INO80E

General Information

Gene Name       : INO80E
Gene ID             : ENSG00000169592.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: INO80E)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878INO80EENSG00000169592.1426.0446.0836.06ENCSR000AEF
HepG2INO80EENSG00000169592.1457.5359.7758.65ENCSR985KAT
K562INO80EENSG00000169592.1477.2768.3772.82ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for INO80E is not avaliable on ENCORE database.



Proteins bound to RNA
  • INO80E RNA is bound by 30 proteins.  







eCLIP assay for INO80E is not avaliable on ENCORE database.





30 proteins are bound to INO80E RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr163001690730016951+3'-UTR3.373053.27165HepG2RBFOX2
chr163001688030017010+3'-UTR4.720176.20043HepG2UPF1
chr163001281730012900+3'-UTR,CDS,intron-Distal,intron-Proximal3.8606514.12943HepG2PRPF8
chr163001675830016837+3'-UTR,CDS3.358755.64190HepG2PABPN1
chr163001272030012825+3'-UTR,CDS,intron-Distal,intron-Proximal3.6877310.52012K562PCBP1
chr163001285030012904+3'-UTR,CDS,intron-Distal,intron-Proximal5.650679.63974K562AQR
chr163001413930014202+3'-UTR,intron-Distal4.5366312.57889HepG2PRPF4
chr163001653330016590+3'-UTR,CDS,intron-Distal,intron-Proximal3.320604.61161HepG2SF3B4
chr163001265730012730+3'-UTR,intron-Distal,intron-Proximal4.9226016.91521HepG2PCBP2
chr163001683930016911+3'-UTR4.4676310.64484HepG2PABPN1
chr163001648030016595+3'-UTR,CDS,intron-Distal,intron-Proximal3.9037616.53362K562SF3B4
chr163001470730014821+3'-UTR,intron-Distal,intron-Proximal4.589145.85494HepG2DROSHA
chr163001651530016603+3'-UTR,CDS,intron-Distal,intron-Proximal5.8451010.84943K562AQR
chr163001684530016891+3'-UTR6.7356910.19274K562PABPC4
chr163001685030016899+3'-UTR3.222523.38928HepG2ZC3H11A
chr163001653130016603+3'-UTR,CDS,intron-Distal,intron-Proximal3.033504.88110HepG2LSM11
chr163001474230014774+3'-UTR,intron-Distal,intron-Proximal3.425683.92899HepG2PRPF4
chr163001415430014208+3'-UTR,intron-Distal3.831415.53636HepG2GTF2F1
chr163001690430016965+3'-UTR3.661325.35253HepG2LSM11
chr163001267230012815+3'-UTR,CDS,intron-Distal,intron-Proximal5.845058.02516HepG2PCBP1
chr163001258330012642+3'-UTR,intron-Distal,intron-Proximal3.832964.29246HepG2SF3B4
chr163001273030012809+3'-UTR,CDS,intron-Distal,intron-Proximal4.0694315.79223HepG2PCBP2
chr163001415330014203+3'-UTR,intron-Distal4.491414.65580K562GTF2F1
chr163001263530012733+3'-UTR,intron-Distal,intron-Proximal4.4338012.12361HepG2U2AF2
chr163001413530014205+3'-UTR,intron-Distal3.654335.64869HepG2HNRNPU
chr163001691130017001+3'-UTR4.966617.76900HepG2PABPN1
