CHD8

General Information

Gene Name       : CHD8
Gene ID             : ENSG00000100888.13
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: CHD8)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CHD8ENSG00000100888.1338.1335.4636.80ENCSR000AEF
HepG2CHD8ENSG00000100888.1351.8347.3449.59ENCSR985KAT
K562CHD8ENSG00000100888.1324.9024.8324.86ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CHD8 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CHD8 RNA is bound by 50 proteins.  







eCLIP assay for CHD8 is not avaliable on ENCORE database.





50 proteins are bound to CHD8 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr142185366621853714-3'-UTR,intron-Distal4.273804.68575HepG2FXR2
chr142185345221853609-3'-UTR,intron-Distal,intron-Proximal4.052323.61011HepG2AKAP1
chr142185351321853591-3'-UTR,intron-Distal,intron-Proximal3.211983.13224HepG2ZC3H11A
chr142185365821853737-3'-UTR,intron-Distal3.399403.40404HepG2LSM11
chr142185349321853573-3'-UTR,intron-Distal,intron-Proximal3.891493.45012HepG2UPF1
chr142185348221853524-3'-UTR,intron-Distal3.492404.08943HepG2LIN28B
chr142185366721853727-3'-UTR,intron-Distal3.885745.91539HepG2DDX55
chr142185342321853493-3'-UTR,intron-Distal4.067983.07786HepG2UPF1
chr142190515221905200-5'-UTR,CDS,intron-Distal,intron-Proximal3.066963.25356HepG2DDX59
chr142190515521905258-5'-UTR,intron-Distal,intron-Proximal3.486383.84715HepG2HNRNPK
chr142192414621924199-5'-UTR,intron-Distal3.552195.34140HepG2PRPF8
chr142192417621924205-5'-UTR,intron-Distal4.345244.87288HepG2NCBP2
chr142192420521924245-5'-UTR,intron-Distal,intron-Proximal4.583465.12808HepG2NCBP2
chr142189603221896102-CDS,intron-Distal4.225757.48753K562ZNF622
chr142189439121894401-CDS,intron-Distal3.716063.88337HepG2FXR2
chr142189738121897433-CDS,intron-Distal3.4620410.21811HepG2GRWD1
chr142186777621867839-CDS,intron-Distal3.488706.51082HepG2PPIG
chr142186813821868259-CDS,intron-Distal,intron-Proximal3.453517.54792HepG2PRPF8
chr142189603021896052-CDS,intron-Distal4.9981412.14572HepG2BCLAF1
chr142189716121897250-CDS,intron-Distal,intron-Proximal3.434525.19933HepG2ZNF800
chr142187801821878119-CDS,intron-Distal,intron-Proximal4.603139.94776K562ZNF622
chr142186211821862225-CDS,intron-Distal,intron-Proximal3.111715.11011HepG2G3BP1
chr142185911921859147-CDS,intron-Distal4.117363.87995K562UCHL5
chr142188390121884012-CDS,intron-Distal3.6293120.91467HepG2BCLAF1
chr142186323321863292-CDS,intron-Distal,intron-Proximal3.277934.50511HepG2U2AF1
chr142185973921859798-CDS,intron-Distal3.170636.66257HepG2G3BP1
chr142189602721896057-CDS,intron-Distal,intron-Proximal3.440244.72836K562ZNF800
chr142187696021876984-CDS,intron-Distal4.2781310.57092HepG2BCLAF1
chr142186866021868763-CDS,intron-Distal4.856906.56513K562FXR2
chr142189617821896242-CDS,intron-Distal3.584338.50585HepG2GRWD1
chr142187810221878122-CDS,intron-Distal,intron-Proximal4.377615.13243HepG2GRWD1
chr142186163421861705-CDS,intron-Distal,intron-Proximal3.785285.22975HepG2G3BP1
chr142187693421876983-CDS,intron-Distal4.036727.16955K562UCHL5
chr142188388321883909-CDS,intron-Distal,intron-Proximal4.866876.94886HepG2GRWD1
