CPSF1

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CPSF1	ENSG00000071894.16	3.10	10.97	7.04	ENCSR000AEF
HepG2	CPSF1	ENSG00000071894.16	144.01	21.07	82.54	ENCSR985KAT
K562	CPSF1	ENSG00000071894.16	80.98	38.55	59.77	ENCSR000AEO

GeneName	Antibody_DCC_ID	Product_ID	Lot_ID	Phosphate	HepG2 Primary Validation	K562 Primary Validation	HepG2 Secondary Validation	K562 Secondary Validation
CPSF1	ENCAB113DER	A301-580A	2			Released, ENCODE4		BGKcLV44-7, Submitting, ENCORE2

GeneName	Cell_Line	Method	Sample_reps	Control_reps	KD%	Status	Project
CPSF1	K562	CRISPR	BGKcLV44-5,BGKcLV44-6	BGKcLV44-1,BGKcLV44-2	24.5,33.1	NotSatisfied	ENCORE2
CPSF1	K562	CRISPR	CPSF1-BGKcLV44-7,CPSF1-BGKcLV44-8	NT-BGKcLV44-1,NT-BGKcLV44-2	70.3,66.8	Sequenced	ENCORE2
CPSF1	HepG2	CRISPR	BGHcLV45-13,BGHcLV45-14	BGHcLV45-1,BGHcLV45-2	no band on the position,	NotSatisfied	ENCORE2

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CPSF1 is not avaliable on ENCORE database.

Proteins bound to RNA

CPSF1 RNA is bound by 40 proteins.

eCLIP assay for CPSF1 is not avaliable on ENCORE database.

