PHF15

General Information

Gene Name       : PHF15
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PHF15)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PHF15 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PHF15 RNA is bound by 8 proteins.  







eCLIP assay for PHF15 is not avaliable on ENCORE database.





8 proteins are bound to PHF15 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5133909437133909546+CDS,intron-Distal,intron-Proximal3.664374.54206HepG2PRPF8
chr5133892736133892800+intron-Distal5.413386.68220HepG2AGGF1
chr5133891568133891630+intron-Distal4.7926010.10490K562AGGF1
chr5133891949133892035+intron-Distal6.8854424.07064K562AGGF1
chr5133892691133892800+intron-Distal5.7019010.00393HepG2HNRNPL
chr5133892716133892872+intron-Distal5.130535.80475HepG2XPO5
chr5133891473133891568+intron-Distal6.0824310.16517K562AGGF1
chr5133891669133891720+intron-Distal4.7329511.44087K562AGGF1
chr5133862896133862953+intron-Distal3.277283.04847HepG2CSTF2T
chr5133891470133891559+intron-Distal4.564106.09580K562HNRNPL
chr5133891815133891851+intron-Distal4.237873.80418HepG2AGGF1
chr5133892805133892882+intron-Distal4.788626.94016HepG2AGGF1
chr5133891955133892070+intron-Distal4.4614113.12636HepG2AGGF1
chr5133891945133892036+intron-Distal5.457168.00948HepG2HNRNPL
chr5133892806133892889+intron-Distal7.0890327.34248K562AGGF1
chr5133891722133891777+intron-Distal4.662967.03988K562HNRNPL
chr5133892705133892852+intron-Distal3.956893.30705HepG2GTF2F1
chr5133891728133891782+intron-Distal5.017427.65506HepG2AGGF1
chr5133892815133892885+intron-Distal4.575446.31458HepG2HNRNPL
chr5133892703133892806+intron-Distal7.3014630.15131K562AGGF1
chr5133862018133862100+intron-Distal,intron-Proximal4.156453.18217HepG2NKRF
chr5133891959133892037+intron-Distal4.998388.84337K562HNRNPL
chr5133892811133892887+intron-Distal4.353125.31654K562HNRNPL
chr5133892979133893012+intron-Distal5.234865.63362K562AGGF1
chr5133891500133891600+intron-Distal3.728383.30889K562GTF2F1
chr5133892728133892811+intron-Distal4.262594.94713K562HNRNPL
chr5133892698133892796+intron-Distal4.907594.27047K562AKAP8L
chr5133862705133862763+intron-Distal4.617606.32277HepG2CSTF2T
chr5133891672133891784+intron-Distal5.3256510.45359HepG2HNRNPL
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PHF15 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PHF15 is not available on ENCORE database.

  • 107 RBPs can affect the levels of PHF15.  








The Knockdown/knockout RNA-Seq assay for PHF15 is not available on ENCORE database.





