UBAC2

General Information

Gene Name       : UBAC2
Gene ID             : ENSG00000134882.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: UBAC2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878UBAC2ENSG00000134882.1514.0612.2513.16ENCSR000AEF
HepG2UBAC2ENSG00000134882.1542.2951.7647.02ENCSR985KAT
K562UBAC2ENSG00000134882.1530.5630.6530.60ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for UBAC2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • UBAC2 RNA is bound by 25 proteins.  







eCLIP assay for UBAC2 is not avaliable on ENCORE database.





25 proteins are bound to UBAC2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr13100038334100038419+3'-UTR4.727576.38589HepG2AKAP1
chr13100038032100038139+3'-UTR4.407459.01880HepG2UPF1
chr13100038213100038266+3'-UTR3.410413.06830K562UPF1
chr13100038298100038431+3'-UTR4.8421311.97213K562UPF1
chr13100038545100038612+3'-UTR3.871415.61622K562UPF1
chr13100038464100038546+3'-UTR4.557315.45170HepG2AKAP1
chr13100037813100037860+3'-UTR3.905013.54514K562TIA1
chr13100038273100038362+3'-UTR4.5685316.14270HepG2UPF1
chr13100038446100038536+3'-UTR5.4789810.64766HepG2UPF1
chr13100038479100038545+3'-UTR4.337855.61622K562UPF1
chr13100038362100038446+3'-UTR5.2889919.38671HepG2UPF1
chr139985310499853195+5'-UTR,CDS,intron-Proximal5.0280113.83562HepG2DDX3X
chr139985329199853334+5'-UTR,intron-Distal,intron-Proximal3.909606.28005HepG2XPO5
chr139985311499853172+5'-UTR,CDS4.396404.66602K562DDX3X
chr139985324299853291+5'-UTR,intron-Proximal5.3090312.96050HepG2XPO5
chr13100020089100020147+CDS4.277956.91908HepG2SND1
chr139989067899890811+CDS,intron-Proximal3.232517.75835K562DDX3X
chr139999275699992825+CDS,intron-Proximal3.815863.34184HepG2GRWD1
chr139999265399992756+CDS3.044073.11550HepG2YBX3
chr139989078999890845+CDS,intron-Proximal4.130255.05356HepG2PRPF8
chr139989067999890777+CDS,intron-Proximal3.5381517.48163HepG2DDX3X
chr139987744299877493+intron-Distal3.720303.26999K562KHSRP
chr139991865599918750+intron-Distal4.681104.51735HepG2QKI
chr139993133899931467+intron-Distal4.277343.77802HepG2U2AF2
chr139990335899903441+intron-Distal3.932285.89423HepG2HNRNPM
chr139985796199857966+intron-Distal6.8857611.39978HepG2LARP7
chr139985815499858180+intron-Distal7.91572400.00000K562LARP7
chr139994645999946486+intron-Distal4.587283.55640HepG2QKI
chr139998934799989396+intron-Distal3.804793.29248HepG2SUGP2
chr139997586699975990+intron-Distal3.503725.38424HepG2HNRNPL
chr139993302899933135+intron-Distal4.8796017.59802K562PTBP1
chr139986673099866809+intron-Distal4.091594.10336HepG2SUGP2
chr139985800399858068+intron-Distal8.75475400.00000K562LARP7
chr139994648699946527+intron-Distal4.677573.55640HepG2QKI
chr139997160799971688+intron-Distal4.126993.98095HepG2HNRNPL
chr139998912499989272+intron-Distal3.245023.00437HepG2HNRNPK
chr139985806899858085+intron-Distal8.02686400.00000K562LARP7
chr13100022505100022583+intron-Distal4.432135.54597K562TARDBP
chr139990032599900391+intron-Distal3.447653.89405HepG2PTBP1
chr139993252799932625+intron-Distal3.854973.37631K562HNRNPL
chr139986095899861035+intron-Distal3.806915.78794HepG2SUGP2
chr139985809999858107+intron-Distal7.66516400.00000K562LARP7
chr139997002199970074+intron-Distal3.831823.14375HepG2RBFOX2
chr139985801799858066+intron-Distal6.49499400.00000HepG2LARP7
chr139996727499967352+intron-Distal4.324254.51735HepG2QKI
chr139985801799858066+intron-Distal3.554779.44104HepG2DGCR8
chr13100017891100017980+intron-Distal4.272075.41654K562KHSRP
chr139990336499903445+intron-Distal4.185806.98035HepG2MATR3