40 proteins are bound to CPSF1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	145618516	145618578	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.11457	7.37218	K562	METAP2
chr8	145618491	145618526	-	3'-UTR,intron-Distal	3.62284	7.80648	K562	YBX3
chr8	145618454	145618523	-	3'-UTR,intron-Distal	3.76056	12.34851	K562	PUM2
chr8	145634549	145634582	-	5'-UTR,intron-Distal,intron-Proximal	3.69820	4.17016	K562	HNRNPM
chr8	145634546	145634582	-	5'-UTR,intron-Distal,intron-Proximal	3.94148	4.38588	HepG2	DDX3X
chr8	145634582	145634656	-	5'-UTR,intron-Distal,intron-Proximal	5.23774	4.51377	K562	HNRNPM
chr8	145619448	145619458	-	CDS,intron-Distal,intron-Proximal	5.07015	5.32242	HepG2	PABPN1
chr8	145623286	145623341	-	CDS,intron-Distal	3.58501	9.15420	K562	METAP2
chr8	145618907	145618964	-	CDS,intron-Distal,intron-Proximal	4.47205	8.22830	HepG2	PABPN1
chr8	145619347	145619456	-	CDS,intron-Distal,intron-Proximal	5.13191	20.55479	HepG2	EFTUD2
chr8	145624418	145624423	-	CDS,intron-Distal,intron-Proximal	4.62755	10.78364	HepG2	PPIG
chr8	145624526	145624561	-	CDS,intron-Distal,intron-Proximal	3.55063	4.90615	K562	FXR2
chr8	145620758	145620815	-	CDS,intron-Distal,intron-Proximal	6.08838	32.27116	HepG2	SF3A3
chr8	145619597	145619653	-	CDS,intron-Distal,intron-Proximal	3.77195	7.96522	HepG2	PABPN1
chr8	145624739	145624763	-	CDS,intron-Distal,intron-Proximal	3.77321	11.54327	HepG2	PPIG
chr8	145623332	145623396	-	CDS,intron-Distal,intron-Proximal	3.93842	13.63099	K562	RBFOX2
chr8	145623338	145623404	-	CDS,intron-Distal,intron-Proximal	3.69893	4.76791	K562	GTF2F1
chr8	145620391	145620394	-	CDS,intron-Distal,intron-Proximal	3.73732	7.89918	K562	DDX24
chr8	145619721	145619767	-	CDS,intron-Distal,intron-Proximal	3.82809	7.71672	HepG2	PABPN1
chr8	145620370	145620396	-	CDS,intron-Distal,intron-Proximal	3.90425	7.93421	K562	METAP2
chr8	145626064	145626098	-	CDS,intron-Distal,intron-Proximal	4.96848	11.68877	K562	METAP2
chr8	145623283	145623335	-	CDS,intron-Distal	3.84457	19.01295	K562	DDX24
chr8	145623784	145623814	-	CDS,intron-Distal,intron-Proximal	3.44878	14.72800	HepG2	PPIG
chr8	145621553	145621571	-	CDS,intron-Distal,intron-Proximal	4.10024	33.73410	HepG2	PRPF8
chr8	145619142	145619168	-	CDS,intron-Distal	4.95560	6.12579	HepG2	PABPN1
chr8	145621861	145621912	-	CDS,intron-Distal	4.41291	3.91585	HepG2	PRPF4
chr8	145619871	145619908	-	CDS,intron-Distal	3.14842	5.83563	K562	METAP2
chr8	145626645	145626678	-	CDS,intron-Distal	3.28285	7.92183	HepG2	BUD13
chr8	145623279	145623322	-	CDS,intron-Distal	3.77467	4.60670	K562	FXR2
chr8	145624007	145624026	-	CDS,intron-Distal	3.76451	6.45270	K562	METAP2
chr8	145620746	145620862	-	CDS,intron-Distal,intron-Proximal	4.76907	54.61708	K562	SF3B4
chr8	145620194	145620241	-	CDS,intron-Distal,intron-Proximal	3.79901	12.23507	HepG2	PRPF8
chr8	145623332	145623389	-	CDS,intron-Distal,intron-Proximal	3.29673	8.93979	K562	EFTUD2
chr8	145625409	145625463	-	CDS,intron-Distal,intron-Proximal	3.19819	6.02523	K562	METAP2
chr8	145626608	145626626	-	CDS,intron-Distal	5.04259	22.26185	HepG2	PPIG
chr8	145620001	145620070	-	CDS,intron-Distal,intron-Proximal	5.41724	8.88638	HepG2	AQR
chr8	145620176	145620236	-	CDS,intron-Distal,intron-Proximal	4.09401	27.57736	K562	DDX24
chr8	145621531	145621570	-	CDS,intron-Distal,intron-Proximal	4.20539	3.91585	HepG2	PRPF4
chr8	145624018	145624025	-	CDS,intron-Distal	4.33178	7.51551	K562	UCHL5
chr8	145623024	145623033	-	CDS,intron-Distal	3.82054	5.28224	K562	METAP2
chr8	145618959	145619004	-	CDS,intron-Distal,intron-Proximal	3.09401	3.61795	HepG2	SRSF1
chr8	145619331	145619341	-	CDS,intron-Distal,intron-Proximal	3.90682	5.29689	HepG2	PABPN1
chr8	145625651	145625667	-	CDS,intron-Distal,intron-Proximal	5.10773	15.45094	K562	DDX24
chr8	145622959	145623051	-	CDS,intron-Distal,intron-Proximal	5.09674	12.81619	K562	FMR1
chr8	145620155	145620233	-	CDS,intron-Distal,intron-Proximal	4.19036	13.83195	HepG2	GRWD1
chr8	145620437	145620481	-	CDS,intron-Distal,intron-Proximal	4.96928	21.49406	HepG2	PRPF8
chr8	145619870	145619874	-	CDS,intron-Distal	3.11917	9.92812	K562	YBX3
chr8	145619219	145619254	-	CDS,intron-Distal,intron-Proximal	4.20712	7.24138	K562	FXR2
chr8	145620664	145620737	-	CDS,intron-Distal,intron-Proximal	3.32186	6.64396	HepG2	PABPN1
chr8	145619005	145619077	-	CDS,intron-Distal,intron-Proximal	4.56155	14.32315	K562	EFTUD2
chr8	145619354	145619374	-	CDS,intron-Distal,intron-Proximal	4.29699	8.98140	K562	DDX24
chr8	145623340	145623401	-	CDS,intron-Distal,intron-Proximal	3.90521	20.37917	HepG2	PRPF8
chr8	145623285	145623337	-	CDS,intron-Distal	3.50121	10.72725	K562	BUD13
chr8	145626127	145626181	-	CDS,intron-Distal	3.53312	6.72681	K562	METAP2
chr8	145620370	145620409	-	CDS,intron-Distal,intron-Proximal	3.86208	5.88049	HepG2	EFTUD2
chr8	145625854	145625887	-	CDS,intron-Distal	4.05344	6.61245	K562	METAP2
chr8	145619725	145619744	-	CDS,intron-Distal,intron-Proximal	4.54905	6.01390	HepG2	GRWD1
chr8	145625010	145625044	-	CDS,intron-Distal	3.99240	14.44887	K562	DDX24
chr8	145622982	145623028	-	CDS,intron-Distal	5.70206	7.46420	K562	FXR2
chr8	145619720	145619767	-	CDS,intron-Distal,intron-Proximal	3.13611	5.13929	K562	RBM15
chr8	145621540	145621576	-	CDS,intron-Distal,intron-Proximal	3.45008	6.65904	HepG2	GRWD1
chr8	145620312	145620327	-	CDS,intron-Distal,intron-Proximal	4.36452	12.83490	HepG2	PPIG
chr8	145626444	145626469	-	CDS,intron-Distal,intron-Proximal	6.97044	31.78965	HepG2	PPIG
chr8	145619356	145619395	-	CDS,intron-Distal,intron-Proximal	3.75246	13.81099	HepG2	PRPF8
chr8	145619337	145619375	-	CDS,intron-Distal,intron-Proximal	3.47736	16.50987	HepG2	PPIG
chr8	145618691	145618805	-	CDS,intron-Distal,intron-Proximal	4.92006	14.53405	HepG2	PABPN1
chr8	145626317	145626336	-	CDS,intron-Distal,intron-Proximal	3.13404	3.07714	K562	YBX3
chr8	145619329	145619423	-	CDS,intron-Distal,intron-Proximal	4.58698	18.49466	K562	EFTUD2
chr8	145623914	145623934	-	CDS,intron-Distal,intron-Proximal	5.91508	19.39529	K562	DDX24
chr8	145623920	145623949	-	CDS,intron-Distal,intron-Proximal	3.67213	15.85106	HepG2	PPIG
chr8	145624404	145624428	-	CDS,intron-Distal,intron-Proximal	4.98196	10.22087	K562	DDX24
chr8	145620128	145620196	-	CDS,intron-Distal	3.62202	6.40705	K562	XRCC6
chr8	145620235	145620280	-	CDS,intron-Distal,intron-Proximal	3.13577	7.80135	HepG2	EFTUD2
chr8	145624168	145624209	-	CDS,intron-Distal,intron-Proximal	4.21973	9.44130	K562	METAP2
chr8	145621661	145621709	-	CDS,intron-Distal	3.25774	7.02421	K562	METAP2
chr8	145625000	145625022	-	CDS,intron-Distal	3.98921	6.03462	K562	METAP2
chr8	145620203	145620238	-	CDS,intron-Distal,intron-Proximal	3.00326	3.97716	HepG2	PABPN1
chr8	145620010	145620063	-	CDS,intron-Distal,intron-Proximal	4.40146	17.53614	HepG2	PRPF8