chr163001672330016814+3'-UTR,CDS3.100973.46181K562DDX55
chr163001396730014035+3'-UTR,intron-Distal4.719366.58550HepG2CSTF2T
chr163000757630007649+5'-UTR,CDS3.648936.38040K562DDX55
chr163000759030007657+5'-UTR,CDS3.908083.66700HepG2SRSF1
chr163000755930007709+5'-UTR,CDS3.156517.75835K562DDX3X
chr163000758830007676+5'-UTR,CDS3.980473.34382K562APOBEC3C
chr163000757530007682+5'-UTR,CDS3.792448.19027HepG2NCBP2
chr163000788430007971+CDS,intron-Proximal3.065135.18023HepG2GRWD1
chr163001208730012131+CDS3.274328.51590HepG2GRWD1
chr163001228930012364+CDS,intron-Proximal4.750507.59520K562PCBP1
chr163000793630007982+CDS,intron-Proximal5.396367.36776HepG2PRPF8
chr163000817430008182+CDS,intron-Proximal4.351626.70085HepG2PPIG
chr163000812530008174+CDS,intron-Proximal3.543455.10448HepG2PPIG
chr163001213130012155+CDS3.599385.28199HepG2GRWD1
chr163001224930012282+CDS,intron-Proximal3.482614.68592HepG2PPIG
chr163001207730012155+CDS,intron-Proximal4.8833020.98582HepG2PPIG
chr163000767730007710+CDS4.357464.38106HepG2PPIG
chr163001228130012359+CDS3.252644.73488HepG2GRWD1
chr163000805630008171+CDS,intron-Proximal3.094969.82350HepG2EFTUD2
chr163001207730012147+CDS,intron-Proximal3.920474.28216HepG2UCHL5
chr163000815330008213+CDS,intron-Proximal3.377074.71929HepG2PRPF8
chr163001447030014558+intron-Distal3.389297.17193HepG2PRPF4
chr163001630230016359+intron-Distal3.780833.06084HepG2HNRNPK
chr163001311930013181+intron-Distal3.817926.25245HepG2PRPF4
chr163001359330013664+intron-Distal,intron-Proximal3.609265.83116HepG2HNRNPU
chr163001447730014556+intron-Distal4.395834.44454K562UCHL5
chr163001438030014433+intron-Distal,intron-Proximal3.652384.40053K562GTF2F1
chr163001569430015750+intron-Distal3.307164.35431HepG2PRPF4
chr163001534530015402+intron-Distal4.028775.32871HepG2CSTF2T
chr163001635030016416+intron-Distal4.082405.26367K562AQR
chr163001437330014440+intron-Distal,intron-Proximal3.939954.98844HepG2FAM120A
chr163001450830014555+intron-Distal4.322444.10415HepG2RBM5
chr163001437230014427+intron-Distal,intron-Proximal3.123544.67313HepG2PRPF4
chr163001438530014439+intron-Distal,intron-Proximal3.984394.99558HepG2GTF2F1
chr163001449930014564+intron-Distal3.213853.10831HepG2FAM120A
chr163001648130016533+intron-Distal,intron-Proximal4.3858510.14692HepG2SF3B4
chr163001459730014643+intron-Distal3.301713.92899HepG2PRPF4
chr163001237830012409+intron-Proximal4.268386.99120K562AQR
chr163001239030012450+intron-Proximal4.270937.91903HepG2RBM22
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for INO80E is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for INO80E is not available on ENCORE database.

