ASB1

General Information

Gene Name       : ASB1
Gene ID             : ENSG00000065802.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ASB1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ASB1ENSG00000065802.115.9911.848.91ENCSR000AEF
HepG2ASB1ENSG00000065802.1162.7931.9447.37ENCSR985KAT
K562ASB1ENSG00000065802.1125.2218.5021.86ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ASB1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ASB1 RNA is bound by 28 proteins.  







eCLIP assay for ASB1 is not avaliable on ENCORE database.





28 proteins are bound to ASB1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2239356725239356876+3'-UTR,intron-Distal3.803976.67888HepG2EXOSC5
chr2239353367239353399+3'-UTR,CDS,intron-Proximal4.009929.59600K562AQR
chr2239360254239360306+3'-UTR,intron-Distal4.327478.45083HepG2HNRNPM
chr2239355023239355062+3'-UTR,CDS,intron-Proximal4.325423.45275HepG2LARP4
chr2239352937239353021+3'-UTR,CDS,intron-Proximal4.4166415.24119K562SF3B4
chr2239360748239360857+3'-UTR3.443805.63012HepG2LSM11
chr2239352962239353017+3'-UTR,CDS,intron-Proximal4.060864.49024K562AQR
chr2239359278239359331+3'-UTR,intron-Distal4.151347.94355HepG2HNRNPM
chr2239359922239359957+3'-UTR,intron-Distal5.002177.87558HepG2HNRNPM
chr2239356927239357060+3'-UTR,intron-Distal3.371626.65474K562CSTF2T
chr2239360352239360404+3'-UTR,intron-Proximal4.331504.80438HepG2KHSRP
chr2239359748239359808+3'-UTR,intron-Distal5.171718.06678K562TARDBP
chr2239360715239360868+3'-UTR3.403558.30530HepG2CSTF2
chr2239353065239353150+3'-UTR,CDS4.144084.15208K562RBM15
chr2239360777239360850+3'-UTR4.052933.28485K562CPSF6
chr2239355368239355445+3'-UTR,intron-Distal,intron-Proximal3.258624.00685K562TIA1
chr2239356230239356293+3'-UTR,intron-Distal4.160923.93054HepG2LIN28B
chr2239352929239353006+3'-UTR,CDS,intron-Proximal4.726465.32775HepG2SF3B4
chr2239355149239355245+3'-UTR3.379098.06746HepG2PPIG
chr2239353305239353369+3'-UTR,CDS,intron-Proximal3.302113.36945K562ZNF622
chr2239360361239360434+3'-UTR,intron-Proximal4.366075.02888K562KHSRP
chr2239353318239353432+3'-UTR,CDS,intron-Proximal5.440999.40852HepG2PRPF8
chr2239355269239355321+3'-UTR,intron-Proximal3.305323.61259K562ZNF622
chr2239354999239355084+3'-UTR,CDS,intron-Proximal3.823764.16174HepG2PRPF8
chr2239360025239360095+3'-UTR,intron-Distal3.055294.74233K562TARDBP
chr2239352919239352999+3'-UTR,CDS,intron-Proximal4.764576.03362HepG2AQR
chr2239356799239356992+3'-UTR,intron-Distal4.491414.65580K562GTF2F1
chr2239356881239356964+3'-UTR,intron-Distal3.304664.48738K562UPF1
chr2239354984239355079+3'-UTR,CDS,intron-Proximal4.0128510.58560K562AQR
chr2239354983239355060+3'-UTR,CDS,intron-Proximal3.975049.69329K562BUD13
chr2239360145239360209+3'-UTR,intron-Distal3.455194.23271HepG2HNRNPM
chr2239353317239353373+3'-UTR,CDS,intron-Proximal3.966168.40792HepG2PPIG
chr2239355395239355501+3'-UTR,intron-Distal,intron-Proximal3.205333.25653K562CSTF2T
chr2239359705239359748+3'-UTR,intron-Distal4.316464.92524K562TARDBP
chr2239355285239355332+3'-UTR,intron-Proximal4.502193.81597K562RBM15