chr8	145623340	145623397	-	CDS,intron-Distal,intron-Proximal	3.67976	9.94956	HepG2	PRPF4
chr8	145623805	145623833	-	CDS,intron-Distal,intron-Proximal	4.96959	8.78094	HepG2	GRWD1
chr8	145624725	145624739	-	CDS,intron-Distal,intron-Proximal	3.37751	9.91328	HepG2	PPIG
chr8	145624678	145624725	-	CDS,intron-Distal,intron-Proximal	4.19275	14.18652	HepG2	PPIG
chr8	145624346	145624400	-	CDS,intron-Distal,intron-Proximal	4.46766	11.65463	K562	LIN28B
chr8	145626070	145626095	-	CDS,intron-Distal	3.88454	14.44887	K562	DDX24
chr8	145618976	145619018	-	CDS,intron-Distal,intron-Proximal	4.59505	10.43503	HepG2	EFTUD2
chr8	145624681	145624720	-	CDS,intron-Distal,intron-Proximal	5.17574	12.68425	HepG2	BUD13
chr8	145620480	145620489	-	CDS,intron-Distal,intron-Proximal	3.27681	5.00580	K562	METAP2
chr8	145624347	145624407	-	CDS,intron-Distal,intron-Proximal	4.24588	4.60263	HepG2	LIN28B
chr8	145620158	145620176	-	CDS,intron-Distal	4.61312	12.34598	K562	DDX24
chr8	145623763	145623826	-	CDS,intron-Distal,intron-Proximal	3.13743	5.78613	HepG2	SRSF1
chr8	145626449	145626465	-	CDS,intron-Distal,intron-Proximal	3.50306	4.71371	HepG2	GRWD1
chr8	145625053	145625093	-	CDS,intron-Distal,intron-Proximal	3.05108	5.44849	K562	METAP2
chr8	145625789	145625825	-	CDS,intron-Distal	4.46317	18.68388	K562	DDX24
chr8	145619395	145619459	-	CDS,intron-Distal,intron-Proximal	3.95814	19.48913	HepG2	PRPF8
chr8	145624357	145624381	-	CDS,intron-Distal,intron-Proximal	4.34935	4.78507	K562	FXR2
chr8	145623330	145623387	-	CDS,intron-Distal,intron-Proximal	4.30185	11.04858	HepG2	EFTUD2
chr8	145620651	145620679	-	CDS,intron-Distal,intron-Proximal	3.51652	13.56556	HepG2	PPIG
chr8	145626604	145626608	-	CDS,intron-Distal,intron-Proximal	6.42899	22.26099	HepG2	PPIG
chr8	145623338	145623403	-	CDS,intron-Distal,intron-Proximal	4.81596	11.15861	HepG2	FAM120A
chr8	145625203	145625244	-	CDS,intron-Distal,intron-Proximal	3.55506	17.65634	K562	DDX24
chr8	145619960	145619991	-	CDS,intron-Distal,intron-Proximal	3.20019	9.68110	HepG2	BUD13
chr8	145626414	145626444	-	CDS,intron-Distal,intron-Proximal	4.91334	20.73156	HepG2	PPIG
chr8	145620374	145620390	-	CDS,intron-Distal,intron-Proximal	3.44215	7.84823	HepG2	PPIG
chr8	145625871	145625885	-	CDS,intron-Distal	3.45126	11.37994	K562	DDX24
chr8	145625752	145625768	-	CDS,intron-Distal,intron-Proximal	6.35940	11.96394	K562	DDX24
chr8	145624173	145624214	-	CDS,intron-Distal	4.54128	16.62315	K562	DDX24
chr8	145620106	145620119	-	CDS,intron-Distal,intron-Proximal	3.20003	6.92518	HepG2	PPIG
chr8	145626185	145626210	-	CDS,intron-Distal	3.59176	7.65255	K562	YBX3
chr8	145623331	145623392	-	CDS,intron-Distal,intron-Proximal	3.00698	5.23946	K562	PRPF8
chr8	145623777	145623832	-	CDS,intron-Distal,intron-Proximal	5.63124	31.15633	K562	DDX24
chr8	145623814	145623830	-	CDS,intron-Distal,intron-Proximal	3.58029	14.45990	HepG2	PPIG
chr8	145634456	145634476	-	CDS,intron-Distal	3.19544	5.17928	K562	YBX3
chr8	145619549	145619601	-	CDS,intron-Distal,intron-Proximal	4.28436	11.17766	HepG2	PRPF8
chr8	145634433	145634456	-	CDS,intron-Distal	3.17289	5.17928	K562	YBX3
chr8	145620336	145620390	-	CDS,intron-Distal,intron-Proximal	3.59938	8.10680	HepG2	GRWD1
chr8	145619744	145619766	-	CDS,intron-Distal,intron-Proximal	3.73090	6.39499	HepG2	GRWD1
chr8	145619448	145619462	-	CDS,intron-Distal,intron-Proximal	4.58872	14.23489	HepG2	PPIG
chr8	145618536	145618579	-	CDS,intron-Distal,intron-Proximal	3.99606	4.77152	HepG2	PABPN1
chr8	145620096	145620180	-	CDS,intron-Distal,intron-Proximal	3.06310	4.95366	K562	FMR1
chr8	145623736	145623768	-	CDS,intron-Distal	4.67122	22.72517	K562	DDX24
chr8	145623914	145623920	-	CDS,intron-Distal,intron-Proximal	4.34100	13.31047	HepG2	PPIG
chr8	145624229	145624258	-	CDS,intron-Distal,intron-Proximal	3.08753	6.25099	K562	FMR1
chr8	145619339	145619375	-	CDS,intron-Distal,intron-Proximal	3.27779	3.09979	HepG2	LSM11
chr8	145624168	145624210	-	CDS,intron-Distal,intron-Proximal	3.27539	9.88280	HepG2	PPIG
chr8	145619098	145619102	-	CDS,intron-Distal,intron-Proximal	4.10359	3.59284	HepG2	LSM11
chr8	145620153	145620234	-	CDS,intron-Distal,intron-Proximal	3.49563	19.04316	HepG2	BUD13
chr8	145618693	145618726	-	CDS,intron-Distal,intron-Proximal	3.57186	5.57640	K562	YBX3
chr8	145624677	145624733	-	CDS,intron-Distal,intron-Proximal	5.24075	18.69631	K562	DDX24
chr8	145620313	145620367	-	CDS,intron-Distal,intron-Proximal	4.08377	8.71373	HepG2	PABPN1
chr8	145624418	145624458	-	CDS,intron-Distal,intron-Proximal	3.43768	5.37841	K562	SF3B4
chr8	145619207	145619247	-	CDS,intron-Distal,intron-Proximal	4.49769	7.42463	HepG2	PABPN1
chr8	145620749	145620815	-	CDS,intron-Distal,intron-Proximal	5.37276	28.69804	HepG2	SF3B4
chr8	145621518	145621571	-	CDS,intron-Distal,intron-Proximal	3.70764	12.48765	K562	PRPF8
chr8	145620123	145620238	-	CDS,intron-Distal,intron-Proximal	4.28157	36.39499	HepG2	PPIG
chr8	145620544	145620568	-	CDS,intron-Distal,intron-Proximal	3.61239	13.41787	HepG2	PPIG
chr8	145619458	145619502	-	CDS,intron-Distal,intron-Proximal	5.58711	7.48781	HepG2	PABPN1
chr8	145623346	145623384	-	CDS,intron-Distal,intron-Proximal	5.36072	15.42307	HepG2	SF3A3
chr8	145623234	145623269	-	CDS,intron-Distal	3.18385	4.83540	K562	FMR1
chr8	145621832	145621892	-	CDS,intron-Distal	3.21733	15.51936	HepG2	PPIG
chr8	145624347	145624400	-	CDS,intron-Distal,intron-Proximal	5.07377	15.44593	K562	FMR1
chr8	145623342	145623411	-	CDS,intron-Distal,intron-Proximal	3.52825	17.25975	HepG2	RBFOX2
chr8	145620145	145620215	-	CDS,intron-Distal,intron-Proximal	3.18660	4.99905	K562	RBFOX2
chr8	145623830	145623833	-	CDS,intron-Distal,intron-Proximal	3.82480	12.47924	HepG2	PPIG
chr8	145626370	145626436	-	CDS,intron-Distal,intron-Proximal	4.34649	7.63320	K562	FMR1
chr8	145619623	145619643	-	CDS,intron-Distal,intron-Proximal	4.36181	5.43239	K562	YBX3
chr8	145624183	145624213	-	CDS,intron-Distal	3.40016	8.75642	K562	UCHL5
chr8	145618996	145619006	-	CDS,intron-Distal,intron-Proximal	4.22345	9.56105	HepG2	PPIG
chr8	145623287	145623340	-	CDS,intron-Distal	3.69173	7.25168	HepG2	PRPF4
chr8	145623343	145623390	-	CDS,intron-Distal,intron-Proximal	4.19848	6.26407	K562	SF3B4
chr8	145620513	145620567	-	CDS,intron-Distal,intron-Proximal	4.38650	7.42463	HepG2	PABPN1
chr8	145624350	145624392	-	CDS,intron-Distal,intron-Proximal	4.78580	23.52548	K562	DDX24
chr8	145619341	145619374	-	CDS,intron-Distal,intron-Proximal	4.58856	9.03327	HepG2	PABPN1
chr8	145625175	145625203	-	CDS,intron-Distal,intron-Proximal	4.01216	16.46818	K562	DDX24
chr8	145624989	145625028	-	CDS,intron-Distal,intron-Proximal	3.24768	12.38664	HepG2	PPIG
chr8	145623345	145623395	-	CDS,intron-Distal,intron-Proximal	3.49111	6.59423	HepG2	SF3B4
chr8	145620197	145620231	-	CDS,intron-Distal,intron-Proximal	3.31668	10.35530	K562	ZNF622
