KCTD19

General Information

Gene Name : KCTD19
Gene ID : ENSG00000168676.10
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: KCTD19)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	KCTD19	ENSG00000168676.10	4.88	4.26	4.57	ENCSR000AEF
HepG2	KCTD19	ENSG00000168676.10	0.13	0.00	0.07	ENCSR985KAT
K562	KCTD19	ENSG00000168676.10	0.38	0.21	0.29	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for KCTD19 is not avaliable on ENCORE database.

Proteins bound to RNA

KCTD19 RNA is bound by 2 proteins.

eCLIP assay for KCTD19 is not avaliable on ENCORE database.

2 proteins are bound to KCTD19 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	67355601	67355649	-	intron-Distal	3.07525	3.19733	K562	ZNF622
chr16	67355558	67355609	-	intron-Distal	7.98372	14.69854	HepG2	LARP7
chr16	67355609	67355656	-	intron-Distal	6.27238	9.55763	HepG2	LARP7
chr16	67355617	67355635	-	intron-Distal	4.61976	27.36540	K562	LARP7
chr16	67355561	67355617	-	intron-Distal	6.45515	400.00000	K562	LARP7
chr16	67355558	67355601	-	intron-Distal	4.13832	5.37538	K562	ZNF622
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for KCTD19 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for KCTD19 is not available on ENCORE database.
3 RBPs can affect the levels of KCTD19.

The Knockdown/knockout RNA-Seq assay for KCTD19 is not available on ENCORE database.

3 RBPs can affect the gene expression of KCTD19 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
KCTD19	ENSG00000168676.6	39.97140	7.71080	2.37390	4.24150	3.21070	K562	PCBP3
KCTD19	ENSG00000168676.6	21.25790	5.91450	1.84560	2.01210	1.32840	K562	POLR2G
KCTD19	ENSG00000168676.6	24.77450	6.62000	1.90390	2.39170	1.49840	K562	PUM2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

KCTD19

General Information

Functions

Localization

Domains (AlphaFold: KCTD19)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for KCTD19 is not avaliable on ENCORE database.

2 proteins are bound to KCTD19 RNA:

eCLIP assay for KCTD19 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for KCTD19 is not available on ENCORE database.

3 RBPs can affect the gene expression of KCTD19 :

The Knockdown/knockout RNA-Seq assay for KCTD19 is not available on ENCORE database.

No RBPs affect the alternative splcing events of KCTD19 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for KCTD19 is not avaliable on ENCORE database.