ARFIP2

General Information

Gene Name       : ARFIP2
Gene ID             : ENSG00000132254.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ARFIP2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ARFIP2ENSG00000132254.1226.1435.9531.05ENCSR000AEF
HepG2ARFIP2ENSG00000132254.1238.0933.2435.67ENCSR985KAT
K562ARFIP2ENSG00000132254.1235.0433.1834.11ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ARFIP2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ARFIP2 RNA is bound by 18 proteins.  







eCLIP assay for ARFIP2 is not avaliable on ENCORE database.





18 proteins are bound to ARFIP2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1164989796499029-3'-UTR,CDS,intron-Distal3.950083.12746HepG2GRWD1
chr1164992826499361-3'-UTR,CDS,intron-Distal,intron-Proximal4.583536.26332HepG2GRWD1
chr1164989786499115-3'-UTR,CDS,intron-Distal4.0568010.44375K562LIN28B
chr1164990336499098-3'-UTR,CDS,intron-Distal3.467583.12941K562UCHL5
chr1164989206498979-3'-UTR,CDS,intron-Distal,intron-Proximal4.093083.31827HepG2GRWD1
chr1164990096499115-3'-UTR,CDS,intron-Distal3.012993.88708HepG2LIN28B
chr1164993336499399-3'-UTR,CDS,intron-Distal3.351883.66187K562ZNF622
chr1164989736499026-3'-UTR,CDS,intron-Distal4.794677.08889K562RBM15
chr1165016036501673-5'-UTR,CDS,intron-Distal,intron-Proximal3.643243.70637K562DDX3X
chr1165024056502543-5'-UTR,intron-Distal,intron-Proximal3.109165.60811K562SRSF1
chr1165024416502553-5'-UTR,intron-Distal,intron-Proximal4.171219.42796HepG2SRSF1
chr1165012296501290-5'-UTR,CDS,intron-Distal3.034623.60157HepG2GRWD1
chr1165012536501306-5'-UTR,CDS,intron-Distal,intron-Proximal5.077367.65840HepG2PPIG
chr1165012616501315-5'-UTR,CDS,intron-Distal,intron-Proximal3.646425.03105K562BUD13
chr1165024586502539-5'-UTR,intron-Distal,intron-Proximal3.797917.49943HepG2DDX3X
chr1165012526501335-5'-UTR,CDS,intron-Distal,intron-Proximal3.385516.68812HepG2BUD13
chr1165011266501210-CDS,intron-Distal,intron-Proximal3.804705.59977HepG2AQR
chr1165001886500253-CDS,intron-Distal,intron-Proximal3.302923.73688K562SMNDC1
chr1164999046499996-CDS,intron-Distal,intron-Proximal4.858959.76577HepG2PRPF8
chr1165004266500545-CDS,intron-Distal,intron-Proximal4.663765.90930HepG2AQR
chr1165001766500246-CDS,intron-Distal,intron-Proximal5.0870118.10508K562SF3B4
chr1165000216500110-CDS,intron-Distal,intron-Proximal3.130933.47879HepG2PPIG
chr1165004536500509-CDS,intron-Distal,intron-Proximal3.137454.38519K562BUD13
chr1165003836500483-CDS,intron-Distal,intron-Proximal3.196783.41665HepG2GRWD1
chr1165004126500511-CDS,intron-Distal,intron-Proximal4.103317.30031K562AQR
chr1165015506501615-CDS,intron-Distal,intron-Proximal3.928716.06308HepG2PPIG
chr1164999206499987-CDS,intron-Distal,intron-Proximal3.837875.28701K562PRPF8
chr1165001516500235-CDS,intron-Distal,intron-Proximal4.179557.98725K562BUD13
chr1165000816500163-CDS,intron-Distal,intron-Proximal4.122504.07395K562SRSF1
chr1164998886499969-CDS,intron-Distal,intron-Proximal4.964549.46915K562AQR
chr1164995646499631-intron-Distal3.743833.06084HepG2HNRNPK
chr1164994346499504-intron-Distal,intron-Proximal5.675407.23238HepG2SF3A3
chr1165011116501202-intron-Distal,intron-Proximal4.0991713.11100K562AQR
chr1165009796501050-intron-Distal3.748563.17235HepG2HNRNPK
chr1164998906499926-intron-Distal,intron-Proximal3.325643.26275K562BUD13
chr1164985586498595-intron-Distal3.433923.93112K562RBM15
chr1165009286501044-intron-Distal3.052305.05171K562HNRNPK
chr1164987616498846-intron-Distal3.263733.93724HepG2HNRNPK
chr1165010556501171-intron-Distal,intron-Proximal6.234599.67979K562EFTUD2
chr1165006456500739-intron-Distal4.296355.04359K562HNRNPK
chr1165013306501411-intron-Distal,intron-Proximal4.651575.47569HepG2U2AF2
chr1165010676501192-intron-Distal,intron-Proximal4.004738.46423K562PRPF8
chr1164987156498910-intron-Distal,intron-Proximal4.990966.58335HepG2QKI
chr1164986006498660-intron-Distal4.072623.83943K562HNRNPK
chr1164987466498812-intron-Distal3.804323.06617K562HNRNPK
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ARFIP2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ARFIP2 is not available on ENCORE database.

