SNHG12

General Information

Gene Name       : SNHG12
Gene ID             : ENSG00000197989.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SNHG12)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SNHG12ENSG00000197989.1441.3332.1036.72ENCSR000AEF
HepG2SNHG12ENSG00000197989.1432.0438.9335.48ENCSR985KAT
K562SNHG12ENSG00000197989.1443.0040.6641.83ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SNHG12 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SNHG12 RNA is bound by 32 proteins.  







eCLIP assay for SNHG12 is not avaliable on ENCORE database.





32 proteins are bound to SNHG12 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12890697428906984-intron-Distal,intron-Proximal4.38293400.00000HepG2DKC1
chr12890798428908058-intron-Distal4.1778916.68897K562PRPF8
chr12890748128907506-intron-Distal4.15032400.00000HepG2DKC1
chr12890628928906296-intron-Distal4.31644400.00000HepG2NOLC1
chr12890629428906308-intron-Distal3.0063811.20790K562TBRG4
chr12890774128907769-intron-Distal,intron-Proximal5.492118.83608K562AQR
chr12890527328905283-intron-Distal5.4289779.19470K562AATF
chr12890598728906016-intron-Distal,intron-Proximal3.720038.32276HepG2EFTUD2
chr12890527128905289-intron-Distal4.53213400.00000HepG2DKC1
chr12890524928905371-intron-Distal3.621937.65588K562ZC3H11A
chr12890750628907510-intron-Distal,intron-Proximal4.45568400.00000HepG2DKC1
chr12890627728906289-intron-Distal5.02172400.00000HepG2NOLC1
chr12890617228906233-intron-Distal,intron-Proximal4.746596.24070HepG2SRSF1
chr12890781528907850-intron-Distal,intron-Proximal3.774426.05904K562RBFOX2
chr12890751128907523-intron-Distal,intron-Proximal4.31980400.00000HepG2DKC1
chr12890629728906310-intron-Distal3.57362400.00000HepG2NOLC1
chr12890532028905332-intron-Distal4.649835.90758K562SSB
chr12890515728905193-intron-Distal3.869473.63122HepG2PRPF4
chr12890528828905301-intron-Distal4.16839400.00000K562SMNDC1
chr12890798528908060-intron-Distal4.6167624.76409K562EFTUD2
chr12890706828907156-intron-Distal,intron-Proximal3.8487816.28136HepG2GRWD1
chr12890806228908105-intron-Distal5.7132712.49979HepG2AQR
chr12890512828905194-intron-Distal3.341814.25887K562SRSF1
chr12890526728905272-intron-Distal5.2875722.87065HepG2LARP7
chr12890526428905323-intron-Distal3.301707.41082K562UTP18
chr12890695728906960-intron-Distal4.78235400.00000HepG2DKC1
chr12890693728906942-intron-Distal4.32252400.00000HepG2DKC1
chr12890767428907747-intron-Distal,intron-Proximal3.531857.97516HepG2GRWD1
chr12890530128905309-intron-Distal3.7635551.14754K562SMNDC1
chr12890645228906494-intron-Distal,intron-Proximal4.4813024.45722HepG2PPIG
chr12890800428908054-intron-Distal4.9306628.71690K562AQR
chr12890518728905193-intron-Distal3.9234111.35339HepG2PPIG
chr12890632128906330-intron-Distal,intron-Proximal6.87021400.00000HepG2DKC1
chr12890602928906075-intron-Distal,intron-Proximal3.499596.38589HepG2LSM11
chr12890752728907556-intron-Distal,intron-Proximal3.65389400.00000HepG2DKC1
chr12890799528908072-intron-Distal4.435704.17531HepG2RBFOX2
chr12890611128906169-intron-Distal,intron-Proximal3.665147.76460HepG2EFTUD2
chr12890528528905293-intron-Distal5.88255400.00000HepG2NOLC1
chr12890673428906809-intron-Distal,intron-Proximal3.615276.19622K562HNRNPC
