SENP3-EIF4A1

General Information

Gene Name       : SENP3-EIF4A1
Gene ID             : ENSG00000277957.1
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SENP3-EIF4A1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SENP3-EIF4A1ENSG00000277957.10.390.280.34ENCSR000AEF
HepG2SENP3-EIF4A1ENSG00000277957.10.480.490.48ENCSR985KAT
K562SENP3-EIF4A1ENSG00000277957.10.070.170.12ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SENP3-EIF4A1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SENP3-EIF4A1 RNA is bound by 71 proteins.  







eCLIP assay for SENP3-EIF4A1 is not avaliable on ENCORE database.





71 proteins are bound to SENP3-EIF4A1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1774802117480225+intron-Distal4.10508400.00000K562LARP7
chr1774772427477308+5'-UTR,intron-Distal3.121154.27243HepG2DGCR8
chr1774769217476969+intron-Distal,intron-Proximal5.3630023.98788K562NONO
chr1774802167480255+intron-Distal4.12019400.00000HepG2DKC1
chr1774764667476527+intron-Distal4.229199.48355K562EWSR1
chr1774768127476859+5'-UTR,CDS,intron-Distal,intron-Proximal3.806793.04470K562FUS
chr1774802007480260+intron-Distal3.0761419.18111K562SDAD1
chr1774762307476289+intron-Distal,intron-Proximal3.7438530.25720K562TIA1
chr1774771477477198+5'-UTR,intron-Distal,intron-Proximal5.115196.95340K562LSM11
chr1774782597478328+intron-Distal4.720305.37430HepG2KHSRP
chr1774771427477188+5'-UTR,intron-Distal,intron-Proximal4.0088115.64838K562TIA1
chr1774771677477221+5'-UTR,intron-Distal,intron-Proximal4.365189.63210K562DDX51
chr1774762887476354+intron-Distal3.460443.93438HepG2PCBP2
chr1774801247480198+intron-Distal3.4478683.09716K562SERBP1
chr1774769117476998+intron-Distal,intron-Proximal4.6891750.22887HepG2CSTF2T
chr1774769487477003+intron-Distal,intron-Proximal3.206236.17666K562DROSHA
chr1774772517477320+5'-UTR,intron-Distal3.5680910.11556K562EWSR1
chr1774769207477001+intron-Distal,intron-Proximal4.051074.50192K562FAM120A
chr1774763237476378+intron-Distal3.590564.58072K562DHX30
chr1774802487480264+intron-Distal4.13273400.00000K562LARP7
chr1774765577476652+5'-UTR,intron-Distal,intron-Proximal3.108978.23790K562EWSR1
chr1774769357476966+intron-Distal,intron-Proximal3.865417.16432HepG2FASTKD2
chr1774750727475098+3'-UTR,intron-Distal3.525303.68829K562YBX3
chr1774749497475066+3'-UTR,intron-Distal,intron-Proximal3.877245.09919K562DDX55
chr1774763847476439+intron-Distal3.317325.59934K562FAM120A
chr1774749547475011+3'-UTR,intron-Distal,intron-Proximal4.133033.59284HepG2LSM11
chr1774771317477245+5'-UTR,intron-Distal,intron-Proximal5.5045330.38048K562EWSR1
chr1774771237477240+5'-UTR,intron-Distal,intron-Proximal5.1157710.35480K562FUS
chr1774773677477400+5'-UTR,intron-Distal4.891514.75034HepG2XPO5
chr1774762887476401+intron-Distal4.9157821.04009HepG2FKBP4
chr1774770547477081+CDS,intron-Distal3.358448.54455HepG2CSTF2T
chr1774762957476373+intron-Distal3.7138118.51041K562GTF2F1
chr1774763637476436+intron-Distal4.1966321.03689HepG2EFTUD2
chr1774763707476442+intron-Distal3.321956.53351HepG2FUS
chr1774762937476372+intron-Distal3.7271211.93979K562XRN2
chr1774801947480212+intron-Distal3.90085400.00000HepG2NOLC1
chr1774802497480260+intron-Distal3.6022356.76558K562PHF6
chr1774769087476974+intron-Distal,intron-Proximal3.512958.00340K562DDX52
chr1774763947476421+intron-Distal3.368936.47263K562EFTUD2
chr1774762187476284+intron-Distal,intron-Proximal3.234056.19554HepG2FUS
chr1774774377477482+5'-UTR,intron-Distal,intron-Proximal3.396774.61174HepG2FKBP4
chr1774762207476285+intron-Distal,intron-Proximal3.9984726.47983HepG2RBM22
chr1774774427477478+5'-UTR,intron-Distal3.155173.19604K562SLTM
chr1774763007476370+intron-Distal4.8259325.00331K562CSTF2T
chr1774801727480194+intron-Distal4.39364400.00000K562AATF
chr1774772477477321+5'-UTR,intron-Distal3.056757.09619K562SLTM
chr1774762427476369+intron-Distal,intron-Proximal4.0312415.38420HepG2XRN2
chr1774802177480253+intron-Distal4.48845400.00000HepG2NOLC1
chr1774802127480216+intron-Distal3.5573928.59443HepG2SSB
chr1774774477477494+5'-UTR,intron-Distal,intron-Proximal3.198804.79181K562FAM120A
chr1774772427477327+5'-UTR,intron-Distal3.4146218.24743HepG2FAM120A
chr1774769267477002+intron-Distal,intron-Proximal3.243758.98868HepG2SFPQ
chr1774763027476362+intron-Distal3.161425.37613HepG2DGCR8