chr142187658221876606-CDS,intron-Distal4.562386.03821HepG2GRWD1
chr142185406621854140-CDS,intron-Distal,intron-Proximal4.475153.48187K562RBM15
chr142185431121854356-CDS,intron-Distal3.526586.22359HepG2BUD13
chr142189746721897494-CDS,intron-Distal3.496156.58996HepG2GRWD1
chr142189920521899262-CDS,intron-Distal,intron-Proximal3.778813.06406HepG2IGF2BP1
chr142187014721870207-CDS,intron-Distal3.928105.77244K562UCHL5
chr142188377821883801-CDS,intron-Distal,intron-Proximal3.803564.88141HepG2GRWD1
chr142189737021897441-CDS,intron-Distal3.855217.95479K562ZNF622
chr142189722121897294-CDS,intron-Distal,intron-Proximal4.0582411.39323HepG2GRWD1
chr142189618521896270-CDS,intron-Distal4.2121810.22171K562UCHL5
chr142188390221883971-CDS,intron-Distal3.424716.32494K562UCHL5
chr142189617421896230-CDS,intron-Distal3.259064.45081HepG2ZNF800
chr142187171721871772-CDS,intron-Distal4.414509.72888HepG2GRWD1
chr142187801521878050-CDS,intron-Distal,intron-Proximal5.224606.71899HepG2FXR2
chr142188107321881123-CDS,intron-Distal3.132806.02234K562UCHL5
chr142186126721861301-CDS,intron-Distal3.758776.15459HepG2GRWD1
chr142189434721894402-CDS,intron-Distal,intron-Proximal3.794176.09767K562UCHL5
chr142189608721896291-CDS,intron-Distal3.6536418.56023HepG2FXR2
chr142189602421896107-CDS,intron-Distal,intron-Proximal3.357815.07065HepG2TRA2A
chr142187007321870118-CDS,intron-Distal,intron-Proximal4.662633.62536K562AQR
chr142189714021897186-CDS,intron-Distal3.471548.99805HepG2BCLAF1
chr142186345621863503-CDS,intron-Distal,intron-Proximal4.621516.00552HepG2G3BP1
chr142189618821896259-CDS,intron-Distal3.8331011.73537HepG2BCLAF1
chr142188391121883976-CDS,intron-Distal4.002799.81263HepG2FXR2
chr142187810521878135-CDS,intron-Distal,intron-Proximal3.554107.58656HepG2BCLAF1
chr142186345721863509-CDS,intron-Distal5.563636.28417HepG2FXR2
chr142188379821883911-CDS,intron-Distal,intron-Proximal4.035985.13777HepG2PRPF8
chr142187011721870122-CDS,intron-Distal3.264104.45064HepG2GRWD1
chr142188377621883849-CDS,intron-Distal,intron-Proximal3.247964.82455HepG2BUD13
chr142189727321897335-CDS,intron-Distal,intron-Proximal3.902773.06143HepG2IGF2BP1
chr142186345621863494-CDS,intron-Distal,intron-Proximal4.175418.94445HepG2BCLAF1
chr142187013621870196-CDS,intron-Distal4.807368.00597HepG2FXR2
chr142187686221876897-CDS,intron-Distal,intron-Proximal4.3554415.11988HepG2BCLAF1
chr142185905421859145-CDS,intron-Distal,intron-Proximal5.540079.41643K562AQR
chr142186311721863160-CDS,intron-Distal,intron-Proximal5.224606.71899HepG2FXR2
chr142189714921897221-CDS,intron-Distal,intron-Proximal5.7985915.47732HepG2GRWD1
chr142188306021883147-CDS,intron-Distal,intron-Proximal3.644363.91614K562BUD13
chr142185957921859643-CDS,intron-Distal,intron-Proximal5.1964713.44390HepG2PRPF8
chr142185906621859117-CDS,intron-Distal,intron-Proximal3.394127.87808HepG2BUD13
chr142187659421876674-CDS,intron-Distal3.134114.96117K562YBX3
chr142187172721871763-CDS,intron-Distal3.822433.00996K562BUD13
chr142187011621870185-CDS,intron-Distal3.863233.25631HepG2PRPF4
chr142188375021883778-CDS,intron-Distal3.849895.74979HepG2GRWD1