  • 68 RBPs can affect the levels of ARFIP2.  








The Knockdown/knockout RNA-Seq assay for ARFIP2 is not available on ENCORE database.





68 RBPs can affect the gene expression of ARFIP2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ARFIP2ENSG00000132254.81348.103801000.060800.430703.042102.05330HepG2ABCF1
ARFIP2ENSG00000132254.8919.78170735.488700.322503.325002.66800HepG2ACO1
ARFIP2ENSG00000132254.8439.21090654.91720-0.576404.502603.26810HepG2ADAR
ARFIP2ENSG00000132254.81443.213201000.512100.528403.985703.36460HepG2AKAP1
ARFIP2ENSG00000132254.81016.73420825.036500.301301.960201.44900HepG2BOP1
ARFIP2ENSG00000132254.81094.02150786.502700.476003.764902.87200HepG2CIRBP
ARFIP2ENSG00000132254.81173.23650735.261700.6741014.4365013.16730HepG2CKAP4
ARFIP2ENSG00000132254.8773.78310973.28530-0.330902.888702.23470HepG2CELF1
ARFIP2ENSG00000132254.8931.91050680.190800.454206.439005.24660HepG2DDX19B
ARFIP2ENSG00000132254.8920.92940649.825700.502904.505103.66270HepG2DDX21
ARFIP2ENSG00000132254.81386.65950958.407900.532804.620903.82760HepG2DDX3X
ARFIP2ENSG00000132254.8427.04250860.11400-1.010106.760305.26770HepG2DDX59
ARFIP2ENSG00000132254.8753.81210560.994500.426102.753201.64770HepG2EFTUD2
ARFIP2ENSG00000132254.81055.836101424.48500-0.432106.130405.29590HepG2ETF1
ARFIP2ENSG00000132254.8494.58550828.96880-0.745107.517406.40860HepG2HNRNPK
ARFIP2ENSG00000132254.8897.94070696.710000.366002.791901.83770HepG2HNRNPM
ARFIP2ENSG00000132254.8887.33000751.454500.239702.226401.56120HepG2ILF2
ARFIP2ENSG00000132254.81709.521701121.128000.608504.914803.79810HepG2LARP4
ARFIP2ENSG00000132254.81200.15170887.741900.434902.882202.23930HepG2MATR3
ARFIP2ENSG00000132254.81018.71040817.248200.317802.294601.55560HepG2MSI2
ARFIP2ENSG00000132254.8502.91110686.25350-0.448403.430202.07500HepG2NAA15
ARFIP2ENSG00000132254.81488.54210908.650000.712007.563706.54110HepG2NCBP2
ARFIP2ENSG00000132254.8445.71480726.53640-0.704906.240905.14460HepG2NSUN2
ARFIP2ENSG00000132254.81305.34110888.045700.555609.421608.41050HepG2PCBP1
ARFIP2ENSG00000132254.8799.01460990.52840-0.310002.025001.50330HepG2PUF60
ARFIP2ENSG00000132254.8915.98300749.133100.290002.830202.20960HepG2PUS1
ARFIP2ENSG00000132254.8759.59100978.65150-0.365603.280402.60840HepG2QKI
ARFIP2ENSG00000132254.8821.177701057.97510-0.365503.131202.22350HepG2RBM15
ARFIP2ENSG00000132254.8758.09700936.60370-0.305102.766102.14970HepG2RECQL
ARFIP2ENSG00000132254.81036.703401242.65240-0.261401.889401.31270HepG2RPLP0
ARFIP2ENSG00000132254.8801.86650531.637900.592805.671704.82730HepG2RPS19
ARFIP2ENSG00000132254.8841.62370655.134700.361303.838703.10100HepG2SAFB2
ARFIP2ENSG00000132254.8401.15920619.83710-0.627704.062702.49060HepG2SART3
ARFIP2ENSG00000132254.81629.630001019.322300.676805.697904.70980HepG2SF3A3
ARFIP2ENSG00000132254.81187.48320940.791200.335903.578902.91870HepG2SF3B4
ARFIP2ENSG00000132254.81871.884601344.723300.477109.329808.55950HepG2SRFBP1
ARFIP2ENSG00000132254.8583.74390872.66510-0.580103.851102.64920HepG2SRSF3
