TSR1

General Information

Gene Name       : TSR1
Gene ID             : ENSG00000167721.10
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: TSR1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TSR1ENSG00000167721.1035.6634.6835.17ENCSR000AEF
HepG2TSR1ENSG00000167721.1033.9341.4937.71ENCSR985KAT
K562TSR1ENSG00000167721.1041.9740.5641.27ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TSR1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TSR1 RNA is bound by 35 proteins.  







eCLIP assay for TSR1 is not avaliable on ENCORE database.





35 proteins are bound to TSR1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1722388042238834-3'-UTR,CDS,intron-Distal,intron-Proximal3.171633.94979HepG2BCLAF1
chr1722267232226771-3'-UTR,intron-Distal4.117073.89948K562YBX3
chr1722389052238999-3'-UTR,CDS,intron-Distal3.275556.81934HepG2GRWD1
chr1722388082238863-3'-UTR,CDS,intron-Distal,intron-Proximal3.012323.46619K562GRWD1
chr1722286342228705-3'-UTR,CDS,intron-Distal4.355414.91614HepG2GRWD1
chr1722389052238966-3'-UTR,CDS,intron-Distal4.004593.48187K562RBM15
chr1722388962238956-3'-UTR,CDS,intron-Distal3.735138.13606K562UCHL5
chr1722389082238957-3'-UTR,CDS,intron-Distal3.904923.11282HepG2G3BP1
chr1722386672238689-3'-UTR,CDS,intron-Distal,intron-Proximal3.203703.94979HepG2BCLAF1
chr1722386662238688-3'-UTR,CDS,intron-Distal3.627124.68902HepG2PPIG
chr1722269382226970-3'-UTR,intron-Distal4.2202712.55317K562YBX3
chr1722389072239022-3'-UTR,CDS,intron-Distal3.5699910.62736K562ZNF622
chr1722386662238702-3'-UTR,CDS,intron-Distal,intron-Proximal3.920717.38843HepG2BUD13
chr1722269702226979-3'-UTR,intron-Distal4.0511010.82616K562YBX3
chr1722273532227407-3'-UTR,intron-Distal4.219037.11997HepG2SUB1
chr1722389812239043-CDS,intron-Distal,intron-Proximal6.3235914.50093K562AQR
chr1722389712239027-CDS,intron-Distal,intron-Proximal3.581479.97237HepG2PPIG
chr1722362912236403-CDS,intron-Distal3.4823610.63268K562UCHL5
chr1722362532236290-CDS,intron-Distal,intron-Proximal3.564396.14048K562ZNF622
chr1722394102239501-CDS,intron-Distal,intron-Proximal3.942946.32943HepG2SF3B4
chr1722394092239434-CDS,intron-Distal5.2481213.00561K562AQR
chr1722342512234318-CDS,intron-Distal,intron-Proximal3.264104.45064HepG2GRWD1
chr1722354622235549-CDS,intron-Distal,intron-Proximal4.241773.47885K562LIN28B
chr1722389142239021-CDS,intron-Distal3.535708.99805HepG2BCLAF1
chr1722278082227909-CDS,intron-Distal,intron-Proximal5.351558.90499HepG2AQR
chr1722327302232796-CDS,intron-Distal,intron-Proximal4.421106.48405K562AQR
chr1722389922239030-CDS,intron-Distal,intron-Proximal3.623513.02919K562GRWD1
chr1722337232233810-CDS,intron-Distal,intron-Proximal4.439615.42080K562EFTUD2
chr1722389562238993-CDS,intron-Distal3.854604.74268K562UCHL5
chr1722393302239404-CDS,intron-Distal,intron-Proximal3.377397.83156K562ZNF622
chr1722356282235654-CDS,intron-Distal,intron-Proximal3.223223.24162HepG2G3BP1
chr1722356262235654-CDS,intron-Distal,intron-Proximal4.443474.28193HepG2AQR
chr1722393972239502-CDS,intron-Distal,intron-Proximal4.9337413.10719HepG2PRPF8
chr1722389852239037-CDS,intron-Distal,intron-Proximal3.088438.02118K562BUD13
chr1722355772235618-CDS,intron-Distal3.865923.11282HepG2G3BP1
chr1722325992232656-CDS,intron-Distal,intron-Proximal4.272484.75655HepG2PRPF8