chr12890596428906009-intron-Distal,intron-Proximal3.410815.67367K562RBM22
chr12890696028906967-intron-Distal4.82010400.00000HepG2DKC1
chr12890530328905310-intron-Distal4.59931400.00000HepG2DKC1
chr12890805428908101-intron-Distal6.0652925.00748K562AQR
chr12890549128905534-intron-Distal4.539913.60282K562LSM11
chr12890757928907601-intron-Distal,intron-Proximal4.809517.35664HepG2BUD13
chr12890628228906288-intron-Distal3.6881649.24717K562SMNDC1
chr12890597528906043-intron-Distal,intron-Proximal4.7775410.60410K562AQR
chr12890694228906949-intron-Distal4.34062400.00000HepG2DKC1
chr12890526628905284-intron-Distal3.1912015.82548K562TRA2A
chr12890680928906826-intron-Distal,intron-Proximal3.238084.53684K562HNRNPC
chr12890707028907078-intron-Distal,intron-Proximal4.1736821.06167HepG2PPIG
chr12890526228905287-intron-Distal4.57990400.00000K562SMNDC1
chr12890633428906350-intron-Distal,intron-Proximal3.02253400.00000HepG2NOLC1
chr12890526328905284-intron-Distal3.0981122.78397K562HNRNPUL1
chr12890631828906326-intron-Distal,intron-Proximal3.08199400.00000HepG2NOLC1
chr12890801628908052-intron-Distal3.703125.30777HepG2PPIG
chr12890631028906318-intron-Distal3.29393400.00000HepG2NOLC1
chr12890717628907222-intron-Distal,intron-Proximal4.756275.68078HepG2AQR
chr12890809828908160-intron-Distal4.664924.69889HepG2GRWD1
chr12890633628906346-intron-Distal,intron-Proximal7.07346400.00000HepG2DKC1
chr12890696728906971-intron-Distal4.75460400.00000HepG2DKC1
chr12890760328907679-intron-Distal,intron-Proximal4.392525.83855K562SRSF7
chr12890529228905333-intron-Distal4.6268210.36604K562ABCF1
chr12890636528906388-intron-Distal,intron-Proximal6.59529400.00000HepG2DKC1
chr12890695228906955-intron-Distal4.61148400.00000HepG2DKC1
chr12890528828905320-intron-Distal3.100356.76725K562SSB
chr12890514928905187-intron-Distal4.1744813.47664HepG2PPIG
chr12890755628907560-intron-Distal,intron-Proximal3.30584400.00000HepG2DKC1
chr12890527228905308-intron-Distal3.919866.34993K562ZC3H8
chr12890693228906937-intron-Distal,intron-Proximal4.36921400.00000HepG2DKC1
chr12890752328907527-intron-Distal,intron-Proximal3.49515400.00000HepG2DKC1
chr12890526328905287-intron-Distal3.2524915.29024K562PTBP1
chr12890604528906093-intron-Distal3.3025512.83091HepG2BUD13
chr12890601628906100-intron-Distal,intron-Proximal3.320647.15675HepG2AQR
chr12890527428905285-intron-Distal6.42913400.00000HepG2NOLC1
chr12890526228905318-intron-Distal3.1539117.18838K562DDX24
chr12890527228905317-intron-Distal3.5184834.41726HepG2LARP7
chr12890520428905244-intron-Distal4.769516.38747HepG2AQR
chr12890643028906465-intron-Distal,intron-Proximal3.9458614.72052K562PRPF8
chr12890774828907770-intron-Distal,intron-Proximal5.352165.70555K562PRPF8
chr12890640928906430-intron-Distal,intron-Proximal4.2534114.40077K562PRPF8
chr12890799728908072-intron-Distal3.7914511.86464K562BUD13
chr12890513728905204-intron-Distal3.068844.07145K562U2AF2
chr12890728828907327-intron-Distal4.0049711.10362K562HNRNPUL1
chr12890638328906409-intron-Distal,intron-Proximal3.906688.28777K562PRPF8
chr12890801028908062-intron-Distal3.849248.17399HepG2RBM22
chr12890617028906227-intron-Distal,intron-Proximal3.545423.52873K562SRSF1
chr12890734728907386-intron-Distal3.723143.54619K562ABCF1
