AGA

General Information

Gene Name       : AGA
Gene ID             : ENSG00000038002.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AGA)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878AGAENSG00000038002.824.9925.2625.12ENCSR000AEF
HepG2AGAENSG00000038002.824.9919.8022.39ENCSR985KAT
K562AGAENSG00000038002.814.9311.8413.38ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AGA is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on AGA RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for AGA is not avaliable on ENCORE database.






NO known proteins are bound to AGA RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for AGA is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AGA is not available on ENCORE database.

  • 65 RBPs can affect the levels of AGA.  








The Knockdown/knockout RNA-Seq assay for AGA is not available on ENCORE database.





65 RBPs can affect the gene expression of AGA :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AGAENSG00000038002.4433.35580271.276300.675704.829303.56090HepG2ADAR
AGAENSG00000038002.4970.55120533.459700.863308.041307.18530HepG2AKAP1
AGAENSG00000038002.4499.96720355.499300.491904.192703.26210HepG2AKAP8L
AGAENSG00000038002.4455.46330343.278200.407902.405201.68240HepG2CALR
AGAENSG00000038002.4273.05290353.75020-0.373602.272401.66080HepG2CKAP4
AGAENSG00000038002.4873.18250259.305401.7515020.0470018.04930HepG2CNOT7
AGAENSG00000038002.41306.41490451.948801.5313053.2058051.12740HepG2CELF1
AGAENSG00000038002.4432.99930288.934800.583502.846702.06300HepG2DDX55
AGAENSG00000038002.4719.50750439.025700.712605.393404.55710HepG2DDX6
AGAENSG00000038002.4481.53410273.150500.817809.024407.80740HepG2DNAJC21
AGAENSG00000038002.4495.80060311.462800.670605.167803.59950HepG2EIF2S2
AGAENSG00000038002.4386.26730269.105000.521302.816801.90710HepG2EIF3D
AGAENSG00000038002.4757.73780454.063400.738704.942904.04040HepG2EIF4B
AGAENSG00000038002.41133.31190592.010300.9368020.3194018.94400HepG2ETF1
AGAENSG00000038002.4625.46650414.707600.592703.060502.25490HepG2FIP1L1
AGAENSG00000038002.4345.87100470.57690-0.444202.380401.73670HepG2FXR1
AGAENSG00000038002.4333.90960463.44750-0.472902.633501.76590HepG2G3BP2
AGAENSG00000038002.4621.91160446.554600.477804.823203.64240HepG2HNRNPA2B1
AGAENSG00000038002.4272.72450366.18710-0.425102.721602.00930HepG2HNRNPF
AGAENSG00000038002.4570.14370442.521700.365503.523902.77030HepG2HNRNPL
AGAENSG00000038002.484.41210304.72070-1.8520024.3365022.67860HepG2HNRNPU
AGAENSG00000038002.4428.98230311.260600.462704.064103.19340HepG2ILF2
AGAENSG00000038002.4413.76570323.458800.355102.393901.44450HepG2KIF1C
AGAENSG00000038002.4467.68170356.179300.392802.380201.33340HepG2LARP7
AGAENSG00000038002.4326.62380484.49010-0.568803.351202.65590HepG2NCBP2
AGAENSG00000038002.4359.43010481.75940-0.422602.572601.83780HepG2NOL12
AGAENSG00000038002.4473.30780301.610300.650006.318505.11910HepG2PARN
AGAENSG00000038002.41210.15070488.259401.3094038.3106036.62410HepG2PUM1
AGAENSG00000038002.4370.17540479.64360-0.373802.375101.86700HepG2NELFE
AGAENSG00000038002.4296.11670394.49040-0.413802.185001.56890HepG2RPLP0
AGAENSG00000038002.4333.95720448.71400-0.426102.862702.26290HepG2SF3B4