chr1722337372233817-CDS,intron-Distal,intron-Proximal3.682236.70109K562PRPF8
chr1722389682239038-CDS,intron-Distal,intron-Proximal4.650494.19541K562SMNDC1
chr1722277532227833-CDS,intron-Distal,intron-Proximal5.052196.01989HepG2PRPF8
chr1722362542236279-CDS,intron-Distal,intron-Proximal4.073443.11282HepG2G3BP1
chr1722356142235653-CDS,intron-Distal4.168016.61895K562ZNF622
chr1722342492234308-CDS,intron-Distal,intron-Proximal3.450305.71803K562UCHL5
chr1722338752233920-CDS,intron-Distal,intron-Proximal3.149355.75243K562ZNF622
chr1722396242239681-CDS,intron-Distal3.647217.89340K562DDX3X
chr1722356242235650-CDS,intron-Distal4.885595.37137HepG2BCLAF1
chr1722342392234300-CDS,intron-Distal,intron-Proximal4.213804.60638K562GRWD1
chr1722396222239628-CDS,intron-Distal4.331784.42734K562UCHL5
chr1722278092227926-CDS,intron-Distal,intron-Proximal3.645057.05055K562PRPF8
chr1722338952233919-CDS,intron-Distal3.113885.41277K562UCHL5
chr1722342402234249-CDS,intron-Distal,intron-Proximal3.051115.41277K562UCHL5
chr1722355432235654-CDS,intron-Distal,intron-Proximal3.6776216.17904K562UCHL5
chr1722396122239664-CDS,intron-Distal3.438424.02291HepG2GRWD1
chr1722327292232787-CDS,intron-Distal,intron-Proximal3.594597.17324K562BUD13
chr1722354632235527-CDS,intron-Distal3.313526.32494K562UCHL5
chr1722278642227955-CDS,intron-Distal,intron-Proximal3.865835.84589K562EFTUD2
chr1722393242239459-CDS,intron-Distal,intron-Proximal3.0749911.96964HepG2AQR
chr1722393482239395-CDS,intron-Distal3.759226.79537K562AQR
chr1722395702239650-CDS,intron-Distal6.1100913.18741HepG2PRPF8
chr1722368512236972-CDS,intron-Distal3.054889.32148K562ZNF622
chr1722362532236286-CDS,intron-Distal,intron-Proximal4.859824.34038HepG2BCLAF1
chr1722362982236404-CDS,intron-Distal3.580343.77614HepG2G3BP1
chr1722369912237057-CDS,intron-Distal,intron-Proximal3.921349.96904K562SF3B4
chr1722342062234315-CDS,intron-Distal,intron-Proximal3.355214.26355K562XRCC6
chr1722369202236966-CDS,intron-Distal4.204307.09561HepG2BCLAF1
chr1722278052227863-CDS,intron-Distal3.139075.40132HepG2BCLAF1
chr1722362532236291-CDS,intron-Distal,intron-Proximal3.2437610.40226K562UCHL5
chr1722394172239467-CDS,intron-Distal,intron-Proximal3.033164.56061K562BUD13
chr1722324462232458-intron-Distal4.4836183.48987K562SMNDC1
chr1722324582232484-intron-Distal4.4811872.39967K562SMNDC1
chr1722324202232505-intron-Distal4.7467343.04758HepG2NIP7
chr1722392772239327-intron-Distal,intron-Proximal3.334663.76553K562PRPF8
chr1722335752233651-intron-Distal5.9247924.40645K562ZC3H8
chr1722324222232487-intron-Distal3.5202962.39506K562HNRNPUL1
chr1722335782233644-intron-Distal3.058003.70230K562NCBP2
chr1722324402232477-intron-Distal5.6663117.90739K562NIPBL
chr1722325932232617-intron-Distal,intron-Proximal5.208596.44303K562AQR
chr1722394342239457-intron-Distal,intron-Proximal4.6021612.08233K562AQR
chr1722335772233644-intron-Distal4.04628400.00000HepG2LARP7
chr1722324202232422-intron-Distal3.0207325.28446K562HNRNPUL1
chr1722335922233603-intron-Distal6.56303400.00000HepG2NOLC1
chr1722324592232488-intron-Distal3.3064714.86748K562ABCF1
chr1722335862233615-intron-Distal4.92961400.00000HepG2DKC1
chr1722324462232474-intron-Distal6.67886400.00000HepG2NOLC1
chr1722335902233635-intron-Distal3.6958068.17253K562PHF6