chr142186233121862390-CDS,intron-Distal,intron-Proximal3.423567.53508HepG2BUD13
chr142187501521875050-CDS,intron-Distal4.453163.79199HepG2PPIG
chr142186244921862493-CDS,intron-Distal,intron-Proximal3.943307.50845HepG2GRWD1
chr142189437621894398-CDS,intron-Distal4.698869.47159HepG2BCLAF1
chr142187015621870188-CDS,intron-Distal4.9601612.14572HepG2BCLAF1
chr142187800921878054-CDS,intron-Distal,intron-Proximal3.4654512.42637HepG2BCLAF1
chr142186780721867855-CDS,intron-Distal3.404924.04629HepG2G3BP1
chr142187171621871780-CDS,intron-Distal3.850336.64581K562YBX3
chr142189602421896072-CDS,intron-Distal,intron-Proximal3.142755.04837HepG2ZNF800
chr142186213521862264-CDS,intron-Distal,intron-Proximal4.897897.23707K562RBM15
chr142186179821861935-CDS,intron-Distal,intron-Proximal5.243178.78434K562FMR1
chr142185428821854356-CDS,intron-Distal4.314005.09550K562U2AF2
chr142186326621863277-CDS,intron-Distal,intron-Proximal3.300625.79905HepG2BCLAF1
chr142188312721883142-CDS,intron-Distal4.056033.99577HepG2BUD13
chr142185392621854019-CDS,intron-Distal3.585677.39309HepG2G3BP1
chr142189620221896273-CDS,intron-Distal4.037666.29174K562ZNF622
chr142186213621862153-CDS,intron-Distal4.650173.71264HepG2FXR2
chr142189438921894399-CDS,intron-Distal3.343213.80299HepG2GRWD1
chr142187342021873455-CDS,intron-Distal4.760379.74753HepG2BCLAF1
chr142188107221881123-CDS,intron-Distal4.3331014.01444HepG2BCLAF1
chr142189923521899259-CDS,intron-Distal,intron-Proximal3.355414.02291HepG2GRWD1
chr142186324121863296-CDS,intron-Distal,intron-Proximal5.3210715.82824HepG2U2AF2
chr142189602321896166-CDS,intron-Distal,intron-Proximal5.5879424.30509K562UCHL5
chr142186318621863254-CDS,intron-Distal,intron-Proximal4.558315.09222HepG2FXR2
chr142189610721896174-CDS,intron-Distal4.795055.88588HepG2TRA2A
chr142188376521883802-CDS,intron-Distal,intron-Proximal4.4666311.22295HepG2BCLAF1
chr142187342621873462-CDS,intron-Distal3.585135.52031HepG2GRWD1
chr142188302021883101-CDS,intron-Distal,intron-Proximal4.123634.98250K562AQR
chr142189606621896217-CDS,intron-Distal4.541105.91688K562TRA2A
chr142185968221859702-CDS,intron-Distal3.878153.35081HepG2G3BP1
chr142186602521866073-CDS,intron-Distal3.192893.68829K562YBX3
chr142188373221883757-CDS,intron-Distal,intron-Proximal4.352104.44454K562UCHL5
chr142189743321897467-CDS,intron-Distal4.104268.39611HepG2GRWD1
chr142189719021897236-CDS,intron-Distal,intron-Proximal3.847075.85226K562UCHL5
chr142185915921859221-CDS,intron-Distal5.284428.98602HepG2G3BP1
chr142189602821896062-CDS,intron-Distal4.248255.91377HepG2FXR2
chr142186159321861637-CDS,intron-Distal,intron-Proximal5.327995.35117HepG2PRPF8
chr142189963621899677-CDS,intron-Distal3.752115.14848K562ZNF622
chr142186308321863103-CDS,intron-Distal,intron-Proximal3.175934.06531HepG2GRWD1
chr142187011521870156-CDS,intron-Distal,intron-Proximal3.4639612.56545HepG2BCLAF1
chr142186212321862188-CDS,intron-Distal,intron-Proximal3.975274.56106HepG2EIF3H
chr142189605221896111-CDS,intron-Distal5.7100420.66082HepG2BCLAF1
chr142189613821896161-CDS,intron-Distal4.593084.91614HepG2GRWD1
chr142188390821883977-CDS,intron-Distal3.151225.57219K562PUM1