chr139990362499903667+intron-Distal3.499734.81844HepG2SUGP2
chr139990114999901239+intron-Distal3.083303.10639HepG2PTBP1
chr139990032399900385+intron-Distal3.351854.41421K562PTBP1
chr139991056999910662+intron-Distal3.078183.33745HepG2HNRNPM
chr139985807899858122+intron-Distal7.0058256.76560HepG2LARP7
chr139988131099881415+intron-Distal4.358864.31871HepG2HNRNPM
chr139990406999904110+intron-Distal3.472514.57452HepG2SUGP2
chr139985975099859809+intron-Distal3.994046.25619HepG2SUGP2
chr139990214999902201+intron-Distal4.662156.62827HepG2SUGP2
chr139985926399859341+intron-Distal5.036756.42900HepG2PTBP1
chr139991927199919331+intron-Distal5.252156.17200HepG2PCBP2
chr139986087599860958+intron-Distal3.564477.75281HepG2SUGP2
chr139993304399933143+intron-Distal4.4168123.76316HepG2PTBP1
chr139985796699858017+intron-Distal9.2258254.91101HepG2LARP7
chr139985800199858071+intron-Distal4.8648637.92657K562AATF
chr139993138499931478+intron-Distal5.3641214.08485HepG2PCBP2
chr139985806999858078+intron-Distal6.7410144.93575HepG2LARP7
chr139985810799858118+intron-Distal7.42197400.00000K562LARP7
chr139993305099933129+intron-Distal3.747893.91876HepG2U2AF2
chr139985811899858145+intron-Distal7.16235400.00000K562LARP7
chr139985941999859478+intron-Distal3.614044.60009HepG2SUGP2
chr139990377199903813+intron-Distal3.338973.84025HepG2SUGP2
chr139985799099858002+intron-Distal8.49477400.00000K562LARP7
chr139990248799902532+intron-Distal4.190054.03915HepG2SUGP2
chr139990013299900227+intron-Distal5.7940312.98435HepG2PTBP1
chr139987491199875073+intron-Distal3.723515.56048K562KHSRP
chr139990334799903377+intron-Distal3.111273.10640HepG2SUGP2
chr139999842799998481+intron-Distal4.005613.82414HepG2HNRNPK
chr139991244399912510+intron-Distal3.641835.78794HepG2SUGP2
chr139990337799903484+intron-Distal4.8289114.82271HepG2SUGP2
chr139985796099857964+intron-Distal8.35862400.00000K562LARP7
chr139990013399900204+intron-Distal5.224576.57566K562PTBP1
chr139991265499912758+intron-Distal5.4106611.33240HepG2SUGP2
chr13100018121100018189+intron-Distal3.563215.98773K562KHSRP
chr139985796499857986+intron-Distal8.50277400.00000K562LARP7
chr139998916699989268+intron-Distal5.7500325.14094HepG2PCBP2
chr139990370999903788+intron-Distal3.464554.32634HepG2PTBP1
chr139989696599897039+intron-Distal,intron-Proximal3.977584.10688K562KHSRP
chr139986153299861574+intron-Distal3.154353.69184HepG2SUGP2
chr139985929699859382+intron-Distal3.588737.51551HepG2SUGP2
chr13100013089100013158+intron-Distal4.196983.96879HepG2MATR3
chr139990140499901495+intron-Distal4.328938.88051HepG2PCBP2
chr139985797999858062+intron-Distal3.570637.70603K562DGCR8
chr139997417799974295+intron-Distal3.636143.06150K562KHSRP
chr139985902599859099+intron-Distal3.349576.31916HepG2SUGP2
chr139990338699903433+intron-Distal4.167983.89080K562EXOSC5
chr139985808599858099+intron-Distal8.05290400.00000K562LARP7
chr139992594699925999+intron-Distal5.201118.59719HepG2HNRNPM
chr139991678499916838+intron-Distal3.122294.89395HepG2SUGP2
chr139990013399900215+intron-Distal4.531485.51760K562MATR3
chr139993133499931450+intron-Distal5.340597.79427HepG2PTBP1
chr139991097899911057+intron-Distal3.869005.75173HepG2QKI
chr139993133499931384+intron-Distal3.054714.39142HepG2PCBP2
chr139990350199903554+intron-Distal4.238364.31871HepG2HNRNPM
chr139990933399909395+intron-Distal4.9896420.46182HepG2PCBP2
chr139990013299900208+intron-Distal4.640753.96879HepG2MATR3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for UBAC2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for UBAC2 is not available on ENCORE database.

