PAPOLA

General Information

Gene Name       : PAPOLA
Gene ID             : ENSG00000090060.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PAPOLA)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PAPOLAENSG00000090060.1794.6586.7190.68ENCSR000AEF
HepG2PAPOLAENSG00000090060.1770.98120.9695.97ENCSR985KAT
K562PAPOLAENSG00000090060.1780.4996.1388.31ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PAPOLA is not avaliable on ENCORE database.



Proteins bound to RNA
  • PAPOLA RNA is bound by 33 proteins.  







eCLIP assay for PAPOLA is not avaliable on ENCORE database.





33 proteins are bound to PAPOLA RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr149700115497001218+3'-UTR,intron-Distal4.441195.75173HepG2QKI
chr149699432196994344+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.0772414.52112HepG2BCLAF1
chr149702259197022655+3'-UTR,CDS4.120795.35244HepG2IGF2BP1
chr149699164596991673+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.526887.74581HepG2BCLAF1
chr149702918297029232+3'-UTR,CDS,intron-Distal,intron-Proximal3.120623.90824K562YBX3
chr149703130697031377+3'-UTR,CDS4.4199915.72841K562IGF2BP1
chr149702217797022238+3'-UTR,CDS,intron-Proximal3.641145.87745K562BUD13
chr149702255197022591+3'-UTR,CDS3.600743.38325HepG2IGF2BP1
chr149699426796994313+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.292564.38107K562AQR
chr149699426696994370+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.931786.03362HepG2AQR
chr149699903696999145+3'-UTR,intron-Distal,intron-Proximal3.726909.93640HepG2CSTF2
chr149703162697031665+3'-UTR4.155634.65489K562IGF2BP1
chr149702218297022270+3'-UTR,CDS,intron-Proximal3.679928.07578K562YBX3
chr149699863896998697+3'-UTR,5'-UTR,CDS,intron-Proximal3.5445413.24176HepG2U2AF2
chr149701048397010541+3'-UTR,CDS,intron-Proximal3.107784.51003HepG2PPIG
chr149703335297033418+3'-UTR3.559035.45588K562PUM2
chr149699428696994306+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.393148.47761HepG2BCLAF1
chr149699904496999106+3'-UTR,intron-Distal,intron-Proximal3.195126.98577K562CSTF2T
chr149699430696994321+3'-UTR,5'-UTR,CDS,intron-Distal4.2726710.24470HepG2BCLAF1
chr149699792196997992+3'-UTR,5'-UTR,CDS,intron-Proximal3.519638.18888K562AQR
chr149703138097031442+3'-UTR,CDS4.752204.84422HepG2IGF2BP1
chr149703138097031464+3'-UTR,CDS4.038643.63655K562IGF2BP2
chr149701418697014254+3'-UTR,CDS,intron-Distal3.370123.47312HepG2FXR2
chr149699781196997845+3'-UTR,5'-UTR,CDS,intron-Proximal3.7540715.59767HepG2BCLAF1
chr149699167396991730+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.9070517.91382HepG2BCLAF1
chr149700919297009218+3'-UTR,CDS3.591766.16886K562YBX3
chr149702268897022753+3'-UTR,CDS,intron-Proximal3.059906.04751HepG2GRWD1
chr149699784596997892+3'-UTR,5'-UTR,CDS3.9993214.94623HepG2BCLAF1
chr149701892997018960+3'-UTR,CDS,intron-Proximal3.020766.42940HepG2GRWD1
chr149703327297033304+3'-UTR3.882918.26247K562IGF2BP1
chr149703330497033320+3'-UTR3.621217.40851K562IGF2BP1