chr8	145626628	145626680	-	CDS,intron-Distal	4.03593	18.30164	HepG2	PPIG
chr8	145624168	145624183	-	CDS,intron-Distal,intron-Proximal	4.08906	10.26568	K562	UCHL5
chr8	145620327	145620374	-	CDS,intron-Distal,intron-Proximal	4.67187	17.60140	HepG2	PPIG
chr8	145618983	145619009	-	CDS,intron-Distal,intron-Proximal	3.84890	4.52386	HepG2	PABPN1
chr8	145619869	145619918	-	CDS,intron-Distal,intron-Proximal	4.39861	6.35686	HepG2	PABPN1
chr8	145620263	145620326	-	CDS,intron-Distal,intron-Proximal	3.58206	20.35841	HepG2	PRPF8
chr8	145623914	145623938	-	CDS,intron-Distal,intron-Proximal	4.79014	7.67117	HepG2	GRWD1
chr8	145626149	145626185	-	CDS,intron-Distal	3.47897	10.89350	K562	YBX3
chr8	145619359	145619427	-	CDS,intron-Distal,intron-Proximal	4.22048	15.53137	K562	SF3B4
chr8	145624379	145624430	-	CDS,intron-Distal,intron-Proximal	3.42870	3.87400	K562	RBFOX2
chr8	145624841	145624850	-	CDS,intron-Distal,intron-Proximal	3.69275	7.84823	HepG2	PPIG
chr8	145621455	145621510	-	intron-Distal,intron-Proximal	3.14140	3.04625	HepG2	UCHL5
chr8	145625495	145625513	-	intron-Distal,intron-Proximal	4.44563	5.22198	HepG2	EFTUD2
chr8	145625927	145625950	-	intron-Distal,intron-Proximal	3.92210	3.65854	HepG2	RBFOX2
chr8	145620574	145620612	-	intron-Distal,intron-Proximal	5.08847	13.03281	K562	SF3B4
chr8	145621409	145621510	-	intron-Distal,intron-Proximal	3.31958	6.28235	K562	SMNDC1
chr8	145621287	145621368	-	intron-Distal,intron-Proximal	3.23694	9.01673	K562	XRN2
chr8	145621304	145621351	-	intron-Distal	3.55985	5.98995	HepG2	UCHL5
chr8	145625263	145625309	-	intron-Distal,intron-Proximal	4.09285	10.98901	K562	SF3B4
chr8	145634357	145634370	-	intron-Distal,intron-Proximal	5.41896	5.47635	HepG2	RBM22
chr8	145621300	145621385	-	intron-Distal	3.52163	14.12043	HepG2	EFTUD2
chr8	145621453	145621516	-	intron-Distal,intron-Proximal	3.80951	13.50210	HepG2	BUD13
chr8	145621452	145621513	-	intron-Distal,intron-Proximal	3.62502	10.33108	K562	UCHL5
chr8	145619018	145619080	-	intron-Distal,intron-Proximal	5.58369	12.96345	HepG2	EFTUD2
chr8	145626486	145626511	-	intron-Distal,intron-Proximal	3.79878	3.01266	HepG2	SF3B4
chr8	145621452	145621522	-	intron-Distal,intron-Proximal	3.50365	16.90504	K562	BUD13
chr8	145621469	145621488	-	intron-Distal,intron-Proximal	4.31418	11.72700	K562	ZNF622
chr8	145621293	145621387	-	intron-Distal,intron-Proximal	3.18143	7.87992	K562	AKAP8L
chr8	145621470	145621513	-	intron-Distal,intron-Proximal	3.87005	3.40454	HepG2	TROVE2
chr8	145621463	145621509	-	intron-Distal,intron-Proximal	3.05094	4.41501	K562	MTPAP
chr8	145621431	145621510	-	intron-Distal,intron-Proximal	5.19774	8.13169	HepG2	PRPF4
chr8	145621430	145621494	-	intron-Distal,intron-Proximal	3.50012	4.12420	K562	AGGF1
chr8	145621284	145621388	-	intron-Distal,intron-Proximal	3.76194	20.99183	K562	PRPF8
chr8	145624438	145624443	-	intron-Distal,intron-Proximal	5.21177	5.43043	K562	EFTUD2
chr8	145621406	145621520	-	intron-Distal,intron-Proximal	3.73591	20.08262	K562	SF3B4
chr8	145623574	145623620	-	intron-Distal,intron-Proximal	4.11862	6.81262	HepG2	RBFOX2
chr8	145623353	145623379	-	intron-Distal,intron-Proximal	3.46266	7.70481	K562	AQR
chr8	145622165	145622330	-	intron-Distal,intron-Proximal	4.77461	5.59072	HepG2	HNRNPK
chr8	145631647	145631726	-	intron-Distal	3.33670	3.61097	K562	ILF3
chr8	145620889	145620956	-	intron-Distal	4.08906	5.04760	HepG2	UCHL5
chr8	145626706	145626764	-	intron-Distal,intron-Proximal	6.11556	8.08771	HepG2	EFTUD2
chr8	145621403	145621452	-	intron-Distal	4.55267	17.16554	K562	BUD13
chr8	145621345	145621419	-	intron-Distal	3.83344	3.68836	HepG2	FKBP4
chr8	145623110	145623131	-	intron-Distal,intron-Proximal	4.81191	5.40008	K562	SF3B4
chr8	145621439	145621513	-	intron-Distal,intron-Proximal	6.86258	38.96012	K562	DDX24
chr8	145621459	145621512	-	intron-Distal,intron-Proximal	4.00418	13.94769	HepG2	EFTUD2
chr8	145623351	145623376	-	intron-Distal,intron-Proximal	3.88543	7.90300	K562	BUD13
chr8	145621134	145621198	-	intron-Distal,intron-Proximal	3.68615	11.14708	K562	PRPF8
chr8	145621512	145621553	-	intron-Distal,intron-Proximal	4.41510	40.31430	HepG2	PRPF8
chr8	145620398	145620435	-	intron-Distal,intron-Proximal	4.42219	11.37858	K562	SF3B4
chr8	145621398	145621445	-	intron-Distal	3.04826	11.78611	HepG2	PRPF8
chr8	145621301	145621398	-	intron-Distal	3.24513	7.40243	HepG2	PRPF4
chr8	145619015	145619065	-	intron-Distal,intron-Proximal	4.94307	11.52732	K562	SF3B4
chr8	145620782	145621033	-	intron-Distal,intron-Proximal	3.96422	6.73065	K562	HNRNPK
chr8	145620240	145620289	-	intron-Distal,intron-Proximal	5.96906	9.06724	K562	EFTUD2
chr8	145634328	145634357	-	intron-Distal,intron-Proximal	4.59861	6.08255	HepG2	RBM22
chr8	145623477	145623521	-	intron-Distal	3.14851	5.34140	HepG2	PRPF8
chr8	145621400	145621510	-	intron-Distal,intron-Proximal	5.24512	24.38246	K562	EFTUD2
chr8	145621401	145621452	-	intron-Distal	3.14388	4.43672	K562	XRN2
chr8	145619262	145619306	-	intron-Distal,intron-Proximal	4.44827	4.24670	HepG2	SF3B4
chr8	145628329	145628404	-	intron-Distal	3.80099	3.16095	HepG2	U2AF2
chr8	145620571	145620608	-	intron-Distal,intron-Proximal	5.64431	8.45613	K562	EFTUD2
chr8	145621045	145621102	-	intron-Distal	3.61935	4.51896	HepG2	XPO5
chr8	145621388	145621445	-	intron-Distal	3.36539	13.27491	K562	PRPF8
chr8	145620934	145620986	-	intron-Distal	3.56273	3.99122	K562	SMNDC1
chr8	145620588	145620614	-	intron-Distal,intron-Proximal	4.21323	3.56713	HepG2	SF3B4
chr8	145634353	145634390	-	intron-Distal,intron-Proximal	3.74151	7.35853	HepG2	PRPF8
chr8	145619388	145619419	-	intron-Distal,intron-Proximal	3.22734	7.45325	HepG2	SF3B4
chr8	145621401	145621415	-	intron-Distal	4.43263	5.98353	HepG2	EFTUD2
chr8	145620240	145620288	-	intron-Distal,intron-Proximal	3.93657	6.57821	HepG2	AQR
chr8	145620240	145620281	-	intron-Distal,intron-Proximal	5.89113	12.01365	K562	SF3B4
chr8	145619274	145619318	-	intron-Distal,intron-Proximal	4.36067	9.23607	HepG2	EFTUD2
chr8	145620819	145620850	-	intron-Distal,intron-Proximal	5.50638	10.42871	HepG2	SF3B4
chr8	145621445	145621511	-	intron-Distal,intron-Proximal	3.48105	16.89347	K562	PRPF8
chr8	145619034	145619070	-	intron-Distal,intron-Proximal	4.57203	4.77050	HepG2	SF3B4
chr8	145623351	145623393	-	intron-Distal,intron-Proximal	5.76797	15.63544	K562	DDX24
chr8	145634390	145634399	-	intron-Distal,intron-Proximal	4.20736	7.87148	HepG2	PRPF8
chr8	145623477	145623535	-	intron-Distal	4.89815	14.66106	HepG2	RBFOX2
chr8	145621219	145621273	-	intron-Distal,intron-Proximal	3.27462	8.07821	K562	PRPF8
chr8	145621471	145621538	-	intron-Distal,intron-Proximal	3.38570	15.60555	HepG2	RBM22
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for CPSF1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CPSF1 is not available on ENCORE database.
94 RBPs can affect the levels of CPSF1.