chr2239360250239360346+3'-UTR,intron-Distal,intron-Proximal3.515995.56048K562KHSRP
chr2239353320239353366+3'-UTR,CDS3.355414.27261HepG2GRWD1
chr2239344423239344509+5'-UTR,CDS,intron-Distal3.319346.88650HepG2GRWD1
chr2239344566239344652+5'-UTR,CDS,intron-Distal3.498115.35682HepG2GRWD1
chr2239335660239335761+5'-UTR,CDS,intron-Distal,intron-Proximal3.8684719.97724HepG2DDX3X
chr2239335618239335706+5'-UTR,intron-Distal3.487834.51896HepG2XPO5
chr2239335648239335734+5'-UTR,CDS,intron-Distal3.907798.71205HepG2NCBP2
chr2239344325239344413+CDS,intron-Distal,intron-Proximal3.116875.66581HepG2BUD13
chr2239335736239335846+CDS,intron-Distal,intron-Proximal4.4711614.59055HepG2PRPF8
chr2239342136239342204+CDS,intron-Distal,intron-Proximal5.564207.02785HepG2SF3A3
chr2239342236239342335+CDS,intron-Distal3.193364.89070K562UCHL5
chr2239342326239342385+CDS,intron-Distal,intron-Proximal3.247765.90285HepG2PRPF8
chr2239344348239344426+CDS,intron-Distal,intron-Proximal3.108488.97576HepG2PPIG
chr2239342134239342224+CDS,intron-Distal,intron-Proximal5.282898.74981HepG2SF3B4
chr2239348087239348142+intron-Distal4.811786.96728HepG2HNRNPM
chr2239340563239340610+intron-Distal4.553546.05753HepG2SUGP2
chr2239340354239340433+intron-Distal3.193908.50128HepG2SUGP2
chr2239348239239348300+intron-Distal3.525975.06177HepG2SUGP2
chr2239347946239348035+intron-Distal3.386173.20028K562TARDBP
chr2239352618239352671+intron-Distal4.233663.60235HepG2HNRNPM
chr2239339804239339842+intron-Distal4.123654.10336HepG2SUGP2
chr2239339942239339984+intron-Distal3.545984.33009HepG2SUGP2
chr2239342142239342193+intron-Distal,intron-Proximal4.969438.05832K562SF3B4
chr2239335774239335838+intron-Distal,intron-Proximal4.4336816.30425HepG2EFTUD2
chr2239339273239339334+intron-Distal3.748177.27760HepG2SUGP2
chr2239339535239339566+intron-Distal4.299465.04879HepG2SUGP2
chr2239347967239348021+intron-Distal4.931397.51573HepG2HNRNPM
chr2239336608239336664+intron-Distal3.207253.59523HepG2SUGP2
chr2239340800239340852+intron-Distal4.686936.84124HepG2SUGP2
chr2239338865239338935+intron-Distal3.664737.98306HepG2SUGP2
chr2239348021239348084+intron-Distal3.850897.24726HepG2HNRNPM
chr2239335921239335978+intron-Distal3.760664.23256HepG2EFTUD2
chr2239335760239335826+intron-Distal,intron-Proximal4.353745.89850HepG2AQR
chr2239347934239348034+intron-Distal3.165385.91066HepG2SUGP2
chr2239348348239348407+intron-Distal3.154353.69184HepG2SUGP2
chr2239335838239335901+intron-Distal,intron-Proximal4.9954010.88777HepG2EFTUD2
chr2239348089239348178+intron-Distal3.510453.59301K562HNRNPM
chr2239348023239348089+intron-Distal4.676016.87194K562HNRNPM
chr2239340159239340227+intron-Distal4.028696.51675HepG2SUGP2
chr2239347826239347946+intron-Distal3.601624.17049K562TARDBP
chr2239353374239353426+intron-Proximal4.546484.28841HepG2BUD13
chr2239353399239353433+intron-Proximal5.0135810.60410K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ASB1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ASB1 is not available on ENCORE database.

  • 83 RBPs can affect the levels of ASB1.  








The Knockdown/knockout RNA-Seq assay for ASB1 is not available on ENCORE database.