chr142187801521878055-CDS,intron-Distal,intron-Proximal3.199744.50748HepG2GRWD1
chr142187695421876981-CDS,intron-Distal4.139663.88780HepG2G3BP1
chr142189602721896047-CDS,intron-Distal,intron-Proximal4.715044.45558HepG2GRWD1
chr142186397721864013-CDS,intron-Distal3.176534.51003HepG2PPIG
chr142185995821860022-CDS,intron-Distal,intron-Proximal4.527739.08333HepG2PRPF8
chr142186598921866058-CDS,intron-Distal3.756874.48452HepG2FXR2
chr142186126721861407-CDS,intron-Distal4.792638.89942HepG2FXR2
chr142187172421871770-CDS,intron-Distal5.2531213.34895HepG2BCLAF1
chr142186781421867840-CDS,intron-Distal4.084544.68575HepG2FXR2
chr142186173521861865-CDS,intron-Distal,intron-Proximal5.601377.89484K562FXR2
chr142189607321896171-CDS,intron-Distal3.076203.43095HepG2SRSF1
chr142189602621896098-CDS,intron-Distal,intron-Proximal4.2880913.24825HepG2PPIG
chr142185430421854359-CDS,intron-Distal4.0296111.39545HepG2U2AF2
chr142186397521864023-CDS,intron-Distal,intron-Proximal3.537904.86632HepG2G3BP1
chr142188388321883901-CDS,intron-Distal,intron-Proximal4.3173010.89658HepG2BCLAF1
chr142189604721896104-CDS,intron-Distal4.397727.73111HepG2GRWD1
chr142191074521910843-intron-Distal4.171514.12666HepG2HNRNPK
chr142186546121865512-intron-Distal4.880075.80194K562SSB
chr142186550421865512-intron-Distal4.09619400.00000HepG2NOLC1
chr142186031521860345-intron-Distal6.89517400.00000HepG2NOLC1
chr142186547021865482-intron-Distal4.6304379.02475K562ZRANB2
chr142186036821860386-intron-Distal5.95819400.00000HepG2NOLC1
chr142188304721883096-intron-Distal,intron-Proximal5.111516.01989HepG2PRPF8
chr142186545121865514-intron-Distal3.174764.45479K562ZC3H8
chr142186546921865471-intron-Distal5.1595925.41464HepG2NOLC1
chr142186034221860372-intron-Distal3.678233.03650K562PHF6
chr142186030721860315-intron-Distal7.3200751.75251HepG2NOLC1
chr142186546921865513-intron-Distal3.3497524.85118HepG2NIP7
chr142186551821865540-intron-Distal4.77840400.00000HepG2DKC1
chr142186551321865564-intron-Distal4.2500046.38558K562AATF
chr142191073921910790-intron-Distal6.0985130.10870HepG2PCBP2
chr142186550521865512-intron-Distal7.80392400.00000HepG2LARP7
chr142190871821908771-intron-Distal3.814925.38389HepG2PCBP2
chr142186030721860407-intron-Distal3.295017.43883K562HNRNPUL1
chr142186031721860334-intron-Distal4.7323410.96478HepG2NIP7
chr142186545421865459-intron-Distal3.9494417.38759HepG2DKC1
chr142192051621920592-intron-Distal4.145253.58660HepG2ILF3
chr142186351621863564-intron-Distal,intron-Proximal5.103316.75320K562AQR
chr142186549621865501-intron-Distal7.01302400.00000K562LARP7
chr142186156721861635-intron-Distal,intron-Proximal3.992114.98250K562AQR
chr142186554021865548-intron-Distal5.05673400.00000HepG2DKC1
chr142186546221865482-intron-Distal10.11811400.00000HepG2LARP7
chr142186031621860339-intron-Distal3.6852914.02820K562SMNDC1
chr142186551221865560-intron-Distal7.73955400.00000HepG2LARP7
chr142191079021910824-intron-Distal6.2626818.08872HepG2PCBP2
chr142186551221865564-intron-Distal3.731585.84607K562SSB
chr142187154621871610-intron-Distal,intron-Proximal5.234825.69951K562AQR
