ATP5SL

General Information

Gene Name       : ATP5SL
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ATP5SL)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ATP5SL is not avaliable on ENCORE database.



Proteins bound to RNA
  • ATP5SL RNA is bound by 11 proteins.  







eCLIP assay for ATP5SL is not avaliable on ENCORE database.





11 proteins are bound to ATP5SL RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr194193777141937822-3'-UTR,CDS,intron-Distal,intron-Proximal3.722194.14074K562UPF1
chr194193788241937983-3'-UTR,intron-Distal,intron-Proximal4.587516.23478HepG2AKAP1
chr194193765541937734-3'-UTR,intron-Distal,intron-Proximal3.229063.85853K562IGF2BP2
chr194193878141938852-3'-UTR,intron-Distal,intron-Proximal3.227457.20426HepG2HNRNPL
chr194193725341937311-3'-UTR,intron-Distal3.887624.50550K562UPF1
chr194193746841937535-3'-UTR,intron-Distal4.760434.89596HepG2LIN28B
chr194193767141937764-3'-UTR,intron-Distal,intron-Proximal3.733054.66086HepG2AKAP1
chr194193789141937987-3'-UTR,intron-Distal,intron-Proximal4.776497.10674HepG2UPF1
chr194193764341937689-3'-UTR,intron-Distal,intron-Proximal5.010187.21253K562UPF1
chr194193903341939087-3'-UTR,intron-Distal,intron-Proximal3.375884.70733K562HNRNPL
chr194193731841937486-3'-UTR,intron-Distal4.274704.08466HepG2IGF2BP1
chr194193743041937493-3'-UTR,intron-Distal3.149843.67576K562IGF2BP2
chr194193941741939505-3'-UTR,CDS,intron-Distal,intron-Proximal3.705183.86355HepG2PPIG
chr194193746441937543-3'-UTR,intron-Distal3.829585.38431K562LIN28B
chr194193751641937622-3'-UTR,intron-Distal,intron-Proximal4.8410317.48010K562UPF1
chr194193731441937430-3'-UTR,intron-Distal3.488744.30970K562IGF2BP2
chr194193876041938852-3'-UTR,intron-Distal,intron-Proximal4.475928.00296K562HNRNPL
chr194193876341938858-3'-UTR,intron-Distal,intron-Proximal5.1067739.87328K562AGGF1
chr194193743841937514-3'-UTR,intron-Distal4.543805.64948HepG2UPF1
chr194193767441937810-3'-UTR,CDS,intron-Distal,intron-Proximal5.041747.10674HepG2UPF1
chr194193788341937977-3'-UTR,intron-Distal,intron-Proximal3.737707.91779K562UPF1
chr194193743241937516-3'-UTR,intron-Distal4.6638910.92855K562UPF1
chr194194422141944320-5'-UTR,CDS,intron-Distal,intron-Proximal4.9698223.23118K562DDX3X
chr194193826241938388-CDS,intron-Distal,intron-Proximal6.0133959.17026K562AGGF1
chr194193828641938386-CDS,intron-Distal,intron-Proximal4.9599518.03656K562HNRNPL
chr194193826941938322-CDS,intron-Distal,intron-Proximal4.691164.03748HepG2AGGF1
chr194193832141938440-intron-Distal,intron-Proximal4.3002919.70350HepG2HNRNPL
chr194193862441938680-intron-Distal,intron-Proximal5.8202423.48460K562AGGF1
chr194193851441938604-intron-Distal3.779397.96317HepG2HNRNPL
chr194193851641938562-intron-Distal7.1319631.15461K562AGGF1
chr194193846441938516-intron-Distal6.4227035.09274K562AGGF1
chr194193843441938464-intron-Distal5.5735429.27542K562AGGF1
chr194193834141938508-intron-Distal,intron-Proximal3.063744.32209HepG2GTF2F1
chr194193843741938524-intron-Distal5.342419.75957K562HNRNPL
chr194193851541938598-intron-Distal4.423294.23722HepG2AGGF1
chr194194472641944814-intron-Distal4.552994.43116HepG2RBFOX2
chr194193844041938514-intron-Distal3.777609.51524HepG2HNRNPL
chr194193860441938682-intron-Distal,intron-Proximal3.103745.46556HepG2HNRNPL
chr194193856241938608-intron-Distal5.8095721.78446K562AGGF1
chr194193838841938434-intron-Distal,intron-Proximal5.5788942.21010K562AGGF1
chr194193838641938437-intron-Distal,intron-Proximal3.334395.57675K562HNRNPL
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ATP5SL is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ATP5SL is not available on ENCORE database.

