PRELID2

General Information

Gene Name       : PRELID2
Gene ID             : ENSG00000186314.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PRELID2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PRELID2ENSG00000186314.110.070.090.08ENCSR000AEF
HepG2PRELID2ENSG00000186314.116.0510.428.23ENCSR985KAT
K562PRELID2ENSG00000186314.1115.5216.0915.80ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PRELID2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PRELID2 RNA is bound by 23 proteins.  







eCLIP assay for PRELID2 is not avaliable on ENCORE database.





23 proteins are bound to PRELID2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5145214759145214909-5'-UTR,CDS,intron-Distal,intron-Proximal5.0745710.32964HepG2DDX3X
chr5145214788145214911-5'-UTR,CDS,intron-Distal,intron-Proximal4.648104.78731HepG2NCBP2
chr5145199507145199582-CDS,intron-Distal,intron-Proximal3.620223.32039HepG2PPIG
chr5145199543145199583-CDS,intron-Distal,intron-Proximal3.257164.34695HepG2BCLAF1
chr5145197482145197623-CDS,intron-Distal,intron-Proximal3.3630911.85307HepG2BCLAF1
chr5145197520145197603-CDS,intron-Distal3.499723.93645HepG2PPIG
chr5145116544145116653-intron-Distal6.6090118.22263K562PTBP1
chr5145199357145199482-intron-Distal,intron-Proximal3.196243.13218K562PRPF8
chr5145127089145127113-intron-Distal4.118213.59909K562EXOSC5
chr5145037842145037924-intron-Distal4.619134.79321K562RBFOX2
chr5145078905145078972-intron-Distal4.991927.89429K562TARDBP
chr5144934133144934226-intron-Distal3.249703.35050HepG2SUGP2
chr5145169154145169199-intron-Distal4.269507.31365K562EXOSC5
chr5145122216145122318-intron-Distal3.887055.03657K562PTBP1
chr5144989913144989987-intron-Distal4.297883.75920K562SLTM
chr5145116547145116656-intron-Distal5.576839.51434HepG2PTBP1
chr5145102699145102836-intron-Distal3.851863.59342K562CSTF2T
chr5144991866144991986-intron-Distal3.272074.52210K562KHSRP
chr5145004740145004820-intron-Distal4.015383.88340K562TARDBP
chr5145200697145200765-intron-Distal4.726585.41154K562HNRNPL
chr5145117188145117266-intron-Distal3.086824.63410HepG2SUGP2
chr5145092444145092587-intron-Distal4.536754.40847HepG2PTBP1
chr5145127795145127854-intron-Distal3.4861112.73030K562EXOSC5
chr5144989937144990008-intron-Distal3.570495.76048K562SAFB2
chr5144902355144902439-intron-Distal4.571866.11515K562PTBP1
chr5145101667145101733-intron-Distal3.421354.30679K562KHSRP
chr5144887434144887492-intron-Distal4.363554.55788HepG2QKI
chr5145189424145189632-intron-Distal4.440585.41654K562KHSRP
chr5144983743144983830-intron-Distal3.738603.43228K562SAFB2
chr5145125344145125428-intron-Distal3.749705.54651HepG2SUGP2
chr5144987184144987372-intron-Distal3.506993.02891HepG2HNRNPL
chr5145168919145168978-intron-Distal4.261098.51158K562EXOSC5
chr5145126736145126794-intron-Distal6.1014915.32150K562EXOSC5
chr5145105685145105786-intron-Distal3.9741010.33353HepG2PTBP1
chr5145168416145168450-intron-Distal3.444253.43875K562EXOSC5
chr5145177278145177386-intron-Distal4.263894.79321K562RBFOX2
chr5145127790145127858-intron-Distal3.839983.29248HepG2SUGP2
chr5144902305144902355-intron-Distal5.215016.90462K562PTBP1
chr5145099066145099172-intron-Distal3.416054.93120K562KHSRP
chr5145198834145198914-intron-Distal,intron-Proximal3.339123.77680K562TIA1
chr5145198859145198925-intron-Distal,intron-Proximal3.301303.71919HepG2TIAL1
chr5145108121145108211-intron-Distal4.381269.63457K562KHSRP
chr5145201006145201074-intron-Distal4.393585.18391K562HNRNPL
chr5145119960145120119-intron-Distal3.055994.56635K562KHSRP
chr5145105814145105880-intron-Distal4.331978.88160HepG2PTBP1