chr1774802357480258+intron-Distal4.73660400.00000K562SMNDC1
chr1774774427477521+5'-UTR,intron-Distal,intron-Proximal3.630535.80394HepG2DROSHA
chr1774771957477234+5'-UTR,intron-Distal5.4954015.05491HepG2EFTUD2
chr1774802007480256+intron-Distal3.0546846.60352HepG2NOL12
chr1774766867476737+5'-UTR,CDS,intron-Distal,intron-Proximal4.313104.34810K562DDX52
chr1774771307477181+5'-UTR,intron-Distal,intron-Proximal3.490117.65934HepG2XRN2
chr1774813737481376+3'-UTR,intron-Distal,intron-Proximal3.26071400.00000HepG2NOLC1
chr1774774397477519+5'-UTR,intron-Distal,intron-Proximal4.5937013.76636K562EWSR1
chr1774763587476437+intron-Distal3.085405.97840HepG2DROSHA
chr1774763017476384+intron-Distal4.5320911.46821K562FAM120A
chr1774769317476964+intron-Distal,intron-Proximal4.223273.02253K562MTPAP
chr1774772527477315+5'-UTR,intron-Distal3.273509.13876K562CSTF2T
chr1774781037478109+intron-Distal3.49874400.00000HepG2DKC1
chr1774772437477340+5'-UTR,intron-Distal3.261785.72386K562AKAP8L
chr1774813457481351+3'-UTR,intron-Distal,intron-Proximal6.30181400.00000HepG2DKC1
chr1774802157480260+intron-Distal3.1173346.46271K562SF3B4
chr1774802167480244+intron-Distal4.04659400.00000K562PHF6
chr1774801947480210+intron-Distal4.50596400.00000K562AATF
chr1774749547475008+3'-UTR,intron-Distal,intron-Proximal4.7269844.09871K562PABPC4
chr1774763687476478+intron-Distal3.402759.17762K562FUS
chr1774764637476533+intron-Distal5.1699614.39084K562NONO
chr1774767017476762+5'-UTR,CDS,intron-Distal,intron-Proximal4.0470213.37988K562EWSR1
chr1774762017476297+intron-Distal,intron-Proximal5.1532910.12296K562FUS
chr1774772027477210+5'-UTR,intron-Distal5.095746.41228HepG2XRN2
chr1774801987480248+intron-Distal3.1716021.29480K562SERBP1
chr1774765657476596+5'-UTR,intron-Distal4.370915.05409HepG2NCBP2
chr1774801317480200+intron-Distal3.2780739.61220K562SDAD1
chr1774801287480194+intron-Distal3.01788400.00000HepG2NOLC1
chr1774801517480187+intron-Distal3.76241400.00000K562PHF6
chr1774771427477187+5'-UTR,intron-Distal,intron-Proximal3.8559611.42588K562NONO
chr1774780927478103+intron-Distal,intron-Proximal3.65982400.00000HepG2DKC1
chr1774769227476990+intron-Distal,intron-Proximal3.3652510.10154HepG2XRN2
chr1774769277476998+intron-Distal,intron-Proximal3.6515210.08217K562DDX51
chr1774763077476352+intron-Distal4.2464112.51026K562NONO
chr1774801767480193+intron-Distal3.70956400.00000K562LARP7
chr1774763927476423+intron-Distal4.062525.87922K562DDX51
chr1774762597476400+intron-Distal,intron-Proximal3.942934.85963K562U2AF1
chr1774763707476417+intron-Distal4.5888212.87138K562CSTF2T
chr1774802197480258+intron-Distal3.3372726.70730K562NIPBL
chr1774765597476631+5'-UTR,intron-Distal,intron-Proximal5.375729.37739HepG2SFPQ
chr1774769207477047+CDS,intron-Distal,intron-Proximal3.8793310.67728HepG2PCBP2
chr1774771877477242+5'-UTR,intron-Distal,intron-Proximal3.7431325.73945HepG2CSTF2T
chr1774762277476310+intron-Distal,intron-Proximal3.3072910.16453HepG2CDC40
chr1774762097476287+intron-Distal,intron-Proximal4.0640810.64268K562EFTUD2
chr1774769177477000+intron-Distal,intron-Proximal4.0768931.39244HepG2FAM120A
chr1774813387481345+3'-UTR,intron-Distal,intron-Proximal6.27682400.00000HepG2DKC1
chr1774769427476967+intron-Distal,intron-Proximal3.989655.56093HepG2RBM5
chr1774763927476421+intron-Distal3.603995.14244K562DROSHA
chr1774769107476963+intron-Distal,intron-Proximal3.3324713.70478HepG2PRPF4
chr1774813807481388+3'-UTR,intron-Distal,intron-Proximal5.43872400.00000HepG2DKC1
chr1774772607477299+5'-UTR,intron-Distal3.830964.66021K562GEMIN5
chr1774768877476998+intron-Distal,intron-Proximal3.342314.08182K562IGF2BP2
chr1774769697477012+intron-Distal6.4154319.62462K562NONO
chr1774771977477242+5'-UTR,intron-Distal4.0658619.37781HepG2FAM120A
chr1774770127477083+CDS,intron-Distal5.1713116.54800K562NONO
chr1774749587475037+3'-UTR,intron-Distal,intron-Proximal4.398519.71303HepG2DDX55
chr1774762227476288+intron-Distal,intron-Proximal4.9377030.47083HepG2EFTUD2
chr1774771877477245+5'-UTR,intron-Distal,intron-Proximal4.7260721.38104K562NONO
chr1774802257480271+intron-Distal3.81430400.00000HepG2LARP7
chr1774762887476363+intron-Distal4.0614428.51063HepG2EFTUD2
chr1774771247477237+5'-UTR,intron-Distal,intron-Proximal3.467388.72776K562AKAP8L
chr1774765567476594+5'-UTR,intron-Distal4.3563417.24371HepG2FAM120A