83 RBPs can affect the gene expression of ASB1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ASB1ENSG00000065802.71439.750601871.94800-0.378702.967901.98980HepG2ABCF1
ASB1ENSG00000065802.71550.271601921.05030-0.309404.643003.89390HepG2ACO1
ASB1ENSG00000065802.71743.763902885.51940-0.726608.057007.20040HepG2AKAP1
ASB1ENSG00000065802.71594.564801930.06890-0.275503.426602.58410HepG2AKAP8L
ASB1ENSG00000065802.71368.808402387.49420-0.8026011.146709.65220HepG2ASCC1
ASB1ENSG00000065802.72860.586202486.714900.202002.275601.64210HepG2AUH
ASB1ENSG00000065802.71419.791901045.385900.441504.013703.30770HepG2BOP1
ASB1ENSG00000065802.71298.065601814.36500-0.483103.304002.23050HepG2CCAR1
ASB1ENSG00000065802.71685.100502268.29380-0.428803.862202.95670HepG2CIRBP
ASB1ENSG00000065802.7656.63520877.17590-0.417803.212602.05860HepG2CSTF2
ASB1ENSG00000065802.71095.499701416.48680-0.370703.154602.43400HepG2DDX21
ASB1ENSG00000065802.71626.817102764.04320-0.7647010.186109.05200HepG2DDX3X
ASB1ENSG00000065802.71819.296001396.432500.381502.297501.58700HepG2DDX55
ASB1ENSG00000065802.71794.796302374.52580-0.403802.849602.22340HepG2DDX6
ASB1ENSG00000065802.71504.731401159.614900.375803.339102.26740HepG2DHX30
ASB1ENSG00000065802.71370.028701837.92240-0.423906.921905.94230HepG2DKC1
ASB1ENSG00000065802.71490.800001202.297100.310203.352402.58350HepG2DNAJC21
ASB1ENSG00000065802.7857.993401459.91910-0.766909.443707.86660HepG2EEF2
ASB1ENSG00000065802.7869.610701419.72110-0.7072011.076908.95590HepG2EIF2S2
ASB1ENSG00000065802.71855.435002456.04780-0.404602.378201.73870HepG2EIF4B
ASB1ENSG00000065802.71311.231601621.31490-0.306202.419601.39780HepG2ESF1
ASB1ENSG00000065802.71527.885501890.13160-0.307002.052601.38420HepG2FIP1L1
ASB1ENSG00000065802.72104.079401560.736600.430904.778803.76140HepG2FUBP3
ASB1ENSG00000065802.72035.905902545.21650-0.322102.345201.70620HepG2FXR1
ASB1ENSG00000065802.7812.040301055.14390-0.377802.864401.95070HepG2GEMIN5
ASB1ENSG00000065802.71135.823501535.79490-0.435203.572002.40680HepG2GNB2L1
ASB1ENSG00000065802.7825.624801087.77350-0.397802.576001.95530HepG2GPKOW
ASB1ENSG00000065802.7772.843501213.81550-0.651307.588006.59700HepG2HNRNPA1
ASB1ENSG00000065802.72325.664002021.105600.202402.137901.30530HepG2HNRNPA2B1
ASB1ENSG00000065802.71800.477101334.487300.432007.366206.26730HepG2HNRNPF
ASB1ENSG00000065802.71015.388701303.86970-0.360803.441402.38870HepG2HNRNPM
ASB1ENSG00000065802.71100.967601341.21910-0.284803.079202.44230HepG2HNRNPU
ASB1ENSG00000065802.71605.688101314.095000.289002.718702.00130HepG2IGF2BP1
ASB1ENSG00000065802.71162.102702252.28310-0.954704.135902.93670HepG2IGF2BP3
ASB1ENSG00000065802.71254.227301801.21950-0.522203.935202.46620HepG2KHDRBS1
ASB1ENSG00000065802.71397.053801756.07560-0.330005.462804.04540HepG2KIF1C
ASB1ENSG00000065802.72083.356902546.10610-0.289401.926001.37300HepG2MAGOH
ASB1ENSG00000065802.71390.494802560.31960-0.8807011.6591010.42850HepG2MATR3
ASB1ENSG00000065802.72041.152902620.59960-0.360502.604601.98870HepG2NCBP2