chr12890707828907133-intron-Distal3.9126038.93282HepG2PPIG
chr12890528028905284-intron-Distal3.9301521.55703K562PHF6
chr12890732728907386-intron-Distal4.8327414.88625K562HNRNPUL1
chr12890774128907806-intron-Distal,intron-Proximal3.6256515.52740HepG2BUD13
chr12890641128906451-intron-Distal,intron-Proximal3.2865114.03000HepG2PPIG
chr12890517028905204-intron-Distal3.586355.99700HepG2AQR
chr12890528428905319-intron-Distal3.7612027.46597K562PHF6
chr12890529328905324-intron-Distal5.29522400.00000HepG2NOLC1
chr12890707728907176-intron-Distal,intron-Proximal3.8252313.47309HepG2AQR
chr12890513728905195-intron-Distal3.369286.45834HepG2LSM11
chr12890692728906930-intron-Distal,intron-Proximal4.19888400.00000HepG2DKC1
chr12890634628906349-intron-Distal,intron-Proximal6.99092400.00000HepG2DKC1
chr12890643028906457-intron-Distal,intron-Proximal5.6502224.55337HepG2PRPF8
chr12890633228906336-intron-Distal,intron-Proximal7.06442400.00000HepG2DKC1
chr12890802728908069-intron-Distal3.960846.10522K562GPKOW
chr12890799228908062-intron-Distal4.6772627.69512HepG2BUD13
chr12890611828906157-intron-Distal,intron-Proximal3.647914.77076HepG2LSM11
chr12890526328905314-intron-Distal3.7494175.37946K562SF3B4
chr12890692228906927-intron-Distal,intron-Proximal4.30610400.00000HepG2DKC1
chr12890756028907563-intron-Distal,intron-Proximal3.28609400.00000HepG2DKC1
chr12890528328905309-intron-Distal5.40848400.00000K562AATF
chr12890772728907803-intron-Distal,intron-Proximal4.3712711.57272HepG2AQR
chr12890806728908116-intron-Distal3.929368.70001HepG2PRPF8
chr12890634928906364-intron-Distal,intron-Proximal6.74352400.00000HepG2DKC1
chr12890596528906011-intron-Distal,intron-Proximal3.246544.26519K562PRPF8
chr12890800828908067-intron-Distal3.9349618.94746HepG2PRPF8
chr12890627328906312-intron-Distal6.84309400.00000HepG2DKC1
chr12890757428907622-intron-Distal,intron-Proximal4.8499916.12323HepG2PRPF8
chr12890637828906430-intron-Distal,intron-Proximal6.2769930.87787HepG2PRPF8
chr12890604228906085-intron-Distal,intron-Proximal4.3885217.42840HepG2PPIG
chr12890532428905331-intron-Distal3.9231170.27522HepG2NOLC1
chr12890698428907024-intron-Distal,intron-Proximal4.09590400.00000HepG2DKC1
chr12890818328908268-intron-Distal,intron-Proximal3.1617714.17413HepG2PPIG
chr12890801228908062-intron-Distal5.709729.96618HepG2AQR
chr12890689128906922-intron-Distal,intron-Proximal4.37038400.00000HepG2DKC1
chr12890798628908058-intron-Distal4.9619849.17026HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SNHG12 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SNHG12 is not available on ENCORE database.

  • 120 RBPs can affect the levels of SNHG12.  








The Knockdown/knockout RNA-Seq assay for SNHG12 is not available on ENCORE database.





120 RBPs can affect the gene expression of SNHG12 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SNHG12ENSG00000197989.9257.96250465.33420-0.851105.445504.17490HepG2ABCF1
SNHG12ENSG00000197989.9270.12690497.44270-0.880907.828306.91050HepG2ACO1
SNHG12ENSG00000197989.9161.79630366.91880-1.181308.525307.64670HepG2AKAP1
SNHG12ENSG00000197989.9367.13480529.88180-0.529403.160902.04970HepG2AKAP8
SNHG12ENSG00000197989.9310.46580499.87460-0.687104.892003.89640HepG2AKAP8L