chr142186031321860408-intron-Distal3.1390110.15406K562PTBP1
chr142186053721860616-intron-Distal,intron-Proximal4.161485.75173HepG2QKI
chr142192151621921639-intron-Distal3.333347.95978HepG2PTBP1
chr142186030721860312-intron-Distal9.5693254.91101HepG2LARP7
chr142186040721860413-intron-Distal3.1914710.47311HepG2EXOSC5
chr142186054121860600-intron-Distal,intron-Proximal5.077583.78039K562QKI
chr142186036421860415-intron-Distal4.5578663.44516K562LARP7
chr142191073221910819-intron-Distal3.775275.59712K562ILF3
chr142186036621860402-intron-Distal6.41552400.00000HepG2LARP7
chr142186555321865561-intron-Distal5.39954400.00000K562LARP7
chr142186036921860416-intron-Distal4.106129.49422HepG2PTBP1
chr142191057121910626-intron-Distal3.685484.24164HepG2DDX59
chr142186549321865503-intron-Distal4.55933400.00000HepG2NOLC1
chr142191073621910830-intron-Distal4.637454.76405HepG2ILF3
chr142186554821865561-intron-Distal4.61971400.00000HepG2DKC1
chr142186040021860415-intron-Distal5.1836929.26536HepG2DKC1
chr142186551721865554-intron-Distal4.6826774.34265HepG2NIP7
chr142186546921865515-intron-Distal3.0513915.78861K562PHF6
chr142186061421860664-intron-Distal,intron-Proximal3.992114.52312K562AQR
chr142186548221865513-intron-Distal4.14213400.00000K562ZRANB2
chr142186036821860414-intron-Distal5.5852710.29201K562AATF
chr142186031221860351-intron-Distal7.38681400.00000HepG2LARP7
chr142186031221860414-intron-Distal3.933183.50142K562SSB
chr142186544821865485-intron-Distal4.9135132.64142K562SMNDC1
chr142191013021910215-intron-Distal4.245033.05187HepG2QKI
chr142186035121860366-intron-Distal7.10953400.00000HepG2LARP7
chr142186555421865561-intron-Distal5.9320161.11084HepG2NIP7
chr142191075021910835-intron-Distal4.033185.83708HepG2DDX59
chr142186302421863070-intron-Distal,intron-Proximal5.012856.22530K562AQR
chr142186545621865496-intron-Distal7.22061400.00000K562LARP7
chr142186107521861137-intron-Distal3.791624.21358HepG2U2AF2
chr142186392621863976-intron-Distal,intron-Proximal4.123634.89208K562AQR
chr142186552421865555-intron-Distal4.24007400.00000HepG2NOLC1
chr142186551221865535-intron-Distal4.0812729.79304K562SMNDC1
chr142188360121883660-intron-Distal,intron-Proximal4.366174.22101K562PRPF8
chr142186030721860401-intron-Distal4.5391924.53548K562SF3B4
chr142186040621860413-intron-Distal6.4523338.78199HepG2NIP7
chr142186351421863562-intron-Distal,intron-Proximal3.191224.89521HepG2U2AF2
chr142186040221860412-intron-Distal5.4184828.38637HepG2LARP7
chr142186033421860365-intron-Distal4.4713217.25397HepG2NIP7
chr142186036421860403-intron-Distal3.652015.77609K562SMNDC1
chr142186030821860341-intron-Distal5.8777518.15020K562AATF
chr142186036821860397-intron-Distal6.35897400.00000HepG2DKC1
chr142186550121865514-intron-Distal6.93403400.00000K562LARP7
chr142186030721860363-intron-Distal5.69264400.00000HepG2DKC1
chr142186549721865502-intron-Distal8.57523400.00000HepG2LARP7
chr142186550621865561-intron-Distal3.0985819.75562K562SF3B4
chr142186547121865492-intron-Distal5.05814400.00000HepG2NOLC1
chr142186545821865513-intron-Distal4.2504961.18962K562AATF
chr142186037221860401-intron-Distal4.602234.57196K562PHF6