chr149701055797010596+3'-UTR,CDS,intron-Proximal4.051513.97054K562IGF2BP1
chr149699431996994382+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.344675.34978HepG2PRPF8
chr149701420397014257+3'-UTR,CDS,intron-Distal,intron-Proximal3.500896.50801HepG2BCLAF1
chr149701881497018879+3'-UTR,CDS,intron-Proximal3.281587.65028K562YBX3
chr149702909797029270+3'-UTR,CDS,intron-Distal,intron-Proximal3.697547.50982HepG2AQR
chr149702919697029231+3'-UTR,CDS,intron-Distal,intron-Proximal3.127823.60157HepG2GRWD1
chr149702217697022230+3'-UTR,CDS,intron-Proximal3.715596.46304K562SF3B4
chr149702911597029197+3'-UTR,CDS,intron-Distal,intron-Proximal3.3812812.44661HepG2U2AF2
chr149700047297000548+3'-UTR,intron-Distal3.273976.53488K562LIN28B
chr149702698697027048+3'-UTR,CDS,intron-Distal4.029966.81385HepG2BCLAF1
chr149701416597014203+3'-UTR,CDS,intron-Distal3.215075.40132HepG2BCLAF1
chr149700911397009165+3'-UTR,CDS3.076283.17744HepG2GRWD1
chr149703272597032751+3'-UTR4.231488.32481K562IGF2BP1
chr149700337097003443+3'-UTR,CDS,intron-Proximal3.388333.43910HepG2PRPF8
chr149700082597000864+3'-UTR,CDS,intron-Proximal3.5939214.38705K562PUM2
chr149703270597032725+3'-UTR4.7883115.33556K562IGF2BP1
chr149701413297014177+3'-UTR,CDS,intron-Distal,intron-Proximal4.290534.50986K562IGF2BP1
chr149699789296997937+3'-UTR,5'-UTR,CDS,intron-Proximal3.2063710.49889HepG2BCLAF1
chr149701892897018960+3'-UTR,CDS,intron-Proximal4.4250517.09796K562YBX3
chr149700091397000947+3'-UTR,CDS,intron-Proximal5.160716.30839HepG2TIAL1
chr149701049097010542+3'-UTR,CDS3.469147.58656HepG2BCLAF1
chr149702258797022675+3'-UTR,CDS3.318028.76917K562IGF2BP1
chr149699791396997964+3'-UTR,5'-UTR,CDS,intron-Proximal5.624215.01842HepG2PRPF8
chr149701054297010595+3'-UTR,CDS4.9240911.47391HepG2BCLAF1
chr149701889497018966+3'-UTR,CDS,intron-Proximal3.516409.30684HepG2BCLAF1
chr149701890897019021+3'-UTR,CDS,intron-Proximal3.069306.15266HepG2PRPF8
chr149700111897001222+3'-UTR,intron-Distal5.1457723.73560K562QKI
chr149699376896993829+3'-UTR,5'-UTR,CDS,intron-Distal4.393913.15232HepG2LIN28B
chr149701887997018928+3'-UTR,CDS4.9915318.86854K562YBX3
chr149703140597031461+3'-UTR4.101277.73013K562IGF2BP1
chr149699381396993878+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.155579.90630HepG2BCLAF1
chr149699899296999011+3'-UTR,CDS,intron-Proximal3.601895.32508K562PUM2
chr149703232497032391+3'-UTR3.161297.79660K562YBX3
chr149699424196994314+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.1360610.09468K562SF3B4
chr149702912197029180+3'-UTR,CDS,intron-Distal,intron-Proximal3.568283.02321K562U2AF2
chr149701417897014238+3'-UTR,CDS,intron-Distal4.300105.82129K562PUM2
chr149703268597032705+3'-UTR4.0437511.65697K562IGF2BP1
chr149703140297031479+3'-UTR3.160224.14618K562ZNF622
chr149696876896968865+5'-UTR,CDS,intron-Distal3.062956.46183K562UCHL5
chr149696879596968850+5'-UTR,CDS,intron-Distal3.850484.75609K562NCBP2
chr149699881996998878+5'-UTR,CDS,intron-Proximal4.5117931.92863HepG2U2AF2
chr149699878396998877+5'-UTR,CDS,intron-Proximal3.5593210.24099K562SF3B4