SNHG12ENSG00000197989.9493.68380741.10630-0.586107.069506.05260HepG2AUH
SNHG12ENSG00000197989.9564.60970322.818700.806405.999804.59330HepG2BCCIP
SNHG12ENSG00000197989.9229.30750489.63170-1.094404.741503.45150HepG2CCAR1
SNHG12ENSG00000197989.9316.86340497.44860-0.650704.899304.06150HepG2CKAP4
SNHG12ENSG00000197989.9299.21890524.07130-0.808604.665903.66890HepG2CNOT7
SNHG12ENSG00000197989.9515.63030383.284200.427802.809901.69580HepG2CPSF7
SNHG12ENSG00000197989.9429.92110329.095500.385502.323301.39190HepG2YBX3
SNHG12ENSG00000197989.9114.73910199.43240-0.797503.536502.33460HepG2CSTF2
SNHG12ENSG00000197989.9518.97960735.45780-0.503003.703602.98150HepG2CELF1
SNHG12ENSG00000197989.9288.11930460.11560-0.675304.808303.74860HepG2DDX19B
SNHG12ENSG00000197989.9402.37030240.477000.742505.147003.30860HepG2DDX28
SNHG12ENSG00000197989.9241.88380351.47080-0.539102.654602.04070HepG2DDX3X
SNHG12ENSG00000197989.9395.35520532.38720-0.429302.608501.34670HepG2DDX47
SNHG12ENSG00000197989.9187.99160299.33780-0.671104.149002.51680HepG2DDX52
SNHG12ENSG00000197989.9540.58390317.387100.768205.439304.40040HepG2DDX55
SNHG12ENSG00000197989.9444.75550301.943300.558602.859702.23270HepG2DDX6
SNHG12ENSG00000197989.9188.82320475.94730-1.3338012.3476011.12910HepG2DKC1
SNHG12ENSG00000197989.9136.53080357.12240-1.3872012.2522010.51110HepG2EEF2
SNHG12ENSG00000197989.9168.74870297.69160-0.818905.157103.63950HepG2EFTUD2
SNHG12ENSG00000197989.9420.39210290.243000.534402.865802.26300HepG2EIF2S1
SNHG12ENSG00000197989.9278.72380403.14250-0.532502.829401.72430HepG2ESF1
SNHG12ENSG00000197989.9352.16060850.93530-1.2728027.6496026.08180HepG2ETF1
SNHG12ENSG00000197989.9319.11770486.19160-0.607402.680901.85890HepG2EWSR1
SNHG12ENSG00000197989.9291.41020469.89030-0.689303.584102.71610HepG2FIP1L1
SNHG12ENSG00000197989.9454.80420284.932100.674505.221404.15240HepG2FUBP3
SNHG12ENSG00000197989.9117.43020258.10520-1.136207.360805.92050HepG2GEMIN5
SNHG12ENSG00000197989.9170.63750258.06650-0.596802.502501.89060HepG2GPKOW
SNHG12ENSG00000197989.9197.62490326.23460-0.723104.304603.52300HepG2HNRNPA1
SNHG12ENSG00000197989.9963.70140726.802000.406904.219603.10570HepG2HNRNPA2B1
SNHG12ENSG00000197989.9272.95090362.87980-0.410901.892701.30800HepG2HNRNPC
SNHG12ENSG00000197989.9481.71500304.033700.663804.629703.74520HepG2HNRNPK
SNHG12ENSG00000197989.9267.53390360.48030-0.430202.673602.07750HepG2HNRNPU
SNHG12ENSG00000197989.9328.78470576.95690-0.811305.942904.15640HepG2HSPD1
SNHG12ENSG00000197989.9252.45130365.42470-0.533603.273102.49120HepG2IGF2BP1
SNHG12ENSG00000197989.9472.00400305.154400.629204.027603.22680HepG2IGF2BP2
SNHG12ENSG00000197989.9487.40900368.218000.404503.527002.70860HepG2ILF2
SNHG12ENSG00000197989.9343.97280499.43530-0.538002.981601.73650HepG2KHDRBS1
SNHG12ENSG00000197989.9684.36930306.944701.1567010.925508.86000HepG2KHSRP
SNHG12ENSG00000197989.9289.54770576.50340-0.993506.939104.98490HepG2KRR1
SNHG12ENSG00000197989.9291.77970414.47660-0.506402.859701.62650HepG2LIN28B
SNHG12ENSG00000197989.9222.39690334.26380-0.587903.147401.42350HepG2MARK2
SNHG12ENSG00000197989.9153.55260303.38580-0.982403.674602.46750HepG2METAP2
SNHG12ENSG00000197989.9446.16430319.376500.482203.228701.91480HepG2NAA15
SNHG12ENSG00000197989.9628.74230784.23120-0.318802.560401.82700HepG2NOL12