ARFIP2ENSG00000132254.81454.445301167.514500.316903.940803.35240HepG2SSB
ARFIP2ENSG00000132254.8956.97290681.849700.488904.945803.70860HepG2SUPT6H
ARFIP2ENSG00000132254.8719.97520882.62100-0.293802.300201.78100HepG2TAF15
ARFIP2ENSG00000132254.8637.96780811.02690-0.346302.654101.83330HepG2TIA1
ARFIP2ENSG00000132254.8866.42860721.227800.264502.251801.73260HepG2TRIM56
ARFIP2ENSG00000132254.81146.49690903.984500.342804.059403.23800HepG2UPF1
ARFIP2ENSG00000132254.81069.69660872.759300.293402.846802.24290HepG2UTP3
ARFIP2ENSG00000132254.81749.078201355.886100.367303.424502.69620K562AKAP8L
ARFIP2ENSG00000132254.82167.520201454.975900.575006.950906.09000K562AQR
ARFIP2ENSG00000132254.81664.611001422.663100.226502.090401.30540K562ATP5C1
ARFIP2ENSG00000132254.81962.957101533.739100.355905.313104.45140K562DDX47
ARFIP2ENSG00000132254.81767.829301458.989900.276903.098202.16380K562DKC1
ARFIP2ENSG00000132254.81126.45280698.262300.689807.239005.70440K562EFTUD2
ARFIP2ENSG00000132254.81487.10810747.517500.992204.646103.26520K562EIF3D
ARFIP2ENSG00000132254.8816.53570540.781300.594407.466006.16800K562EIF3G
ARFIP2ENSG00000132254.81206.34480781.507100.626207.245105.92260K562EIF4A3
ARFIP2ENSG00000132254.8325.48880618.00850-0.925002.742502.03970K562G3BP2
ARFIP2ENSG00000132254.82046.768801611.947300.344403.402602.37690K562MBNL1
ARFIP2ENSG00000132254.81319.809201086.723600.280202.993402.15350K562MTPAP
ARFIP2ENSG00000132254.81016.81930725.670200.486603.961902.33290K562PCBP1
ARFIP2ENSG00000132254.8882.62400660.214200.418802.801201.81610K562PCBP2
ARFIP2ENSG00000132254.81086.47820839.022000.372802.838601.39430K562PHF6
ARFIP2ENSG00000132254.8971.28660679.492400.515304.118303.20310K562PRPF8
ARFIP2ENSG00000132254.8980.35650770.489300.347402.665301.78040K562PSIP1
ARFIP2ENSG00000132254.81634.877001344.620700.281902.183501.68970K562PUS1
ARFIP2ENSG00000132254.81654.935501310.168600.336902.632702.05300K562RBM15
ARFIP2ENSG00000132254.82163.830901194.874300.856604.118102.14180K562RBM39
ARFIP2ENSG00000132254.81222.55320692.059800.820808.674707.21340K562RPS19
ARFIP2ENSG00000132254.82000.74100888.200601.171506.361204.29440K562SF1
ARFIP2ENSG00000132254.81701.190001191.427300.513808.447407.08260K562SF3A3
ARFIP2ENSG00000132254.81240.33820641.734700.950606.935505.54260K562SF3B4
ARFIP2ENSG00000132254.81704.251101082.793500.654302.628701.37470K562SFPQ
ARFIP2ENSG00000132254.81664.115601020.067400.706002.973201.68500K562SNRNP200
ARFIP2ENSG00000132254.81423.657701220.638900.221902.294101.43350K562SRPK2
ARFIP2ENSG00000132254.8930.92670706.938000.397003.309502.54050K562SRSF1
ARFIP2ENSG00000132254.81008.01270715.342300.494703.656502.83870K562TARDBP
ARFIP2ENSG00000132254.8921.04710617.986700.575602.118101.41580K562U2AF2
ARFIP2ENSG00000132254.81491.555601280.312200.220202.188201.54390K562UPF1
ARFIP2ENSG00000132254.81456.695201139.193500.354605.171804.04560K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ARFIP2 is not available on ENCORE database.





