7SK

General Information

Gene Name       : 7SK
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: 7SK)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for 7SK is not avaliable on ENCORE database.



Proteins bound to RNA
  • 7SK RNA is bound by 1 proteins.  







eCLIP assay for 7SK is not avaliable on ENCORE database.





1 proteins are bound to 7SK RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr212647349126473549+intron-Proximal5.475484.45147K562LARP7
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for 7SK is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for 7SK is not available on ENCORE database.

  • 2 RBPs can affect the levels of 7SK.  








The Knockdown/knockout RNA-Seq assay for 7SK is not available on ENCORE database.





2 RBPs can affect the gene expression of 7SK :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
7SKENSG00000260682.222.326300.0000099999.999905.345104.42710HepG2PUM2
7SKENSG00000260682.216.128203.098902.379602.106201.31490K562FTO
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for 7SK is not available on ENCORE database.






No RBPs affect the alternative splcing events of 7SK on ENCORE database.





The Knockdown/knockout RNA-Seq assay for 7SK is not avaliable on ENCORE database.