chr1722335742233644-intron-Distal4.1959326.47383K562UTP18
chr1722324202232428-intron-Distal7.05168400.00000HepG2NOLC1
chr1722335762233612-intron-Distal4.5704157.65008K562SF3B4
chr1722336122233644-intron-Distal4.8221555.45993K562SF3B4
chr1722335762233646-intron-Distal5.96925400.00000K562AATF
chr1722324202232440-intron-Distal4.49364400.00000K562SMNDC1
chr1722337462233762-intron-Distal,intron-Proximal5.395795.69951K562AQR
chr1722324192232485-intron-Distal4.6387667.87458K562SF3B4
chr1722337622233798-intron-Distal,intron-Proximal5.7108119.62251K562AQR
chr1722324352232446-intron-Distal6.49868400.00000HepG2NOLC1
chr1722395802239620-intron-Distal6.5536519.81373K562AQR
chr1722324202232490-intron-Distal4.21360400.00000K562PHF6
chr1722324582232485-intron-Distal4.58360400.00000HepG2DKC1
chr1722336132233641-intron-Distal4.81052400.00000K562SMNDC1
chr1722329882233088-intron-Distal4.702415.97091K562TARDBP
chr1722392872239331-intron-Distal,intron-Proximal3.133025.84601HepG2PRPF8
chr1722386912238717-intron-Distal,intron-Proximal4.384433.12843K562PRPF8
chr1722324192232458-intron-Distal4.10303400.00000HepG2DKC1
chr1722335762233662-intron-Distal4.8582133.14833HepG2NIP7
chr1722375952237670-intron-Distal,intron-Proximal3.562173.17610K562EFTUD2
chr1722335762233645-intron-Distal7.1378518.88441K562NIPBL
chr1722336152233634-intron-Distal5.70580400.00000HepG2DKC1
chr1722395382239580-intron-Distal5.8695511.25363K562AQR
chr1722335822233644-intron-Distal3.6912722.60613K562NOLC1
chr1722335762233613-intron-Distal5.03417400.00000K562SMNDC1
chr1722337982233809-intron-Distal,intron-Proximal4.4220211.31344K562AQR
chr1722392892239331-intron-Distal,intron-Proximal4.556758.30573K562AQR
chr1722335872233627-intron-Distal3.2016423.43261K562XRCC6
chr1722335842233591-intron-Distal7.43133400.00000HepG2NOLC1
chr1722395182239565-intron-Distal,intron-Proximal5.199008.04585HepG2PRPF8
chr1722324172232487-intron-Distal3.6399953.73772K562PTBP1
chr1722336042233634-intron-Distal6.69414400.00000HepG2NOLC1
chr1722324282232435-intron-Distal7.08096400.00000HepG2NOLC1
chr1722324462232483-intron-Distal3.1749619.05068K562NOLC1
chr1722395282239575-intron-Distal,intron-Proximal3.672655.03105K562BUD13
chr1722324382232474-intron-Distal3.8198621.41922K562UTP18
chr1722335762233645-intron-Distal3.6868420.62532HepG2NOL12
chr1722324342232477-intron-Distal5.68138400.00000K562AATF
chr1722335762233644-intron-Distal3.2434659.23501K562PTBP1
chr1722324202232484-intron-Distal3.3703620.96015K562DROSHA
chr1722336492233654-intron-Distal3.743303.62418K562PTBP1
chr1722337572233803-intron-Distal,intron-Proximal3.275873.91614K562BUD13
chr1722392162239301-intron-Distal,intron-Proximal4.094193.84437HepG2PRPF4
chr1722342012234239-intron-Distal,intron-Proximal3.892344.49024K562AQR
chr1722396202239624-intron-Distal6.0069813.28065K562AQR
chr1722324202232489-intron-Distal5.0239216.37857K562ZC3H8
chr1722386882238741-intron-Distal,intron-Proximal4.997353.92230K562EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TSR1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TSR1 is not available on ENCORE database.

  • 95 RBPs can affect the levels of TSR1.  








The Knockdown/knockout RNA-Seq assay for TSR1 is not available on ENCORE database.