chr142186551421865553-intron-Distal6.47667400.00000K562LARP7
chr142186551221865518-intron-Distal4.83098400.00000HepG2DKC1
chr142186939221869540-intron-Distal,intron-Proximal3.691555.20123K562KHSRP
chr142186555521865561-intron-Distal4.55356400.00000HepG2NOLC1
chr142186545021865459-intron-Distal10.05528400.00000HepG2LARP7
chr142186551221865524-intron-Distal3.65466400.00000HepG2NOLC1
chr142186030721860316-intron-Distal4.3278013.59721K562SMNDC1
chr142186017921860237-intron-Distal,intron-Proximal3.367623.16095HepG2U2AF2
chr142186032521860364-intron-Distal4.3492335.32841K562LARP7
chr142186036521860406-intron-Distal6.2885446.56954HepG2NIP7
chr142186034121860368-intron-Distal6.0959221.80237K562AATF
chr142186545921865462-intron-Distal10.11897400.00000HepG2LARP7
chr142186548221865497-intron-Distal9.11685400.00000HepG2LARP7
chr142186030721860346-intron-Distal3.628097.10707HepG2WDR43
chr142186034521860368-intron-Distal6.19034400.00000HepG2NOLC1
chr142186545921865511-intron-Distal4.61756400.00000HepG2DKC1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CHD8 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CHD8 is not available on ENCORE database.

  • 57 RBPs can affect the levels of CHD8.  








The Knockdown/knockout RNA-Seq assay for CHD8 is not available on ENCORE database.





57 RBPs can affect the gene expression of CHD8 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CHD8ENSG00000100888.83429.982402836.931300.273802.306701.32570HepG2AATF
CHD8ENSG00000100888.82820.685103317.40820-0.234003.608702.93070HepG2ACO1
CHD8ENSG00000100888.85266.281903970.733200.407303.179902.61430HepG2AKAP1
CHD8ENSG00000100888.83871.047003332.915200.215802.836702.06080HepG2AKAP8L
CHD8ENSG00000100888.83607.261005533.50550-0.617309.907208.86450HepG2BOP1
CHD8ENSG00000100888.83831.712105080.11500-0.406904.184703.35470HepG2CPSF6
CHD8ENSG00000100888.83916.489604407.72110-0.170502.482401.77510HepG2DAZAP1
CHD8ENSG00000100888.85347.177803803.658800.491305.091304.26560HepG2DDX3X
CHD8ENSG00000100888.82441.949902934.97080-0.265302.181401.30930HepG2DHX30
CHD8ENSG00000100888.82571.255403016.11080-0.230203.851803.10850HepG2DNAJC2
CHD8ENSG00000100888.83393.613802443.451500.473804.879503.70530HepG2EIF3D
CHD8ENSG00000100888.84395.606103471.227400.340502.403301.80640HepG2EIF4A3
CHD8ENSG00000100888.86155.926104642.145100.407103.651002.77470HepG2FIP1L1
CHD8ENSG00000100888.82845.911802174.805100.387904.204503.24530HepG2FUBP3
CHD8ENSG00000100888.84414.738203502.334100.333902.648501.97170HepG2FXR1
CHD8ENSG00000100888.84188.333203248.922500.366302.833702.16110HepG2G3BP1
CHD8ENSG00000100888.84051.038804751.28610-0.230003.070202.31720HepG2HNRNPF
CHD8ENSG00000100888.84009.517705495.77070-0.454904.947304.13050HepG2HNRNPLL
CHD8ENSG00000100888.83733.678704678.68390-0.325503.886303.03950HepG2IGF2BP1
CHD8ENSG00000100888.85039.650806386.11940-0.341602.178001.44890HepG2LARP4
CHD8ENSG00000100888.84447.351603757.889900.242902.500101.72940HepG2MSI2
CHD8ENSG00000100888.85039.371303606.152800.482704.730603.91520HepG2NCBP2
CHD8ENSG00000100888.83929.167303301.041700.251203.871803.17940HepG2PCBP1