ASB1ENSG00000065802.71453.57660920.541300.659007.771606.56170HepG2NSUN2
ASB1ENSG00000065802.71631.912602333.67750-0.516004.889603.94070HepG2PABPC4
ASB1ENSG00000065802.71108.830201327.57700-0.259802.593001.76980HepG2PARN
ASB1ENSG00000065802.7859.346101077.04160-0.325802.061801.36030HepG2PRPF8
ASB1ENSG00000065802.71428.217902209.79410-0.6297019.6649018.37580HepG2PUM1
ASB1ENSG00000065802.71576.486202208.16270-0.486106.997605.94990HepG2PUM2
ASB1ENSG00000065802.71974.583002460.43630-0.317403.270502.59950HepG2QKI
ASB1ENSG00000065802.71255.303901814.28090-0.531405.565304.14440HepG2RBM27
ASB1ENSG00000065802.71544.807902528.43610-0.7108019.2899018.11280HepG2NELFE
ASB1ENSG00000065802.71994.710302355.02710-0.239602.809902.18880HepG2RECQL
ASB1ENSG00000065802.71984.891601437.480300.465405.152904.25910HepG2RPLP0
ASB1ENSG00000065802.7879.195601153.18740-0.391403.511302.82780HepG2RPS19
ASB1ENSG00000065802.7799.584801065.39810-0.414102.732201.94970HepG2RRP9
ASB1ENSG00000065802.71788.812301194.414800.5826013.9522012.67080HepG2SAFB2
ASB1ENSG00000065802.71410.150601027.446300.456704.174603.32440HepG2SF3B1
ASB1ENSG00000065802.72266.089301996.037700.183002.342101.68830HepG2SLBP
ASB1ENSG00000065802.73297.010702695.291000.290604.962404.34630HepG2SRFBP1
ASB1ENSG00000065802.71476.209102468.90410-0.7420022.6955021.62220HepG2SRSF1
ASB1ENSG00000065802.71589.263402055.36220-0.371005.644304.79660HepG2SRSF5
ASB1ENSG00000065802.71670.840201311.069000.349705.063204.16640HepG2SRSF7
ASB1ENSG00000065802.71973.503802340.09260-0.245803.339002.78720HepG2SSB
ASB1ENSG00000065802.72071.110302337.48450-0.174601.930701.39360HepG2SUCLG1
ASB1ENSG00000065802.71551.527402219.32570-0.516409.012108.09440HepG2TAF15
ASB1ENSG00000065802.71363.365902118.76160-0.636002.897401.80460HepG2TBRG4
ASB1ENSG00000065802.71526.378701303.244100.227901.796101.37520HepG2TIAL1
ASB1ENSG00000065802.71550.714401314.895100.237902.536701.99220HepG2TRIM56
ASB1ENSG00000065802.71602.625401983.62680-0.307703.903102.68000HepG2UTP18
ASB1ENSG00000065802.71347.943401863.21980-0.467008.897107.92300HepG2UTP3
ASB1ENSG00000065802.71096.376101506.25130-0.458202.650701.61850HepG2XRCC6
ASB1ENSG00000065802.71438.821901114.866900.367905.652004.74440HepG2ZC3H8
ASB1ENSG00000065802.71342.834202122.49550-0.6605021.4125020.24380HepG2ZNF622
ASB1ENSG00000065802.7552.32190783.71060-0.504804.078702.61310K562AARS
ASB1ENSG00000065802.71602.265101264.576200.341404.632803.93180K562AGGF1
ASB1ENSG00000065802.71692.819201315.858400.363303.355802.63530K562AKAP8L
ASB1ENSG00000065802.7484.09060642.29080-0.407902.549501.54600K562CCAR1
ASB1ENSG00000065802.7668.28700846.02880-0.340202.471701.47960K562CSTF2
ASB1ENSG00000065802.7817.346901012.68940-0.309202.280701.33990K562DDX3X
ASB1ENSG00000065802.7707.739901316.52470-0.8954020.1854018.50730K562EIF2S2
ASB1ENSG00000065802.7543.07530744.45650-0.455002.948601.77750K562FKBP4
ASB1ENSG00000065802.7459.12780622.58910-0.439402.593301.71150K562FTO
ASB1ENSG00000065802.7778.214001100.31110-0.499706.399105.53490K562FXR1
ASB1ENSG00000065802.71193.099101754.39550-0.556306.977205.76860K562GRSF1