SNHG12ENSG00000197989.9689.64100479.022900.525702.326201.52580HepG2PABPC1
SNHG12ENSG00000197989.9802.89810296.745201.4359021.2208019.27030HepG2PABPC4
SNHG12ENSG00000197989.9432.94310321.518900.429202.959102.20010HepG2PPIL4
SNHG12ENSG00000197989.9236.89310335.31090-0.501303.203402.37680HepG2PRPF4
SNHG12ENSG00000197989.9153.81330244.89710-0.671002.736101.93180HepG2PRPF8
SNHG12ENSG00000197989.9332.75870748.59430-1.1697017.8716016.53740HepG2PUF60
SNHG12ENSG00000197989.9437.85600794.63890-0.8598017.3328016.11250HepG2PUM1
SNHG12ENSG00000197989.9180.46510506.69430-1.4894014.9031013.67420HepG2PUS1
SNHG12ENSG00000197989.9516.54880711.21490-0.461404.365203.75300HepG2RBM22
SNHG12ENSG00000197989.9704.80380313.403401.1691017.8663016.25030HepG2RBM25
SNHG12ENSG00000197989.9206.52410354.86190-0.780904.206203.56430HepG2NELFE
SNHG12ENSG00000197989.9223.70880399.73360-0.837406.541605.55430HepG2RPLP0
SNHG12ENSG00000197989.9143.57040282.09030-0.974406.974706.04960HepG2RPS19
SNHG12ENSG00000197989.9327.84040438.97920-0.421202.090101.38890HepG2RPS2
SNHG12ENSG00000197989.9363.52270526.31350-0.533902.771601.97190HepG2RPS3A
SNHG12ENSG00000197989.9145.16930242.25960-0.738802.998302.18400HepG2RRP9
SNHG12ENSG00000197989.9403.54570243.759000.727205.075304.14260HepG2SF3B1
SNHG12ENSG00000197989.9541.32630331.950300.705405.166804.40110HepG2SF3B4
SNHG12ENSG00000197989.9665.27870803.27400-0.271902.373701.89800HepG2SRFBP1
SNHG12ENSG00000197989.9219.39590346.50250-0.659304.520603.95290HepG2SRSF1
SNHG12ENSG00000197989.9458.29820739.09550-0.689509.684808.60780HepG2SRSF5
SNHG12ENSG00000197989.9695.43930281.913901.3026029.1205027.69480HepG2SRSF9
SNHG12ENSG00000197989.9257.78340697.40230-1.4358032.1143030.80240HepG2SSB
SNHG12ENSG00000197989.9419.45240840.58280-1.0029021.6975020.22260HepG2SUCLG1
SNHG12ENSG00000197989.9177.94810315.97090-0.828304.191003.38320HepG2SUPV3L1
SNHG12ENSG00000197989.9216.61850564.62660-1.382108.689106.91500HepG2TBRG4
SNHG12ENSG00000197989.9388.38390286.172900.440502.793701.95330HepG2TIA1
SNHG12ENSG00000197989.9184.97880350.25870-0.921107.999107.22900HepG2TIAL1
SNHG12ENSG00000197989.9446.32270186.665401.2575013.8386012.16910HepG2UCHL5
SNHG12ENSG00000197989.9529.16720289.377400.870705.954804.44270HepG2UPF2
SNHG12ENSG00000197989.9312.69240430.54410-0.461403.278102.14750HepG2UTP18
SNHG12ENSG00000197989.9671.60920471.424000.510502.769701.67170HepG2XPO5
SNHG12ENSG00000197989.9501.44160311.038200.688904.832703.88370HepG2XRN2
SNHG12ENSG00000197989.9854.55120596.329800.519006.570605.75040K562AGGF1
SNHG12ENSG00000197989.91004.52120620.517000.694908.514807.30650K562AKAP8L
SNHG12ENSG00000197989.91951.443001394.917800.484305.798203.90190K562APOBEC3C
SNHG12ENSG00000197989.93991.154501419.355301.491508.763707.81490K562AQR
SNHG12ENSG00000197989.9796.98150651.088300.291602.373701.53270K562ATP5C1
SNHG12ENSG00000197989.9784.43620995.22340-0.343403.083301.67860K562BCCIP
SNHG12ENSG00000197989.9552.38820712.61820-0.367402.517801.40430K562CCDC124
SNHG12ENSG00000197989.9642.47000796.95670-0.310902.185801.48110K562CPSF6
SNHG12ENSG00000197989.91716.316701109.522000.6293013.5335012.20130K562DDX47
SNHG12ENSG00000197989.9898.82980667.665500.428804.819503.61220K562DKC1