chr1774774387477496+5'-UTR,intron-Distal,intron-Proximal3.362305.94112K562GTF2F1
chr1774765657476610+5'-UTR,intron-Distal4.205646.37789HepG2GTF2F1
chr1774802197480247+intron-Distal3.95338400.00000HepG2NIP7
chr1774771407477190+5'-UTR,intron-Distal,intron-Proximal4.1257111.56482K562CSTF2T
chr1774771217477187+5'-UTR,intron-Distal,intron-Proximal4.259404.45054HepG2PCBP2
chr1774771317477216+5'-UTR,intron-Distal,intron-Proximal3.141516.44374K562DHX30
chr1774763587476446+intron-Distal4.8069649.76068HepG2CSTF2T
chr1774763747476443+intron-Distal3.0777411.62235K562PRPF8
chr1774762697476329+intron-Distal,intron-Proximal3.971057.75370K562DDX51
chr1774771447477220+5'-UTR,intron-Distal,intron-Proximal3.4994210.07097K562SLTM
chr1774801727480176+intron-Distal3.02529400.00000HepG2DKC1
chr1774774407477485+5'-UTR,intron-Distal,intron-Proximal3.460835.12003HepG2RBM5
chr1774771407477195+5'-UTR,intron-Distal,intron-Proximal3.3636413.92310HepG2EFTUD2
chr1774772117477300+5'-UTR,intron-Distal4.0626314.37122HepG2FKBP4
chr1774772437477330+5'-UTR,intron-Distal4.1889339.60753HepG2CSTF2T
chr1774763627476409+intron-Distal4.4742318.07037K562NONO
chr1774765177476623+5'-UTR,intron-Distal,intron-Proximal3.943645.05066K562HNRNPM
chr1774763637476442+intron-Distal4.6577020.50009HepG2PRPF4
chr1774763727476409+intron-Distal3.862285.42112K562XRN2
chr1774771507477208+5'-UTR,intron-Distal,intron-Proximal3.350137.02925K562AQR
chr1774774387477554+5'-UTR,intron-Distal,intron-Proximal3.4129616.04245K562NONO
chr1774764097476463+intron-Distal5.4553418.00195K562NONO
chr1774748687474926+3'-UTR,intron-Distal,intron-Proximal3.150556.91621HepG2PCBP2
chr1774813767481380+3'-UTR,intron-Distal,intron-Proximal5.15828400.00000HepG2DKC1
chr1774781197478121+intron-Distal3.31556400.00000HepG2DKC1
chr1774749497475102+3'-UTR,intron-Distal,intron-Proximal3.000395.56734HepG2LARP4
chr1774771397477237+5'-UTR,intron-Distal,intron-Proximal3.307028.50354K562XRN2
chr1774772487477315+5'-UTR,intron-Distal4.190253.64484HepG2HNRNPC
chr1774774427477525+5'-UTR,intron-Distal,intron-Proximal3.620364.69685K562FUS
chr1774765287476629+5'-UTR,intron-Distal,intron-Proximal4.4983428.11071HepG2CSTF2T
chr1774765617476592+5'-UTR,intron-Distal4.656367.37772HepG2EFTUD2
chr1774802607480265+intron-Distal5.24627400.00000HepG2DKC1
chr1774765577476634+5'-UTR,intron-Distal,intron-Proximal5.7948522.64565K562NONO
chr1774767027476764+5'-UTR,CDS,intron-Distal,intron-Proximal4.8531813.81407K562CSTF2T
chr1774774387477497+5'-UTR,intron-Distal,intron-Proximal4.1661117.38098K562CSTF2T
chr1774801797480193+intron-Distal3.2421451.50188K562SMNDC1
chr1774766277476663+5'-UTR,intron-Distal,intron-Proximal4.563563.60282K562LSM11
chr1774763617476466+intron-Distal3.8546816.46725K562EWSR1
chr1774763767476408+intron-Distal3.856255.28341HepG2CDC40
chr1774802037480209+intron-Distal3.9535619.60841K562SMNDC1
chr1774781097478112+intron-Distal3.35552400.00000HepG2DKC1
chr1774801277480193+intron-Distal3.37565400.00000HepG2NIP7
chr1774762807476431+intron-Distal,intron-Proximal4.2369411.39545K562FASTKD2
chr1774767977476855+5'-UTR,CDS,intron-Distal,intron-Proximal5.8687413.93568K562NONO
chr1774764097476466+intron-Distal3.9607714.15020K562TIA1
chr1774769047476986+intron-Distal,intron-Proximal4.874758.60984K562FUS
chr1774762977476368+intron-Distal3.192058.08475K562FUS
chr1774797297479820+intron-Distal,intron-Proximal3.196154.46798K562RBFOX2
chr1774801277480176+intron-Distal3.75501400.00000K562LARP7
chr1774771817477205+5'-UTR,intron-Distal,intron-Proximal3.181386.22348HepG2RBFOX2
chr1774801277480174+intron-Distal3.09819400.00000HepG2SSB
chr1774766447476686+5'-UTR,intron-Distal,intron-Proximal5.402758.79830K562NONO
chr1774771907477252+5'-UTR,intron-Distal,intron-Proximal4.3727717.20398K562CSTF2T
chr1774802177480258+intron-Distal3.9088638.88074K562ZC3H8
chr1774767957476820+5'-UTR,CDS,intron-Distal4.807195.80843K562CSTF2T
chr1774772757477328+5'-UTR,intron-Distal3.048096.52362K562PRPF8
chr1774766207476681+5'-UTR,intron-Distal,intron-Proximal5.8371213.00084K562CSTF2T
chr1774771227477187+5'-UTR,intron-Distal,intron-Proximal4.1945934.33344HepG2CSTF2T
chr1774762947476354+intron-Distal5.1232527.85742HepG2PRPF4
chr1774802277480248+intron-Distal4.02634400.00000K562LARP7
