DCAF13

General Information

Gene Name       : DCAF13
Gene ID             : ENSG00000164934.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: DCAF13)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DCAF13ENSG00000164934.1366.8756.8961.88ENCSR000AEF
HepG2DCAF13ENSG00000164934.1341.8056.9749.38ENCSR985KAT
K562DCAF13ENSG00000164934.1387.2094.2890.74ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DCAF13 is not avaliable on ENCORE database.



Proteins bound to RNA
  • DCAF13 RNA is bound by 14 proteins.  







eCLIP assay for DCAF13 is not avaliable on ENCORE database.





14 proteins are bound to DCAF13 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr8104455020104455136+3'-UTR,CDS,intron-Proximal3.326516.85184K562GRWD1
chr8104439515104439635+3'-UTR,CDS,intron-Distal,intron-Proximal3.351818.55250K562KHSRP
chr8104455020104455114+3'-UTR,CDS,intron-Proximal3.335376.47196HepG2BCLAF1
chr8104455022104455182+3'-UTR,CDS,intron-Proximal3.267894.77591K562CPSF6
chr8104439575104439705+3'-UTR,intron-Distal,intron-Proximal3.599173.81210HepG2KHSRP
chr8104455109104455213+3'-UTR3.856813.89294K562KHSRP
chr8104455073104455190+3'-UTR,CDS3.9071615.08036K562PUM2
chr8104427625104427679+5'-UTR,CDS4.8061110.52516K562DDX3X
chr8104427639104427704+5'-UTR,CDS3.028703.25772K562ZNF622
chr8104427637104427757+5'-UTR,CDS,intron-Proximal3.279623.64037HepG2NCBP2
chr8104427679104427740+5'-UTR,CDS3.6843213.41602K562DDX3X
chr8104439381104439445+CDS3.713114.82082K562ZNF622
chr8104453680104453724+CDS,intron-Proximal3.333623.07653K562ZNF622
chr8104432496104432683+CDS,intron-Distal3.140428.46305K562ZNF622
chr8104438317104438373+CDS3.337623.27569HepG2BCLAF1
chr8104439374104439453+CDS4.220393.02457HepG2BCLAF1
chr8104444906104444948+CDS3.372623.07653K562ZNF622
chr8104452395104452507+CDS,intron-Proximal3.2203610.08361K562ZNF622
chr8104439345104439439+CDS3.815863.34184HepG2GRWD1
chr8104455020104455050+CDS,intron-Proximal3.180374.62149K562ZNF800
chr8104427704104427746+CDS,intron-Proximal3.679564.82082K562ZNF622
chr8104453680104453720+CDS,intron-Proximal3.644584.40383K562UCHL5
chr8104453735104453756+CDS3.212246.20049K562YBX3
chr8104455050104455097+CDS3.601205.36496K562ZNF800
chr8104452403104452502+CDS,intron-Proximal4.7183210.38007K562UCHL5
chr8104442641104442692+intron-Distal4.189044.54401K562KHSRP
chr8104448025104448147+intron-Distal,intron-Proximal4.334664.53454K562PRPF8
chr8104449814104449923+intron-Distal3.533243.90146K562KHSRP
chr8104451132104451213+intron-Distal3.649945.09669HepG2QKI
chr8104451114104451193+intron-Distal4.6711410.17421K562QKI
chr8104442781104442827+intron-Proximal5.6220410.42871HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DCAF13 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DCAF13 is not available on ENCORE database.

  • 96 RBPs can affect the levels of DCAF13.  








The Knockdown/knockout RNA-Seq assay for DCAF13 is not available on ENCORE database.