SNHG12ENSG00000197989.9618.39900382.982700.691206.204504.21230K562DNAJC21
SNHG12ENSG00000197989.9688.59010405.958400.762204.098101.91190K562DNAJC2
SNHG12ENSG00000197989.91336.24190604.882101.1434028.8921026.31490K562EIF3G
SNHG12ENSG00000197989.91840.06990599.903001.6169013.5507011.66900K562EIF4A3
SNHG12ENSG00000197989.92495.992601580.797000.6589016.3080014.15490K562EIF4G2
SNHG12ENSG00000197989.91034.56020623.873000.7296012.1065010.93400K562FXR1
SNHG12ENSG00000197989.9928.48640708.677500.389703.718602.40590K562GLRX3
SNHG12ENSG00000197989.9598.14600760.90250-0.347202.218301.50610K562GPKOW
SNHG12ENSG00000197989.91115.71270782.760600.511203.319302.14300K562HNRNPA1
SNHG12ENSG00000197989.91038.71020658.492800.657507.902106.33080K562KIF1C
SNHG12ENSG00000197989.91063.11660631.994500.7502010.549908.84310K562MAGOH
SNHG12ENSG00000197989.9947.93970737.682500.361703.058302.09320K562MBNL1
SNHG12ENSG00000197989.92215.672201685.028400.394903.274902.04130K562MSI2
SNHG12ENSG00000197989.91146.30050745.072600.621408.015506.70510K562MTPAP
SNHG12ENSG00000197989.91015.16520517.064700.973209.737507.69940K562NAA15
SNHG12ENSG00000197989.9362.83440599.04640-0.723407.513905.51560K562NCBP2
SNHG12ENSG00000197989.92405.057901728.994600.476005.853103.63230K562NOL12
SNHG12ENSG00000197989.9975.98380827.895000.237302.143801.47870K562NSUN2
SNHG12ENSG00000197989.9840.40390614.141400.452403.519701.83980K562NUSAP1
SNHG12ENSG00000197989.9833.83850562.362000.568205.156103.80900K562PCBP2
SNHG12ENSG00000197989.9445.65830814.94420-0.870809.027407.53010K562PCBP3
SNHG12ENSG00000197989.9389.99090625.10360-0.680706.783505.53990K562POLR2G
SNHG12ENSG00000197989.91421.25690780.541900.8645012.4043010.80790K562PRPF8
SNHG12ENSG00000197989.9957.19240614.004400.640508.064306.97160K562PTBP1
SNHG12ENSG00000197989.92135.556301724.814100.308103.000702.15020K562PUF60
SNHG12ENSG00000197989.92443.466201834.289600.413605.605704.04210K562PUM1
SNHG12ENSG00000197989.91656.54220615.319701.4287031.1760029.32950K562PUS1
SNHG12ENSG00000197989.9809.66780549.839800.558202.720001.32020K562RAVER1
SNHG12ENSG00000197989.9844.69770599.588500.494405.381304.57970K562RBM15
SNHG12ENSG00000197989.91716.97890588.886901.5437040.3724036.98860K562RBM22
SNHG12ENSG00000197989.9324.97330510.22560-0.650805.240403.87100K562RCC2
SNHG12ENSG00000197989.9277.05390619.67890-1.1614014.6958012.21850K562NELFE
SNHG12ENSG00000197989.9425.27720721.64220-0.762902.468801.52920K562RPS3
SNHG12ENSG00000197989.91444.59650816.843100.8224017.9849016.05360K562SF3A3
SNHG12ENSG00000197989.91076.91210599.207800.8457014.5069012.43740K562SF3B4
SNHG12ENSG00000197989.91264.76630654.354400.950603.779602.25940K562SNRNP200
SNHG12ENSG00000197989.9892.92020626.976300.510005.241104.10230K562SYNCRIP
SNHG12ENSG00000197989.91221.76260609.222001.0038015.5142013.57830K562TARDBP
SNHG12ENSG00000197989.9945.091701244.81890-0.397404.897303.19780K562TROVE2
SNHG12ENSG00000197989.9796.93090558.576700.512603.502202.23980K562U2AF1
SNHG12ENSG00000197989.91299.46330576.898301.1714027.5839025.09250K562U2AF2
SNHG12ENSG00000197989.91102.11690781.050400.496706.867205.58740K562WDR43
SNHG12ENSG00000197989.91034.03720459.242201.170908.085305.00090K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SNHG12 is not available on ENCORE database.