  • 86 RBPs can affect the levels of ATP5SL.  








The Knockdown/knockout RNA-Seq assay for ATP5SL is not available on ENCORE database.





86 RBPs can affect the gene expression of ATP5SL :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ATP5SLENSG00000105341.141047.64430732.205400.516708.035807.10900HepG2ACO1
ATP5SLENSG00000105341.14831.701801159.58840-0.479502.221901.51410HepG2ASCC1
ATP5SLENSG00000105341.141334.611501116.595100.257202.657501.98340HepG2AUH
ATP5SLENSG00000105341.14723.828801090.92820-0.591806.107105.25760HepG2BOP1
ATP5SLENSG00000105341.14867.31810731.998400.244602.149301.55230HepG2CKAP4
ATP5SLENSG00000105341.14588.43300748.96830-0.348002.914102.25730HepG2CELF1
ATP5SLENSG00000105341.14964.70530805.326500.260402.447201.74420HepG2DAZAP1
ATP5SLENSG00000105341.14840.28460677.163100.311303.227302.33130HepG2DDX19B
ATP5SLENSG00000105341.14684.83340505.631400.437603.563602.25050HepG2DDX1
ATP5SLENSG00000105341.14868.25830495.787800.8083013.2210011.77470HepG2DNAJC21
ATP5SLENSG00000105341.14665.30490491.469400.436804.841604.01770HepG2DNAJC2
ATP5SLENSG00000105341.14315.35010604.27470-0.938309.823207.76490HepG2EFTUD2
ATP5SLENSG00000105341.14677.653101192.99090-0.816003.990203.17130HepG2EIF4B
ATP5SLENSG00000105341.14784.624401281.99720-0.7083013.9150012.73220HepG2ETF1
ATP5SLENSG00000105341.14922.41240715.453000.366502.860802.01170HepG2EWSR1
ATP5SLENSG00000105341.14859.287701070.84250-0.317502.392301.66000HepG2FUBP3
ATP5SLENSG00000105341.14874.098801217.84650-0.478502.156001.37540HepG2G3BP2
ATP5SLENSG00000105341.14434.389001135.33520-1.3861021.5041019.90410HepG2GPKOW
ATP5SLENSG00000105341.14574.78170740.11730-0.364703.150302.16080HepG2HNRNPA2B1
ATP5SLENSG00000105341.141029.47630871.264500.240602.248401.59710HepG2HNRNPF
ATP5SLENSG00000105341.141035.06240733.591300.496607.678606.60510HepG2HNRNPL
ATP5SLENSG00000105341.14763.154701083.46990-0.505604.155003.39860HepG2HNRNPLL
ATP5SLENSG00000105341.14658.55860553.093500.251701.836601.33330HepG2HNRNPU
ATP5SLENSG00000105341.14868.034401165.41810-0.425001.876001.30990HepG2IGF2BP2
ATP5SLENSG00000105341.14689.61780564.963300.287502.418301.72750HepG2ILF2
ATP5SLENSG00000105341.14887.029501236.96040-0.479702.039201.47220HepG2MAGOH
ATP5SLENSG00000105341.14742.468601243.76150-0.744303.972303.22880HepG2MATR3
ATP5SLENSG00000105341.14836.83360546.282600.615203.121701.58190HepG2NOLC1
ATP5SLENSG00000105341.14862.35810568.337400.601402.321901.33030HepG2NONO
ATP5SLENSG00000105341.14663.895801133.19760-0.771404.248203.36470HepG2PABPC4
ATP5SLENSG00000105341.14858.351401121.93140-0.386304.669003.91510HepG2PCBP1