chr5145200448145200580-intron-Distal3.052975.65589K562HNRNPL
chr5144991875144992004-intron-Distal4.043294.22598K562CSTF2T
chr5145071886145071943-intron-Distal3.898153.34609K562TARDBP
chr5145203924145203995-intron-Distal5.719438.34017K562AGGF1
chr5145168715145168772-intron-Distal4.758274.80399K562EXOSC5
chr5145103438145103502-intron-Distal3.751803.42844K562KHSRP
chr5145212272145212370-intron-Distal4.478385.44904K562TARDBP
chr5145098729145098857-intron-Distal3.465504.72029K562MATR3
chr5145144633145144796-intron-Distal,intron-Proximal3.992463.66668K562KHSRP
chr5145102704145102794-intron-Distal3.989518.41610K562KHSRP
chr5145124218145124279-intron-Distal3.998923.34098HepG2HNRNPM
chr5145203960145204023-intron-Distal5.254028.16758K562HNRNPL
chr5145124216145124307-intron-Distal4.536025.01910HepG2MATR3
chr5145168772145168838-intron-Distal4.118216.10949K562EXOSC5
chr5145102808145102982-intron-Distal3.788744.97883K562CPSF6
chr5145169386145169423-intron-Distal3.431024.31658K562EXOSC5
chr5145125352145125427-intron-Distal3.483486.40701K562EXOSC5
chr5145135867145135963-intron-Distal3.366698.76942K562KHSRP
chr5145200922145201002-intron-Distal3.017785.07828K562HNRNPL
chr5145101470145101556-intron-Distal5.3726212.87275K562KHSRP
chr5145203911145204055-intron-Distal3.750586.39350HepG2HNRNPL
chr5145173542145173607-intron-Distal3.255163.86835HepG2QKI
chr5145085448145085531-intron-Distal3.854413.08314K562TARDBP
chr5144894604144894651-intron-Distal4.348554.80399K562EXOSC5
chr5144963449144963513-intron-Distal5.346059.68215K562EXOSC5
chr5145117721145117818-intron-Distal3.335936.36326HepG2SUGP2
chr5144961850144961940-intron-Distal3.841035.50856K562EXOSC5
chr5145122238145122358-intron-Distal4.189233.72005K562MATR3
chr5145137203145137299-intron-Distal3.9830011.58326K562UPF1
chr5145101556145101667-intron-Distal4.9412317.71609K562KHSRP
chr5145004514145004608-intron-Distal4.398245.91698K562KHSRP
chr5145103618145103691-intron-Distal4.138554.14103K562KHSRP
chr5145124215145124330-intron-Distal4.385063.45817K562MATR3
chr5145101368145101431-intron-Distal3.162203.48890K562KHSRP
chr5144902302144902450-intron-Distal4.581048.21761HepG2PTBP1
chr5145124172145124345-intron-Distal5.725729.02315K562EXOSC5
chr5145200757145200814-intron-Distal3.924523.51804HepG2HNRNPL
chr5145127854145127911-intron-Distal4.926556.73640K562EXOSC5
chr5145126794145126823-intron-Distal4.399158.21369K562EXOSC5
chr5144962502144962558-intron-Distal4.236737.91454K562EXOSC5
chr5145168495145168542-intron-Distal4.611314.48623K562EXOSC5
chr5144895211144895268-intron-Distal4.375503.89085K562EXOSC5
chr5145105822145105829-intron-Distal4.939643.42734K562PTBP1
chr5145106418145106525-intron-Distal4.428283.91475K562PTBP1
chr5144963305144963355-intron-Distal4.799505.12432K562EXOSC5
chr5145201594145201674-intron-Distal4.350344.89313K562HNRNPL
chr5145125840145125873-intron-Distal4.014993.30696K562EXOSC5
chr5145105682145105784-intron-Distal5.4842526.19104K562PTBP1
chr5145117743145117799-intron-Distal3.297803.10961HepG2MATR3
chr5145092461145092538-intron-Distal3.685563.27944K562PTBP1
chr5145201143145201248-intron-Distal4.269248.24016K562HNRNPL
chr5144895364144895408-intron-Distal3.903793.01445K562EXOSC5
chr5145200686145200763-intron-Distal4.692117.03111K562AGGF1
chr5145206707145206803-intron-Distal4.003773.04224HepG2SUGP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PRELID2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PRELID2 is not available on ENCORE database.

  • 100 RBPs can affect the levels of PRELID2.  








The Knockdown/knockout RNA-Seq assay for PRELID2 is not available on ENCORE database.