22 RBPs can affect the splicing of SNHG12 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESNHG12ENSG00000197989.9chr1-2890693628907180289064232890649328907622289077410.619000.003490.03463includedK562AQR
SESNHG12ENSG00000197989.9chr1-2890619428906226289059932890609928906453289065210.166000.000490.00664includedK562AQR
A3SSSNHG12ENSG00000197989.9chr1-2890505228905288289050522890519228906044289061410.053000.000010.00012longerK562AQR
A3SSSNHG12ENSG00000197989.9chr1-2890707128907257289070712890715828907622289077410.189000.000000.00000longerK562AQR
A3SSSNHG12ENSG00000197989.9chr1-2890760528907822289076052890774128908101289083300.128000.000000.00001longerK562AQR
A3SSSNHG12ENSG00000197989.9chr1-289070712890729828907071289071802890762228907741-0.439000.000000.00000shorterK562AQR
A3SSSNHG12ENSG00000197989.9chr1-2890707128907180289070712890715828907622289077410.215000.000000.00000longerK562PUS1
A3SSSNHG12ENSG00000197989.9chr1-2890707128907180289070712890715828907622289077410.149000.000180.02484longerK562RBM15
A5SSSNHG12ENSG00000197989.9chr1-289076052890774128907622289077412890707128907158-0.078000.000680.02818shorterK562PUS1
A5SSSNHG12ENSG00000197989.9chr1-289064232890649328906453289064932890604428906099-0.262000.003270.09931shorterK562PUS1
A5SSSNHG12ENSG00000197989.9chr1-289076052890774128907622289077412890707128907158-0.146000.000010.00053shorterHepG2U2AF2
A5SSSNHG12ENSG00000197989.9chr1-289064232890649328906453289064932890604428906099-0.388000.001010.05445shorterK562SRSF1
RISNHG12ENSG00000197989.9chr1-2890604428907158289060442890649328907071289071580.125000.000120.00309includedK562SF3B4
RISNHG12ENSG00000197989.9chr1-2890604428907158289060442890649328907071289071580.285000.000000.00000includedK562PUS1
RISNHG12ENSG00000197989.9chr1-2890604428906493289060442890609928906423289064930.269000.001010.00750includedK562PUS1
RISNHG12ENSG00000197989.9chr1-289060442890649328906044289060992890642328906493-0.220000.000190.00742excludedK562HNRNPC
RISNHG12ENSG00000197989.9chr1-2890604428907158289060442890649328907071289071580.238000.000000.00083includedHepG2SUPV3L1
RISNHG12ENSG00000197989.9chr1-289060442890649328906044289060992890642328906493-0.241000.000740.03221excludedK562HNRNPUL1
RISNHG12ENSG00000197989.9chr1-2890604428907158289060442890649328907071289071580.186000.000450.00700includedK562AGGF1
RISNHG12ENSG00000197989.9chr1-2890604428907158289060442890649328907071289071580.088000.000780.01188includedK562PRPF8
RISNHG12ENSG00000197989.9chr1-2890604428906493289060442890609928906423289064930.340000.000010.00044includedHepG2PCBP1
RISNHG12ENSG00000197989.9chr1-2890604428906493289060442890609928906423289064930.347000.000790.02084includedHepG2SRSF1
RISNHG12ENSG00000197989.9chr1-2890604428906493289060442890609928906423289064930.335000.000410.00624includedHepG2QKI
RISNHG12ENSG00000197989.9chr1-2890604428907158289060442890649328907071289071580.098000.000560.04905includedK562XRN2
RISNHG12ENSG00000197989.9chr1-2890604428907158289060442890649328907071289071580.070000.003230.05943includedK562RBM22
RISNHG12ENSG00000197989.9chr1-2890604428906493289060442890609928906423289064930.125000.005920.09153includedK562RBM22
RISNHG12ENSG00000197989.9chr1-2890604428907158289060442890649328907071289071580.198000.000000.00002includedK562AKAP8L
RISNHG12ENSG00000197989.9chr1-2890604428906493289060442890609928906423289064930.271000.001020.01207includedHepG2TAF15
RISNHG12ENSG00000197989.9chr1-289060442890715828906044289060992890713328907158-0.075000.002160.07316excludedK562SUPV3L1
RISNHG12ENSG00000197989.9chr1-2890604428907158289060442890649328907071289071580.214000.000040.00072includedK562RBM15
RISNHG12ENSG00000197989.9chr1-2890604428907158289060442890649328907071289071580.083000.006280.06812includedK562U2AF2
RISNHG12ENSG00000197989.9chr1-2890604428906493289060442890609928906423289064930.394000.002870.04632includedHepG2TIAL1
RISNHG12ENSG00000197989.9chr1-2890604428907158289060442890649328907071289071580.205000.000290.06341includedHepG2FUS
RISNHG12ENSG00000197989.9chr1-2890604428906493289060442890609928906423289064930.202000.008370.05361includedHepG2SF3B4
RISNHG12ENSG00000197989.9chr1-2890604428907158289060442890649328907071289071580.129000.003650.05385includedHepG2FUBP3
RISNHG12ENSG00000197989.9chr1-2890604428907158289060442890649328907071289071580.129000.002650.04044includedHepG2SRSF9
RISNHG12ENSG00000197989.9chr1-2890604428906493289060442890609928906423289064930.298000.000060.00222includedHepG2SRSF9
RISNHG12ENSG00000197989.9chr1-2890604428907158289060442890649328907071289071580.141000.000250.00446includedK562UTP18