107 RBPs can affect the gene expression of PHF15 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PHF15ENSG00000043143.16675.08510426.855500.661204.744003.54000HepG2ABCF1
PHF15ENSG00000043143.16565.36760326.102500.7938010.758709.72350HepG2ACO1
PHF15ENSG00000043143.16906.15230293.415901.6267022.8576021.49300HepG2AKAP1
PHF15ENSG00000043143.16478.71420347.939500.460202.333401.37260HepG2AKAP8
PHF15ENSG00000043143.16506.07020327.605200.627306.329305.21430HepG2AKAP8L
PHF15ENSG00000043143.16467.64890242.755500.945807.861706.57110HepG2ASCC1
PHF15ENSG00000043143.16184.38890257.08930-0.479502.058101.38650HepG2CALR
PHF15ENSG00000043143.16458.78570230.641400.992108.550207.25050HepG2CIRBP
PHF15ENSG00000043143.16669.96180325.996301.0391019.7418018.32460HepG2CKAP4
PHF15ENSG00000043143.16439.89890279.212200.655703.054202.24700HepG2CNOT7
PHF15ENSG00000043143.16211.42740406.08300-0.941607.524206.43590HepG2CPSF6
PHF15ENSG00000043143.16547.42070316.192800.791709.889008.81620HepG2CELF1
PHF15ENSG00000043143.16248.34940339.93720-0.452902.834102.08440HepG2DAZAP1
PHF15ENSG00000043143.16420.56250301.581800.479704.093603.10230HepG2DDX19B
PHF15ENSG00000043143.16340.53440245.796200.470202.708301.56100HepG2DDX1
PHF15ENSG00000043143.16706.69020281.024001.3303016.6660015.26700HepG2DDX3X
PHF15ENSG00000043143.16387.05120241.514300.680303.115702.46360HepG2DDX6
PHF15ENSG00000043143.16355.15890232.065500.613803.253302.61310HepG2EIF2S1
PHF15ENSG00000043143.16482.81490323.832800.576104.348102.89160HepG2EIF2S2
PHF15ENSG00000043143.16564.98910212.746801.4090016.3440014.38050HepG2EIF3D
PHF15ENSG00000043143.16838.80350249.748401.7478022.0335020.23670HepG2EIF4B
PHF15ENSG00000043143.161063.17220698.721000.605508.963207.98560HepG2ETF1
PHF15ENSG00000043143.16706.65770431.028900.713105.431504.38420HepG2FIP1L1
PHF15ENSG00000043143.16720.25820258.862501.4762020.8699019.15520HepG2FXR1
PHF15ENSG00000043143.16754.35660240.049701.6518024.3592022.47040HepG2G3BP1
PHF15ENSG00000043143.16392.19040254.952300.621203.602502.57980HepG2G3BP2
PHF15ENSG00000043143.16268.62840189.418900.503902.181701.39270HepG2GEMIN5
PHF15ENSG00000043143.16483.02590247.379500.965308.238606.47920HepG2GNB2L1
PHF15ENSG00000043143.16288.90910460.32690-0.672004.137203.36650HepG2GPKOW
PHF15ENSG00000043143.16415.71820311.313100.417103.020002.00280HepG2HDGF
PHF15ENSG00000043143.16366.94850243.316500.592603.493302.77780HepG2HNRNPA1
PHF15ENSG00000043143.16354.91490230.624500.621803.244701.72620HepG2HNRNPAB
PHF15ENSG00000043143.16612.65150243.266301.3324016.8386015.26520HepG2HNRNPK
PHF15ENSG00000043143.16477.30120309.642400.624204.564503.71690HepG2HNRNPL
PHF15ENSG00000043143.16410.35700297.411400.464302.781401.82970HepG2HNRNPM
PHF15ENSG00000043143.16595.48000243.975701.2872015.1302013.69860HepG2IGF2BP2
PHF15ENSG00000043143.16616.21520229.079901.427504.354003.12640HepG2IGF2BP3
PHF15ENSG00000043143.16470.21620245.453200.937806.477904.87480HepG2KHSRP
PHF15ENSG00000043143.16402.67520298.076600.433803.228802.12930HepG2KIF1C
PHF15ENSG00000043143.16348.17260242.398500.522302.679901.56460HepG2LARP7
PHF15ENSG00000043143.16508.45680258.953600.973308.396507.26790HepG2MAGOH
PHF15ENSG00000043143.16386.84770260.377200.571102.769302.13780HepG2MATR3
