PPIF

General Information

Gene Name : PPIF
Gene ID : ENSG00000108179.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PPIF)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PPIF	ENSG00000108179.13	66.89	111.59	89.24	ENCSR000AEF
HepG2	PPIF	ENSG00000108179.13	264.04	155.29	209.67	ENCSR985KAT
K562	PPIF	ENSG00000108179.13	180.27	193.32	186.80	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PPIF is not avaliable on ENCORE database.

Proteins bound to RNA

PPIF RNA is bound by 33 proteins.

CanvasJS.com

eCLIP assay for PPIF is not avaliable on ENCORE database.

33 proteins are bound to PPIF RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	81114396	81114448	+	3'-UTR	8.11104	91.50415	K562	PABPC4
chr10	81114005	81114120	+	3'-UTR	5.83882	47.73397	HepG2	UPF1
chr10	81114198	81114289	+	3'-UTR	4.46887	34.64516	K562	UPF1
chr10	81113979	81114117	+	3'-UTR	3.41185	29.80206	K562	UPF1
chr10	81107506	81107540	+	intron-Proximal	5.20510	26.79867	K562	AQR
chr10	81113904	81113973	+	3'-UTR	5.30266	25.32672	K562	UPF1
chr10	81108815	81108957	+	CDS,intron-Proximal	4.67463	22.79582	HepG2	PRPF8
chr10	81113804	81113920	+	3'-UTR	5.60361	21.71525	HepG2	AKAP1
chr10	81107509	81107535	+	intron-Proximal	5.77604	21.09145	HepG2	AQR
chr10	81114289	81114354	+	3'-UTR	4.43950	20.58173	K562	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 115 entries

eCLIP assay for PPIF is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PPIF is not available on ENCORE database.
135 RBPs can affect the levels of PPIF.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PPIF is not available on ENCORE database.

135 RBPs can affect the gene expression of PPIF :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PPIF	ENSG00000108179.9	2498.15830	5736.48820	-1.19930	83.57690	81.81210	HepG2	SRFBP1
PPIF	ENSG00000108179.9	1130.97210	2586.11120	-1.19320	69.02090	66.24770	HepG2	ILF2
PPIF	ENSG00000108179.9	1373.30810	3334.63420	-1.27990	40.81480	38.51650	HepG2	RBM25
PPIF	ENSG00000108179.9	6297.27760	3686.77440	0.77230	36.13420	34.85450	HepG2	SRSF1
PPIF	ENSG00000108179.9	1644.59230	3313.67500	-1.01070	35.87490	34.15080	HepG2	TAF15
PPIF	ENSG00000108179.9	1787.06300	3674.32970	-1.03990	35.83530	34.00760	HepG2	QKI
PPIF	ENSG00000108179.9	1235.69120	2249.41680	-0.86420	34.69860	32.64100	HepG2	DNAJC2
PPIF	ENSG00000108179.9	1046.28530	3138.04280	-1.58460	36.07270	32.29990	HepG2	BCCIP
PPIF	ENSG00000108179.9	1945.42250	3625.49360	-0.89810	31.47190	27.99970	K562	BCCIP
PPIF	ENSG00000108179.9	4574.77180	2132.62180	1.10100	27.85090	26.05890	K562	FXR1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 168 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PPIF is not available on ENCORE database.

3 RBPs can affect the splicing of PPIF :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PPIF	ENSG00000108179.9	chr10	+	81112072	81112148	81111242	81111339	81113462	81115093	-0.07500	0.00000	0.00000	excluded	HepG2	U2AF1
A3SS	PPIF	ENSG00000108179.9	chr10	+	81113366	81113462	81113400	81113462	81112072	81112148	0.44000	0.00000	0.00001	longer	K562	AQR
A5SS	PPIF	ENSG00000108179.9	chr10	+	81111222	81111470	81111222	81111339	81112072	81112148	0.07500	0.00000	0.00000	longer	K562	AQR
SE	PPIF	ENSG00000108179.9	chr10	+	81112024	81112148	81111242	81111339	81113462	81115093	-0.07300	0.00003	0.00244	excluded	K562	SF3B1

Showing 1 to 4 of 4 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PPIF

General Information

Functions

Localization

Domains (AlphaFold: PPIF)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PPIF is not avaliable on ENCORE database.

33 proteins are bound to PPIF RNA:

eCLIP assay for PPIF is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PPIF is not available on ENCORE database.

135 RBPs can affect the gene expression of PPIF :

The Knockdown/knockout RNA-Seq assay for PPIF is not available on ENCORE database.

3 RBPs can affect the splicing of PPIF :

The Knockdown/knockout RNA-Seq assay for PPIF is not avaliable on ENCORE database.