TM9SF1

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TM9SF1	ENSG00000100926.14	6.98	9.56	8.27	ENCSR000AEF
HepG2	TM9SF1	ENSG00000100926.14	81.39	83.31	82.35	ENCSR985KAT
K562	TM9SF1	ENSG00000100926.14	12.92	8.97	10.95	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TM9SF1 is not avaliable on ENCORE database.

Proteins bound to RNA

TM9SF1 RNA is bound by 31 proteins.

eCLIP assay for TM9SF1 is not avaliable on ENCORE database.

31 proteins are bound to TM9SF1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr14	24658621	24658724	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.46607	4.19039	HepG2	PTBP1
chr14	24659543	24659596	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.23026	8.72621	HepG2	PRPF8
chr14	24658883	24658925	-	3'-UTR,CDS,intron-Distal	3.28619	4.90834	HepG2	SND1
chr14	24662007	24662071	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.62533	4.92771	HepG2	RPS3
chr14	24659440	24659566	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.75292	14.08485	HepG2	PCBP2
chr14	24658949	24659016	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.74284	3.25175	K562	YBX3
chr14	24658525	24658601	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.22496	9.53321	HepG2	LARP4
chr14	24658603	24658676	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.34774	8.01516	HepG2	LARP4
chr14	24658797	24658877	-	3'-UTR,CDS,intron-Distal	4.02497	5.82787	HepG2	SND1
chr14	24658533	24658613	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.53436	14.91786	HepG2	PCBP2
chr14	24664558	24664667	-	5'-UTR,intron-Distal,intron-Proximal	4.90244	4.54356	K562	DDX3X
chr14	24664549	24664595	-	5'-UTR,intron-Distal,intron-Proximal	4.67821	46.47906	HepG2	DDX3X
chr14	24682586	24682665	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.93706	7.02609	K562	UCHL5
chr14	24664300	24664371	-	5'-UTR,intron-Distal,intron-Proximal	3.75689	5.09002	HepG2	FAM120A
chr14	24664313	24664372	-	5'-UTR,intron-Distal,intron-Proximal	4.10932	3.30705	HepG2	GTF2F1
chr14	24664688	24664745	-	5'-UTR,intron-Distal,intron-Proximal	5.23866	29.45666	HepG2	DDX3X
chr14	24664309	24664387	-	5'-UTR,intron-Distal,intron-Proximal	5.05849	9.08640	HepG2	PRPF4
chr14	24682557	24682653	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.64411	5.12765	HepG2	RBM15
chr14	24664223	24664242	-	5'-UTR,CDS,intron-Distal	4.08623	17.87929	HepG2	DDX3X
chr14	24682482	24682675	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.44592	18.34676	HepG2	NCBP2
chr14	24682556	24682669	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.13125	9.73483	HepG2	PRPF4
chr14	24664595	24664688	-	5'-UTR,intron-Distal,intron-Proximal	5.62899	81.60215	HepG2	DDX3X
chr14	24664782	24664848	-	5'-UTR,intron-Distal,intron-Proximal	7.16051	48.56329	HepG2	DDX3X
chr14	24679956	24679975	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.97183	3.01428	K562	UCHL5
chr14	24679897	24679974	-	3'-UTR,CDS,intron-Distal	4.30452	8.50824	K562	ZNF622
chr14	24661854	24661926	-	CDS,intron-Distal,intron-Proximal	4.27830	8.91885	HepG2	SND1
chr14	24662139	24662214	-	CDS,intron-Distal,intron-Proximal	5.19775	12.20513	HepG2	SND1
chr14	24680664	24680743	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.02153	15.48209	K562	UCHL5
chr14	24679548	24679583	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.84656	10.87852	HepG2	GRWD1
chr14	24681001	24681039	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.24865	3.87582	K562	ZNF622
chr14	24680883	24680968	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.48027	13.05280	K562	UCHL5
chr14	24679553	24679630	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.49816	9.05903	K562	UCHL5
chr14	24680891	24680905	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.36143	7.94477	HepG2	GRWD1
chr14	24679638	24679690	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.18072	5.04143	K562	GRWD1