PHF15ENSG00000043143.16777.69430266.489601.5450013.7707012.42440HepG2NCBP2
PHF15ENSG00000043143.16540.03170337.083600.679807.100605.88770HepG2NOL12
PHF15ENSG00000043143.16570.75460280.433901.025105.551203.97390HepG2NONO
PHF15ENSG00000043143.16232.69650389.52190-0.743304.754903.78410HepG2NSUN2
PHF15ENSG00000043143.16426.58000237.230300.846406.296705.21860HepG2PABPC4
PHF15ENSG00000043143.16443.96150258.809600.778408.344007.38360HepG2PCBP1
PHF15ENSG00000043143.16323.62790239.807700.432402.487501.78460HepG2PPIL4
PHF15ENSG00000043143.16562.07890263.369401.0936016.3553015.23910HepG2PTBP1
PHF15ENSG00000043143.16999.58420341.608701.5489055.2536053.30830HepG2PUM1
PHF15ENSG00000043143.16442.36870341.349600.373902.269001.65950HepG2PUM2
PHF15ENSG00000043143.16568.37540332.151300.7749010.305509.24580HepG2PUS1
PHF15ENSG00000043143.16371.03220285.190800.379502.031001.48350HepG2QKI
PHF15ENSG00000043143.16317.85340417.65180-0.393902.362401.56320HepG2RBM15
PHF15ENSG00000043143.161149.47000584.002200.9768020.5823019.43700HepG2RBM22
PHF15ENSG00000043143.16506.58780258.845900.9686010.641009.37800HepG2RBM25
PHF15ENSG00000043143.16491.46640292.300100.749505.152403.78100HepG2RBM27
PHF15ENSG00000043143.16501.69520293.087400.775408.126207.28580HepG2NELFE
PHF15ENSG00000043143.16449.34500273.002800.718806.897605.98830HepG2RECQL
PHF15ENSG00000043143.16420.98180249.184100.756402.646301.71980HepG2RPS10
PHF15ENSG00000043143.16436.06120207.028201.0746010.784609.66670HepG2RPS19
PHF15ENSG00000043143.16419.83690280.446000.582002.908602.08900HepG2RPS3A
PHF15ENSG00000043143.16394.04840275.181500.517902.575501.54120HepG2RPS5
PHF15ENSG00000043143.16887.15100445.058400.995109.306008.01030HepG2SF3A3
PHF15ENSG00000043143.16264.30890434.81880-0.718205.146804.20670HepG2SF3B1
PHF15ENSG00000043143.16448.85810274.163900.711106.654205.80000HepG2SF3B4
PHF15ENSG00000043143.16657.24660241.402601.444904.951802.93690HepG2SFPQ
PHF15ENSG00000043143.16564.88420279.201501.0165016.6976015.32050HepG2SMN1
PHF15ENSG00000043143.16802.36860659.610200.282602.408801.93020HepG2SRFBP1
PHF15ENSG00000043143.16639.45770317.738301.0089016.9635015.60010HepG2SRSF5
PHF15ENSG00000043143.16402.28780232.838500.788808.408207.53810HepG2SRSF9
PHF15ENSG00000043143.16456.99060572.70010-0.325602.374401.89170HepG2SSB
PHF15ENSG00000043143.16735.86130377.480400.962909.706907.52880HepG2SSRP1
PHF15ENSG00000043143.16406.96510243.982700.738004.646503.18420HepG2STIP1
PHF15ENSG00000043143.16587.39900361.340100.700904.581803.81800HepG2SUCLG1
PHF15ENSG00000043143.16305.51470428.17930-0.487002.731402.01090HepG2TARDBP
PHF15ENSG00000043143.16315.93960203.680800.633202.860901.84900HepG2TFIP11
PHF15ENSG00000043143.16378.12990261.197900.533603.502802.95380HepG2TIAL1
PHF15ENSG00000043143.16570.71670314.399500.860109.145107.37980HepG2TUFM
PHF15ENSG00000043143.161149.01340368.735201.6396032.5831030.35850HepG2U2AF1
PHF15ENSG00000043143.16639.93120258.320301.308704.390903.13640HepG2U2AF2
PHF15ENSG00000043143.16495.17770394.699200.327102.271701.62880HepG2UPF1
PHF15ENSG00000043143.16185.26400278.21650-0.586602.429601.49300HepG2UPF2
PHF15ENSG00000043143.16505.40070381.066000.407302.184001.63840HepG2UTP3