  • 75 RBPs can affect the levels of UBAC2.  








The Knockdown/knockout RNA-Seq assay for UBAC2 is not available on ENCORE database.





75 RBPs can affect the gene expression of UBAC2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
UBAC2ENSG00000134882.11687.18970906.24660-0.399203.030901.91440HepG2AATF
UBAC2ENSG00000134882.111896.076202411.55860-0.346902.202601.72140HepG2AKAP1
UBAC2ENSG00000134882.11750.75550572.446600.391102.554001.97580HepG2BOP1
UBAC2ENSG00000134882.111170.34520958.168800.288502.225001.52940HepG2CALR
UBAC2ENSG00000134882.11550.704401354.16310-1.2981017.3480015.11390HepG2CCAR1
UBAC2ENSG00000134882.112636.703001895.719800.475904.739303.74230HepG2CIRBP
UBAC2ENSG00000134882.11789.20070525.514100.586604.881803.99050HepG2CPSF6
UBAC2ENSG00000134882.111927.245201567.820300.297704.727803.79880HepG2DAZAP1
UBAC2ENSG00000134882.111245.78350999.915500.317102.304301.67770HepG2DDX21
UBAC2ENSG00000134882.11742.417301984.47590-1.4185025.2831023.69390HepG2DDX6
UBAC2ENSG00000134882.111303.451601096.867200.248802.365601.73190HepG2DKC1
UBAC2ENSG00000134882.11688.81360920.74030-0.418702.346901.33390HepG2AGO1
UBAC2ENSG00000134882.111146.135101907.63080-0.735008.834207.81340HepG2EIF2S1
UBAC2ENSG00000134882.11701.56070983.76140-0.487705.037703.48590HepG2EIF2S2
UBAC2ENSG00000134882.111154.989002052.62850-0.829607.891206.75970HepG2EIF4B
UBAC2ENSG00000134882.111061.151301546.81640-0.543709.279207.91760HepG2EIF4G1
UBAC2ENSG00000134882.11971.282801309.74810-0.431303.116602.30460HepG2FIP1L1
UBAC2ENSG00000134882.111069.959101376.82940-0.363803.230002.38510HepG2FUBP3
UBAC2ENSG00000134882.111478.279402127.13310-0.525005.113804.19350HepG2FXR1
UBAC2ENSG00000134882.111165.849201973.15540-0.759108.930107.77040HepG2G3BP1
UBAC2ENSG00000134882.111679.765502094.85210-0.318602.297901.48910HepG2G3BP2
UBAC2ENSG00000134882.11625.923901015.14630-0.697607.222005.56520HepG2GNB2L1
UBAC2ENSG00000134882.11695.295701152.91100-0.729605.069903.04550HepG2GTF2F1
UBAC2ENSG00000134882.111479.830101998.16780-0.433204.115003.27740HepG2HNRNPK
UBAC2ENSG00000134882.11819.75980568.443800.528103.574802.86950HepG2HNRNPLL
UBAC2ENSG00000134882.11793.832001089.33600-0.456506.509905.61280HepG2HNRNPU
UBAC2ENSG00000134882.11840.352601423.20380-0.760107.162905.23200HepG2HSPD1
UBAC2ENSG00000134882.111117.565401882.31370-0.752102.750801.77150HepG2IGF2BP3
UBAC2ENSG00000134882.111460.276202017.38290-0.466203.120902.04710HepG2KHSRP
UBAC2ENSG00000134882.111736.249802127.87630-0.293401.857401.31550HepG2MAGOH
UBAC2ENSG00000134882.111633.731102139.76340-0.389302.712502.08710HepG2MATR3
UBAC2ENSG00000134882.111401.869302190.14860-0.643706.917505.93670HepG2NCBP2
UBAC2ENSG00000134882.11662.23840504.079900.393602.300201.61610HepG2NSUN2
UBAC2ENSG00000134882.111336.289401939.65560-0.5376011.3521010.25840HepG2PCBP1
UBAC2ENSG00000134882.11453.35250673.57640-0.571205.636803.90380HepG2PKM
UBAC2ENSG00000134882.111325.90160932.212400.508108.173006.93660HepG2PRPF4
UBAC2ENSG00000134882.11534.48430700.06280-0.389302.205601.48220HepG2PRPF8
UBAC2ENSG00000134882.111275.406301973.61520-0.6299014.4003013.34310HepG2PTBP1
UBAC2ENSG00000134882.111895.778601574.266300.268002.533501.89120HepG2PUM2