The Knockdown/knockout RNA-Seq assay for CPSF1 is not available on ENCORE database.

94 RBPs can affect the gene expression of CPSF1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CPSF1	ENSG00000071894.10	1077.76450	1547.22510	-0.52160	2.35420	1.63870	HepG2	CALR
CPSF1	ENSG00000071894.10	2159.56430	1399.21760	0.62600	1.96900	1.32900	HepG2	CNOT7
CPSF1	ENSG00000071894.10	1480.71730	1081.40000	0.45330	4.66210	3.34290	HepG2	YBX3
CPSF1	ENSG00000071894.10	2888.80780	1800.04590	0.68230	18.50230	17.14120	HepG2	CELF1
CPSF1	ENSG00000071894.10	2378.08120	1935.32570	0.29710	3.42470	2.61590	HepG2	DAZAP1
CPSF1	ENSG00000071894.10	969.37770	1541.77940	-0.66950	2.51350	1.64560	HepG2	DDX24
CPSF1	ENSG00000071894.10	3205.74960	2152.94220	0.57430	1.98940	1.45810	HepG2	DDX6
CPSF1	ENSG00000071894.10	1784.70450	1061.77440	0.74910	8.75730	7.56120	HepG2	DNAJC21
CPSF1	ENSG00000071894.10	1807.86940	1052.51400	0.78040	25.82170	24.02500	HepG2	DNAJC2
CPSF1	ENSG00000071894.10	3049.70880	2068.29410	0.56010	2.03140	1.51400	HepG2	EIF2S1
CPSF1	ENSG00000071894.10	2694.04510	1829.11510	0.55850	7.15310	5.86890	HepG2	EIF4G2
CPSF1	ENSG00000071894.10	5401.34660	4327.18440	0.31980	3.00900	2.38610	HepG2	ETF1
CPSF1	ENSG00000071894.10	3623.19130	2307.53160	0.65080	3.30110	2.54840	HepG2	FXR1
CPSF1	ENSG00000071894.10	3048.10800	2139.51020	0.51050	2.08720	1.50570	HepG2	G3BP1
CPSF1	ENSG00000071894.10	2420.98830	1752.52800	0.46610	3.92350	3.17240	HepG2	GPKOW
CPSF1	ENSG00000071894.10	2627.53000	1982.91390	0.40600	6.91960	5.85480	HepG2	HNRNPF
CPSF1	ENSG00000071894.10	4852.34190	2168.93130	1.16160	13.77800	12.33610	HepG2	HNRNPK
CPSF1	ENSG00000071894.10	2889.27020	1762.88340	0.71270	19.70690	18.06090	HepG2	HNRNPL
CPSF1	ENSG00000071894.10	2209.43560	1184.49590	0.89930	20.76640	19.21460	HepG2	HNRNPU
CPSF1	ENSG00000071894.10	2602.47700	1952.60540	0.41440	5.54990	4.56250	HepG2	IGF2BP1
CPSF1	ENSG00000071894.10	1731.95520	1209.91680	0.51740	12.38920	10.96200	HepG2	ILF2
CPSF1	ENSG00000071894.10	2753.09480	1919.07390	0.52050	2.84460	2.07010	HepG2	NOL12
CPSF1	ENSG00000071894.10	1454.20660	828.42900	0.81170	6.30700	4.15120	HepG2	NOLC1
CPSF1	ENSG00000071894.10	2729.45800	2263.20460	0.27010	3.96270	3.26290	HepG2	PCBP1
CPSF1	ENSG00000071894.10	1950.44500	1056.46900	0.88450	4.63580	3.70620	HepG2	PPIL4
CPSF1	ENSG00000071894.10	1516.94680	1867.40290	-0.29990	3.76680	2.87790	HepG2	PRPF4
CPSF1	ENSG00000071894.10	2666.95530	2302.97680	0.21160	2.47780	1.95550	HepG2	PTBP1
CPSF1	ENSG00000071894.10	3424.53880	1831.96980	0.90240	20.67840	19.25200	HepG2	PUF60
CPSF1	ENSG00000071894.10	3211.18470	1944.77050	0.72340	32.29420	30.71920	HepG2	PUM1
CPSF1	ENSG00000071894.10	2787.82990	1943.31660	0.52050	2.61970	1.96630	HepG2	PUM2
CPSF1	ENSG00000071894.10	1263.75730	791.47340	0.67500	3.97450	1.87410	HepG2	RBM14
CPSF1	ENSG00000071894.10	1615.37740	3616.67050	-1.16280	35.13690	33.69310	HepG2	RBM22
CPSF1	ENSG00000071894.10	2733.85030	1627.80660	0.74790	4.36340	3.09850	HepG2	RBM27
CPSF1	ENSG00000071894.10	3432.47140	2562.92430	0.42140	8.81240	7.94610	HepG2	NELFE
CPSF1	ENSG00000071894.10	3087.51730	2387.13850	0.37110	5.78580	4.93630	HepG2	RECQL
CPSF1	ENSG00000071894.10	2155.79620	1501.08040	0.52210	2.02940	1.33730	HepG2	RPS2
CPSF1	ENSG00000071894.10	1990.52460	1054.82340	0.91600	33.16110	31.28780	HepG2	SAFB2
CPSF1	ENSG00000071894.10	3065.36610	2397.54990	0.35440	6.46530	5.62350	HepG2	SF3B4
CPSF1	ENSG00000071894.10	3234.95530	1756.68360	0.88080	43.30640	41.24330	HepG2	SLBP
CPSF1	ENSG00000071894.10	1862.42510	1230.06420	0.59830	16.55560	15.18420	HepG2	SMN1
CPSF1	ENSG00000071894.10	1151.90040	1841.89950	-0.67720	4.80940	3.76590	HepG2	SNRNP70
CPSF1	ENSG00000071894.10	2522.30390	4084.79910	-0.69550	20.27000	19.24080	HepG2	SRFBP1
CPSF1	ENSG00000071894.10	1856.72660	2502.58270	-0.43070	8.53990	7.81350	HepG2	SRSF1
CPSF1	ENSG00000071894.10	3807.68170	1808.86770	1.07370	52.55310	50.31350	HepG2	SRSF5
CPSF1	ENSG00000071894.10	3750.70710	2057.12580	0.86640	42.42190	40.50030	HepG2	SUCLG1
CPSF1	ENSG00000071894.10	1247.49870	2249.58450	-0.85060	7.10690	6.27990	HepG2	TAF15
CPSF1	ENSG00000071894.10	2144.48210	1630.46360	0.39520	3.62380	2.80840	HepG2	TARDBP
CPSF1	ENSG00000071894.10	1792.77060	1150.81530	0.63940	6.97670	6.24920	HepG2	TIAL1
CPSF1	ENSG00000071894.10	2423.88880	1161.25710	1.06150	43.18810	41.30410	HepG2	TRIM56
CPSF1	ENSG00000071894.10	3423.49050	1789.84460	0.93550	4.92730	3.72590	HepG2	TUFM
CPSF1	ENSG00000071894.10	2162.71860	2673.82240	-0.30610	1.84860	1.32420	HepG2	U2AF1
CPSF1	ENSG00000071894.10	3597.68840	1894.57990	0.92510	2.03970	1.32670	HepG2	UBE2L3