chr149699882096998879+5'-UTR,CDS,intron-Proximal4.1636917.36007K562U2AF2
chr149699896196998992+5'-UTR,CDS,intron-Proximal4.6376550.90518K562PUM2
chr149696887596968939+5'-UTR,CDS,intron-Distal,intron-Proximal3.644586.62505K562UCHL5
chr149698653096986565+5'-UTR,CDS,intron-Distal4.277727.09561HepG2BCLAF1
chr149699882996998917+5'-UTR,CDS,intron-Proximal3.3904510.81152K562U2AF1
chr149696885596968939+5'-UTR,CDS,intron-Distal,intron-Proximal3.7307525.17747HepG2DDX3X
chr149696879596968855+5'-UTR,CDS,intron-Distal3.6324916.12135HepG2DDX3X
chr149699877096998861+5'-UTR,CDS,intron-Proximal4.330744.23960HepG2TIAL1
chr149698734296987410+5'-UTR,CDS,intron-Distal,intron-Proximal4.6790125.03380HepG2BCLAF1
chr149696888096968939+5'-UTR,CDS,intron-Distal,intron-Proximal3.980744.66021K562GEMIN5
chr149699886796998960+5'-UTR,CDS3.051854.29277HepG2GRWD1
chr149699870896998757+5'-UTR,CDS3.3955911.17783HepG2BCLAF1
chr149697904496979133+intron-Distal3.148103.46531K562KHSRP
chr149696895796969026+intron-Distal,intron-Proximal3.777294.97100HepG2TIAL1
chr149699178496991868+intron-Distal,intron-Proximal4.500815.32062K562EFTUD2
chr149702231397022406+intron-Distal,intron-Proximal4.246654.76003K562KHSRP
chr149697941296979468+intron-Distal3.135505.17888HepG2HNRNPC
chr149696898396969024+intron-Distal,intron-Proximal4.491453.75440HepG2XRN2
chr149697852396978582+intron-Distal4.289343.89294K562KHSRP
chr149701258697012648+intron-Distal3.225243.35050HepG2SUGP2
chr149699179096991856+intron-Distal,intron-Proximal4.064383.49003K562PRPF8
chr149699175296991862+intron-Distal,intron-Proximal3.859443.19904K562TIA1
chr149697110496971165+intron-Distal,intron-Proximal4.958166.07567K562KHSRP
chr149700651897006585+intron-Distal3.484323.90146K562KHSRP
chr149700843097008493+intron-Distal,intron-Proximal4.502264.00239HepG2KHSRP
chr149701917097019272+intron-Distal3.149693.49653K562PRPF8
chr149698267296982763+intron-Distal3.855754.78196HepG2PTBP1
chr149699080696990908+intron-Distal5.7586812.91829HepG2PCBP2
chr149702070597020852+intron-Distal3.151575.19836HepG2U2AF2
chr149700841297008502+intron-Distal,intron-Proximal5.070026.51328K562KHSRP
chr149702339597023449+intron-Distal3.625028.10900HepG2HNRNPC
chr149696943696969472+intron-Distal3.818213.21228K562TIA1
chr149698267496982770+intron-Distal4.364128.82626HepG2PCBP2
chr149702925197029277+intron-Distal,intron-Proximal4.792564.48002K562AQR
chr149696895996969028+intron-Distal,intron-Proximal4.109976.39201HepG2RBM22
chr149701858897018665+intron-Distal4.520054.45977HepG2U2AF2
chr149700234797002420+intron-Proximal4.613544.98572HepG2TIAL1
chr149700325397003310+intron-Proximal4.019435.63851K562SF3B4
chr149700339797003470+intron-Proximal5.038147.58908K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PAPOLA is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PAPOLA is not available on ENCORE database.

  • 97 RBPs can affect the levels of PAPOLA.  








The Knockdown/knockout RNA-Seq assay for PAPOLA is not available on ENCORE database.