chr1774764627476518+intron-Distal3.9388619.37484HepG2CSTF2T
chr1774765787476621+5'-UTR,intron-Distal,intron-Proximal4.718686.36025HepG2DGCR8
chr1774772697477300+5'-UTR,intron-Distal3.210605.87132HepG2FASTKD2
chr1774801757480178+intron-Distal3.0498343.82160K562SMNDC1
chr1774769207476996+intron-Distal,intron-Proximal3.009525.37160HepG2DGCR8
chr1774769177477014+intron-Distal,intron-Proximal3.5292416.17880K562EWSR1
chr1774771267477185+5'-UTR,intron-Distal,intron-Proximal3.849556.42619HepG2DROSHA
chr1774802107480266+intron-Distal4.78472400.00000K562AATF
chr1774772297477304+5'-UTR,intron-Distal4.6786116.29579K562GTF2F1
chr1774813567481376+3'-UTR,intron-Distal,intron-Proximal5.69496400.00000HepG2DKC1
chr1774801277480172+intron-Distal4.37226400.00000K562AATF
chr1774813407481373+3'-UTR,intron-Distal,intron-Proximal3.40889400.00000HepG2NOLC1
chr1774813777481392+3'-UTR,intron-Distal,intron-Proximal3.64646400.00000HepG2NOLC1
chr1774769367476971+intron-Distal,intron-Proximal4.019427.02213HepG2FKBP4
chr1774763597476417+intron-Distal5.8888015.19432HepG2GTF2F1
chr1774771387477183+5'-UTR,intron-Distal,intron-Proximal3.965767.70864HepG2RBM5
chr1774771897477238+5'-UTR,intron-Distal,intron-Proximal5.9284017.37196HepG2PRPF4
chr1774765497476581+5'-UTR,intron-Distal3.805614.70112K562XRN2
chr1774763617476449+intron-Distal3.313194.69251HepG2HNRNPUL1
chr1774802167480259+intron-Distal3.2314232.30652HepG2SSB
chr1774802107480224+intron-Distal4.0527474.51673K562SMNDC1
chr1774773567477404+5'-UTR,intron-Distal5.8399813.69613K562NONO
chr1774772407477331+5'-UTR,intron-Distal3.866957.48291K562FUS
chr1774771447477202+5'-UTR,intron-Distal,intron-Proximal4.430469.07046HepG2DGCR8
chr1774763027476357+intron-Distal4.2653610.22578HepG2GTF2F1
chr1774763737476439+intron-Distal3.068829.55485K562GTF2F1
chr1774763037476450+intron-Distal3.7813238.09285HepG2FAM120A
chr1774771317477214+5'-UTR,intron-Distal,intron-Proximal3.6082110.20491HepG2GTF2F1
chr1774764717476620+5'-UTR,intron-Distal,intron-Proximal5.3085424.49160K562CSTF2T
chr1774749797475098+3'-UTR,intron-Distal,intron-Proximal5.243707.04291K562DDX6
chr1774801937480211+intron-Distal3.74478400.00000K562LARP7
chr1774764787476577+5'-UTR,intron-Distal3.432006.49769K562FUS
chr1774762167476283+intron-Distal,intron-Proximal3.797959.90617K562RBM22
chr1774774417477480+5'-UTR,intron-Distal,intron-Proximal3.100064.74718HepG2GTF2F1
chr1774762877476377+intron-Distal3.6279416.35030K562EFTUD2
chr1774771257477197+5'-UTR,intron-Distal,intron-Proximal4.7951730.68441HepG2FAM120A
chr1774801847480192+intron-Distal3.24250400.00000HepG2DKC1
chr1774802567480269+intron-Distal3.31336400.00000HepG2NOLC1
chr1774769197477008+intron-Distal,intron-Proximal5.9154928.71657K562CSTF2T
chr1774771187477189+5'-UTR,intron-Distal,intron-Proximal4.8012029.97417HepG2PRPF4
chr1774813517481356+3'-UTR,intron-Distal,intron-Proximal6.15342400.00000HepG2DKC1
chr1774771297477190+5'-UTR,intron-Distal,intron-Proximal3.767768.58168HepG2FASTKD2
chr1774772397477324+5'-UTR,intron-Distal3.7870314.29785HepG2PRPF4
chr1774769257476981+intron-Distal,intron-Proximal4.3037313.00591HepG2EFTUD2
chr1774762957476358+intron-Distal4.4427138.37570HepG2CSTF2T
chr1774772447477275+5'-UTR,intron-Distal3.064383.84573K562PRPF8
chr1774762297476289+intron-Distal,intron-Proximal3.6401410.28666K562AQR
chr1774772457477337+5'-UTR,intron-Distal5.2056122.08170K562NONO
chr1774801287480177+intron-Distal3.5812632.96904K562SSB
chr1774771297477229+5'-UTR,intron-Distal,intron-Proximal4.3034817.09673K562GTF2F1
chr1774769117477040+intron-Distal,intron-Proximal3.5842012.92082HepG2GTF2F1
chr1774802257480235+intron-Distal4.73651400.00000K562SMNDC1
chr1774762287476294+intron-Distal,intron-Proximal3.9386812.98376HepG2PRPF4
chr1774767047476759+5'-UTR,CDS,intron-Distal,intron-Proximal5.0803622.55707K562NONO
chr1774767167476768+5'-UTR,CDS,intron-Distal,intron-Proximal5.7619827.12207HepG2CSTF2T
chr1774801807480184+intron-Distal3.10963400.00000HepG2DKC1
chr1774770177477096+CDS,intron-Distal,intron-Proximal3.300234.69057K562FUS
chr1774771367477211+5'-UTR,intron-Distal,intron-Proximal4.4825215.43305HepG2FKBP4
chr1774801957480261+intron-Distal3.5407920.32648K562SSB
chr1774771457477242+5'-UTR,intron-Distal,intron-Proximal3.183444.23770K562EIF4G2
chr1774763867476422+intron-Distal5.015453.60282K562LSM11