100 RBPs can affect the gene expression of PRELID2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PRELID2ENSG00000186314.7147.37270311.32120-1.078907.511306.06470HepG2ABCF1
PRELID2ENSG00000186314.7163.87230250.98850-0.615003.790503.09980HepG2ACO1
PRELID2ENSG00000186314.7131.95840345.29450-1.3877010.644509.66860HepG2AKAP1
PRELID2ENSG00000186314.7164.15490252.13120-0.619103.706702.83200HepG2AKAP8L
PRELID2ENSG00000186314.7178.94630285.69970-0.675003.420102.54870HepG2ASCC1
PRELID2ENSG00000186314.7111.77440188.70260-0.755502.461301.89300HepG2BOP1
PRELID2ENSG00000186314.7161.42250275.90040-0.773304.687003.71570HepG2CALR
PRELID2ENSG00000186314.7103.77490250.89010-1.2736012.0667010.87680HepG2CKAP4
PRELID2ENSG00000186314.7147.45070232.10820-0.654604.279103.26960HepG2DDX19B
PRELID2ENSG00000186314.7131.78020203.89560-0.629702.960401.76720HepG2DDX1
PRELID2ENSG00000186314.7126.47700207.73900-0.715903.311102.57350HepG2DDX21
PRELID2ENSG00000186314.7188.23370330.76060-0.813304.906404.09250HepG2DDX3X
PRELID2ENSG00000186314.7180.35810284.14290-0.655802.974902.33670HepG2DDX6
PRELID2ENSG00000186314.7112.35220240.11660-1.095708.176207.13080HepG2DKC1
PRELID2ENSG00000186314.7145.58100198.16760-0.444902.013801.44080HepG2DNAJC2
PRELID2ENSG00000186314.7137.74190237.83540-0.788003.682202.63050HepG2EEF2
PRELID2ENSG00000186314.7120.61110198.26370-0.717103.179601.99160HepG2EFTUD2
PRELID2ENSG00000186314.7164.63630236.07570-0.520002.429901.33730HepG2EIF2S2
PRELID2ENSG00000186314.798.11810193.06470-0.976504.601703.45730HepG2EIF3D
PRELID2ENSG00000186314.7120.48990196.27200-0.703903.334702.16380HepG2EIF3G
PRELID2ENSG00000186314.786.21440301.84670-1.8078016.4270014.87950HepG2EIF4A3
PRELID2ENSG00000186314.7122.29270293.90180-1.265007.645506.53150HepG2EIF4B
PRELID2ENSG00000186314.7145.46830277.94480-0.934107.219405.98170HepG2EIF4G1
PRELID2ENSG00000186314.7163.95910297.20050-0.858106.331405.48390HepG2ETF1
PRELID2ENSG00000186314.7141.28920245.22170-0.795404.785903.69290HepG2EWSR1
PRELID2ENSG00000186314.7190.00040314.33530-0.726303.783302.89460HepG2FIP1L1
PRELID2ENSG00000186314.7199.52300304.56910-0.610203.035702.31050HepG2FXR1
PRELID2ENSG00000186314.796.33430282.52280-1.5522012.8889011.50720HepG2G3BP1
PRELID2ENSG00000186314.7109.21940171.89780-0.654302.521801.67110HepG2GEMIN5
PRELID2ENSG00000186314.797.27840207.16960-1.090605.099703.71080HepG2GNB2L1
PRELID2ENSG00000186314.799.57400196.33440-0.979503.046902.37940HepG2GPKOW
PRELID2ENSG00000186314.752.73380117.37290-1.154304.093202.74220HepG2GRSF1
PRELID2ENSG00000186314.794.34020201.84620-1.097305.987005.08640HepG2HNRNPA1
PRELID2ENSG00000186314.761.05880224.51730-1.8786014.1448012.69380HepG2HNRNPC
PRELID2ENSG00000186314.7148.69910286.10260-0.944105.852104.86530HepG2HNRNPK
PRELID2ENSG00000186314.7147.73470216.81020-0.553402.620001.69230HepG2HNRNPM
PRELID2ENSG00000186314.7102.22490223.03290-1.125508.960207.91740HepG2HNRNPU
PRELID2ENSG00000186314.7130.38660287.17480-1.139108.027606.94000HepG2IGF2BP2
PRELID2ENSG00000186314.7151.54600269.51510-0.830602.681601.71430HepG2IGF2BP3
PRELID2ENSG00000186314.7181.92940288.85520-0.667002.906901.87600HepG2KHSRP
PRELID2ENSG00000186314.7138.47640378.36160-1.4501012.2978010.55880HepG2LARP4
PRELID2ENSG00000186314.7103.38510304.67550-1.5592013.2995011.90770HepG2MAGOH