AGAENSG00000038002.4423.19640316.445300.419303.183602.50100HepG2SMN1
AGAENSG00000038002.4512.67940333.534900.620102.934102.12760HepG2SNRNP70
AGAENSG00000038002.4851.23290558.865900.607008.883208.12560HepG2SRFBP1
AGAENSG00000038002.4296.20940468.35720-0.661006.067605.43430HepG2SRSF1
AGAENSG00000038002.4683.99740454.146200.590707.561306.59480HepG2SRSF5
AGAENSG00000038002.4732.84900381.030900.9435017.2897016.12440HepG2SRSF9
AGAENSG00000038002.4428.81740287.623200.576102.746702.07190HepG2SUPV3L1
AGAENSG00000038002.4522.14900420.969100.310601.920501.43840HepG2TAF15
AGAENSG00000038002.4326.74420192.779500.761104.648603.40510HepG2TFIP11
AGAENSG00000038002.4213.63130296.06010-0.470802.448501.97300HepG2TIAL1
AGAENSG00000038002.4161.37260321.35040-0.993804.612103.87070HepG2UTP3
AGAENSG00000038002.4534.58270294.289000.8611011.9526010.72130HepG2ZC3H8
AGAENSG00000038002.4175.80750407.73750-1.2136014.0472012.87220K562AGGF1
AGAENSG00000038002.4253.84480424.26880-0.741005.665004.71130K562AKAP8L
AGAENSG00000038002.4151.89920258.09700-0.764803.652302.99640K562AQR
AGAENSG00000038002.4296.62870445.15910-0.585704.694303.46830K562ATP5C1
AGAENSG00000038002.4154.58930228.17980-0.561702.731501.63280K562CPEB4
AGAENSG00000038002.4346.66160478.38760-0.464702.813001.33680K562DDX19B
AGAENSG00000038002.4329.45960456.54690-0.470703.487902.48890K562DKC1
AGAENSG00000038002.4396.30460182.628401.117609.241608.04420K562EIF2S2
AGAENSG00000038002.466.26120126.77280-0.936003.285802.15110K562EIF3D
AGAENSG00000038002.4102.10510172.21130-0.754103.178702.32780K562EIF3G
AGAENSG00000038002.4196.47520123.698600.667403.094802.22840K562EIF4A3
AGAENSG00000038002.492.91400195.95150-1.076506.844605.43480K562HNRNPU
AGAENSG00000038002.4457.69270205.828401.1528011.7811010.16710K562HSPD1
AGAENSG00000038002.4316.41750450.25710-0.508903.430402.50020K562KIF1C
AGAENSG00000038002.4341.62250504.40140-0.562204.450703.24420K562MBNL1
AGAENSG00000038002.4197.30990353.54870-0.841404.554103.33330K562NAA15
AGAENSG00000038002.474.49190139.71560-0.907303.547402.44220K562PCBP2
AGAENSG00000038002.4489.94240326.179300.586804.104602.78520K562PUM1
AGAENSG00000038002.4216.53280420.76200-0.958407.503406.65540K562PUS1
AGAENSG00000038002.4221.31680409.96610-0.889408.249107.25380K562RBM15
AGAENSG00000038002.4105.96650260.62110-1.298304.571802.47220K562RBM39
AGAENSG00000038002.4112.79750179.23380-0.668102.931902.09520K562SF3A3
AGAENSG00000038002.475.31940125.76060-0.739602.864701.99420K562SF3B4
AGAENSG00000038002.4115.51800183.63250-0.668703.046602.06990K562SRPK2
AGAENSG00000038002.488.59870149.56270-0.755403.024302.28770K562SRSF1
AGAENSG00000038002.486.20930145.52480-0.755303.234901.96360K562SRSF7
AGAENSG00000038002.4207.28020146.010300.505402.057301.35910K562TIA1
AGAENSG00000038002.4252.48680426.60500-0.756703.186801.76490K562UTP18
AGAENSG00000038002.496.94830171.35690-0.821704.257003.22360K562WDR43
AGAENSG00000038002.478.03650187.49170-1.264605.034101.90070K562ZRANB2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AGA is not available on ENCORE database.






No RBPs affect the alternative splcing events of AGA on ENCORE database.





The Knockdown/knockout RNA-Seq assay for AGA is not avaliable on ENCORE database.