CHD8ENSG00000100888.82621.615303027.72030-0.207802.140401.48450HepG2PPIL4
CHD8ENSG00000100888.84466.292003359.028800.410908.961808.09010HepG2PTBP1
CHD8ENSG00000100888.83504.796004172.29870-0.251502.123401.59150HepG2PUF60
CHD8ENSG00000100888.83768.309803378.981500.157201.955801.41850HepG2PUS1
CHD8ENSG00000100888.84411.236403637.707800.278103.537102.84280HepG2QKI
CHD8ENSG00000100888.84625.212303455.998200.420302.018401.40690HepG2RAVER1
CHD8ENSG00000100888.83866.734503301.530400.227902.033001.44940HepG2RBM25
CHD8ENSG00000100888.84715.650003738.197200.335006.500105.72950HepG2NELFE
CHD8ENSG00000100888.83946.963903481.766500.180802.299301.73090HepG2RECQL
CHD8ENSG00000100888.83206.656702377.603900.431505.625404.78350HepG2RPS19
CHD8ENSG00000100888.82669.801003023.05300-0.179302.311301.71410HepG2SAFB2
CHD8ENSG00000100888.84105.726103497.011500.231403.444102.79360HepG2SF3B4
CHD8ENSG00000100888.85763.609103650.192700.6589026.8854025.74280HepG2SRSF1
CHD8ENSG00000100888.83686.087404667.90060-0.340706.423305.43360HepG2SRSF7
CHD8ENSG00000100888.84341.326904890.31300-0.171802.243301.77060HepG2SSB
CHD8ENSG00000100888.84338.626705356.27180-0.304002.744802.02300HepG2TARDBP
CHD8ENSG00000100888.82690.128703327.98010-0.307005.367904.63320HepG2TRIM56
CHD8ENSG00000100888.86541.378303971.532500.7198012.6979011.31840HepG2U2AF1
CHD8ENSG00000100888.81229.786901848.11420-0.587606.277405.12600HepG2UCHL5
CHD8ENSG00000100888.82175.902102864.70230-0.396802.323301.40940HepG2UPF2
CHD8ENSG00000100888.84975.980904166.688200.256004.555103.81780HepG2UTP3
CHD8ENSG00000100888.82287.666203079.73550-0.428904.028903.16200HepG2XRN2
CHD8ENSG00000100888.83921.880302616.889700.583608.209307.28670K562AQR
CHD8ENSG00000100888.81536.494302108.37090-0.456504.335503.23610K562BOP1
CHD8ENSG00000100888.83821.005903219.581500.247003.387902.67710K562DDX47
CHD8ENSG00000100888.82465.064801891.097100.382302.842601.79390K562EIF3D
CHD8ENSG00000100888.81575.339601352.552500.219902.069701.37350K562EIF3G
CHD8ENSG00000100888.81849.354301409.790900.391403.654002.71390K562EIF4A3
CHD8ENSG00000100888.81857.322402703.15590-0.541406.986305.58280K562FIP1L1
CHD8ENSG00000100888.82201.388601466.114600.586307.741206.79720K562FXR1
CHD8ENSG00000100888.82476.660103174.44310-0.358103.981503.07750K562GRSF1
CHD8ENSG00000100888.81906.217801583.928400.267102.256001.70930K562HNRNPC
CHD8ENSG00000100888.82258.975403665.01540-0.6982011.293509.71180K562HSPD1
CHD8ENSG00000100888.81922.412903068.50370-0.674609.981008.14290K562PPIG
CHD8ENSG00000100888.81085.485901420.10690-0.387703.582902.53550K562PSIP1
CHD8ENSG00000100888.82322.935601758.547200.401504.085402.76050K562SAFB
CHD8ENSG00000100888.81089.448001369.27980-0.329803.180902.26310K562SF3B4
CHD8ENSG00000100888.82689.706101685.678900.674002.963901.67790K562SNRNP200
CHD8ENSG00000100888.82491.126501675.520400.572109.106507.83190K562SRSF1
CHD8ENSG00000100888.82452.556001979.627200.309002.967802.11460K562SYNCRIP
CHD8ENSG00000100888.82956.052802588.695200.191302.487801.68320K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CHD8 is not available on ENCORE database.