97 RBPs can affect the gene expression of PAPOLA :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PAPOLAENSG00000090060.133881.897705130.63700-0.402404.031602.85250HepG2ADAR
PAPOLAENSG00000090060.134741.102407592.16150-0.679307.897107.04910HepG2AKAP1
PAPOLAENSG00000090060.135648.842707728.93240-0.4523012.3765011.10770HepG2AUH
PAPOLAENSG00000090060.133429.119404814.81200-0.489603.408502.36940HepG2BCCIP
PAPOLAENSG00000090060.133009.427804184.11180-0.475403.669902.64550HepG2BCLAF1
PAPOLAENSG00000090060.135945.011106823.57950-0.198801.972801.31310HepG2CALR
PAPOLAENSG00000090060.135661.198809336.75260-0.721807.800606.14780HepG2CCAR1
PAPOLAENSG00000090060.134834.816305968.32970-0.303902.414601.68730HepG2CIRBP
PAPOLAENSG00000090060.134963.445105448.95700-0.134601.877801.31540HepG2CKAP4
PAPOLAENSG00000090060.134734.929606152.95530-0.377903.758602.96970HepG2CPSF6
PAPOLAENSG00000090060.135368.993906398.40200-0.253103.710602.98810HepG2CELF1
PAPOLAENSG00000090060.134987.483506879.86330-0.4641017.6722016.09220HepG2DAZAP1
PAPOLAENSG00000090060.134500.391805268.75960-0.227402.769701.60960HepG2DDX1
PAPOLAENSG00000090060.133381.237604439.14830-0.392704.605703.75590HepG2DDX21
PAPOLAENSG00000090060.132272.937303586.86370-0.658206.567904.56030HepG2DDX28
PAPOLAENSG00000090060.137714.954406255.062700.302502.874701.55740HepG2DDX47
PAPOLAENSG00000090060.133615.297404733.74330-0.388902.459201.72570HepG2DDX55
PAPOLAENSG00000090060.135742.240406934.78800-0.272202.221701.31330HepG2DDX5
PAPOLAENSG00000090060.134752.355506246.82600-0.394503.026402.38330HepG2DDX6
PAPOLAENSG00000090060.134174.421404982.90850-0.255402.205901.33070HepG2DHX30
PAPOLAENSG00000090060.134231.066105166.33340-0.288104.288703.43010HepG2DNAJC21
PAPOLAENSG00000090060.133803.698005120.64350-0.4289014.0517012.69940HepG2DNAJC2
PAPOLAENSG00000090060.132690.626606006.14390-1.1585019.2057017.74250HepG2EIF2S1
PAPOLAENSG00000090060.138697.858406462.117400.428602.777502.08780HepG2EIF4B
PAPOLAENSG00000090060.134225.727305325.74620-0.333803.787302.80900HepG2EWSR1
PAPOLAENSG00000090060.135347.707106696.05820-0.324402.620701.94750HepG2FXR1
PAPOLAENSG00000090060.135092.092606212.28300-0.286901.902901.34620HepG2G3BP1
PAPOLAENSG00000090060.133470.031905215.82750-0.5879010.179409.05620HepG2HNRNPA1
PAPOLAENSG00000090060.133362.447905801.62070-0.7869016.5053014.95070HepG2HNRNPC
PAPOLAENSG00000090060.134588.952606288.84830-0.454605.436904.48240HepG2HNRNPK
PAPOLAENSG00000090060.134170.821706267.03200-0.5875028.2518026.36660HepG2HNRNPL
PAPOLAENSG00000090060.133479.653305016.21160-0.527708.488706.97410HepG2HNRNPM
PAPOLAENSG00000090060.133250.336605763.26560-0.8263038.1620036.13630HepG2HNRNPU
PAPOLAENSG00000090060.135345.956305886.98890-0.139102.225601.56050HepG2ILF2
PAPOLAENSG00000090060.134095.935804982.06110-0.282506.554305.02160HepG2KIF1C
PAPOLAENSG00000090060.135090.218909856.69150-0.9534013.3251011.53720HepG2LARP4
PAPOLAENSG00000090060.135263.148906698.38990-0.347902.793102.13540HepG2MAGOH
PAPOLAENSG00000090060.134741.489805884.29950-0.311503.329902.44580HepG2MSI2
PAPOLAENSG00000090060.135195.351206894.94920-0.408303.537702.82550HepG2NCBP2
PAPOLAENSG00000090060.135455.654506822.05770-0.322504.691203.69820HepG2NOL12
PAPOLAENSG00000090060.134918.142606141.21860-0.320402.419301.74040HepG2PABPC4
PAPOLAENSG00000090060.134473.604405704.67500-0.350707.231205.96610HepG2PARN
PAPOLAENSG00000090060.134261.975705140.37640-0.270403.692302.85330HepG2PPIL4
PAPOLAENSG00000090060.136319.031205548.897500.187402.401501.67510HepG2PRPF4
PAPOLAENSG00000090060.132689.148003652.87930-0.441903.409802.52140HepG2PRPF8
PAPOLAENSG00000090060.133877.174806154.93150-0.6667024.0744022.76400HepG2PTBP1
PAPOLAENSG00000090060.135090.395406512.24810-0.355404.227203.50830HepG2PUF60
