SP110

General Information

Gene Name       : SP110
Gene ID             : ENSG00000135899.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SP110)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SP110ENSG00000135899.17110.89101.63106.26ENCSR000AEF
HepG2SP110ENSG00000135899.178.0211.969.99ENCSR985KAT
K562SP110ENSG00000135899.175.705.935.81ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SP110 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SP110 RNA is bound by 1 proteins.  







eCLIP assay for SP110 is not avaliable on ENCORE database.





1 proteins are bound to SP110 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2231076173231076240-5'-UTR,CDS,intron-Distal,intron-Proximal4.080343.02457HepG2BCLAF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SP110 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SP110 is not available on ENCORE database.

  • 77 RBPs can affect the levels of SP110.  








The Knockdown/knockout RNA-Seq assay for SP110 is not available on ENCORE database.





77 RBPs can affect the gene expression of SP110 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SP110ENSG00000135899.12478.77220326.227800.553403.197002.18190HepG2ABCF1
SP110ENSG00000135899.12355.02800198.638200.837704.332003.60400HepG2ACO1
SP110ENSG00000135899.12667.05400274.118601.2829013.4913012.40910HepG2AKAP1
SP110ENSG00000135899.12396.60430199.620800.9903011.125209.72080HepG2AKAP8L
SP110ENSG00000135899.12436.55490226.829100.944507.706906.42780HepG2ASCC1
SP110ENSG00000135899.12539.64860348.626600.630206.482905.50170HepG2AUH
SP110ENSG00000135899.12362.44080244.496400.567803.754102.32740HepG2BUD13
SP110ENSG00000135899.12403.13910285.734500.496503.141302.32410HepG2CALR
SP110ENSG00000135899.12789.35250462.403500.771405.899104.45010HepG2CCAR1
SP110ENSG00000135899.12441.31570215.497101.034008.975907.65030HepG2CIRBP
SP110ENSG00000135899.12380.16010198.654400.936207.622206.62270HepG2CKAP4
SP110ENSG00000135899.12501.25350330.495900.600806.032905.15330HepG2CELF1
SP110ENSG00000135899.12279.42310183.739200.604704.341103.32550HepG2DDX19B
SP110ENSG00000135899.12412.01780243.612900.758004.733803.87270HepG2DDX21
SP110ENSG00000135899.12352.30810238.265100.564203.270202.27410HepG2DDX24
SP110ENSG00000135899.12525.28010262.625601.000009.031207.95620HepG2DDX3X
SP110ENSG00000135899.12598.72360233.393201.3590014.7401013.14290HepG2DDX55
SP110ENSG00000135899.12339.72640190.058300.837806.511205.55530HepG2DKC1
SP110ENSG00000135899.12414.75620234.600800.822005.546604.27830HepG2EEF2
SP110ENSG00000135899.12280.26910195.586000.518902.377601.35190HepG2EFTUD2
SP110ENSG00000135899.12328.53700224.223100.551002.447001.41100HepG2AGO1
SP110ENSG00000135899.12359.21610216.878500.727904.398203.66000HepG2EIF2S1
SP110ENSG00000135899.12315.50830190.450300.728204.286903.17820HepG2EIF3D
SP110ENSG00000135899.12478.93290239.722200.998408.368307.25890HepG2EIF4A3
SP110ENSG00000135899.12390.44210282.659600.465902.561601.50990HepG2ESF1
SP110ENSG00000135899.12369.90010194.157700.929808.165406.74520HepG2EWSR1
SP110ENSG00000135899.12470.90600329.432300.515402.790402.01640HepG2FIP1L1
SP110ENSG00000135899.12366.45810241.730600.600103.305202.55220HepG2FXR1
SP110ENSG00000135899.12375.33530224.313700.742604.759603.89790HepG2G3BP1
SP110ENSG00000135899.12331.23400238.042200.476502.214101.42210HepG2G3BP2
SP110ENSG00000135899.12269.24430189.678600.505302.988801.97690HepG2HDGF
SP110ENSG00000135899.12330.26240240.200700.459302.127401.55360HepG2HNRNPA1
SP110ENSG00000135899.12399.56630267.182600.580503.409202.64590HepG2HNRNPC
SP110ENSG00000135899.12404.66610228.036000.827405.896704.94830HepG2IGF2BP2
SP110ENSG00000135899.12389.02950213.897200.862902.836101.84190HepG2IGF2BP3
SP110ENSG00000135899.12374.66050229.316600.708103.729502.54660HepG2KHSRP
SP110ENSG00000135899.12503.55500298.860700.752604.757703.10930HepG2KRR1
SP110ENSG00000135899.12389.10230243.190400.678003.091802.42820HepG2MATR3