UBAC2ENSG00000134882.111598.368601167.772300.452708.128907.16740HepG2PUS1
UBAC2ENSG00000134882.111636.955002137.59530-0.385005.093204.28520HepG2QKI
UBAC2ENSG00000134882.11874.282801210.94660-0.470005.446604.29100HepG2RBM15
UBAC2ENSG00000134882.111256.219001939.95930-0.626909.688108.48260HepG2RBM25
UBAC2ENSG00000134882.111311.068802196.49150-0.7445020.1749018.97250HepG2NELFE
UBAC2ENSG00000134882.111414.404002045.64760-0.5324011.1771010.06530HepG2RECQL
UBAC2ENSG00000134882.111490.060701229.724600.276901.935701.35190HepG2RPLP0
UBAC2ENSG00000134882.11682.840101106.16380-0.695907.948306.63790HepG2RPS2
UBAC2ENSG00000134882.111362.55260970.116600.490007.684906.69120HepG2SAFB2
UBAC2ENSG00000134882.111014.21020562.610700.8500010.645409.34500HepG2SF3B1
UBAC2ENSG00000134882.111599.431802054.89020-0.361505.674404.87890HepG2SF3B4
UBAC2ENSG00000134882.111126.56100626.016100.847606.311205.11970HepG2SNRNP70
UBAC2ENSG00000134882.11713.412001802.25450-1.3370055.8234054.31760HepG2SRFBP1
UBAC2ENSG00000134882.111045.043502144.81890-1.0373038.1661036.85620HepG2SRSF1
UBAC2ENSG00000134882.11402.68180605.47440-0.588403.560702.41290HepG2SRSF3
UBAC2ENSG00000134882.111433.601901744.88850-0.283503.846603.21750HepG2SRSF9
UBAC2ENSG00000134882.111203.886101666.46350-0.469108.940207.92980HepG2SUCLG1
UBAC2ENSG00000134882.111662.863201927.73130-0.213201.988701.50020HepG2TAF15
UBAC2ENSG00000134882.11796.30760554.223700.522804.122603.25950HepG2TARDBP
UBAC2ENSG00000134882.111465.682901771.44500-0.273402.469801.67730HepG2TIA1
UBAC2ENSG00000134882.11409.298001058.58730-1.3709032.6790031.30420HepG2TIAL1
UBAC2ENSG00000134882.111312.926101067.949500.297803.431202.81840HepG2TRIM56
UBAC2ENSG00000134882.111441.620201139.781500.338804.546703.68740HepG2UPF1
UBAC2ENSG00000134882.11773.277301100.41340-0.509007.189506.30010HepG2UTP3
UBAC2ENSG00000134882.11704.45210919.96850-0.385104.550903.72420HepG2ZC3H8
UBAC2ENSG00000134882.11832.110901168.87480-0.490304.583703.86290K562AQR
UBAC2ENSG00000134882.11262.37740459.58960-0.808707.124005.23290K562CCAR1
UBAC2ENSG00000134882.11543.90340727.42550-0.419403.826302.21720K562DDX6
UBAC2ENSG00000134882.11473.15630633.11720-0.420202.518701.65030K562EFTUD2
UBAC2ENSG00000134882.11447.09930654.30290-0.549405.278103.38630K562EWSR1
UBAC2ENSG00000134882.11286.55920419.86450-0.551103.049402.08430K562FTO
UBAC2ENSG00000134882.11423.54790735.93810-0.797109.089708.05950K562HNRNPC
UBAC2ENSG00000134882.11870.159101061.26130-0.286402.440501.60100K562HNRNPU
UBAC2ENSG00000134882.111264.872801545.42500-0.289002.352701.31570K562MSI2
UBAC2ENSG00000134882.11922.38530603.004900.613102.343201.44680K562PABPN1
UBAC2ENSG00000134882.11627.57620959.58420-0.612605.249004.09970K562PCBP3
UBAC2ENSG00000134882.11545.53780736.03030-0.432103.590702.67200K562POLR2G
UBAC2ENSG00000134882.11435.45120616.09430-0.500603.126002.32780K562PRPF8
UBAC2ENSG00000134882.11942.74840551.384300.773702.589101.44110K562SF1
UBAC2ENSG00000134882.11548.11460766.48610-0.483804.294503.41880K562SRSF1
UBAC2ENSG00000134882.11374.38320634.67010-0.761506.572205.07630K562TIAL1
UBAC2ENSG00000134882.11632.66700827.39990-0.387103.062702.14360K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for UBAC2 is not available on ENCORE database.