  • 71 RBPs can affect the levels of INO80E.  








The Knockdown/knockout RNA-Seq assay for INO80E is not available on ENCORE database.





71 RBPs can affect the gene expression of INO80E :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
INO80EENSG00000169592.101560.66830941.429300.729106.959406.15820HepG2AKAP1
INO80EENSG00000169592.101258.57220830.312300.600004.300603.13090HepG2BCCIP
INO80EENSG00000169592.10532.53280895.46910-0.749808.517507.53650HepG2BOP1
INO80EENSG00000169592.10957.383701272.43040-0.410406.469105.52970HepG2CKAP4
INO80EENSG00000169592.101086.14570822.071500.401802.951302.24450HepG2CPSF6
INO80EENSG00000169592.101127.74170811.413500.474804.442503.60380HepG2DDX21
INO80EENSG00000169592.10447.26520794.45790-0.8288010.552208.81360HepG2DDX24
INO80EENSG00000169592.101495.44910816.404200.873109.064207.75810HepG2DDX55
INO80EENSG00000169592.101130.17240774.878000.544403.998003.26680HepG2DDX6
INO80EENSG00000169592.10931.566801217.66260-0.386404.755303.91080HepG2DKC1
INO80EENSG00000169592.101024.14960697.902100.553209.130008.02640HepG2DNAJC2
INO80EENSG00000169592.101604.10370744.600201.1071017.3983016.00110HepG2EIF2S1
INO80EENSG00000169592.10724.195501243.66560-0.7801011.9411010.24610HepG2EWSR1
INO80EENSG00000169592.10961.18650665.557400.530205.826804.09010HepG2FAM120A
INO80EENSG00000169592.10897.53810628.659900.513604.547803.55410HepG2FUBP3
INO80EENSG00000169592.101245.70670854.277000.544103.487502.23170HepG2FUS
INO80EENSG00000169592.101294.77520830.543400.640506.242705.23050HepG2FXR1
INO80EENSG00000169592.101380.40040770.213000.841709.754508.54330HepG2G3BP1
INO80EENSG00000169592.101445.624201215.084300.250502.646801.68850HepG2HDGF
INO80EENSG00000169592.10588.73140780.46560-0.406701.900901.31620HepG2HNRNPK
INO80EENSG00000169592.101486.369101249.113900.250802.048901.45800HepG2HNRNPL
INO80EENSG00000169592.101026.95510785.392900.386804.248303.51010HepG2HNRNPU
INO80EENSG00000169592.101035.86120802.246800.368603.996103.13140HepG2ILF2
INO80EENSG00000169592.101046.43350787.541400.410002.228001.34050HepG2KHSRP
INO80EENSG00000169592.101685.188901218.891000.467205.092404.01950HepG2MSI2
INO80EENSG00000169592.101249.20430775.581500.6876013.2050012.18730HepG2PTBP1
INO80EENSG00000169592.101697.841801378.046500.301005.042104.28960HepG2PUM1
INO80EENSG00000169592.10359.00030779.95190-1.119404.426203.54520HepG2RAVER1
INO80EENSG00000169592.101039.34480762.246200.447204.418003.58200HepG2RBM25
INO80EENSG00000169592.101062.19810863.085800.299402.205701.71160HepG2NELFE
INO80EENSG00000169592.10485.21000766.78520-0.660202.247001.39310HepG2RPS10
INO80EENSG00000169592.101068.42210699.406400.6112011.046509.89350HepG2SAFB2
INO80EENSG00000169592.10521.63210880.17310-0.754808.250707.09310HepG2SF3B1
INO80EENSG00000169592.10956.61220815.591000.230002.018901.45600HepG2SMN1
INO80EENSG00000169592.101296.117001617.33820-0.319404.626104.02680HepG2SRFBP1
INO80EENSG00000169592.10615.22730842.74980-0.454003.077002.58530HepG2SRSF1
INO80EENSG00000169592.10672.32980947.14990-0.494402.935801.90100HepG2SRSF3
INO80EENSG00000169592.101015.462601281.75170-0.336003.222002.55500HepG2SRSF5