chr1774749557475020+3'-UTR,intron-Distal,intron-Proximal3.458594.23616K562TIA1
chr1774763107476374+intron-Distal3.1258612.35271K562PRPF8
chr1774771287477209+5'-UTR,intron-Distal,intron-Proximal3.865345.11450HepG2FUS
chr1774769257477004+intron-Distal,intron-Proximal4.3634918.84710K562GTF2F1
chr1774785767478582+3'-UTR,CDS,intron-Distal,intron-Proximal4.6269613.90015K562AQR
chr1774780317478034+intron-Distal,intron-Proximal3.89606400.00000HepG2DKC1
chr1774775767477588+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.248004.90458HepG2UCHL5
chr1774775547477591+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.603315.83621K562AQR
chr1774811447481175+3'-UTR,CDS,intron-Proximal4.2583610.27856K562GRWD1
chr1774810127481073+3'-UTR,CDS,intron-Proximal3.4814017.83591HepG2PRPF8
chr1774813927481399+3'-UTR,intron-Distal,intron-Proximal4.17615400.00000HepG2NOLC1
chr1774815527481624+3'-UTR,CDS,intron-Distal,intron-Proximal4.2934420.53091HepG2PRPF8
chr1774797807479877+3'-UTR,CDS,intron-Distal,intron-Proximal4.8778624.95068HepG2AQR
chr1774814237481459+3'-UTR,CDS,intron-Distal,intron-Proximal4.2222910.34347HepG2RBM5
chr1774784367478489+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.1255225.96932K562YBX3
chr1774803727480408+3'-UTR,CDS,intron-Proximal3.1167310.80674HepG2GRWD1
chr1774816577481688+3'-UTR,CDS,intron-Proximal3.8811712.03869HepG2PRPF8
chr1774811977481240+3'-UTR,CDS,intron-Proximal3.195467.89248K562GRWD1
chr1774762247476230+intron-Proximal4.7299824.14731K562TIA1
chr1774812267481265+3'-UTR,CDS,intron-Proximal3.259606.76873HepG2AQR
chr1774775387477606+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.1403919.48566HepG2AQR
chr1774761807476229+5'-UTR,CDS,intron-Proximal3.6439311.57889K562AQR
chr1774815937481633+intron-Proximal4.495629.12858HepG2SF3B4
chr1774761497476185+5'-UTR,CDS,intron-Proximal3.680035.60176HepG2SUB1
chr1774762407476280+intron-Proximal3.219387.88998HepG2FAM120A
chr1774762177476273+intron-Proximal4.141789.00851HepG2TIA1
chr1774775777477592+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.746156.31765K562LIN28B
chr1774687567468775+CDS,intron-Proximal4.584685.52963HepG2PPIG
chr1774761547476229+5'-UTR,CDS,intron-Proximal3.5976726.93245K562PRPF8
chr1774811447481174+3'-UTR,CDS,intron-Proximal4.3644720.93397K562LIN28B
chr1774775777477618+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.9496514.19039HepG2G3BP1
chr1774780347478070+intron-Distal,intron-Proximal3.65188400.00000HepG2DKC1
chr1774775247477567+5'-UTR,intron-Distal,intron-Proximal7.3088033.32642HepG2SF3B4
chr1774800337480070+intron-Distal,intron-Proximal3.682625.62040K562TIA1
chr1774812157481272+3'-UTR,CDS,intron-Proximal4.3449939.26010HepG2PRPF8
chr1774775867477667+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.9539938.20631HepG2PRPF8
chr1774798417479848+3'-UTR,CDS,intron-Distal,intron-Proximal5.364757.40172K562RPS3
chr1774804847480513+intron-Proximal5.0542515.81093HepG2PRPF8
chr1774808857480910+3'-UTR,CDS,intron-Proximal3.003996.98923K562UCHL5
chr1774807887480806+3'-UTR,CDS,intron-Proximal3.6576010.80148K562GRWD1
chr1774786187478657+3'-UTR,CDS,intron-Distal,intron-Proximal4.192589.78712K562AQR
chr1774805957480627+intron-Distal,intron-Proximal3.469366.82255HepG2U2AF2
chr1774690767469125+CDS,intron-Proximal3.965815.90868HepG2PRPF8
chr1774814757481493+3'-UTR,CDS,intron-Distal,intron-Proximal4.807824.97857HepG2AQR
chr1774799577480012+3'-UTR,CDS,intron-Distal,intron-Proximal3.026735.61744K562FXR2
chr1774761537476183+5'-UTR,CDS,intron-Proximal3.7427911.51787K562RPS3
chr1774785767478616+3'-UTR,CDS,intron-Distal,intron-Proximal4.8674713.20711HepG2AQR
chr1774816097481630+intron-Proximal4.234163.83748HepG2XRN2
chr1774785827478618+3'-UTR,CDS,intron-Distal,intron-Proximal4.8004520.81366K562AQR
chr1774785767478584+3'-UTR,CDS,intron-Distal,intron-Proximal5.107706.23016HepG2PRPF8
chr1774815937481621+intron-Proximal3.581463.24312K562XRN2
chr1774803737480393+3'-UTR,CDS,intron-Proximal4.6130221.01035HepG2G3BP1
chr1774810047481025+3'-UTR,CDS,intron-Proximal3.8034110.39839K562GRWD1
chr1774810767481122+3'-UTR,intron-Proximal3.3853515.44207HepG2PRPF8
chr1774816217481641+intron-Proximal3.520033.24312K562XRN2
chr1774814017481412+3'-UTR,intron-Distal,intron-Proximal6.20320400.00000HepG2DKC1
