.1513347.3896015828.50740-0.246003.316202.30960K562ATP5C1
GHITMENSG00000165678.157732.095909119.58610-0.238103.361901.88630K562BCCIP
GHITMENSG00000165678.157209.742908812.42160-0.289606.082404.63950K562BCLAF1
GHITMENSG00000165678.156629.378008607.21190-0.376703.338401.74270K562BUD13
GHITMENSG00000165678.152988.681904409.00790-0.560907.394405.45490K562CCAR1
GHITMENSG00000165678.158255.5677014985.73530-0.860204.685603.25810K562CNOT7
GHITMENSG00000165678.159942.5408011715.31130-0.236703.331702.10910K562CPEB4
GHITMENSG00000165678.154784.339806685.53390-0.4827010.926008.65460K562CSTF2
GHITMENSG00000165678.156597.946407603.79530-0.204702.543401.38390K562DDX21
GHITMENSG00000165678.156479.305707522.39900-0.215403.101801.80800K562EIF2S1
GHITMENSG00000165678.153022.526804484.80020-0.569303.480302.34130K562EIF3A
GHITMENSG00000165678.156733.000507940.99830-0.238103.344902.47370K562EIF3G
GHITMENSG00000165678.154960.613907154.91750-0.528406.179504.96230K562EIF4A3
GHITMENSG00000165678.154911.910206443.38610-0.391506.631504.71690K562EIF4B
GHITMENSG00000165678.1513662.9424015724.25980-0.202702.780101.84000K562EIF4G2
GHITMENSG00000165678.155317.953306245.51040-0.231902.721401.44560K562EWSR1
GHITMENSG00000165678.154506.436106029.33250-0.420005.885803.99630K562EXOSC5
GHITMENSG00000165678.157096.365008560.66120-0.270603.788202.46210K562GLRX3
GHITMENSG00000165678.155284.927207077.11950-0.421302.045001.35900K562GPKOW
GHITMENSG00000165678.159374.4029014545.13080-0.6337010.254808.77710K562GRSF1
GHITMENSG00000165678.157914.476709346.28250-0.239902.454301.44460K562HNRNPA1
GHITMENSG00000165678.155568.330108083.10840-0.537703.741903.06050K562HNRNPC
GHITMENSG00000165678.155226.357307216.63260-0.465502.887201.72150K562HNRNPF
GHITMENSG00000165678.158945.9298010955.40460-0.292303.213902.06540K562HNRNPL
GHITMENSG00000165678.157925.3575010349.90130-0.385107.140005.70330K562HNRNPU
GHITMENSG00000165678.1520370.3981012043.120700.7582014.9280013.15750K562HSPD1
GHITMENSG00000165678.153055.318204451.94380-0.543106.306304.09480K562KHDRBS1
GHITMENSG00000165678.153738.838106041.98950-0.692404.408203.20270K562KRR1
GHITMENSG00000165678.156136.077808194.72430-0.417402.873801.38750K562LIN28B
GHITMENSG00000165678.157265.7147010194.50950-0.488607.583506.16690K562MAGOH
GHITMENSG00000165678.154853.162306907.89930-0.509302.712901.84690K562METAP2
GHITMENSG00000165678.154707.845009000.45150-0.9349056.0422053.32690K562MTPAP
GHITMENSG00000165678.157072.9584010000.12700-0.4996030.0535028.03110K562NSUN2
GHITMENSG00000165678.155910.854007956.14390-0.428702.825101.38690K562NUSAP1
GHITMENSG00000165678.159593.5801014396.84160-0.585602.685101.47070K562PABPC1
GHITMENSG00000165678.158226.641806868.071100.260302.304501.61790K562PRPF8
GHITMENSG00000165678.158394.979209904.49450-0.238602.394501.76950K562PTBP1
GHITMENSG00000165678.1514052.1323017879.77420-0.347507.207905.63150K562PUM2
GHITMENSG00000165678.1512625.9525014577.11280-0.207302.462601.89730K562RBM15
GHITMENSG00000165678.157094.206109498.03110-0.421005.080803.90280K562RBM22
GHITMENSG00000165678.155148.245306609.73080-0.360502.270801.37710K562RCC2
GHITMENSG00000165678.156357.739807820.55720-0.298805.978603.66600K562RPS10
GHITMENSG00000165678.158033.8732013648.88680-0.764603.587401.80240K562SBDS
GHITMENSG00000165678.159133.789107914.511300.206602.085201.34480K562SF3B4
GHITMENSG00000165678.153590.629304856.42690-0.435704.931403.21100K562SLBP
GHITMENSG00000165678.153346.992106266.06930-0.904707.218805.33250K562SRFBP1
GHITMENSG00000165678.155342.064806857.11740-0.360203.179101.41150K562SRP68
GHITMENSG00000165678.157123.5225010109.84510-0.5051022.0291019.79780K562SRPK2
GHITMENSG00000165678.158012.111109709.54160-0.277203.192702.43780K562SRSF1
GHITMENSG00000165678.1511370.4348014968.96820-0.396707.097004.87030K562SUCLG1
GHITMENSG00000165678.154037.215306651.29830-0.720307.328605.61860K562SUPV3L1
GHITMENSG00000165678.157127.579909827.04540-0.463305.449004.43930K562TARDBP
GHITMENSG00000165678.154383.727506970.57450-0.669104.536303.31430K562TIAL1
GHITMENSG00000165678.154872.873707402.95060-0.603304.170702.95920K562TRIM56
GHITMENSG00000165678.158364.0831010392.00210-0.313202.734401.36360K562TRIP6
GHITMENSG00000165678.155657.5606010603.36120-0.9063053.2787050.69060K562UPF1
GHITMENSG00000165678.156664.553008949.37520-0.425303.136301.85090K562UTP3
GHITMENSG00000165678.156801.718309072.93770-0.415706.096504.76560K562WDR3
GHITMENSG00000165678.157523.058009434.96480-0.326708.605307.19430K562WDR43
GHITMENSG00000165678.154692.597407166.28500-0.610806.879904.71230K562XRN2
GHITMENSG00000165678.1513236.7217016766.83380-0.341103.864602.81390K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GHITM is not available on ENCORE database.





2 RBPs can affect the splicing of GHITM :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXEGHITMENSG00000165678.15chr10+8590463085904772859084858590859485903750859038628590981085909999-0.062000.011250.069632includedK562AQR
MXEGHITMENSG00000165678.15chr10+8590463085904772859084858590859485903750859038628590981085909999-0.074000.001230.026832includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GHITM is not avaliable on ENCORE database.