96 RBPs can affect the gene expression of DCAF13 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DCAF13ENSG00000164934.91003.03550861.193200.219901.888901.36840HepG2ACO1
DCAF13ENSG00000164934.91206.92780993.849800.280101.965901.30730HepG2CALR
DCAF13ENSG00000164934.91000.602101321.52290-0.401302.288701.41080HepG2CCAR1
DCAF13ENSG00000164934.9707.786801158.08940-0.710408.025006.90600HepG2CPSF6
DCAF13ENSG00000164934.91589.523901342.220300.243902.417601.80970HepG2CELF1
DCAF13ENSG00000164934.91159.240101443.20890-0.316104.412503.51100HepG2DAZAP1
DCAF13ENSG00000164934.9564.17100858.97620-0.606504.444403.67660HepG2DDX6
DCAF13ENSG00000164934.9598.08570808.51740-0.434903.429102.34390HepG2DHX30
DCAF13ENSG00000164934.9621.49230823.92350-0.406804.108403.31550HepG2DKC1
DCAF13ENSG00000164934.9682.55520838.29880-0.296502.381401.72320HepG2DNAJC21
DCAF13ENSG00000164934.9641.75270830.80600-0.372504.315403.53390HepG2DNAJC2
DCAF13ENSG00000164934.9651.71310825.83340-0.341601.894101.39270HepG2EIF2S1
DCAF13ENSG00000164934.91302.58560888.550400.551803.575202.79760HepG2EIF4B
DCAF13ENSG00000164934.9952.269501363.92790-0.518305.105004.01880HepG2EIF4G2
DCAF13ENSG00000164934.91304.631001758.06160-0.430306.910206.03200HepG2ETF1
DCAF13ENSG00000164934.91089.81880841.522400.372903.207102.30930HepG2EWSR1
DCAF13ENSG00000164934.91104.75530812.756700.442704.045902.70040HepG2FASTKD2
DCAF13ENSG00000164934.91385.278001026.681400.432103.379702.53610HepG2FIP1L1
DCAF13ENSG00000164934.9716.534201312.85230-0.8736010.079008.91130HepG2GPKOW
DCAF13ENSG00000164934.9562.59300846.32890-0.589105.573204.70030HepG2HNRNPA1
DCAF13ENSG00000164934.9669.98290941.35450-0.490604.203303.36130HepG2HNRNPC
DCAF13ENSG00000164934.9909.490601277.60440-0.490307.561906.45380HepG2HNRNPF
DCAF13ENSG00000164934.91123.99820864.796700.378102.762702.06630HepG2HNRNPK
DCAF13ENSG00000164934.9703.513901252.87300-0.8326010.278009.15370HepG2HNRNPLL
DCAF13ENSG00000164934.9743.03280935.13300-0.331703.440602.77220HepG2HNRNPU
DCAF13ENSG00000164934.9852.890201258.07380-0.560807.281706.15840HepG2IGF2BP1
DCAF13ENSG00000164934.91141.41760868.280500.394502.775802.09970HepG2IGF2BP2
DCAF13ENSG00000164934.9566.17150767.86390-0.439602.464501.35740HepG2KHDRBS1
DCAF13ENSG00000164934.91336.96820926.236500.529403.688502.97050HepG2MATR3
DCAF13ENSG00000164934.9804.748201277.61970-0.666804.544403.28010HepG2MTPAP
DCAF13ENSG00000164934.91130.991301431.08340-0.339503.478402.62440HepG2NOL12
DCAF13ENSG00000164934.91075.89690736.669100.546402.679201.80860HepG2PABPC1
DCAF13ENSG00000164934.91143.82400853.049700.423105.515404.70550HepG2PCBP1
DCAF13ENSG00000164934.9507.02730834.06920-0.7181010.477209.09070HepG2PPIL4
DCAF13ENSG00000164934.9646.54220777.91600-0.266901.969501.30890HepG2PRPF4
DCAF13ENSG00000164934.91031.172601366.09640-0.405803.797703.11150HepG2PUF60
DCAF13ENSG00000164934.9685.50340877.17830-0.355703.765503.06990HepG2PUS1
DCAF13ENSG00000164934.92104.548601469.405500.518209.068008.25330HepG2RBM22
DCAF13ENSG00000164934.9992.078601376.32000-0.472304.733803.87260HepG2RPLP0
DCAF13ENSG00000164934.9622.76770897.82820-0.527702.836701.88280HepG2RPS10
DCAF13ENSG00000164934.9605.49890809.21550-0.418402.140501.43630HepG2RPS3A
DCAF13ENSG00000164934.91043.17930748.128000.479503.406702.54650HepG2RRP9
DCAF13ENSG00000164934.91089.80460903.713000.270002.425201.86660HepG2SF3B4