95 RBPs can affect the gene expression of TSR1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TSR1ENSG00000167721.62078.874701642.331900.340005.650804.84380HepG2ACO1
TSR1ENSG00000167721.61179.168901524.50780-0.370602.890301.87200HepG2ADAR
TSR1ENSG00000167721.62792.250201865.213500.582005.428104.71230HepG2AKAP1
TSR1ENSG00000167721.6994.758801663.05130-0.741407.782206.36680HepG2BCLAF1
TSR1ENSG00000167721.61586.737102330.19650-0.554404.338703.10370HepG2CCAR1
TSR1ENSG00000167721.61083.656502039.96960-0.9126015.2008013.74930HepG2CPSF6
TSR1ENSG00000167721.62806.931302388.195400.233002.470201.85620HepG2CELF1
TSR1ENSG00000167721.62054.605402568.21820-0.321906.720305.63910HepG2DAZAP1
TSR1ENSG00000167721.61070.640701493.26750-0.480005.007304.12290HepG2DDX21
TSR1ENSG00000167721.61129.934101480.63160-0.390003.552302.44870HepG2DHX30
TSR1ENSG00000167721.6985.255201571.26630-0.6734014.4000013.10780HepG2DKC1
TSR1ENSG00000167721.6838.939601535.16020-0.8718020.4846018.76040HepG2DNAJC21
TSR1ENSG00000167721.61131.143301521.47920-0.427707.957906.92470HepG2DNAJC2
TSR1ENSG00000167721.61552.493502426.91130-0.644509.020307.58710HepG2EIF4G2
TSR1ENSG00000167721.62612.618603011.46340-0.205002.395001.82810HepG2ETF1
TSR1ENSG00000167721.61122.532701566.22700-0.480503.640302.19340HepG2FKBP4
TSR1ENSG00000167721.61223.83170934.067300.389703.291202.43860HepG2FUBP3
TSR1ENSG00000167721.6792.990602312.39980-1.5440032.9053030.98710HepG2GPKOW
TSR1ENSG00000167721.6860.409901549.86600-0.8490013.6992012.43410HepG2HNRNPA1
TSR1ENSG00000167721.61057.832101723.89790-0.7046010.022808.77330HepG2HNRNPC
TSR1ENSG00000167721.61224.871002204.53930-0.8478026.1520024.27300HepG2HNRNPF
TSR1ENSG00000167721.62226.294401545.253000.526705.958404.96370HepG2HNRNPK
TSR1ENSG00000167721.61677.740102339.54780-0.4797012.8571011.50140HepG2HNRNPL
TSR1ENSG00000167721.61034.540402206.77160-1.0929020.2719018.81240HepG2HNRNPLL
TSR1ENSG00000167721.61252.243701712.50360-0.451608.052007.05800HepG2HNRNPU
TSR1ENSG00000167721.61327.255202170.83970-0.7098013.5725012.09480HepG2IGF2BP1
TSR1ENSG00000167721.61313.108501749.27280-0.413808.252507.05230HepG2ILF2
TSR1ENSG00000167721.62553.023001654.947500.625306.330505.40680HepG2MATR3
TSR1ENSG00000167721.61242.524902250.76170-0.857107.763606.10940HepG2MTPAP
TSR1ENSG00000167721.61983.755302546.62270-0.360404.983903.96380HepG2NOL12
TSR1ENSG00000167721.61827.711601433.895700.350005.197004.40650HepG2PCBP1
TSR1ENSG00000167721.61082.351301527.42360-0.496907.532306.36020HepG2PPIL4
TSR1ENSG00000167721.6877.536001451.81300-0.726307.677806.41180HepG2PRPF8
TSR1ENSG00000167721.61474.452902430.88490-0.7213012.8900011.73110HepG2PUF60
TSR1ENSG00000167721.61977.644402578.56720-0.382805.217504.31020HepG2PUM2
TSR1ENSG00000167721.61365.367601672.82140-0.293003.945903.23520HepG2PUS1
TSR1ENSG00000167721.61181.208401434.10490-0.279902.106001.51180HepG2RBM25
TSR1ENSG00000167721.61322.062902374.86150-0.8451015.4857014.12320HepG2RPLP0
TSR1ENSG00000167721.61005.423701554.47670-0.628604.221903.06100HepG2RPS10
TSR1ENSG00000167721.61078.133601436.17330-0.413702.534201.77870HepG2RRP9
TSR1ENSG00000167721.61265.683401525.08460-0.269003.358002.66010HepG2SAFB2
TSR1ENSG00000167721.61544.155102184.23050-0.500305.665704.68520HepG2SF3B1
TSR1ENSG00000167721.61834.352302330.62470-0.345407.016705.98100HepG2SLBP
TSR1ENSG00000167721.61223.033501613.64830-0.399902.273701.41490HepG2SMNDC1