16 RBPs can affect the splicing of ARFIP2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEARFIP2ENSG00000132254.8chr11-6499808649988264993136499428649996765001890.178000.000360.00894includedK562SF3B4
SEARFIP2ENSG00000132254.8chr11-649980864998826499285649942864999676500189-0.091000.000530.04774excludedK562XRCC6
SEARFIP2ENSG00000132254.8chr11-649980864998826499313649942864999676500189-0.086000.000100.03569excludedK562PUM1
SEARFIP2ENSG00000132254.8chr11-6499808649988264993136499428649996765001890.531000.000000.00000includedHepG2HNRNPK
SEARFIP2ENSG00000132254.8chr11-649980864998826499285649942864999676500189-0.094000.000050.00146excludedK562PUS1
SEARFIP2ENSG00000132254.8chr11-649980864998826499285649942864999676500189-0.092000.000110.02896excludedK562MTPAP
SEARFIP2ENSG00000132254.8chr11-649980864998826499285649942864999676500189-0.091000.000870.05918excludedK562HNRNPUL1
SEARFIP2ENSG00000132254.8chr11-6499808649988264993136499428649996765001890.154000.000020.02473includedK562LARP7
SEARFIP2ENSG00000132254.8chr11-649980864998826499285649942864999676500189-0.086000.001250.04031excludedK562UTP18
SEARFIP2ENSG00000132254.8chr11-649980864998826499285649942864999676500189-0.096000.000230.00591excludedK562U2AF2
SEARFIP2ENSG00000132254.8chr11-649980864998826499285649942864999676500189-0.079000.001630.03952excludedK562RBM15
SEARFIP2ENSG00000132254.8chr11-649980864998826499313649942864999676500189-0.147000.000000.00021excludedK562ZC3H8
SEARFIP2ENSG00000132254.8chr11-6499808649988264992856499428649996765001890.583000.000000.00000includedK562HNRNPK
SEARFIP2ENSG00000132254.8chr11-6499808649988264992856499428649996765001890.096000.003270.04993includedK562HNRNPC
A3SSARFIP2ENSG00000132254.8chr11-6500369650055765003696500488650120165012980.113000.000000.00013longerHepG2NCBP2
A3SSARFIP2ENSG00000132254.8chr11-6501201650140965012016501298650155265017350.302000.000000.00000longerK562AQR
A3SSARFIP2ENSG00000132254.8chr11-6501552650173565015526501693650246065026660.142000.000020.00017longerK562AQR
A3SSARFIP2ENSG00000132254.8chr11-6500369650058765003696500488650120165012980.325000.000000.00000longerK562AQR
A3SSARFIP2ENSG00000132254.8chr11-6500088650027265000886500189650036965004880.058000.001190.00815longerK562AQR
A3SSARFIP2ENSG00000132254.8chr11-6499285649948264992856499428649980864998820.199000.000680.00492longerK562AQR
RIARFIP2ENSG00000132254.8chr11-650053565012986500535650068465012016501298-0.264000.000140.00468excludedK562U2AF1
RIARFIP2ENSG00000132254.8chr11-6500535650129865005356500684650120165012980.449000.007350.04829includedHepG2SF3B4
MXEARFIP2ENSG00000132254.8chr11-649996765001896501201650133964992706499428650155265016930.114000.000000.000011includedK562AQR
MXEARFIP2ENSG00000132254.8chr11-649996765001896501201650140964992706499428650155265016930.075000.000200.002211includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ARFIP2 is not avaliable on ENCORE database.