CPSF1	ENSG00000071894.10	1944.84690	994.31800	0.96780	7.07700	5.85580	HepG2	UCHL5
CPSF1	ENSG00000071894.10	2191.33100	2805.97540	-0.35670	6.39840	5.55050	HepG2	UTP3
CPSF1	ENSG00000071894.10	2486.50080	3196.43880	-0.36230	9.02220	8.18030	HepG2	ZNF622
CPSF1	ENSG00000071894.10	7550.17860	5092.82190	0.56790	14.92920	13.71990	K562	AGGF1
CPSF1	ENSG00000071894.10	3757.74170	3171.93680	0.24440	3.09660	1.48980	K562	AKAP1
CPSF1	ENSG00000071894.10	7399.08810	5596.47030	0.40270	5.12970	3.69220	K562	AKAP8
CPSF1	ENSG00000071894.10	7054.62020	5299.36830	0.41260	3.79760	3.03020	K562	AKAP8L
CPSF1	ENSG00000071894.10	3798.52740	5194.95390	-0.45170	5.07840	4.32600	K562	AQR
CPSF1	ENSG00000071894.10	3193.02920	2406.09740	0.40810	4.03080	2.85420	K562	BCLAF1
CPSF1	ENSG00000071894.10	5114.99300	6086.01860	-0.25080	2.47260	1.37130	K562	CCDC124
CPSF1	ENSG00000071894.10	2803.10390	1825.38360	0.61870	13.23250	10.73100	K562	CSTF2
CPSF1	ENSG00000071894.10	6876.33130	8168.28610	-0.24840	3.13900	2.10240	K562	CELF1
CPSF1	ENSG00000071894.10	5238.40840	4392.79240	0.25390	2.60990	1.43620	K562	DDX21
CPSF1	ENSG00000071894.10	2598.04220	2109.62050	0.30030	2.89510	1.54170	K562	DDX27
CPSF1	ENSG00000071894.10	4140.68100	3258.62230	0.34550	5.33230	3.29870	K562	DDX6
CPSF1	ENSG00000071894.10	6703.87680	5702.14680	0.23340	3.22020	2.26660	K562	DKC1
CPSF1	ENSG00000071894.10	1652.89710	1039.87900	0.66850	11.96240	10.28830	K562	EIF3G
CPSF1	ENSG00000071894.10	3942.77430	3023.99600	0.38270	3.43080	2.12100	K562	EIF4B
CPSF1	ENSG00000071894.10	3714.29660	2931.12080	0.34150	4.87210	3.06520	K562	EWSR1
CPSF1	ENSG00000071894.10	1311.17180	1706.22870	-0.38000	3.20230	2.27680	K562	FMR1
CPSF1	ENSG00000071894.10	3066.64450	3492.07850	-0.18740	1.92160	1.39950	K562	FXR1
CPSF1	ENSG00000071894.10	84.37590	668.52240	-2.98610	28.36810	25.16550	K562	G3BP2
CPSF1	ENSG00000071894.10	2161.24640	1600.80620	0.43300	4.74010	3.70590	K562	GPKOW
CPSF1	ENSG00000071894.10	1957.17360	2829.67170	-0.53190	2.15530	1.61980	K562	HNRNPC
CPSF1	ENSG00000071894.10	3552.98620	1670.16450	1.08890	3.17120	2.04740	K562	IGF2BP2
CPSF1	ENSG00000071894.10	2648.01150	1698.06220	0.64090	3.23260	1.91730	K562	IGF2BP3
CPSF1	ENSG00000071894.10	2198.64920	3320.45600	-0.59480	3.38990	1.79330	K562	ILF2
CPSF1	ENSG00000071894.10	6646.13400	5623.75690	0.24090	2.42310	1.65710	K562	KIF1C
CPSF1	ENSG00000071894.10	971.78030	1367.08270	-0.49240	2.65970	1.74720	K562	KRR1
CPSF1	ENSG00000071894.10	2410.62000	1753.49310	0.45910	2.27840	1.51130	K562	MAGOH
CPSF1	ENSG00000071894.10	6731.09950	5383.47930	0.32220	3.57250	2.30190	K562	MAK16
CPSF1	ENSG00000071894.10	1977.95650	1562.59670	0.34000	3.29220	2.33590	K562	METAP2
CPSF1	ENSG00000071894.10	5481.56940	5000.56670	0.13240	2.29320	1.60790	K562	NSUN2
CPSF1	ENSG00000071894.10	5795.73040	3186.50180	0.86290	5.35070	3.84400	K562	PABPN1
CPSF1	ENSG00000071894.10	5745.75960	7246.45140	-0.33480	2.41850	1.65730	K562	PUF60
CPSF1	ENSG00000071894.10	5207.84630	7709.34480	-0.56590	8.73870	6.75810	K562	PUM1
CPSF1	ENSG00000071894.10	6597.00140	7551.99150	-0.19500	2.62530	1.68920	K562	PUM2
CPSF1	ENSG00000071894.10	7842.16040	5255.11700	0.57740	7.06200	6.24090	K562	PUS1
CPSF1	ENSG00000071894.10	1071.29810	747.58970	0.51890	4.65290	2.28230	K562	QKI
CPSF1	ENSG00000071894.10	7483.41660	5120.65320	0.54730	13.59030	12.27040	K562	RBM15
CPSF1	ENSG00000071894.10	6002.58180	4810.99060	0.31910	3.53040	1.70790	K562	RBM17
CPSF1	ENSG00000071894.10	889.02680	633.58070	0.48860	4.46070	2.70990	K562	RBM25
CPSF1	ENSG00000071894.10	3230.87660	2688.31420	0.26510	2.38420	1.38320	K562	SAFB
CPSF1	ENSG00000071894.10	1022.80310	694.65740	0.55810	6.69770	5.33000	K562	SF3B4
CPSF1	ENSG00000071894.10	6027.33980	3554.03510	0.76200	3.78740	2.16910	K562	SFPQ
CPSF1	ENSG00000071894.10	4045.73920	5055.34740	-0.32140	7.93430	6.44440	K562	SRPK2
CPSF1	ENSG00000071894.10	2521.77880	1670.45470	0.59410	2.72250	2.02020	K562	SRSF1
CPSF1	ENSG00000071894.10	2681.49880	1827.41750	0.55310	8.24300	6.29260	K562	SRSF4
CPSF1	ENSG00000071894.10	3112.85230	1578.11440	0.97990	6.18300	4.50380	K562	SRSF5
CPSF1	ENSG00000071894.10	2601.24170	3026.05950	-0.21820	2.00250	1.30460	K562	SYNCRIP
CPSF1	ENSG00000071894.10	251.45340	656.19270	-1.38380	5.09390	2.86790	K562	TAF15
CPSF1	ENSG00000071894.10	3150.89640	1690.17760	0.89850	3.76600	2.93480	K562	TARDBP
CPSF1	ENSG00000071894.10	3336.39310	1630.48060	1.03290	5.94790	4.67800	K562	TIA1
CPSF1	ENSG00000071894.10	3351.15110	1601.00800	1.06560	4.95170	3.41560	K562	TRA2A
CPSF1	ENSG00000071894.10	239.33610	668.87150	-1.48270	17.08290	15.04660	K562	U2AF2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CPSF1 is not available on ENCORE database.