ATP5SLENSG00000105341.14649.93760493.311700.397703.364802.55850HepG2PPIL4
ATP5SLENSG00000105341.14727.161101141.62750-0.6507011.0592010.10690HepG2PTBP1
ATP5SLENSG00000105341.14836.727001236.36740-0.563307.509306.55540HepG2QKI
ATP5SLENSG00000105341.141488.965401071.513100.474606.729506.00610HepG2RBM22
ATP5SLENSG00000105341.14829.365601122.09930-0.436104.103603.29580HepG2RBM25
ATP5SLENSG00000105341.14850.17600655.294800.375502.301301.40520HepG2RBM27
ATP5SLENSG00000105341.14806.605301270.50490-0.6555011.4735010.51660HepG2NELFE
ATP5SLENSG00000105341.14884.632701183.33330-0.419705.278504.46100HepG2RECQL
ATP5SLENSG00000105341.14331.02810471.79630-0.511202.768801.98200HepG2RRP9
ATP5SLENSG00000105341.14883.14990492.542500.8423016.7545015.36540HepG2SAFB2
ATP5SLENSG00000105341.141523.471201061.152500.521603.564802.79620HepG2SF3A3
ATP5SLENSG00000105341.14858.742301188.54510-0.468906.413905.57480HepG2SF3B4
ATP5SLENSG00000105341.14889.86710730.920700.283802.712402.01620HepG2SLBP
ATP5SLENSG00000105341.14741.23880574.368200.367903.819103.08360HepG2SMN1
ATP5SLENSG00000105341.14838.36790558.329400.586403.202002.16420HepG2SMNDC1
ATP5SLENSG00000105341.14840.093801193.26320-0.506302.742101.96460HepG2SNRNP70
ATP5SLENSG00000105341.14961.855301240.59870-0.367104.437003.87270HepG2SRSF1
ATP5SLENSG00000105341.14952.86100752.654400.340203.421102.73770HepG2SRSF5
ATP5SLENSG00000105341.14543.448601009.30590-0.8931019.5921018.36660HepG2SRSF9
ATP5SLENSG00000105341.14834.977901050.77350-0.331603.616003.04640HepG2SSB
ATP5SLENSG00000105341.141005.55580855.976100.232301.964001.42320HepG2SUCLG1
ATP5SLENSG00000105341.14650.934901115.13980-0.7766013.2311012.14160HepG2TAF15
ATP5SLENSG00000105341.14768.501101024.61770-0.415003.967802.97380HepG2TIA1
ATP5SLENSG00000105341.14747.67870537.359400.476404.411303.81040HepG2TIAL1
ATP5SLENSG00000105341.14820.22040542.242700.597008.521807.61790HepG2TRIM56
ATP5SLENSG00000105341.141356.37890729.457400.894802.644701.67930HepG2U2AF2
ATP5SLENSG00000105341.14191.85790363.70730-0.922706.612105.42580HepG2UCHL5
ATP5SLENSG00000105341.14801.24650941.08350-0.232101.929401.32880HepG2UPF1
ATP5SLENSG00000105341.141252.22980908.573800.462707.006606.12690HepG2UTP3
ATP5SLENSG00000105341.14841.30650606.171300.472802.498401.80690HepG2XRN2
ATP5SLENSG00000105341.14376.55150754.03830-1.0018020.0386018.52650HepG2ZC3H8
ATP5SLENSG00000105341.141327.961901035.006800.359504.348003.70340HepG2ZNF622
ATP5SLENSG00000105341.141389.61490967.725700.521908.791407.85600K562AGGF1
ATP5SLENSG00000105341.141332.054301006.967900.403503.672902.91630K562AKAP8L