PAPOLAENSG00000090060.136231.823906913.03510-0.149702.522701.95090HepG2PUM1
PAPOLAENSG00000090060.133332.249405551.16880-0.7363033.6928031.98890HepG2PUS1
PAPOLAENSG00000090060.135566.589906666.23530-0.260103.464502.77610HepG2QKI
PAPOLAENSG00000090060.135974.795606849.96190-0.197202.964502.40760HepG2NELFE
PAPOLAENSG00000090060.135381.367006379.60170-0.245504.342803.59370HepG2RECQL
PAPOLAENSG00000090060.134249.989605173.87680-0.283802.059101.36270HepG2RPS2
PAPOLAENSG00000090060.134247.380805281.18250-0.314302.333801.35190HepG2RPS5
PAPOLAENSG00000090060.134057.978505132.45640-0.338908.304007.27700HepG2SAFB2
PAPOLAENSG00000090060.138139.257606588.349300.304902.936302.20860HepG2SF3B1
PAPOLAENSG00000090060.134368.578705985.33440-0.4543018.1760016.74810HepG2SMN1
PAPOLAENSG00000090060.136543.001008377.04280-0.356509.709908.92760HepG2SRFBP1
PAPOLAENSG00000090060.135164.289005833.41840-0.175802.284001.64720HepG2SRSF7
PAPOLAENSG00000090060.135894.750307312.56230-0.310908.139007.16750HepG2SUCLG1
PAPOLAENSG00000090060.132267.144203158.97290-0.478604.031002.85560HepG2TFIP11
PAPOLAENSG00000090060.134756.102905524.39260-0.216002.042501.32120HepG2TIA1
PAPOLAENSG00000090060.133910.701505600.17570-0.5180010.145909.29310HepG2TIAL1
PAPOLAENSG00000090060.134123.033505650.14450-0.4546012.2726011.20800HepG2TRIM56
PAPOLAENSG00000090060.131870.956302784.17660-0.573505.752104.64750HepG2UCHL5
PAPOLAENSG00000090060.135637.114406250.33400-0.149001.974301.36820HepG2UPF1
PAPOLAENSG00000090060.133025.770104316.30050-0.512502.866601.84440HepG2UPF2
PAPOLAENSG00000090060.133021.170904639.13620-0.618705.259504.26840HepG2XRN2
PAPOLAENSG00000090060.136317.701106874.17130-0.121801.817501.34890HepG2ZNF622
PAPOLAENSG00000090060.138508.9119010332.17930-0.280102.526201.36450K562ABCF1
PAPOLAENSG00000090060.132780.146503595.91330-0.371206.209703.91180K562AKAP1
PAPOLAENSG00000090060.133754.883904572.39630-0.284205.185003.85600K562BCLAF1
PAPOLAENSG00000090060.137307.542508476.69920-0.214103.026201.86510K562CPEB4
PAPOLAENSG00000090060.134944.270806832.47580-0.466707.784106.45920K562CPSF6
PAPOLAENSG00000090060.132964.747203468.84380-0.226502.517801.51480K562CSTF2
PAPOLAENSG00000090060.134885.127905702.94330-0.223303.205401.89520K562DDX21
PAPOLAENSG00000090060.137654.601108772.71180-0.196702.881902.21720K562DDX47
PAPOLAENSG00000090060.133030.721503694.06850-0.285503.675202.11020K562DDX6
PAPOLAENSG00000090060.132920.363303965.01970-0.441204.447603.27300K562EFTUD2
PAPOLAENSG00000090060.133170.642704002.08320-0.336005.896004.10170K562EIF2S1
PAPOLAENSG00000090060.134943.871006197.97870-0.326205.552804.58550K562EIF2S2
PAPOLAENSG00000090060.132990.319003806.59510-0.348203.500302.58090K562EIF4A3
PAPOLAENSG00000090060.132731.489403322.75950-0.282703.460701.98660K562EWSR1
PAPOLAENSG00000090060.136126.071307426.85890-0.277802.513101.70560K562FIP1L1
PAPOLAENSG00000090060.135056.443003958.696000.353006.339805.47910K562FXR1
PAPOLAENSG00000090060.136405.525604185.160000.613905.629004.54010K562G3BP2
PAPOLAENSG00000090060.135259.191106523.25850-0.310803.284402.42090K562GPKOW
PAPOLAENSG00000090060.136022.741308259.63470-0.455707.038705.82410K562GRSF1
PAPOLAENSG00000090060.132749.533304150.70670-0.5942010.339509.24530K562HNRNPC
PAPOLAENSG00000090060.136248.380507927.76080-0.343404.154502.83130K562HNRNPL
PAPOLAENSG00000090060.134501.787206108.55260-0.440304.111702.96110K562HNRNPM
PAPOLAENSG00000090060.133768.802305407.24370-0.5208011.392309.61030K562HNRNPU
PAPOLAENSG00000090060.138104.7488010069.44710-0.313103.128602.28450K562HSPD1
PAPOLAENSG00000090060.133973.629504865.86200-0.292202.670001.50620K562IGF2BP3
PAPOLAENSG00000090060.135387.826006367.45970-0.241002.125301.35660K562METAP2
PAPOLAENSG00000090060.133442.655205983.98110-0.7976037.4087035.05620K562MTPAP
PAPOLAENSG00000090060.136097.902506648.93840-0.124802.288401.60370K562NSUN2