36 RBPs can affect the splicing of CPSF1 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CPSF1	ENSG00000071894.10	chr8	-	145620096	145620238			145619858	145620011	145620312	145620550	-0.05200	0.00301	0.08393	excluded	K562	PRPF8
SE	CPSF1	ENSG00000071894.10	chr8	-	145630562	145630688			145628261	145628385	145634398	145634556	0.56000	0.00330	0.05481	included	HepG2	U2AF1
SE	CPSF1	ENSG00000071894.10	chr8	-	145628261	145628385			145627039	145627067	145634398	145634556	-0.53900	0.00007	0.00146	excluded	HepG2	U2AF2
SE	CPSF1	ENSG00000071894.10	chr8	-	145628261	145628385			145627039	145627067	145634398	145634556	-0.11100	0.00001	0.00261	excluded	K562	SUPV3L1
SE	CPSF1	ENSG00000071894.10	chr8	-	145628261	145628385			145627039	145627067	145634398	145634556	-0.08100	0.00015	0.00348	excluded	K562	PUS1
SE	CPSF1	ENSG00000071894.10	chr8	-	145630562	145630688			145628261	145628385	145634398	145634556	0.69000	0.00060	0.03147	included	HepG2	SFPQ
SE	CPSF1	ENSG00000071894.10	chr8	-	145630557	145630688			145628261	145628385	145634398	145634556	0.54600	0.00070	0.07295	included	HepG2	RBFOX2
SE	CPSF1	ENSG00000071894.10	chr8	-	145628261	145628385			145627039	145627067	145634398	145634556	-0.07100	0.00132	0.04191	excluded	K562	UTP18
SE	CPSF1	ENSG00000071894.10	chr8	-	145628261	145628385			145627039	145627067	145634398	145634556	-0.08200	0.00072	0.02136	excluded	K562	RBM15
SE	CPSF1	ENSG00000071894.10	chr8	-	145628261	145628385			145627039	145627067	145634398	145634556	-0.07800	0.00032	0.01127	excluded	K562	AGGF1
SE	CPSF1	ENSG00000071894.10	chr8	-	145628261	145628385			145627039	145627067	145634398	145634556	0.37900	0.00058	0.02544	included	HepG2	HNRNPC
SE	CPSF1	ENSG00000071894.10	chr8	-	145628261	145628385			145627039	145627067	145634398	145634556	0.21600	0.00191	0.03272	included	K562	HNRNPC
A3SS	CPSF1	ENSG00000071894.10	chr8	-	145625559	145625687			145625559	145625623	145625747	145625887	-0.06900	0.00016	0.01762	shorter	HepG2	SF3A3
A3SS	CPSF1	ENSG00000071894.10	chr8	-	145620649	145620864			145620649	145620766	145621562	145621715	0.14300	0.00000	0.00000	longer	K562	EFTUD2
A3SS	CPSF1	ENSG00000071894.10	chr8	-	145625198	145625276			145625198	145625258	145625381	145625670	0.05300	0.00001	0.00012	longer	K562	AQR
A3SS	CPSF1	ENSG00000071894.10	chr8	-	145622054	145622239			145622054	145622144	145622421	145622628	0.14600	0.00000	0.00000	longer	K562	AQR
A3SS	CPSF1	ENSG00000071894.10	chr8	-	145630562	145630712			145630562	145630688	145634398	145634521	0.48900	0.01046	0.05494	longer	K562	AQR
A3SS	CPSF1	ENSG00000071894.10	chr8	-	145620479	145620570			145620479	145620550	145620649	145620766	-0.07500	0.00000	0.00000	shorter	K562	AQR
A3SS	CPSF1	ENSG00000071894.10	chr8	-	145620649	145620864			145620649	145620766	145621562	145621739	0.06600	0.00167	0.06087	longer	HepG2	U2AF1
A5SS	CPSF1	ENSG00000071894.10	chr8	-	145619593	145619710			145619602	145619710	145619448	145619515	-0.12100	0.00000	0.01410	shorter	K562	LARP7
RI	CPSF1	ENSG00000071894.10	chr8	-	145620312	145620550			145620312	145620397	145620479	145620550	-0.05300	0.00014	0.02477	excluded	HepG2	DDX59
RI	CPSF1	ENSG00000071894.10	chr8	-	145620312	145620550			145620312	145620397	145620479	145620550	0.12200	0.00005	0.00148	included	K562	SF3B4
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619602	145619770	-0.11900	0.00032	0.04382	excluded	K562	DDX55
RI	CPSF1	ENSG00000071894.10	chr8	-	145619097	145619375			145619097	145619253	145619327	145619375	0.12700	0.00182	0.08303	included	K562	PPIL4
RI	CPSF1	ENSG00000071894.10	chr8	-	145620312	145620550			145620312	145620397	145620479	145620550	-0.05500	0.00186	0.08068	excluded	K562	DROSHA
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619593	145619770	-0.10100	0.00000	0.00091	excluded	K562	DROSHA
RI	CPSF1	ENSG00000071894.10	chr8	-	145620312	145620550			145620312	145620397	145620479	145620550	0.12900	0.00000	0.00000	included	HepG2	PCBP2
RI	CPSF1	ENSG00000071894.10	chr8	-	145619097	145619375			145619097	145619253	145619327	145619375	0.05100	0.00215	0.01489	included	K562	PUS1
RI	CPSF1	ENSG00000071894.10	chr8	-	145625559	145625887			145625559	145625670	145625747	145625887	0.06000	0.00000	0.00000	included	K562	PUS1
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619593	145619770	0.09600	0.00003	0.00030	included	K562	PUS1
RI	CPSF1	ENSG00000071894.10	chr8	-	145620312	145620550			145620312	145620397	145620479	145620550	0.17500	0.00000	0.00000	included	K562	PUS1
RI	CPSF1	ENSG00000071894.10	chr8	-	145619097	145619375			145619097	145619253	145619327	145619375	0.10700	0.00005	0.00115	included	HepG2	SF3A3
RI	CPSF1	ENSG00000071894.10	chr8	-	145625559	145625887			145625559	145625623	145625747	145625887	-0.07900	0.00017	0.00314	excluded	HepG2	SF3A3
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619602	145619770	-0.07600	0.00514	0.08722	excluded	K562	HNRNPC
RI	CPSF1	ENSG00000071894.10	chr8	-	145619097	145619375			145619097	145619253	145619327	145619375	0.07200	0.00031	0.02656	included	K562	EIF4G2
RI	CPSF1	ENSG00000071894.10	chr8	-	145620312	145620550			145620312	145620397	145620479	145620550	0.20800	0.00000	0.00000	included	HepG2	U2AF2
RI	CPSF1	ENSG00000071894.10	chr8	-	145625559	145625887			145625559	145625670	145625747	145625887	0.08600	0.00330	0.02453	included	HepG2	U2AF2
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619593	145619770	0.17000	0.00003	0.00038	included	HepG2	U2AF2
RI	CPSF1	ENSG00000071894.10	chr8	-	145620312	145620550			145620312	145620397	145620479	145620550	0.06200	0.00025	0.00923	included	HepG2	UCHL5
RI	CPSF1	ENSG00000071894.10	chr8	-	145620312	145620550			145620312	145620397	145620479	145620550	0.07500	0.00006	0.00145	included	HepG2	PRPF8
RI	CPSF1	ENSG00000071894.10	chr8	-	145624183	145624428			145624183	145624258	145624347	145624428	0.07400	0.00007	0.00166	included	HepG2	PRPF8
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619602	145619770	-0.18000	0.00000	0.00226	excluded	K562	LARP7
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619602	145619770	-0.12000	0.00043	0.04035	excluded	K562	PHF6
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619602	145619770	-0.08300	0.00885	0.08203	excluded	K562	AGGF1
RI	CPSF1	ENSG00000071894.10	chr8	-	145620312	145620550			145620312	145620397	145620479	145620550	0.11300	0.00000	0.00006	included	K562	PRPF8
RI	CPSF1	ENSG00000071894.10	chr8	-	145624183	145624428			145624183	145624258	145624347	145624428	0.14600	0.00000	0.00000	included	K562	PRPF8
RI	CPSF1	ENSG00000071894.10	chr8	-	145625381	145625670			145625381	145625475	145625559	145625670	0.06500	0.00000	0.00008	included	K562	PRPF8
RI	CPSF1	ENSG00000071894.10	chr8	-	145620096	145620336			145620096	145620238	145620312	145620336	0.05700	0.00029	0.00534	included	K562	PRPF8
RI	CPSF1	ENSG00000071894.10	chr8	-	145619097	145619375			145619097	145619253	145619327	145619375	0.16400	0.00326	0.03807	included	K562	PRPF8
RI	CPSF1	ENSG00000071894.10	chr8	-	145625559	145625887			145625559	145625670	145625747	145625887	0.14400	0.00000	0.00000	included	K562	PRPF8
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619593	145619770	0.16300	0.00000	0.00000	included	K562	PRPF8