ATP5SLENSG00000105341.141286.231601056.561900.283702.728301.82170K562ATP5C1
ATP5SLENSG00000105341.141213.235001737.85670-0.518507.576705.98830K562CELF1
ATP5SLENSG00000105341.14783.83900606.399100.370202.923601.85050K562DDX3X
ATP5SLENSG00000105341.141046.718201242.12800-0.246902.240501.64420K562DDX47
ATP5SLENSG00000105341.141348.617501083.535600.315603.465002.46950K562DKC1
ATP5SLENSG00000105341.14423.46830322.125900.394502.189401.47550K562EIF3G
ATP5SLENSG00000105341.14955.69090633.559100.593006.311705.08070K562EIF4A3
ATP5SLENSG00000105341.14720.58610553.046300.381703.164701.76890K562EWSR1
ATP5SLENSG00000105341.141099.24390839.635600.388603.041502.15060K562FIP1L1
ATP5SLENSG00000105341.14141.90080322.50350-1.184405.283504.23530K562G3BP2
ATP5SLENSG00000105341.14588.58750846.29500-0.523904.352803.36300K562GPKOW
ATP5SLENSG00000105341.141470.229001207.801300.283602.059801.40130K562GRSF1
ATP5SLENSG00000105341.14273.28220487.39000-0.834706.696104.71280K562HNRNPK
ATP5SLENSG00000105341.14920.62710690.631400.414602.631701.72640K562HNRNPM
ATP5SLENSG00000105341.14746.420901010.78890-0.437404.729603.55470K562HNRNPU
ATP5SLENSG00000105341.141337.348101068.625600.323502.727101.90810K562KIF1C
ATP5SLENSG00000105341.14733.71270512.910200.516404.557303.47120K562MAGOH
ATP5SLENSG00000105341.141322.168701022.953100.370103.019001.88480K562MAK16
ATP5SLENSG00000105341.141535.381401197.133300.358903.248902.25040K562MBNL1
ATP5SLENSG00000105341.14720.21600510.938200.495203.331601.88610K562NONO
ATP5SLENSG00000105341.14795.934201172.55780-0.558902.055701.33910K562PCBP3
ATP5SLENSG00000105341.14609.33410899.33790-0.561602.540901.77640K562POLR2G
ATP5SLENSG00000105341.141372.50070953.180000.525905.289404.09460K562PPIG
ATP5SLENSG00000105341.14718.49300504.510900.510003.604802.74810K562PRPF8
ATP5SLENSG00000105341.14625.04910498.336100.326802.155401.55750K562PTBP1
ATP5SLENSG00000105341.141563.98650998.597200.647207.908907.03780K562PUS1
ATP5SLENSG00000105341.141438.19400973.014600.563608.655207.63230K562RBM15
ATP5SLENSG00000105341.14604.84430477.759500.340202.018701.30480K562RBM22
ATP5SLENSG00000105341.14794.66830620.982500.355702.240201.33850K562SRFBP1
ATP5SLENSG00000105341.14793.01590488.553100.698707.990706.79570K562SRSF1
ATP5SLENSG00000105341.14695.45790494.409800.492203.615202.80240K562TARDBP
ATP5SLENSG00000105341.14626.47950476.924000.393402.695701.88930K562TIA1
ATP5SLENSG00000105341.14963.12390733.645000.392502.861001.89700K562TRIM56
ATP5SLENSG00000105341.14388.67690516.96230-0.411502.251401.34160K562UCHL5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ATP5SL is not available on ENCORE database.