TSR1ENSG00000167721.61023.239902430.35290-1.2480014.8504013.05970HepG2SNRNP70
TSR1ENSG00000167721.62194.951202842.83530-0.373107.801507.07810HepG2SRFBP1
TSR1ENSG00000167721.62199.295101585.557600.472009.771809.00590HepG2SRSF1
TSR1ENSG00000167721.61604.195402350.34590-0.551004.598503.27690HepG2SRSF3
TSR1ENSG00000167721.62073.118602400.01930-0.211202.663902.04670HepG2SRSF5
TSR1ENSG00000167721.61113.819402165.89450-0.9594032.5883030.72660HepG2SRSF7
TSR1ENSG00000167721.61515.000301289.975100.231902.627202.08600HepG2SRSF9
TSR1ENSG00000167721.61535.241202468.19740-0.6850020.4032019.28990HepG2SSB
TSR1ENSG00000167721.6863.147901873.20140-1.1178016.1916014.79500HepG2SUPV3L1
TSR1ENSG00000167721.61726.564401425.288400.276602.905702.33250HepG2TAF15
TSR1ENSG00000167721.61257.840002151.09070-0.7741011.9275010.58330HepG2TARDBP
TSR1ENSG00000167721.6723.000601664.17280-1.2027032.8536031.47570HepG2TIAL1
TSR1ENSG00000167721.6949.272001640.51390-0.789309.865108.66660HepG2U2AF1
TSR1ENSG00000167721.6794.175302122.55880-1.418305.836104.35380HepG2U2AF2
TSR1ENSG00000167721.61313.678501666.91030-0.343605.134004.22870HepG2UPF1
TSR1ENSG00000167721.61232.580601715.51050-0.477002.563201.59940HepG2UPF2
TSR1ENSG00000167721.62338.871501609.341000.5392012.4005011.27180HepG2UTP3
TSR1ENSG00000167721.61177.893301843.95870-0.646606.635305.52870HepG2XRN2
TSR1ENSG00000167721.61127.319201629.35920-0.5314011.6778010.45720HepG2ZC3H8
TSR1ENSG00000167721.62096.018002711.13440-0.371205.750204.35090K562BCLAF1
TSR1ENSG00000167721.61847.397202586.39360-0.485405.140903.94100K562BOP1
TSR1ENSG00000167721.6982.339601317.37510-0.423403.582602.34950K562CCAR1
TSR1ENSG00000167721.62719.603504510.59600-0.729903.789502.51130K562CNOT7
TSR1ENSG00000167721.61721.945902750.10770-0.6754012.7193011.02590K562CPSF6
TSR1ENSG00000167721.62480.329102929.19670-0.240002.958501.70570K562DDX21
TSR1ENSG00000167721.61363.662001742.44560-0.353603.508302.31630K562DDX3X
TSR1ENSG00000167721.65926.886203819.433700.6338021.5016019.84950K562DDX47
TSR1ENSG00000167721.62775.874802308.279700.266002.966502.05450K562DKC1
TSR1ENSG00000167721.61736.795802456.09400-0.499903.948502.84370K562EFTUD2
TSR1ENSG00000167721.62247.284703689.39590-0.7152020.6542018.95470K562EIF2S2
TSR1ENSG00000167721.63023.826901929.703300.6479010.841209.25920K562EIF3G
TSR1ENSG00000167721.62413.979503410.08910-0.498406.296304.98370K562FIP1L1
TSR1ENSG00000167721.61702.034602798.11270-0.7172011.139309.36550K562FMR1
TSR1ENSG00000167721.61570.549202371.62830-0.594606.692405.20800K562FTO
TSR1ENSG00000167721.63014.403601893.121400.6710017.3202015.91860K562FXR1
TSR1ENSG00000167721.61538.470002625.69950-0.7712013.7183011.93110K562GPKOW
TSR1ENSG00000167721.63322.733104916.62820-0.565309.436808.01700K562GRSF1
TSR1ENSG00000167721.61367.257002122.75660-0.634706.160405.30440K562HNRNPC
TSR1ENSG00000167721.61337.253101895.28480-0.503104.134202.70700K562HNRNPF
TSR1ENSG00000167721.61932.994102449.64000-0.341703.445901.34310K562HNRNPH1
TSR1ENSG00000167721.63510.367002305.585900.606407.436205.32130K562HNRNPK
TSR1ENSG00000167721.62677.630103127.03720-0.223802.311901.49370K562HNRNPU
TSR1ENSG00000167721.63705.128704623.42320-0.319402.910502.09520K562HSPD1
TSR1ENSG00000167721.61548.943402241.95850-0.533504.040102.89350K562KRR1
TSR1ENSG00000167721.61747.212902562.96580-0.552807.765506.26300K562METAP2
TSR1ENSG00000167721.62272.158902960.40310-0.381707.525606.24980K562MTPAP