PHF15ENSG00000043143.16840.11340351.927301.2552017.8551016.53220K562AQR
PHF15ENSG00000043143.16504.37550350.495900.525003.847002.53540K562CPEB4
PHF15ENSG00000043143.16539.30830396.867600.442403.432502.08230K562DDX21
PHF15ENSG00000043143.16583.22490362.763200.684907.781306.76460K562DDX47
PHF15ENSG00000043143.16299.01300173.080100.788705.121103.28180K562DNAJC21
PHF15ENSG00000043143.16768.26760359.203501.0967019.9090018.24150K562EIF2S2
PHF15ENSG00000043143.16294.29850163.717800.846003.655302.48220K562EIF3A
PHF15ENSG00000043143.16518.40960195.156201.4094014.6713012.12550K562EIF3D
PHF15ENSG00000043143.16221.94210119.181800.896905.529204.41910K562EIF3G
PHF15ENSG00000043143.16368.79810188.686100.966708.449507.01390K562EIF4A3
PHF15ENSG00000043143.16242.40260169.919100.512502.666901.54070K562EIF4B
PHF15ENSG00000043143.16958.65520461.450501.0547014.6729012.61910K562EIF4G2
PHF15ENSG00000043143.16351.48130235.505200.577603.113202.20050K562FMR1
PHF15ENSG00000043143.16288.81530199.612500.532802.391101.54620K562FTO
PHF15ENSG00000043143.16442.33660196.225101.1725014.6627013.38170K562FXR1
PHF15ENSG00000043143.16504.57730327.815800.622105.130703.63980K562HNRNPL
PHF15ENSG00000043143.16293.39270127.903801.1977010.848909.11610K562MAGOH
PHF15ENSG00000043143.16198.74970127.628800.638903.092702.11420K562MATR3
PHF15ENSG00000043143.16318.92130179.723900.827304.975303.10370K562NONO
PHF15ENSG00000043143.16518.19480399.050600.376802.876802.11790K562NSUN2
PHF15ENSG00000043143.16546.52150290.054100.913905.578203.80830K562PABPC1
PHF15ENSG00000043143.16639.70550474.141700.432003.760202.09420K562PNPT1
PHF15ENSG00000043143.16254.33240177.405500.519602.006901.36230K562PRPF8
PHF15ENSG00000043143.16214.21770124.274200.785504.572803.73960K562PTBP1
PHF15ENSG00000043143.16732.01250503.506700.539804.941003.85380K562PUF60
PHF15ENSG00000043143.16685.74950535.350500.357102.718801.66220K562PUM1
PHF15ENSG00000043143.16828.83860524.749600.659404.050702.88370K562PUM2
PHF15ENSG00000043143.16253.33380119.108401.088708.116906.57520K562RBM22
PHF15ENSG00000043143.16380.27400180.679801.073507.604406.23610K562RPS19
PHF15ENSG00000043143.16371.31750256.224300.535103.146101.99060K562SAFB
PHF15ENSG00000043143.16290.46080177.188100.713003.946801.94990K562SRP68
PHF15ENSG00000043143.16241.07060121.841600.984306.319705.26220K562SRSF1
PHF15ENSG00000043143.16251.23340158.801300.661703.137902.00030K562SRSF4
PHF15ENSG00000043143.16262.62510123.287001.090907.876106.60560K562TARDBP
PHF15ENSG00000043143.16215.49270118.930700.857404.265703.21710K562TIA1
PHF15ENSG00000043143.16184.46610116.764800.659702.806801.70360K562TRA2A
PHF15ENSG00000043143.16610.27030423.118200.528304.905503.97940K562UPF1
PHF15ENSG00000043143.16316.02220185.128100.771404.658802.93440K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PHF15 is not available on ENCORE database.





1 RBPs can affect the splicing of PHF15 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPHF15ENSG00000043143.16chr5+133912457133912586133909334133909452133914183133915164-0.446000.000270.04626excludedHepG2HNRNPA1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PHF15 is not avaliable on ENCORE database.