PAPOLAENSG00000090060.136588.648208430.74490-0.355703.640102.67980K562PPIG
PAPOLAENSG00000090060.132528.170203721.45540-0.557808.241406.50310K562PSIP1
PAPOLAENSG00000090060.134140.150604885.39500-0.238802.256601.64800K562PTBP1
PAPOLAENSG00000090060.139879.7763011451.90990-0.213002.489401.57760K562PUM2
PAPOLAENSG00000090060.133018.353203930.60570-0.381002.687901.88450K562RPS19
PAPOLAENSG00000090060.134833.987403850.469700.328102.598301.55180K562SAFB
PAPOLAENSG00000090060.134955.507203980.861500.315902.828901.36890K562SDAD1
PAPOLAENSG00000090060.135616.473006560.51090-0.224103.046802.19320K562SF3A3
PAPOLAENSG00000090060.133459.602304353.32020-0.331504.147903.09540K562SF3B4
PAPOLAENSG00000090060.133617.296404522.60810-0.322202.968401.87390K562SRSF5
PAPOLAENSG00000090060.135379.499104334.355100.311603.266502.37510K562SYNCRIP
PAPOLAENSG00000090060.133803.156204847.28060-0.350003.173302.41570K562TARDBP
PAPOLAENSG00000090060.132439.947603405.60380-0.481104.373902.28930K562TFIP11
PAPOLAENSG00000090060.133710.585204675.66020-0.333503.874502.88390K562TIA1
PAPOLAENSG00000090060.135684.103204190.953200.439607.260805.96610K562U2AF2
PAPOLAENSG00000090060.135307.642107049.99470-0.409608.742707.55250K562UPF1
PAPOLAENSG00000090060.137182.722308955.47890-0.318203.342002.38190K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PAPOLA is not available on ENCORE database.





29 RBPs can affect the splicing of PAPOLA :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPAPOLAENSG00000090060.13chr14+9702698597027048970225119702275097029155970292300.067000.002670.04598includedK562SRSF1
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509702915597029230-0.298000.000000.00000excludedK562SF3B4
SEPAPOLAENSG00000090060.13chr14+9702698597027048970225119702275097031291970313250.139000.000070.05022includedHepG2NKRF
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509702915597029230-0.122000.000070.00454excludedK562PRPF8
SEPAPOLAENSG00000090060.13chr14+9702079897020840970188169701895997022183970222840.069000.000000.00000includedHepG2U2AF1
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509702915597029230-0.063000.000070.00216excludedHepG2U2AF1
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509702915597029230-0.115000.000000.00000excludedHepG2HNRNPK
SEPAPOLAENSG00000090060.13chr14+9702915597029230970225119702275097031291970313960.202000.000000.00052includedHepG2TBRG4
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509703129197031325-0.073000.005760.05927excludedHepG2U2AF2
SEPAPOLAENSG00000090060.13chr14+970221839702225997018816970189599702251197022750-0.080000.000000.00000excludedHepG2U2AF2
SEPAPOLAENSG00000090060.13chr14+969985539699875796997679969979239699884797001222-0.088000.000000.00000excludedK562AQR
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509703129197031385-0.464000.000000.00000excludedK562AQR
SEPAPOLAENSG00000090060.13chr14+969873009698740996986352969865659699164696991728-0.065000.000000.00003excludedK562AQR
SEPAPOLAENSG00000090060.13chr14+969937669699392996991580969917289699428996994343-0.054000.000050.00093excludedK562AQR
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509702915597029230-0.114000.000080.00197excludedK562PUS1
SEPAPOLAENSG00000090060.13chr14+969986749699875796997811969979239699884796999033-0.129000.000000.00000excludedK562PUS1
SEPAPOLAENSG00000090060.13chr14+9702698597027048970225119702275097031291970313250.065000.001950.07415includedHepG2SFPQ
SEPAPOLAENSG00000090060.13chr14+9702698597027048970225119702275097031291970313250.154000.000080.00676includedHepG2PTBP1
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509702915597029230-0.076000.000450.07823excludedK562GPKOW
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509702915597029230-0.107000.000300.02030excludedK562EFTUD2