chr1774775777477589+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.073984.88658HepG2SUB1
chr1774814167481480+3'-UTR,CDS,intron-Distal,intron-Proximal5.1516717.69335HepG2SF3B4
chr1774798407479939+3'-UTR,CDS,intron-Distal,intron-Proximal3.0811921.50052HepG2G3BP1
chr1774762167476275+intron-Proximal4.564019.16409HepG2TIAL1
chr1774798287479836+intron-Distal,intron-Proximal4.450159.19628HepG2BUD13
chr1774762297476266+intron-Proximal4.993247.56728HepG2AQR
chr1774803737480392+3'-UTR,CDS,intron-Proximal3.533803.91115K562LIN28B
chr1774808417480901+3'-UTR,CDS,intron-Proximal4.0021316.68704HepG2EFTUD2
chr1774776247477652+5'-UTR,CDS,intron-Distal,intron-Proximal3.621186.57821HepG2AQR
chr1774803727480406+3'-UTR,CDS,intron-Proximal3.551328.37418K562GRWD1
chr1774785847478619+3'-UTR,CDS,intron-Distal,intron-Proximal4.788497.87148HepG2PRPF8
chr1774814827481495+3'-UTR,CDS,intron-Distal,intron-Proximal3.128585.54278K562LIN28B
chr1774762277476282+intron-Proximal3.335778.37528K562CSTF2T
chr1774813887481401+3'-UTR,intron-Distal,intron-Proximal5.38003400.00000HepG2DKC1
chr1774780707478072+intron-Distal,intron-Proximal3.48637400.00000HepG2DKC1
chr1774810727481112+3'-UTR,intron-Proximal3.258666.40795K562PRPF8
chr1774800107480052+intron-Distal,intron-Proximal4.6019616.50149HepG2PRPF8
chr1774812407481257+3'-UTR,intron-Proximal3.549645.45876HepG2BCLAF1
chr1774805927480638+intron-Distal,intron-Proximal4.969167.76290K562U2AF1
chr1774810277481101+3'-UTR,intron-Proximal4.4584018.57182HepG2EFTUD2
chr1774814007481409+3'-UTR,intron-Distal,intron-Proximal4.83091400.00000HepG2NOLC1
chr1774778077477824+intron-Distal,intron-Proximal3.369824.48983K562TIA1
chr1774762367476268+intron-Proximal3.890204.35138HepG2NCBP2
chr1774808387480903+3'-UTR,CDS,intron-Proximal3.4465321.54717K562EFTUD2
chr1774805007480523+intron-Proximal5.0400712.70303K562AQR
chr1774800137480040+intron-Distal,intron-Proximal4.490833.93614HepG2AQR
chr1774799677480011+3'-UTR,CDS,intron-Distal,intron-Proximal3.0448312.38074HepG2GRWD1
chr1774812727481312+3'-UTR,intron-Proximal5.29459400.00000HepG2DKC1
chr1774778637477890+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.0026028.03130K562LIN28B
chr1774805797480654+intron-Distal,intron-Proximal4.144747.79697K562U2AF2
chr1774799607480011+3'-UTR,CDS,intron-Distal,intron-Proximal5.2381333.51382K562RPS3
chr1774813127481316+3'-UTR,intron-Proximal5.79777400.00000HepG2DKC1
chr1774814237481475+3'-UTR,CDS,intron-Distal,intron-Proximal3.9798910.09513HepG2AQR
chr1774761537476224+5'-UTR,CDS,intron-Proximal5.3512651.59969HepG2PRPF8
chr1774774947477530+5'-UTR,intron-Distal,intron-Proximal5.5255339.04998HepG2RBM5
chr1774800557480099+intron-Distal,intron-Proximal4.698304.44893K562RBM22
chr1774803737480384+3'-UTR,CDS,intron-Proximal4.101727.02300K562RPS3
chr1774808867480899+3'-UTR,CDS,intron-Proximal3.073447.49401HepG2G3BP1
chr1774804837480500+intron-Proximal4.3701510.30697K562AQR
chr1774814827481505+3'-UTR,CDS,intron-Distal,intron-Proximal3.5193920.02893K562YBX3
chr1774812117481235+3'-UTR,CDS,intron-Proximal3.0298310.10321HepG2GRWD1
chr1774805157480578+intron-Proximal4.954254.03304K562RBM22
chr1774775307477556+5'-UTR,intron-Distal,intron-Proximal6.0023233.51087HepG2RBM5
chr1774762417476266+intron-Proximal4.340936.54942K562NONO
chr1774813167481329+3'-UTR,intron-Proximal5.79635400.00000HepG2DKC1
chr1774762297476265+intron-Proximal3.407158.81276K562PRPF8
chr1774776317477668+intron-Distal,intron-Proximal3.289924.41130K562AQR
chr1774780727478085+intron-Distal,intron-Proximal3.59468400.00000HepG2DKC1
chr1774810607481105+3'-UTR,intron-Proximal3.884447.17852HepG2AQR
chr1774811447481147+3'-UTR,CDS,intron-Proximal4.3193719.11106HepG2G3BP1
chr1774808707480898+3'-UTR,CDS,intron-Proximal3.2822512.75431HepG2PRPF8
chr1774800107480065+intron-Distal,intron-Proximal4.1969214.14073K562PRPF8
chr1774761727476223+5'-UTR,CDS,intron-Proximal3.377937.47024HepG2AQR
chr1774816147481643+intron-Proximal3.685838.28777K562PRPF8
chr1774762347476275+intron-Proximal3.067254.55362HepG2NKRF
chr1774810737481122+3'-UTR,intron-Proximal5.4958410.60219HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SENP3-EIF4A1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SENP3-EIF4A1 is not available on ENCORE database.

  • 18 RBPs can affect the levels of SENP3-EIF4A1.  