SP110ENSG00000135899.12416.18980266.711400.641904.705303.67170HepG2MSI2
SP110ENSG00000135899.12426.00760248.937300.775005.220604.36290HepG2NCBP2
SP110ENSG00000135899.12490.82850352.308600.478303.888302.98400HepG2NOL12
SP110ENSG00000135899.12404.93800274.036100.563204.396103.66070HepG2PCBP1
SP110ENSG00000135899.12430.81560289.077900.575502.756301.71770HepG2PCBP2
SP110ENSG00000135899.12298.11770180.128700.726804.194003.22360HepG2PRPF8
SP110ENSG00000135899.12385.02340278.838700.465402.936302.37600HepG2PTBP1
SP110ENSG00000135899.12482.53570357.053300.434404.010103.32440HepG2PUM1
SP110ENSG00000135899.12308.49660202.334600.608404.342703.60320HepG2PUS1
SP110ENSG00000135899.12735.21840334.558601.1358019.1944018.08070HepG2RBM22
SP110ENSG00000135899.12418.22100310.323400.430402.587002.06060HepG2NELFE
SP110ENSG00000135899.12393.88750289.019200.446502.777802.15980HepG2RECQL
SP110ENSG00000135899.12494.26210381.965500.371702.126901.51820HepG2RPLP0
SP110ENSG00000135899.12327.48060185.310700.821405.858405.00300HepG2RPS19
SP110ENSG00000135899.12327.06790213.906000.612501.997501.31780HepG2RPS3A
SP110ENSG00000135899.12363.20140178.192801.027207.482406.26570HepG2RRP9
SP110ENSG00000135899.12291.47370185.997400.648003.477302.41970HepG2SERBP1
SP110ENSG00000135899.121221.41930466.269701.3892012.9101011.23720HepG2SNRNP70
SP110ENSG00000135899.12793.06320377.867601.0695020.7720019.73210HepG2SRFBP1
SP110ENSG00000135899.12464.13680303.021500.615005.075404.48510HepG2SRSF1
SP110ENSG00000135899.12508.94640332.105800.615806.475805.57330HepG2SRSF5
SP110ENSG00000135899.12457.91870246.522000.8933011.0590010.08480HepG2SRSF9
SP110ENSG00000135899.12474.04760328.071400.530904.596403.96930HepG2SSB
SP110ENSG00000135899.12360.38350232.363900.633003.492002.74360HepG2SUPV3L1
SP110ENSG00000135899.12374.79830272.360900.460502.703002.14840HepG2TAF15
SP110ENSG00000135899.12584.01650281.859401.0509011.032509.75640HepG2U2AF1
SP110ENSG00000135899.12792.18270340.364801.218704.114702.89970HepG2U2AF2
SP110ENSG00000135899.12454.35890314.422800.531004.214602.95380HepG2UTP18
SP110ENSG00000135899.12415.67940295.323900.493102.870502.26380HepG2UTP3
SP110ENSG00000135899.12371.25870269.642900.461302.422801.78790HepG2ZC3H8
SP110ENSG00000135899.12157.23440224.80280-0.515701.898201.35310K562AKAP8L
SP110ENSG00000135899.12168.19060244.64030-0.540602.190401.65800K562AQR
SP110ENSG00000135899.12378.46060257.470900.555603.341102.63550K562DDX47
SP110ENSG00000135899.12201.86200115.362300.807103.844501.84370K562DDX51
SP110ENSG00000135899.12195.26120110.571500.820303.698502.18910K562EEF2
SP110ENSG00000135899.12185.68450106.849200.797203.633302.57520K562EFTUD2
SP110ENSG00000135899.12239.1783098.478801.280106.156904.61540K562EIF3A
SP110ENSG00000135899.12208.41230114.429100.864904.042902.76290K562EIF3D
SP110ENSG00000135899.12172.02080108.730900.661702.763002.15810K562FXR1
SP110ENSG00000135899.12331.89600234.196000.502902.572001.80470K562GPKOW
SP110ENSG00000135899.12280.78500163.913600.776404.547103.80080K562HNRNPC
SP110ENSG00000135899.12179.66290103.975900.788903.204002.39620K562PRPF8
SP110ENSG00000135899.12286.58060134.123401.095308.623906.86830K562RCC2
SP110ENSG00000135899.12203.42530105.930000.941304.463803.42300K562RPS19
SP110ENSG00000135899.12254.30110146.109700.799404.624203.21740K562SAFB
SP110ENSG00000135899.12323.23080222.708200.537302.396101.49600K562SF3B1
SP110ENSG00000135899.12174.47310289.88670-0.732504.621102.94110K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SP110 is not available on ENCORE database.





2 RBPs can affect the splicing of SP110 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESP110ENSG00000135899.12chr2-2310814952310816432310796642310798332310845882310846880.113000.000610.04049includedHepG2AKAP1
SESP110ENSG00000135899.12chr2-2310814952310816432310796642310798332310845882310846880.106000.000240.05135includedHepG2DDX55

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SP110 is not avaliable on ENCORE database.