RISNHG12ENSG00000197989.9chr1-2890604428907158289060442890649328907071289071580.165000.000000.00000includedK562AQR
RISNHG12ENSG00000197989.9chr1-289060442890622628906044289060992890619428906226-0.138000.000000.00001excludedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906423289065212890710228907180289060402890609928907622289077410.362000.000000.000001includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906423289065212890707128907180289060402890609928907622289077410.374000.000000.000001includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906423289065212890693628907180289060402890609928907622289077410.369000.000000.000001includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906453289065212890762228907822289059932890609928908101289083300.102000.008670.056431includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906453289065212890762228907780289059932890609928908101289083300.092000.008380.054891includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906453289065212890707128907180289059932890609928907622289077410.489000.000000.000001includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906453289065212890707128907257289059932890609928907622289077410.099000.004500.032831includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906453289065212890710228907180289059932890609928907622289077410.462000.000000.000001includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906453289065212890693628907180289059932890609928907622289077410.473000.000000.000001includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906453289065212890707128907270289059932890609928907622289077410.106000.002240.018361includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906453289065212890707128907243289059932890609928907622289077410.091000.009140.058881includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906453289065212890707128907298289059932890609928907622289077410.085000.009000.058141includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906453289065212890707128907264289059932890609928907622289077410.096000.009360.060001includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906453289064932890762228907822289060442890609928908101289083300.225000.003730.028111includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906453289064932890762228907780289060442890609928908101289083300.207000.003720.028041includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906453289064932890693628907180289060442890609928907622289077410.671000.000000.000001includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906453289064932890707128907180289060442890609928907622289077410.676000.000000.000001includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906453289064932890710228907180289060402890609928907622289077410.664000.000000.000001includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906453289065262890762228907822289060442890609928908101289083300.235000.010080.063761includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906453289065262890762228907780289060442890609928908101289083300.217000.010430.065521includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906423289064932890710228907180289060402890609928907622289077410.332000.000000.000001includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906423289064932890707128907180289060402890609928907622289077410.344000.000000.000001includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906423289064932890693628907180289060402890609928907622289077410.339000.000000.000001includedK562AQR
MXESNHG12ENSG00000197989.9chr1-2890604428906099289064232890649328905049289051922890707128907158-0.100000.001550.013372includedK562AQR
MXESNHG12ENSG00000197989.9chr1-2890642328906521289070712890715828906044289060992890762228907741-0.093000.009620.061352includedK562AQR
MXESNHG12ENSG00000197989.9chr1-2890604428906120289064232890649328905049289051922890707128907522-0.091000.003690.027902includedK562AQR
MXESNHG12ENSG00000197989.9chr1-2890642328906493289070712890715828906044289060992890762228907741-0.094000.015600.090402includedK562AQR
MXESNHG12ENSG00000197989.9chr1-28906423289064932890713328907180289060442890609928907622289077410.202000.005920.090601includedK562SUPV3L1
MXESNHG12ENSG00000197989.9chr1-28906423289064932890713328907158289060442890609928907622289077410.275000.003690.065431includedK562SUPV3L1
MXESNHG12ENSG00000197989.9chr1-28906423289064932890713328907158289060442890609928908101289083650.237000.005470.085921includedK562SUPV3L1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SNHG12 is not avaliable on ENCORE database.