The Knockdown/knockout RNA-Seq assay for SENP3-EIF4A1 is not available on ENCORE database.





18 RBPs can affect the gene expression of SENP3-EIF4A1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SENP3-EIF4A1ENSG00000265500.116.773400.0000099999.999904.133103.04330HepG2EIF3D
SENP3-EIF4A1ENSG00000265500.170.2533026.104401.428203.616202.94320HepG2ETF1
SENP3-EIF4A1ENSG00000265500.131.0099010.982601.497402.052801.38430HepG2FIP1L1
SENP3-EIF4A1ENSG00000265500.123.548500.0000099999.999902.784201.88190HepG2GEMIN5
SENP3-EIF4A1ENSG00000265500.133.699108.616001.967502.972702.24910HepG2HNRNPK
SENP3-EIF4A1ENSG00000265500.121.201904.006402.403701.929801.31650HepG2IGF2BP1
SENP3-EIF4A1ENSG00000265500.127.922609.464601.560701.937601.40220HepG2NCBP2
SENP3-EIF4A1ENSG00000265500.10.0000013.17820-99999.999994.189802.92780HepG2PCBP2
SENP3-EIF4A1ENSG00000265500.19.430700.0000099999.999902.758401.53200HepG2PKM
SENP3-EIF4A1ENSG00000265500.10.000007.41130-99999.999992.169201.58650HepG2SAFB2
SENP3-EIF4A1ENSG00000265500.19.515900.0000099999.999902.424101.54140HepG2SERBP1
SENP3-EIF4A1ENSG00000265500.154.3096012.462302.123506.306505.15290HepG2UCHL5
SENP3-EIF4A1ENSG00000265500.10.0000011.26210-99999.999993.190202.11880K562AKAP8
SENP3-EIF4A1ENSG00000265500.1195.8738030.306102.6921014.7976013.59080K562AQR
SENP3-EIF4A1ENSG00000265500.150.210809.130902.459104.561103.81100K562FXR1
SENP3-EIF4A1ENSG00000265500.14.1451024.83050-2.582603.533102.63730K562HSPD1
SENP3-EIF4A1ENSG00000265500.140.336706.847902.558304.092703.18010K562PRPF8
SENP3-EIF4A1ENSG00000265500.172.5944032.701401.150402.029301.32990K562PUF60
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SENP3-EIF4A1 is not available on ENCORE database.





24 RBPs can affect the splicing of SENP3-EIF4A1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESENP3-EIF4A1ENSG00000265500.1chr17+748154474815627481144748123474816597482033-0.064000.000000.00000excludedK562PRPF8
SESENP3-EIF4A1ENSG00000265500.1chr17+748154474815627481144748123474816597482033-0.095000.000000.00004excludedHepG2U2AF1
SESENP3-EIF4A1ENSG00000265500.1chr17+748143774815627481144748123474816597482033-0.082000.000000.00004excludedHepG2U2AF2
SESENP3-EIF4A1ENSG00000265500.1chr17+747758374776267475601747618274778637478044-0.053000.000000.00000excludedK562AQR
SESENP3-EIF4A1ENSG00000265500.1chr17+746903374690817468696746890474736737473811-0.135000.000030.00056excludedK562AQR
SESENP3-EIF4A1ENSG00000265500.1chr17+747420074742517473967747408274746907474797-0.105000.000000.00005excludedK562AQR
SESENP3-EIF4A1ENSG00000265500.1chr17+747984774800777478327747857674803737480527-0.162000.000230.00350excludedK562AQR
SESENP3-EIF4A1ENSG00000265500.1chr17+747758374776267475601747618274778637477996-0.058000.000380.01933excludedK562SF3B1
A3SSSENP3-EIF4A1ENSG00000265500.1chr17+748066174808057480751748080574803737480483-0.065000.000010.01443shorterK562FXR2
A3SSSENP3-EIF4A1ENSG00000265500.1chr17+748148274815627481544748156274811447481234-0.078000.000000.00000shorterK562SUPV3L1
A3SSSENP3-EIF4A1ENSG00000265500.1chr17+7481503748156274815447481562748114474812340.235000.000000.00029longerK562SF3B4
A3SSSENP3-EIF4A1ENSG00000265500.1chr17+748066174808057480751748080574803737480483-0.059000.000000.00000shorterHepG2U2AF2
A3SSSENP3-EIF4A1ENSG00000265500.1chr17+7477839747804474778637478044747752274776260.153000.000000.00000longerK562AQR
A3SSSENP3-EIF4A1ENSG00000265500.1chr17+7479820748001074798477480010747843674785760.089000.000000.00001longerK562AQR
A3SSSENP3-EIF4A1ENSG00000265500.1chr17+7481462748156274815447481562748114474812340.077000.000000.00000longerK562AQR
A3SSSENP3-EIF4A1ENSG00000265500.1chr17+7469011746908174690337469081746869674689040.054000.000540.00401longerK562AQR
A3SSSENP3-EIF4A1ENSG00000265500.1chr17+7474175747425174742007474251747396774740820.108000.000000.00000longerK562AQR
A3SSSENP3-EIF4A1ENSG00000265500.1chr17+7481503748156274815447481562748114474812340.547000.000000.00000longerHepG2SF3B4
MXESENP3-EIF4A1ENSG00000265500.1chr17+747843674785767479841748001074778637477996748037374804830.096000.000150.004561includedK562DROSHA
MXESENP3-EIF4A1ENSG00000265500.1chr17+746903374690817470243747032274687567468904747367374738110.143000.005640.059551includedK562DROSHA
MXESENP3-EIF4A1ENSG00000265500.1chr17+747757774776267477863747799674756017476182747843674785760.116000.000000.000081includedK562LIN28B
MXESENP3-EIF4A1ENSG00000265500.1chr17+747786374779967478436747857674775777477626747984174800100.056000.002150.064461includedK562LIN28B
MXESENP3-EIF4A1ENSG00000265500.1chr17+74690337469081747024374703227468756746890474736737473811-0.187000.000620.030952includedK562FXR1