23 RBPs can affect the splicing of ATP5SL :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEATP5SLENSG00000105341.14chr19-419422964194237741939344419395784194412241944319-0.133000.006580.09425excludedK562SRSF1
SEATP5SLENSG00000105341.14chr19-419422964194237741939344419395784194412241944319-0.237000.000010.00054excludedK562SF3B4
SEATP5SLENSG00000105341.14chr19-419422964194237741939531419395784194412241944319-0.161000.000280.01376excludedK562PRPF8
SEATP5SLENSG00000105341.14chr19-419391764193933941937243419383134193944141939578-0.205000.000020.00265excludedHepG2RBM22
SEATP5SLENSG00000105341.14chr19-419422964194237741939531419395784194412241944319-0.215000.000010.00047excludedHepG2U2AF1
SEATP5SLENSG00000105341.14chr19-419391764193933941937243419383134193944141939578-0.357000.000000.00000excludedHepG2U2AF1
SEATP5SLENSG00000105341.14chr19-419422964194237741939344419395784194412241944319-0.087000.000490.00766excludedHepG2U2AF2
SEATP5SLENSG00000105341.14chr19-419391764193933941937243419383134193944141939578-0.099000.001040.01460excludedHepG2U2AF2
SEATP5SLENSG00000105341.14chr19-419422964194237741939344419395784194412241944319-0.129000.002730.02836excludedK562AQR
SEATP5SLENSG00000105341.14chr19-419391764193933941937243419383134193944141939578-0.339000.000020.00178excludedK562FXR1
SEATP5SLENSG00000105341.14chr19-419422964194237741939344419395784194412241944319-0.183000.000090.01215excludedK562SUPV3L1
SEATP5SLENSG00000105341.14chr19-419422964194237741939531419395784194412241944319-0.205000.000170.01328excludedK562EFTUD2
SEATP5SLENSG00000105341.14chr19-4193917641939339419372434193831341939441419395780.220000.000050.05236includedK562EXOSC5
SEATP5SLENSG00000105341.14chr19-419422964194237741939344419395784194412241944319-0.221000.000070.00232excludedK562U2AF1
SEATP5SLENSG00000105341.14chr19-4193917641939339419372434193831341939441419395780.161000.000280.06023includedK562SBDS
SEATP5SLENSG00000105341.14chr19-419391764193933941937243419383134193944141939578-0.286000.000310.00986excludedHepG2SRSF1
SEATP5SLENSG00000105341.14chr19-419422824194237741939441419395784194412241944319-0.140000.004100.09091excludedHepG2SF3A3
SEATP5SLENSG00000105341.14chr19-419391764193933941937243419383134193944141939578-0.199000.000010.01249excludedK562LARP7
SEATP5SLENSG00000105341.14chr19-4193917641939339419372434193831341939441419395780.388000.000000.00096includedHepG2NOL12
SEATP5SLENSG00000105341.14chr19-4193917641939339419372434193831341939441419395780.264000.000260.05448includedHepG2DDX55
SEATP5SLENSG00000105341.14chr19-419391764193933941937243419383134193944141939578-0.274000.001070.06341excludedHepG2SRSF9
SEATP5SLENSG00000105341.14chr19-419391764193933941937243419383134193944141939578-0.170000.000070.00203excludedK562HNRNPC
RIATP5SLENSG00000105341.14chr19-419372234193933941937223419383134193917641939339-0.282000.000220.01880excludedHepG2SUPV3L1
RIATP5SLENSG00000105341.14chr19-419372234193933941937223419383134193917641939339-0.284000.000640.07890excludedHepG2NOL12
RIATP5SLENSG00000105341.14chr19-419372234193933941937223419383134193917641939339-0.268000.000310.04000excludedHepG2DDX55
RIATP5SLENSG00000105341.14chr19-4193722341939339419372234193831341939176419393390.221000.000150.00533includedHepG2SRSF1
RIATP5SLENSG00000105341.14chr19-419372234193933941937223419383134193917641939339-0.288000.001030.04959excludedHepG2HNRNPC
RIATP5SLENSG00000105341.14chr19-419372234193933941937223419383134193917641939339-0.290000.001280.02478excludedHepG2TIAL1
RIATP5SLENSG00000105341.14chr19-419372234193933941937223419383134193917641939339-0.354000.000030.00451excludedHepG2HNRNPU
RIATP5SLENSG00000105341.14chr19-4193722341939339419372234193831341939176419393390.213000.000550.01161includedHepG2SRSF9
RIATP5SLENSG00000105341.14chr19-419372234193933941937223419383134193917641939339-0.165000.000020.00133excludedHepG2PTBP1
MXEATP5SLENSG00000105341.14chr19-41942296419423774194412241944319419394414193957841945786419458130.269000.000000.000001includedHepG2XRN2
MXEATP5SLENSG00000105341.14chr19-41942333419423774194412241944319419394414193957841945786419458150.055000.003540.073971includedHepG2XRN2
MXEATP5SLENSG00000105341.14chr19-41942296419423774194412241944319419394414193957841945786419458130.233000.000070.018881includedK562GEMIN5

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ATP5SL is not avaliable on ENCORE database.