PRELID2ENSG00000186314.7187.01700306.37780-0.712103.538902.83350HepG2MATR3
PRELID2ENSG00000186314.7130.28910313.59220-1.267209.742408.59590HepG2NCBP2
PRELID2ENSG00000186314.7147.85790279.26310-0.917405.665304.64420HepG2PABPC4
PRELID2ENSG00000186314.7140.02550220.76340-0.656803.587202.63470HepG2PARN
PRELID2ENSG00000186314.7108.39950271.51090-1.3247012.8127011.65880HepG2PCBP1
PRELID2ENSG00000186314.7116.22550276.26430-1.2491011.3394010.37920HepG2PTBP1
PRELID2ENSG00000186314.7181.71450266.66410-0.553402.594602.01510HepG2PUF60
PRELID2ENSG00000186314.7117.17060283.08420-1.2726012.7118011.63770HepG2PUM1
PRELID2ENSG00000186314.7110.68750282.87220-1.3537011.7651010.43560HepG2PUM2
PRELID2ENSG00000186314.7153.60570255.64160-0.734905.130804.33890HepG2PUS1
PRELID2ENSG00000186314.7111.00450248.40980-1.162108.177207.39580HepG2RBM22
PRELID2ENSG00000186314.7189.70820271.55350-0.517502.541001.89210HepG2RBM25
PRELID2ENSG00000186314.7142.14620244.64120-0.783302.310801.41290HepG2RBM27
PRELID2ENSG00000186314.7120.10110198.65820-0.726002.469901.46850HepG2RCC2
PRELID2ENSG00000186314.7120.79970307.46250-1.3478013.0379012.02220HepG2NELFE
PRELID2ENSG00000186314.7181.21300286.34710-0.660104.179403.44260HepG2RECQL
PRELID2ENSG00000186314.789.16750162.72810-0.867903.998803.20200HepG2RPLP0
PRELID2ENSG00000186314.774.79600187.86570-1.328708.446207.44190HepG2RPS19
PRELID2ENSG00000186314.785.42480225.64660-1.401306.246005.07160HepG2RPS2
PRELID2ENSG00000186314.7116.28200230.31190-0.986004.603803.20270HepG2RPS5
PRELID2ENSG00000186314.748.07680103.28260-1.103202.864502.06640HepG2RRP9
PRELID2ENSG00000186314.7270.92310198.620200.447802.404201.79730HepG2SAFB2
PRELID2ENSG00000186314.7105.87700188.54420-0.832503.985002.85750HepG2SERBP1
PRELID2ENSG00000186314.7113.45080292.35270-1.3656010.251208.88690HepG2SF3A3
PRELID2ENSG00000186314.7114.29270287.64160-1.3315012.4940011.37910HepG2SF3B4
PRELID2ENSG00000186314.7134.21200231.62400-0.787305.065504.23830HepG2SMN1
PRELID2ENSG00000186314.7208.10110128.835700.691703.107701.38470HepG2SRP68
PRELID2ENSG00000186314.7147.86250300.22950-1.021808.273507.55580HepG2SRSF1
PRELID2ENSG00000186314.7143.11030263.30220-0.879606.252505.36540HepG2SRSF5
PRELID2ENSG00000186314.795.40620148.40300-0.637402.683401.99800HepG2SRSF7
PRELID2ENSG00000186314.7133.72180244.24750-0.869106.300305.52740HepG2SRSF9
PRELID2ENSG00000186314.7128.90110243.62460-0.918406.065605.36100HepG2SSB
PRELID2ENSG00000186314.7177.29340299.43840-0.756105.569104.74330HepG2SUCLG1
PRELID2ENSG00000186314.799.59720195.51310-0.973103.216602.06770HepG2TBRG4
PRELID2ENSG00000186314.794.62300216.71530-1.195508.251307.47110HepG2TIAL1
PRELID2ENSG00000186314.789.42290153.40950-0.778702.944501.32870HepG2TROVE2
PRELID2ENSG00000186314.7134.48360260.53340-0.954006.093704.73010HepG2TUFM
PRELID2ENSG00000186314.7122.83220268.83220-1.130007.767506.71920HepG2U2AF1
PRELID2ENSG00000186314.7156.52170366.67620-1.228103.509502.39430HepG2U2AF2
PRELID2ENSG00000186314.733.3909079.55800-1.252603.492702.64400HepG2UCHL5
PRELID2ENSG00000186314.7185.61190259.27250-0.482202.608601.92660HepG2UPF1
PRELID2ENSG00000186314.7188.59390266.49310-0.498802.646201.61730HepG2UTP18
PRELID2ENSG00000186314.7156.09850250.31690-0.681304.062003.35680HepG2UTP3
PRELID2ENSG00000186314.7105.09070267.00790-1.345202.580001.56090HepG2XRCC6