INO80EENSG00000169592.101061.123801404.18520-0.404105.996705.29660HepG2SSB
INO80EENSG00000169592.101682.950801457.647900.207302.547601.94670HepG2SUCLG1
INO80EENSG00000169592.10882.22510696.014500.341902.689001.86380HepG2TIA1
INO80EENSG00000169592.101118.17260769.986600.538108.640007.72980HepG2TRIM56
INO80EENSG00000169592.101260.91520480.028801.3932024.8932022.73730HepG2UCHL5
INO80EENSG00000169592.101077.79240744.009400.534602.779601.77320HepG2UPF2
INO80EENSG00000169592.101129.50900799.980100.497603.448602.64370HepG2XRN2
INO80EENSG00000169592.101754.011501248.040000.4909011.2477010.32800HepG2ZNF622
INO80EENSG00000169592.101944.125901230.709200.659508.766407.81750K562AQR
INO80EENSG00000169592.101607.468501957.61290-0.284302.741001.77030K562CELF1
INO80EENSG00000169592.101621.986301323.112300.293703.426902.71240K562DDX47
INO80EENSG00000169592.101298.95200971.990100.418205.210004.26780K562EIF2S2
INO80EENSG00000169592.10846.62910620.548200.448103.543202.61760K562EIF4A3
INO80EENSG00000169592.10905.85400700.736900.370302.618001.79370K562FIP1L1
INO80EENSG00000169592.1093.98370304.67960-1.6968014.4146012.51450K562G3BP2
INO80EENSG00000169592.10831.896001081.78470-0.378903.649902.34800K562GLRX3
INO80EENSG00000169592.101645.025901295.224200.344803.085902.29050K562GRSF1
INO80EENSG00000169592.10345.75820491.36840-0.507002.976101.69450K562HNRNPK
INO80EENSG00000169592.10927.69450576.377800.686506.163404.69940K562HNRNPM
INO80EENSG00000169592.101441.85560950.033900.601806.713905.48480K562HSPD1
INO80EENSG00000169592.10892.47420636.675000.487204.628802.58160K562LSM11
INO80EENSG00000169592.10728.43120517.087600.494304.260903.21350K562MAGOH
INO80EENSG00000169592.10759.234301128.72780-0.572103.997802.88000K562NAA15
INO80EENSG00000169592.10979.08910703.006400.477803.564501.87080K562NUSAP1
INO80EENSG00000169592.10762.883101068.50830-0.486103.595402.64670K562PCBP3
INO80EENSG00000169592.10601.83210819.54940-0.445504.049103.07510K562POLR2G
INO80EENSG00000169592.101119.03590795.491900.492204.455703.37870K562PPIG
INO80EENSG00000169592.10885.64880640.171200.468203.839402.74860K562PSIP1
INO80EENSG00000169592.10632.45010502.392400.332002.211201.60700K562PTBP1
INO80EENSG00000169592.10973.690301343.38540-0.464304.177903.53110K562PUS1
INO80EENSG00000169592.10967.539901308.82160-0.435905.241204.44720K562RBM15
INO80EENSG00000169592.10779.26070481.665700.694007.342605.88820K562RBM22
INO80EENSG00000169592.10805.49620553.695200.540704.730803.28360K562SRFBP1
INO80EENSG00000169592.10706.26060492.526200.519904.539703.63760K562SRSF1
INO80EENSG00000169592.10641.13910465.188800.462703.310402.14270K562SRSF5
INO80EENSG00000169592.10675.52230498.438200.438502.977602.24370K562TARDBP
INO80EENSG00000169592.10765.56930480.807900.671005.098203.93590K562TIA1
INO80EENSG00000169592.10668.93380471.887500.503303.860302.53740K562TRA2A
INO80EENSG00000169592.10848.29940654.152500.374802.561101.65820K562TRIM56
INO80EENSG00000169592.101222.323601462.92620-0.259202.703501.44910K562TROVE2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for INO80E is not available on ENCORE database.