RI	CPSF1	ENSG00000071894.10	chr8	-	145619097	145619375			145619097	145619253	145619327	145619375	0.06600	0.00416	0.04774	included	HepG2	PCBP1
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619593	145619770	0.05700	0.00065	0.05160	included	K562	XRN2
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619602	145619770	-0.18200	0.00000	0.00092	excluded	K562	AARS
RI	CPSF1	ENSG00000071894.10	chr8	-	145624183	145624428			145624183	145624258	145624347	145624428	0.06000	0.00658	0.09719	included	K562	RBM22
RI	CPSF1	ENSG00000071894.10	chr8	-	145625559	145625887			145625559	145625670	145625747	145625887	0.10500	0.00052	0.01527	included	K562	RBM22
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619695			145619448	145619515	145619593	145619695	0.11500	0.00001	0.00053	included	K562	RBM22
RI	CPSF1	ENSG00000071894.10	chr8	-	145620312	145620550			145620312	145620397	145620479	145620550	0.06600	0.00254	0.09869	included	K562	BUD13
RI	CPSF1	ENSG00000071894.10	chr8	-	145620312	145620550			145620312	145620397	145620479	145620550	0.05300	0.00161	0.01685	included	K562	AKAP8L
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619593	145619770	0.05600	0.00706	0.05858	included	K562	AKAP8L
RI	CPSF1	ENSG00000071894.10	chr8	-	145619097	145619375			145619097	145619253	145619327	145619375	0.12900	0.00004	0.00072	included	HepG2	U2AF1
RI	CPSF1	ENSG00000071894.10	chr8	-	145625559	145625887			145625559	145625670	145625747	145625887	0.07700	0.00000	0.00000	included	HepG2	U2AF1
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619593	145619770	0.14400	0.00050	0.00644	included	HepG2	U2AF1
RI	CPSF1	ENSG00000071894.10	chr8	-	145620312	145620550			145620312	145620397	145620479	145620550	0.11800	0.00000	0.00000	included	HepG2	U2AF1
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619602	145619770	-0.15800	0.00047	0.04002	excluded	K562	KHSRP
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619593	145619770	0.05500	0.00098	0.04216	included	K562	SUPV3L1
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619593	145619770	0.12100	0.00000	0.00002	included	K562	RBM15
RI	CPSF1	ENSG00000071894.10	chr8	-	145620312	145620550			145620312	145620397	145620479	145620550	0.10500	0.00000	0.00000	included	K562	RBM15
RI	CPSF1	ENSG00000071894.10	chr8	-	145620312	145620550			145620312	145620397	145620479	145620550	0.21200	0.00000	0.00000	included	K562	U2AF2
RI	CPSF1	ENSG00000071894.10	chr8	-	145620312	145620550			145620312	145620397	145620479	145620550	0.07200	0.00120	0.05431	included	HepG2	HNRNPC
RI	CPSF1	ENSG00000071894.10	chr8	-	145620312	145620550			145620312	145620397	145620479	145620550	0.06200	0.00099	0.01424	included	HepG2	NCBP2
RI	CPSF1	ENSG00000071894.10	chr8	-	145619097	145619375			145619097	145619253	145619327	145619375	0.11700	0.00006	0.00141	included	HepG2	NCBP2
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619593	145619770	0.08700	0.00005	0.00123	included	HepG2	NCBP2
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619593	145619770	0.09300	0.00001	0.00152	included	K562	SERBP1
RI	CPSF1	ENSG00000071894.10	chr8	-	145619097	145619375			145619097	145619253	145619327	145619375	0.14800	0.00000	0.00000	included	HepG2	SF3B4
RI	CPSF1	ENSG00000071894.10	chr8	-	145620312	145620550			145620312	145620397	145620479	145620550	0.07600	0.00004	0.00057	included	HepG2	SF3B4
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619593	145619770	0.10200	0.00000	0.00005	included	HepG2	RBM22
RI	CPSF1	ENSG00000071894.10	chr8	-	145620312	145620550			145620312	145620397	145620479	145620550	0.07500	0.00015	0.00300	included	K562	UTP18
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619593	145619770	0.10500	0.00002	0.00045	included	K562	UTP18
RI	CPSF1	ENSG00000071894.10	chr8	-	145624183	145624428			145624183	145624258	145624347	145624428	0.12600	0.00000	0.00000	included	K562	EFTUD2
RI	CPSF1	ENSG00000071894.10	chr8	-	145619097	145619375			145619097	145619253	145619327	145619375	0.27600	0.00000	0.00001	included	K562	EFTUD2
RI	CPSF1	ENSG00000071894.10	chr8	-	145625559	145625887			145625559	145625670	145625747	145625887	0.07200	0.00002	0.00033	included	K562	EFTUD2
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619593	145619770	0.08600	0.00000	0.00006	included	K562	EFTUD2
RI	CPSF1	ENSG00000071894.10	chr8	-	145620312	145620550			145620312	145620397	145620479	145620550	0.12100	0.00000	0.00000	included	K562	EFTUD2
RI	CPSF1	ENSG00000071894.10	chr8	-	145619097	145619375			145619097	145619253	145619327	145619375	0.15000	0.00005	0.01187	included	K562	SAFB
RI	CPSF1	ENSG00000071894.10	chr8	-	145624665	145624872			145624665	145624763	145624841	145624872	0.05200	0.00002	0.00014	included	K562	AQR
RI	CPSF1	ENSG00000071894.10	chr8	-	145620312	145620550			145620312	145620397	145620479	145620550	0.22100	0.00000	0.00000	included	K562	AQR
RI	CPSF1	ENSG00000071894.10	chr8	-	145624183	145624428			145624183	145624258	145624347	145624428	0.09700	0.00000	0.00000	included	K562	AQR
RI	CPSF1	ENSG00000071894.10	chr8	-	145625381	145625670			145625381	145625475	145625559	145625670	0.06300	0.00000	0.00000	included	K562	AQR
RI	CPSF1	ENSG00000071894.10	chr8	-	145619097	145619375			145619097	145619253	145619327	145619375	0.28600	0.00000	0.00000	included	K562	AQR
RI	CPSF1	ENSG00000071894.10	chr8	-	145625559	145625887			145625559	145625670	145625747	145625887	0.09100	0.00000	0.00001	included	K562	AQR
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619593	145619770	0.18900	0.00000	0.00000	included	K562	AQR
RI	CPSF1	ENSG00000071894.10	chr8	-	145624517	145624740			145624517	145624592	145624665	145624740	0.16900	0.00000	0.00000	included	K562	AQR
RI	CPSF1	ENSG00000071894.10	chr8	-	145620312	145620550			145620312	145620397	145620479	145620550	0.15400	0.00000	0.00000	included	K562	GPKOW
RI	CPSF1	ENSG00000071894.10	chr8	-	145619448	145619770			145619448	145619515	145619593	145619770	0.14000	0.00000	0.00000	included	K562	TARDBP
MXE	CPSF1	ENSG00000071894.10	chr8	-	145626317	145626469	145626604	145626685	145626064	145626211	145626823	145626957	-0.18200	0.00001	0.00081	2included	K562	TARDBP
MXE	CPSF1	ENSG00000071894.10	chr8	-	145619858	145620011	145620096	145620238	145619593	145619770	145620312	145620397	-0.17400	0.00010	0.00511	2included	K562	EFTUD2
MXE	CPSF1	ENSG00000071894.10	chr8	-	145619858	145620011	145620096	145620238	145619593	145619770	145620312	145620397	-0.19600	0.00004	0.00181	2included	K562	PRPF8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CPSF1

General Information

Functions

Localization

Domains (AlphaFold: CPSF1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CPSF1 is not avaliable on ENCORE database.

40 proteins are bound to CPSF1 RNA:

eCLIP assay for CPSF1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CPSF1 is not available on ENCORE database.

94 RBPs can affect the gene expression of CPSF1 :

The Knockdown/knockout RNA-Seq assay for CPSF1 is not available on ENCORE database.

36 RBPs can affect the splicing of CPSF1 :

The Knockdown/knockout RNA-Seq assay for CPSF1 is not avaliable on ENCORE database.