11 RBPs can affect the splicing of CHD8 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECHD8ENSG00000100888.8chr14-218634562186351121863070218632782186397521864051-0.193000.005890.08390excludedK562SF3B4
SECHD8ENSG00000100888.8chr14-218596212185980121859105218592222185999121860105-0.156000.000000.00000excludedHepG2U2AF1
SECHD8ENSG00000100888.8chr14-218596212185980121859105218592222185999121860105-0.194000.000000.00000excludedHepG2U2AF2
SECHD8ENSG00000100888.8chr14-218634562186351121863070218632782186397521864111-0.152000.000000.00002excludedK562AQR
SECHD8ENSG00000100888.8chr14-218824592188257721881071218811552188309621883152-0.135000.000430.00600excludedK562AQR
SECHD8ENSG00000100888.8chr14-218597042185980121859105218592222185999121860169-0.086000.006540.05794excludedK562AQR
SECHD8ENSG00000100888.8chr14-218596212185980121859105218592222185999121860105-0.054000.000510.05613excludedHepG2LARP4
SECHD8ENSG00000100888.8chr14-218596212185980121859105218592222185999121860105-0.083000.000680.05078excludedHepG2TIAL1
SECHD8ENSG00000100888.8chr14-218596212185980121859105218592222185999121860105-0.080000.000090.02510excludedK562EIF4G2
SECHD8ENSG00000100888.8chr14-218596212185980121859105218592222185999121860105-0.086000.000050.01342excludedHepG2KHSRP
SECHD8ENSG00000100888.8chr14-218596212185980121859105218592222185999121860105-0.119000.000630.02787excludedK562PTBP1
A3SSCHD8ENSG00000100888.8chr14-2186830921868490218683092186846621868571218687710.267000.000000.00042longerHepG2SF3A3
A3SSCHD8ENSG00000100888.8chr14-2185910521859294218591052185922221859621218598010.074000.000020.00018longerK562AQR
A3SSCHD8ENSG00000100888.8chr14-2186956121869704218695612186967221870115218703240.120000.000000.00000longerK562AQR
A3SSCHD8ENSG00000100888.8chr14-2186598121866177218659812186611121867760218679210.096000.000100.00085longerK562AQR
A3SSCHD8ENSG00000100888.8chr14-2185416921854409218541692185433521859105218592220.146000.000000.00000longerK562AQR
A3SSCHD8ENSG00000100888.8chr14-2186867821868786218686782186877121869033218692300.082000.002590.01619longerK562AQR
A3SSCHD8ENSG00000100888.8chr14-2187011521870342218701152187029521870494218706620.108000.000120.00104longerK562AQR
A3SSCHD8ENSG00000100888.8chr14-2185999121860185218599912186010521860665218609470.185000.000000.00000longerK562AQR
A3SSCHD8ENSG00000100888.8chr14-218591052185929421859105218592462185962121859801-0.567000.002890.01782shorterK562AQR
RICHD8ENSG00000100888.8chr14-2186813921868388218681392186822921868309218683880.082000.000000.00000includedHepG2SF3A3
MXECHD8ENSG00000100888.8chr14-2188107121881155218824592188257721878009218781472188309621883152-0.162000.003280.062962includedHepG2DDX55
MXECHD8ENSG00000100888.8chr14-2188107121881155218824592188257721878009218781472188309621883152-0.195000.000380.003542includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CHD8 is not avaliable on ENCORE database.