7 RBPs can affect the splicing of UBAC2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEUBAC2ENSG00000134882.11chr13+999702759997032399966350999664749999257399992819-0.082000.006870.09406excludedK562SF3B4
SEUBAC2ENSG00000134882.11chr13+1000200401000201609999257399992819100037481100038688-0.052000.001430.03585excludedHepG2HNRNPK
SEUBAC2ENSG00000134882.11chr13+10001062210001067799992573999928191000200401000201600.069000.001700.02206includedHepG2U2AF2
SEUBAC2ENSG00000134882.11chr13+9985368299853821998531409985319399890680998908080.079000.000060.00115includedK562AQR
SEUBAC2ENSG00000134882.11chr13+998836879988376799853145998531939989068099890808-0.074000.000150.04059excludedK562SBDS
SEUBAC2ENSG00000134882.11chr13+9998139599981454999702759997032399992573999928190.057000.000640.01782includedHepG2SRSF1
SEUBAC2ENSG00000134882.11chr13+9988368799883767998531459985319399890680998908080.276000.000000.00000includedK562HNRNPC
MXEUBAC2ENSG00000134882.11chr13+999926889999281910002004010002016099970275999703231000374811000376480.070000.001220.031611includedHepG2HNRNPK

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for UBAC2 is not avaliable on ENCORE database.