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LARP7
eCLIP
in K562
Experiment Information
Sequencing Information
File Information
Data Submission
Experiment Information
Replicate Information
QC Stats
Experiment Information (Status:
Released
)
243
243-control
Exp_UID
243
243
RBPARK_Exp_name
ENCODE_ACCESSION
ENCSR456KXI
ENCSR863ZGZ
ENCODE_alias
gene-yeo:243
gene-yeo:243-control
RBP
LARP7
LARP7
Cell_Line
K562
K562
Batch
Exp_type
eCLIP
control
ENCODE_Antibody_ID
ENCAB568DRS
ENCAB568DRS
Antibody
A303-723A
A303-723A
Lot_num
1
1
crosslinking_method
ultraviolet irradiation
ultraviolet irradiation
queried_RNP_size_range
175-300
175-300
Self_consistency_hg38
rescue_GRCh38
Status
Released
Released
Project
ENCODE3
ENCODE3
ID
20
57
Replicate Information
Rep_UID
243_01
243_02
243_INPUT
Exp UID
243
243
243
Replicate_type
rep1
rep2
control
ENCODE_ACCESSION
ENCLB186JKI
ENCLB069IAV
ENCLB418DVH
ENCODE_alias
gene-yeo:243_01
gene-yeo:243_02
gene-yeo:243_INPUT
Biosample Name
K562_110714
K562_020415
K562_110714
Biosample_ENCODE_Accession
ENCBS150ILK
ENCBS445ZHJ
ENCBS150ILK
Biosample_ENCODE_Alias
gene-yeo:K562_110714
gene-yeo:K562_020415
gene-yeo:K562_110714
Cell_Line
K562
K562
K562
Culture_Start_Date
2014-10-03
2014-01-02
2014-10-03
Culture_End_Date
2014-11-07
2015-02-04
2014-11-07
Passage
5
4
5
QC Stats
Experiment QC
243
243-control
Self_consistency_hg38
rescue_GRCh38
Replicate QC
Rep_UID
243_01
243_02
243_INPUT
eCT
Usable_reads
Entropy_hg38
Library-Prep
Sequencing
Library-Prep Information
Rep_UID
243_01
243_02
243_INPUT
library_size_selection_method
agarose gel extraction
agarose gel extraction
agarose gel extraction
strand_specificity
reverse
reverse
reverse
inline_barcode_1
A01
C01
none
inline_barcode_2
B06
D08fixed
none
i5_barcode
505
505
506
i7_barcode
705
705
706
Sequencing Information
Rep_UID
243_01
243_02
243_INPUT
seq_read_type
paired-ended
paired-ended
paired-ended
read_length
50
50
50
machine
flowcell
lane
File Information
GRCh38
file_name
Sample ID
file_format
output_type
assay_type
assembly
genome_annotation
Note
GRCh38/243.01v02.IDR.out.0102merged.bed.blacklist_removed.bed.narrowPeak.encode.bed.gz
243
final_peaks
peaks
eCLIP
GRCh38
hg19
file_name
Sample ID
file_format
output_type
assay_type
assembly
genome_annotation
Note
243.01v02.IDR.out.0102merged.bed.blacklist_removed.bed.narrowPeak.encode.bed.gz
243
final_peaks
peaks
eCLIP
hg19
Data Submission Information
No DCC registered objects are available for eCLIP experiment (Exp_UID=243)
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