DCAF13ENSG00000164934.9985.557501309.87830-0.410406.344205.35010HepG2SLBP
DCAF13ENSG00000164934.9819.84910971.20950-0.244402.427101.81920HepG2SMN1
DCAF13ENSG00000164934.91935.431801659.624300.221702.444901.96350HepG2SRFBP1
DCAF13ENSG00000164934.91491.27950943.278200.6607013.5154012.64000HepG2SRSF1
DCAF13ENSG00000164934.91039.639701348.82400-0.375604.855404.06390HepG2SRSF5
DCAF13ENSG00000164934.9946.928601255.21030-0.406605.500404.57560HepG2SRSF7
DCAF13ENSG00000164934.9992.675401440.92020-0.5376010.040009.18020HepG2SSB
DCAF13ENSG00000164934.91344.816201533.98210-0.189901.874701.34420HepG2SUCLG1
DCAF13ENSG00000164934.9435.10340693.56330-0.672704.916103.68280HepG2SUPT6H
DCAF13ENSG00000164934.9606.08690975.86030-0.687105.469204.56920HepG2SUPV3L1
DCAF13ENSG00000164934.9785.824601220.98390-0.635806.871605.79850HepG2TARDBP
DCAF13ENSG00000164934.9507.90300908.76890-0.8394012.9625012.01650HepG2TIAL1
DCAF13ENSG00000164934.91067.550001334.62210-0.322102.657901.80310HepG2TUFM
DCAF13ENSG00000164934.91244.02320878.457600.501902.182501.61780HepG2U2AF1
DCAF13ENSG00000164934.9765.52520913.05110-0.254202.256301.61490HepG2UPF1
DCAF13ENSG00000164934.9538.39990893.65800-0.731004.725703.39620HepG2UPF2
DCAF13ENSG00000164934.91469.23570881.515000.7369017.1179015.81730HepG2UTP3
DCAF13ENSG00000164934.9690.84960960.62660-0.475603.196702.41950HepG2XRN2
DCAF13ENSG00000164934.92907.550502271.486800.356106.141505.34760K562AGGF1
DCAF13ENSG00000164934.93371.441102363.559700.512306.687805.63940K562AKAP8L
DCAF13ENSG00000164934.92965.479204443.07420-0.583308.326307.39690K562AQR
DCAF13ENSG00000164934.93325.959002479.895300.423406.975405.43190K562ATP5C1
DCAF13ENSG00000164934.92058.855002642.01300-0.359806.545905.04360K562BCLAF1
DCAF13ENSG00000164934.91833.792802501.69960-0.448102.373701.57140K562BOP1
DCAF13ENSG00000164934.9852.960301099.08800-0.365802.738601.69220K562CCAR1
DCAF13ENSG00000164934.92393.243803788.98550-0.662803.601302.36080K562CNOT7
DCAF13ENSG00000164934.91596.968802660.17900-0.736205.096004.03790K562CPSF6
DCAF13ENSG00000164934.91500.452202004.36070-0.417706.062204.41250K562CSTF2
DCAF13ENSG00000164934.94967.208104012.412700.307905.550404.67490K562DDX47
DCAF13ENSG00000164934.93631.987702543.518000.5138010.874508.90010K562DKC1
DCAF13ENSG00000164934.92457.715703409.04610-0.472109.410008.20220K562EIF2S2
DCAF13ENSG00000164934.92711.498802234.496400.279003.056202.22060K562EIF3G
DCAF13ENSG00000164934.91485.872102054.10530-0.467204.040603.05020K562EIF4A3
DCAF13ENSG00000164934.94422.868705335.09280-0.270503.618002.54540K562EIF4G2
DCAF13ENSG00000164934.91650.830402104.06740-0.350003.635102.15530K562EXOSC5
DCAF13ENSG00000164934.91803.665102706.36980-0.585403.787102.78260K562FMR1
DCAF13ENSG00000164934.91583.546902293.76260-0.534603.357802.34320K562FTO
DCAF13ENSG00000164934.92563.424802136.178400.262903.141002.50240K562FXR1
DCAF13ENSG00000164934.93390.688702603.710200.380902.392801.74190K562G3BP2
DCAF13ENSG00000164934.93727.631804543.05000-0.285402.750101.99610K562GRSF1
DCAF13ENSG00000164934.92146.125702621.99100-0.288902.837501.75110K562HNRNPA1
DCAF13ENSG00000164934.91212.028902046.26830-0.7556011.2345010.10040K562HNRNPC
DCAF13ENSG00000164934.91455.953701827.07100-0.327602.835201.67970K562HNRNPF