TSR1ENSG00000167721.62483.011703289.31900-0.4057012.5532011.12340K562NSUN2
TSR1ENSG00000167721.61252.931802414.73370-0.946602.861401.84890K562PABPN1
TSR1ENSG00000167721.61996.182702961.19250-0.568906.199204.95050K562PCBP3
TSR1ENSG00000167721.61761.486902271.35290-0.366804.099503.12130K562POLR2G
TSR1ENSG00000167721.63080.719403871.05730-0.329502.979202.12340K562PPIG
TSR1ENSG00000167721.63091.438502357.060900.391204.872904.01520K562PTBP1
TSR1ENSG00000167721.64597.466905928.42910-0.366803.222002.18610K562PUM2
TSR1ENSG00000167721.61370.799201735.94930-0.340702.729301.74530K562RCC2
TSR1ENSG00000167721.63025.373902434.875200.313202.258701.52390K562RPS19
TSR1ENSG00000167721.61696.326702497.04810-0.557805.493004.09000K562SF3B1
TSR1ENSG00000167721.61247.831601645.68070-0.399303.024001.94000K562SRFBP1
TSR1ENSG00000167721.61731.535602182.24320-0.333802.781001.72970K562SRSF5
TSR1ENSG00000167721.62006.059002614.07280-0.381906.201304.43780K562SRSF7
TSR1ENSG00000167721.61545.386602314.69300-0.582904.180902.91050K562SUPV3L1
TSR1ENSG00000167721.63181.905002278.202300.481907.644206.26950K562SYNCRIP
TSR1ENSG00000167721.61720.662302338.59940-0.442704.310803.42090K562TARDBP
TSR1ENSG00000167721.61796.890002255.83590-0.328203.340202.42970K562TIA1
TSR1ENSG00000167721.61185.826401830.59530-0.626404.940203.65620K562TIAL1
TSR1ENSG00000167721.61721.344802213.58020-0.362803.364202.13800K562TRA2A
TSR1ENSG00000167721.63257.543803979.97190-0.289003.300901.90500K562TROVE2
TSR1ENSG00000167721.61416.339101921.08690-0.439805.692104.53970K562U2AF2
TSR1ENSG00000167721.61491.510902449.51340-0.715705.585504.09090K562UCHL5
TSR1ENSG00000167721.62560.655003487.73110-0.4458010.862309.55570K562UPF1
TSR1ENSG00000167721.62084.493102984.34720-0.517707.706106.20350K562WDR3
TSR1ENSG00000167721.63519.290203103.334600.181402.368501.58080K562WDR43
TSR1ENSG00000167721.62946.335001922.710700.615703.098601.41060K562XRCC6
TSR1ENSG00000167721.61905.649502493.80970-0.388102.484501.35800K562XRN2
TSR1ENSG00000167721.63200.493604538.32070-0.503904.713403.54240K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TSR1 is not available on ENCORE database.





6 RBPs can affect the splicing of TSR1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETSR1ENSG00000167721.6chr17-223933022394342238804223902422396242239751-0.332000.000000.00000excludedHepG2U2AF1
SETSR1ENSG00000167721.6chr17-223263622327692228597222871422338082233919-0.072000.000100.00274excludedHepG2U2AF1
SETSR1ENSG00000167721.6chr17-223933022394342238804223902422396242239751-0.466000.000000.00000excludedHepG2U2AF2
SETSR1ENSG00000167721.6chr17-223933022394342238804223902422396242240801-0.131000.000000.00002excludedK562AQR
SETSR1ENSG00000167721.6chr17-223933022394342238804223902422396242239751-0.155000.000000.00032excludedK562SUPV3L1
SETSR1ENSG00000167721.6chr17-223933022394342238804223902422396242239751-0.363000.002810.04591excludedK562U2AF2
SETSR1ENSG00000167721.6chr17-223933022394342238804223902422396242239751-0.074000.000780.03106excludedK562HNRNPU
SETSR1ENSG00000167721.6chr17-223933022394342238804223902422396242239751-0.135000.002320.07386excludedHepG2HNRNPC
SETSR1ENSG00000167721.6chr17-223933022394342238804223902422396242239751-0.171000.000020.00080excludedK562HNRNPC
A3SSTSR1ENSG00000167721.6chr17-2232636223280622326362232769223380822339190.055000.000000.00001longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TSR1 is not avaliable on ENCORE database.