ASB1ENSG00000065802.71168.495101527.98340-0.387004.709003.53690K562HNRNPU
ASB1ENSG00000065802.7908.641301197.88980-0.398703.214802.36100K562HSPD1
ASB1ENSG00000065802.71721.530701396.421200.301902.428401.66110K562KIF1C
ASB1ENSG00000065802.7531.80330672.72310-0.339102.187301.40780K562METAP2
ASB1ENSG00000065802.71204.632801381.85160-0.198002.151901.48560K562NSUN2
ASB1ENSG00000065802.7707.26060927.04980-0.390402.768202.01940K562PRPF8
ASB1ENSG00000065802.71764.883302367.23660-0.423605.564404.00720K562PUM1
ASB1ENSG00000065802.71783.738002319.38060-0.378805.416804.05320K562PUM2
ASB1ENSG00000065802.71697.523601271.487200.416805.572304.75600K562RBM15
ASB1ENSG00000065802.71004.85830765.524300.392403.738602.73980K562SF3B4
ASB1ENSG00000065802.7604.71190877.32380-0.536905.736704.54730K562SYNCRIP
ASB1ENSG00000065802.71288.13560984.846900.387203.015102.27620K562TARDBP
ASB1ENSG00000065802.71182.721701465.20470-0.309003.965103.11820K562UPF1
ASB1ENSG00000065802.71026.037401253.73230-0.289102.268801.47600K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ASB1 is not available on ENCORE database.





13 RBPs can affect the splicing of ASB1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEASB1ENSG00000065802.7chr2+239344351239344654239342194239342336239352982239353368-0.279000.003480.09352excludedK562PRPF8
SEASB1ENSG00000065802.7chr2+239344351239344654239342194239342336239352982239353368-0.125000.000380.00915excludedHepG2U2AF1
SEASB1ENSG00000065802.7chr2+239344351239344654239342194239342336239352982239353368-0.170000.000010.00051excludedHepG2HNRNPK
SEASB1ENSG00000065802.7chr2+2393443512393446542393421942393423362393529822393533680.075000.003310.03809includedHepG2U2AF2
SEASB1ENSG00000065802.7chr2+239344351239344504239342189239342336239352982239353368-0.351000.000050.04909excludedHepG2LARP7
SEASB1ENSG00000065802.7chr2+239344351239344654239342194239342336239352982239353368-0.546000.000000.00001excludedK562FXR1
SEASB1ENSG00000065802.7chr2+239344351239344654239342194239342336239352982239353368-0.242000.000050.01716excludedK562APOBEC3C
SEASB1ENSG00000065802.7chr2+239344351239344654239342194239342336239352982239353368-0.081000.001100.09208excludedHepG2LARP4
SEASB1ENSG00000065802.7chr2+2393443512393446542393421942393423362393529822393533680.182000.000080.00978includedHepG2HNRNPL
SEASB1ENSG00000065802.7chr2+239344351239344654239342194239342336239352982239353368-0.304000.000000.00001excludedHepG2SRSF1
SEASB1ENSG00000065802.7chr2+239344351239344654239342194239342336239352982239353368-0.173000.000000.00012excludedHepG2SF3A3
SEASB1ENSG00000065802.7chr2+239344351239344654239342194239342336239352982239353368-0.364000.000560.02559excludedK562PTBP1
A3SSASB1ENSG00000065802.7chr2+2393421732393423362393421942393423362393356442393357600.132000.002030.01303longerK562AQR
A5SSASB1ENSG00000065802.7chr2+239344351239344654239344351239344504239352982239353368-0.127000.000050.01327shorterHepG2PTBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ASB1 is not avaliable on ENCORE database.