SEPAPOLAENSG00000090060.13chr14+9702698597027048970225119702275097031291970313250.107000.001620.05999includedHepG2MATR3
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509702915597029230-0.151000.000020.00072excludedK562U2AF1
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509702915597029230-0.168000.000000.00000excludedK562HNRNPM
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509702915597029230-0.436000.000000.00000excludedK562HNRNPL
SEPAPOLAENSG00000090060.13chr14+9702698597027048970225119702275097031291970313250.090000.005320.09217includedHepG2SRSF1
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509702915597029230-0.177000.000000.00000excludedHepG2SF3A3
SEPAPOLAENSG00000090060.13chr14+9702698597027048970225119702275097031291970313250.114000.000260.02443includedHepG2TIAL1
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509702915597029230-0.143000.000000.00113excludedK562LARP7
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509703129197031325-0.163000.000110.00783excludedHepG2SF3B4
SEPAPOLAENSG00000090060.13chr14+970291559702923097022511970227509703129197031396-0.194000.000400.05416excludedK562RBM22
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509703129197031325-0.131000.000690.02591excludedK562UTP18
SEPAPOLAENSG00000090060.13chr14+969986749699875796997811969979239699884796998986-0.077000.000070.00414excludedK562UTP18
SEPAPOLAENSG00000090060.13chr14+970291559702923097022511970227509703129197031396-0.155000.002890.04691excludedK562U2AF2
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509702915597029230-0.199000.000000.00001excludedK562HNRNPU
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509702915597029230-0.067000.005300.09523excludedK562RBM15
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509702915597029230-0.214000.000000.00000excludedK562SF3B1
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509703129197031325-0.100000.000860.09952excludedK562ZC3H8
SEPAPOLAENSG00000090060.13chr14+970291559702923097022511970227509703129197031396-0.177000.000280.08302excludedHepG2XRN2
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509702915597029230-0.170000.000000.00060excludedK562HNRNPK
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509702915597029230-0.092000.000220.04514excludedK562NPM1
SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509702915597029230-0.288000.000000.00000excludedK562HNRNPC
A3SSPAPOLAENSG00000090060.13chr14+9698635296986565969863919698656596968734969689370.063000.000000.00000longerK562AQR
A3SSPAPOLAENSG00000090060.13chr14+9699374096993929969937669699392996991580969917280.066000.000000.00000longerK562AQR
A3SSPAPOLAENSG00000090060.13chr14+9702911897029230970291559702923097022511970227500.103000.011170.05811longerK562AQR
A3SSPAPOLAENSG00000090060.13chr14+9700909697009230970091109700923097008579970086330.070000.000370.00288longerK562AQR
A5SSPAPOLAENSG00000090060.13chr14+9699376696993929969937669699387696994289969943430.061000.000000.00000longerK562AQR
MXEPAPOLAENSG00000090060.13chr14+97020798970208409702218397022259970188169701895997022511970227500.113000.000000.000001includedHepG2U2AF1
MXEPAPOLAENSG00000090060.13chr14+97020798970208409702218397022297970188169701895997022511970227500.096000.000000.000001includedHepG2U2AF1
MXEPAPOLAENSG00000090060.13chr14+96993740969938769699425996994343969916469699172896997811969980650.094000.000000.000001includedK562AQR
MXEPAPOLAENSG00000090060.13chr14+96993740969938769699428996994343969916469699172896997811969979230.079000.000000.000001includedK562AQR
MXEPAPOLAENSG00000090060.13chr14+96991646969917289699376696993876969873429698740996994289969943430.100000.003710.061231includedK562PRPF8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PAPOLA is not avaliable on ENCORE database.