PRELID2ENSG00000186314.7121.28600186.22200-0.618602.860402.17950HepG2ZC3H8
PRELID2ENSG00000186314.7153.67430285.14960-0.891807.788006.99140HepG2ZNF622
PRELID2ENSG00000186314.7807.48170661.783000.287002.107701.60040K562AGGF1
PRELID2ENSG00000186314.7188.67480471.62580-1.321707.682506.78550K562AQR
PRELID2ENSG00000186314.7976.32010722.566200.434105.066603.78900K562ATP5C1
PRELID2ENSG00000186314.7126.21730227.26160-0.848404.564903.37720K562EFTUD2
PRELID2ENSG00000186314.7153.35640243.34760-0.666102.954801.88180K562EIF3D
PRELID2ENSG00000186314.7172.96950373.62980-1.1111010.625108.99620K562EIF4A3
PRELID2ENSG00000186314.7504.83440380.929000.406202.276801.50710K562FIP1L1
PRELID2ENSG00000186314.7234.37810388.56150-0.729306.067905.22350K562FXR1
PRELID2ENSG00000186314.7590.57460398.585600.567103.286102.50300K562G3BP2
PRELID2ENSG00000186314.7185.67640396.86710-1.0959010.321108.77060K562GPKOW
PRELID2ENSG00000186314.7173.65950405.72310-1.224207.283206.04390K562GRSF1
PRELID2ENSG00000186314.7153.10680352.81630-1.2044010.847209.72990K562HNRNPC
PRELID2ENSG00000186314.7223.33890315.04930-0.496302.391001.34270K562HNRNPF
PRELID2ENSG00000186314.7255.85840433.15540-0.759504.843003.16330K562HNRNPK
PRELID2ENSG00000186314.7269.01540368.49140-0.453902.758601.86560K562HNRNPU
PRELID2ENSG00000186314.7306.24950455.74000-0.573504.358903.29970K562MAGOH
PRELID2ENSG00000186314.7265.74060414.08010-0.639905.435904.32510K562MTPAP
PRELID2ENSG00000186314.7804.99350573.811600.488302.901701.99510K562NAA15
PRELID2ENSG00000186314.7271.85210405.53060-0.577003.043402.01720K562PCBP2
PRELID2ENSG00000186314.7126.67240221.15120-0.803903.663402.80020K562PRPF8
PRELID2ENSG00000186314.7362.73290642.14840-0.824007.854206.46960K562PUF60
PRELID2ENSG00000186314.7530.91500669.22680-0.334002.489401.57760K562PUM2
PRELID2ENSG00000186314.71142.35210682.826900.742309.134708.19620K562PUS1
PRELID2ENSG00000186314.7945.22870665.398900.506306.064905.21280K562RBM15
PRELID2ENSG00000186314.7294.98080446.86620-0.599203.925902.59560K562NELFE
PRELID2ENSG00000186314.7143.51710225.28140-0.650502.373901.61930K562RPS19
PRELID2ENSG00000186314.7347.49110453.98520-0.385702.418401.65160K562SF3A3
PRELID2ENSG00000186314.7277.52540414.40220-0.578404.376303.29170K562SF3B4
PRELID2ENSG00000186314.7167.12430273.57850-0.711003.741202.49630K562SRFBP1
PRELID2ENSG00000186314.7210.01900434.03660-1.0473010.694509.31470K562SRSF1
PRELID2ENSG00000186314.7180.80290439.31950-1.2809014.2489012.40090K562TARDBP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PRELID2 is not available on ENCORE database.





4 RBPs can affect the splicing of PRELID2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPRELID2ENSG00000186314.7chr5-1452055601452057631452026391452026971452147391452148990.213000.000050.00473includedHepG2SFPQ
SEPRELID2ENSG00000186314.7chr5-1452055601452057631452026391452026971452147391452148990.433000.000430.02228includedHepG2MATR3
SEPRELID2ENSG00000186314.7chr5-1452055601452057631452026391452026971452147391452148990.268000.000020.02473includedK562LARP7
SEPRELID2ENSG00000186314.7chr5-145176004145176110145144493145144563145197456145197617-0.110000.001360.02589excludedK562U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PRELID2 is not avaliable on ENCORE database.