MXESENP3-EIF4A1ENSG00000265500.1chr17+747783974779877480390748048374775227477626748066174808050.072000.000000.000001includedK562AQR
MXESENP3-EIF4A1ENSG00000265500.1chr17+747560174761827477577747777674746907474797747786374779960.271000.002750.021751includedK562AQR
MXESENP3-EIF4A1ENSG00000265500.1chr17+747560174761827477577747775474746907474797747786374779960.241000.009760.062111includedK562AQR
MXESENP3-EIF4A1ENSG00000265500.1chr17+747560174761827477577747777274746907474797747786374779960.291000.001730.014641includedK562AQR
MXESENP3-EIF4A1ENSG00000265500.1chr17+747560174761827477577747768374746907474797747786374779960.285000.002900.022781includedK562AQR
MXESENP3-EIF4A1ENSG00000265500.1chr17+747839374785767479841748007774777807477996748037374805270.465000.000040.000521includedK562AQR
MXESENP3-EIF4A1ENSG00000265500.1chr17+747783974779967478375747857674775227477626747984174800100.113000.000000.000001includedK562AQR
MXESENP3-EIF4A1ENSG00000265500.1chr17+747837574785767479841748007774778657477996748037374805270.572000.000000.000001includedK562AQR
MXESENP3-EIF4A1ENSG00000265500.1chr17+74775837477626747786374780447475601747618274784367478576-0.304000.000000.000002includedK562AQR
MXESENP3-EIF4A1ENSG00000265500.1chr17+74690337469081747024374703227468756746890474736737473811-0.172000.001070.009702includedK562AQR
MXESENP3-EIF4A1ENSG00000265500.1chr17+74778657477987748039074805277477522747762674806617480793-0.398000.000000.000002includedK562AQR
MXESENP3-EIF4A1ENSG00000265500.1chr17+74778657477987748037374805277477522747762674806617480793-0.401000.000000.000002includedK562AQR
MXESENP3-EIF4A1ENSG00000265500.1chr17+74778637477996747843674785767477577747762674798417480010-0.089000.000540.005292includedK562AQR
MXESENP3-EIF4A1ENSG00000265500.1chr17+74778637477996747837574785767477522747762674798417480010-0.088000.000710.006792includedK562AQR
MXESENP3-EIF4A1ENSG00000265500.1chr17+747757774776267477863747799674756017476182747843674785760.094000.000020.002431includedK562LARP7
MXESENP3-EIF4A1ENSG00000265500.1chr17+747786374779967478436747857674775777477626747984174800100.080000.002820.056711includedHepG2DDX55
MXESENP3-EIF4A1ENSG00000265500.1chr17+747469074747977475601747618274742007474251747757774776260.150000.000120.020351includedK562AARS
MXESENP3-EIF4A1ENSG00000265500.1chr17+74775777477626747786374779967475601747618274784367478576-0.060000.000910.066012includedK562AARS
MXESENP3-EIF4A1ENSG00000265500.1chr17+747757774776267477863747799674756017476182747843674785760.112000.000000.000321includedK562PHF6
MXESENP3-EIF4A1ENSG00000265500.1chr17+747786374779967478436747857674775777477626747984174800100.072000.000170.017281includedK562PHF6
MXESENP3-EIF4A1ENSG00000265500.1chr17+74778637477996747843674785767477577747762674798417480010-0.085000.000090.014962includedK562RBFOX2
MXESENP3-EIF4A1ENSG00000265500.1chr17+747757774776267477863747799674756017476182747843674785760.070000.001940.034081includedK562HNRNPC
MXESENP3-EIF4A1ENSG00000265500.1chr17+74775777477626747786374779967475601747618274784367478576-0.105000.000010.004122includedHepG2DDX52
MXESENP3-EIF4A1ENSG00000265500.1chr17+74778637477996747843674785767477577747762674798417480010-0.055000.001650.042052includedK562PPIL4
MXESENP3-EIF4A1ENSG00000265500.1chr17+74775777477626747786374779967475601747618274784367478576-0.072000.000040.003102includedK562DDX55
MXESENP3-EIF4A1ENSG00000265500.1chr17+74775777477626747786374779967475601747618274784367478576-0.086000.003330.079082includedK562DHX30
MXESENP3-EIF4A1ENSG00000265500.1chr17+74778637477996747843674785767477577747762674798417480010-0.107000.000000.000042includedK562DHX30
MXESENP3-EIF4A1ENSG00000265500.1chr17+74778637477996747843674785767477577747762674798417480010-0.101000.000100.022752includedHepG2XRCC6
MXESENP3-EIF4A1ENSG00000265500.1chr17+74778637477996747843674785767477577747762674798417480010-0.067000.004190.082812includedHepG2TIAL1
MXESENP3-EIF4A1ENSG00000265500.1chr17+747757774776267477863747799674756017476182747843674785760.129000.000000.000161includedK562SUPV3L1
MXESENP3-EIF4A1ENSG00000265500.1chr17+747786374779967478436747857674775777477626747984174800100.109000.000390.012211includedK562SUPV3L1
MXESENP3-EIF4A1ENSG00000265500.1chr17+747843674785767479841748001074778637477996748037374804830.080000.001790.034181includedK562HNRNPUL1
MXESENP3-EIF4A1ENSG00000265500.1chr17+74778637477996747843674785767477577747762674798417480010-0.095000.000480.081862includedHepG2SUB1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SENP3-EIF4A1 is not avaliable on ENCORE database.