DCAF13ENSG00000164934.93486.206502602.213600.421803.910302.40760K562HNRNPK
DCAF13ENSG00000164934.92464.451802903.58090-0.236602.533201.67720K562HNRNPU
DCAF13ENSG00000164934.93112.988902508.416100.311402.695201.88200K562KIF1C
DCAF13ENSG00000164934.91556.839202168.46780-0.478102.847101.89710K562KRR1
DCAF13ENSG00000164934.92137.718202678.92290-0.325605.736004.59980K562MTPAP
DCAF13ENSG00000164934.93065.340301969.631900.638005.718404.28900K562NAA15
DCAF13ENSG00000164934.92150.261902976.61490-0.4692015.3519013.78650K562NSUN2
DCAF13ENSG00000164934.92940.135202057.017300.515204.544703.58360K562PRPF8
DCAF13ENSG00000164934.91271.853301834.62460-0.528605.881204.48530K562PSIP1
DCAF13ENSG00000164934.93672.360202344.183600.647509.107308.17080K562PUS1
DCAF13ENSG00000164934.92992.474402283.903800.389705.695604.87050K562RBM15
DCAF13ENSG00000164934.91331.673001673.52330-0.329602.593801.63810K562RCC2
DCAF13ENSG00000164934.92442.975702937.02390-0.265703.349002.45570K562SF3A3
DCAF13ENSG00000164934.93309.610002707.981900.289303.225102.30110K562SF3B4
DCAF13ENSG00000164934.91822.538703069.63070-0.752103.520801.98750K562SFPQ
DCAF13ENSG00000164934.9910.835501210.70390-0.410603.465402.03300K562SLBP
DCAF13ENSG00000164934.91222.127601774.08480-0.537705.215103.69080K562SRSF4
DCAF13ENSG00000164934.91755.727602114.31630-0.268103.107101.86220K562SRSF7
DCAF13ENSG00000164934.94170.051005078.97750-0.284503.139401.53890K562SUCLG1
DCAF13ENSG00000164934.91815.692402639.36420-0.539706.231605.13180K562TARDBP
DCAF13ENSG00000164934.92023.535802545.92560-0.331303.482302.54880K562TIA1
DCAF13ENSG00000164934.91079.104201764.64250-0.709508.306206.61570K562TIAL1
DCAF13ENSG00000164934.91458.550101874.33180-0.361802.776301.82810K562TRIM56
DCAF13ENSG00000164934.93723.192602524.495000.560405.731004.04020K562U2AF1
DCAF13ENSG00000164934.93430.383302607.040000.395905.517104.38610K562U2AF2
DCAF13ENSG00000164934.92379.759703156.16070-0.407408.738607.54920K562UPF1
DCAF13ENSG00000164934.91910.836102700.63880-0.499107.139305.69380K562WDR3
DCAF13ENSG00000164934.93292.902002808.270200.229603.534002.58610K562WDR43
DCAF13ENSG00000164934.93602.681005005.57950-0.474506.404705.00580K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DCAF13 is not available on ENCORE database.





4 RBPs can affect the splicing of DCAF13 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDCAF13ENSG00000164934.9chr8+104433202104433310104426941104427744104438283104438373-0.065000.000020.00047excludedK562AQR
SEDCAF13ENSG00000164934.9chr8+104444886104444969104439275104439480104447853104448014-0.054000.000550.00738excludedK562AQR
SEDCAF13ENSG00000164934.9chr8+104432491104432691104427639104427744104438283104438373-0.062000.000400.01486excludedHepG2SF3A3
A3SSDCAF13ENSG00000164934.9chr8+1044536601044538461044536821044538461044523631044524990.091000.000000.00000longerK562AQR
RIDCAF13ENSG00000164934.9chr8+1044393241044429171044393241044394801044428391044429170.062000.000100.00329includedHepG2G3BP1
RIDCAF13ENSG00000164934.9chr8+1044393241044429171044393241044394801044428391044429170.056000.000000.00000includedK562AQR
MXEDCAF13ENSG00000164934.9chr8+104432491104432691104433202104433310104427639104427744104438283104438373-0.137000.000110.024832includedHepG2SUB1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DCAF13 is not avaliable on ENCORE database.