26 RBPs can affect the splicing of INO80E :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEINO80EENSG00000169592.10chr16+3001253230015978300122493001236130016541300170950.408000.001490.09948includedHepG2G3BP1
SEINO80EENSG00000169592.10chr16+300127343001285130012249300123613001654130017114-0.330000.000320.00827excludedK562SRSF1
SEINO80EENSG00000169592.10chr16+300081283000818130007867300079383001207830012157-0.082000.000920.01968excludedK562SF3B4
SEINO80EENSG00000169592.10chr16+300125323001285130012249300123613001654130016644-0.304000.000270.02197excludedHepG2RBM22
SEINO80EENSG00000169592.10chr16+3001273430012851300122493001236130016541300171140.135000.000000.00000includedHepG2U2AF1
SEINO80EENSG00000169592.10chr16+3000812830008181300078673000793830012078300121570.052000.002100.03794includedHepG2U2AF1
SEINO80EENSG00000169592.10chr16+300158883001597830012532300128513001654130017083-0.061000.007020.09853excludedHepG2U2AF1
SEINO80EENSG00000169592.10chr16+300125323001597830012249300123613001654130017095-0.395000.001140.03508excludedK562AKAP8L
SEINO80EENSG00000169592.10chr16+3001273430012851300122493001236130016541300171140.377000.000000.00000includedHepG2HNRNPK
SEINO80EENSG00000169592.10chr16+300127343001285130012249300123613001654130017114-0.336000.000060.00979excludedHepG2DDX59
SEINO80EENSG00000169592.10chr16+3000812830008181300078673000793830012078300121570.084000.000000.00047includedHepG2AKAP1
SEINO80EENSG00000169592.10chr16+300127343001285130012249300123613001654130017114-0.136000.002530.02671excludedK562AQR
SEINO80EENSG00000169592.10chr16+300127343001285130012249300123613001654130017114-0.107000.000090.02116excludedK562NSUN2
SEINO80EENSG00000169592.10chr16+3000812830008181300078673000793830012078300121570.053000.002210.08079includedHepG2SFPQ
SEINO80EENSG00000169592.10chr16+3001273430012851300122493001236130016541300171140.240000.000660.03687includedHepG2PTBP1
SEINO80EENSG00000169592.10chr16+300127343001285130012249300123613001654130017114-0.182000.003180.07505excludedHepG2SF3A3
SEINO80EENSG00000169592.10chr16+300081283000818130007867300079383001207830012157-0.225000.000000.00000excludedHepG2SF3A3
SEINO80EENSG00000169592.10chr16+3000812830008181300078673000793830012078300121570.097000.000000.00015includedHepG2IGF2BP3
SEINO80EENSG00000169592.10chr16+300127343001285130012249300123613001654130017114-0.137000.001760.05780excludedK562HNRNPU
SEINO80EENSG00000169592.10chr16+300081283000822330007867300079383001207830012157-0.098000.000790.02280excludedK562RBM15
SEINO80EENSG00000169592.10chr16+300125323001597830012249300123613001654130017095-0.411000.001340.03406excludedK562RBM15
SEINO80EENSG00000169592.10chr16+300081283000818130007867300079383001207830012157-0.081000.003190.09235excludedHepG2HNRNPC
SEINO80EENSG00000169592.10chr16+3001273430012851300122493001236130016541300171140.320000.000170.03277includedHepG2KHSRP
SEINO80EENSG00000169592.10chr16+3000812830008181300078673000793830012078300121570.089000.000230.03965includedHepG2KHSRP
SEINO80EENSG00000169592.10chr16+300127343001285130012249300123613001654130017114-0.511000.000000.00000excludedK562HNRNPC
SEINO80EENSG00000169592.10chr16+300081283000818130007867300079383001207830012157-0.066000.000250.00598excludedK562HNRNPC
A3SSINO80EENSG00000169592.10chr16+300125323001285130012734300128513001231430012361-0.120000.000030.00445shorterHepG2HNRNPK
A3SSINO80EENSG00000169592.10chr16+3001253230012851300127343001285130012249300123610.180000.000050.04011longerHepG2SUPV3L1
A3SSINO80EENSG00000169592.10chr16+300125323001285130012734300128513001231430012361-0.152000.000440.04570shorterHepG2SRSF1
A3SSINO80EENSG00000169592.10chr16+300125323001285130012734300128513001231430012361-0.109000.000140.01776shorterHepG2RBM22
A3SSINO80EENSG00000169592.10chr16+300125323001285130012734300128513001231430012361-0.076000.000000.00007shorterHepG2U2AF1
A3SSINO80EENSG00000169592.10chr16+3001253230012851300127343001285130012314300123610.257000.000010.00467longerHepG2UCHL5
RIINO80EENSG00000169592.10chr16+3000756430007938300075643000771230007867300079380.115000.000000.00001includedK562SF3B4
RIINO80EENSG00000169592.10chr16+3000756430007938300075643000771230007867300079380.097000.000000.00002includedHepG2SF3A3
RIINO80EENSG00000169592.10chr16+3000756430007938300075643000771230007867300079380.054000.000000.00001includedHepG2U2AF2
RIINO80EENSG00000169592.10chr16+3000756430007938300075643000771230007867300079380.056000.005830.06000includedHepG2PRPF8
RIINO80EENSG00000169592.10chr16+3000756430007938300075643000771230007867300079380.067000.000040.00178includedHepG2IGF2BP3
RIINO80EENSG00000169592.10chr16+3000756430007938300075643000771230007867300079380.104000.000000.00000includedHepG2MATR3
RIINO80EENSG00000169592.10chr16+3000756430007938300075643000771230007867300079380.071000.000300.00977includedHepG2SRSF1
RIINO80EENSG00000169592.10chr16+3000756430007938300075643000771230007867300079380.135000.000000.00000includedHepG2U2AF1
RIINO80EENSG00000169592.10chr16+3000756430007938300075643000771230007867300079380.103000.000000.00001includedHepG2TIAL1
RIINO80EENSG00000169592.10chr16+3000756430007938300075643000771230007867300079380.063000.000010.00023includedHepG2NCBP2
RIINO80EENSG00000169592.10chr16+3000756430007938300075643000771230007867300079380.084000.000020.00034includedHepG2SF3B4
RIINO80EENSG00000169592.10chr16+3000756430007938300075643000771230007867300079380.109000.000000.00000includedHepG2RBM22
RIINO80EENSG00000169592.10chr16+3000756430007938300075643000771230007867300079380.054000.000150.00273includedHepG2HNRNPK
RIINO80EENSG00000169592.10chr16+3000756430007938300075643000771230007867300079380.258000.000000.00000includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for INO80E is not avaliable on ENCORE database.