chr14	24679859	24679975	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.24030	9.28523	K562	PUM1
chr14	24679876	24679974	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.78859	7.01786	K562	GRWD1
chr14	24680745	24680811	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.60819	8.10543	K562	UCHL5
chr14	24659786	24659826	-	CDS,intron-Distal,intron-Proximal	3.77986	4.67599	HepG2	SND1
chr14	24662368	24662426	-	CDS,intron-Distal,intron-Proximal	3.42816	7.25768	HepG2	RPS3
chr14	24680623	24680676	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.77777	9.69911	HepG2	GRWD1
chr14	24679550	24679590	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.48592	3.68892	HepG2	ZNF800
chr14	24662235	24662285	-	CDS,intron-Distal	4.27827	14.91806	HepG2	SND1
chr14	24679859	24679895	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.45369	9.28811	HepG2	GRWD1
chr14	24661385	24661401	-	CDS,intron-Distal	3.70277	4.78164	HepG2	PRPF8
chr14	24679583	24679636	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.14237	13.33970	HepG2	GRWD1
chr14	24679580	24679631	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.66816	7.42278	HepG2	BCLAF1
chr14	24680905	24680958	-	5'-UTR,CDS,intron-Distal	4.00619	11.94993	HepG2	GRWD1
chr14	24679932	24679971	-	3'-UTR,CDS,intron-Distal	4.55283	10.62705	HepG2	GRWD1
chr14	24679476	24679563	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.37910	8.45537	HepG2	PRPF8
chr14	24679559	24679638	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.43594	4.83285	K562	GRWD1
chr14	24680676	24680734	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.47177	10.72476	HepG2	GRWD1
chr14	24679636	24679689	-	3'-UTR,CDS,intron-Distal	4.47349	10.69434	HepG2	GRWD1
chr14	24679858	24679882	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.22058	3.71613	K562	UCHL5
chr14	24680661	24680759	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.79186	11.03457	K562	PUM1
chr14	24679578	24679634	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.83946	9.02617	HepG2	PPIG
chr14	24680734	24680803	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.96876	8.73356	HepG2	GRWD1
chr14	24680622	24680741	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.32892	18.33118	HepG2	BCLAF1
chr14	24680626	24680745	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.27200	5.71737	K562	GRWD1
chr14	24680619	24680661	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.12041	5.45711	K562	PUM1
chr14	24682574	24682616	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.28812	5.90528	HepG2	AQR
chr14	24679553	24679580	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.78786	7.23562	HepG2	BCLAF1
chr14	24661363	24661385	-	CDS,intron-Distal,intron-Proximal	4.48246	7.02084	HepG2	PRPF8
chr14	24680885	24680950	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.21078	14.20559	HepG2	BCLAF1
chr14	24679553	24679696	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.12486	14.75590	K562	ZNF622
chr14	24679550	24679626	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.07200	3.68924	HepG2	PRPF4
chr14	24682557	24682621	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.99989	8.08771	HepG2	EFTUD2
chr14	24680885	24680948	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.08494	6.09968	K562	PUM1
chr14	24679630	24679689	-	3'-UTR,CDS,intron-Distal	4.14123	9.71209	K562	UCHL5
chr14	24680697	24680804	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.06389	14.03003	K562	ZNF622
chr14	24680624	24680684	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.88133	5.08507	K562	ZNF622
chr14	24679579	24679640	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.22251	4.28216	HepG2	UCHL5
chr14	24680722	24680800	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.34286	6.57476	HepG2	ZNF800
chr14	24662251	24662312	-	CDS,intron-Distal	4.01483	3.43975	HepG2	LIN28B
chr14	24664125	24664172	-	CDS,intron-Distal,intron-Proximal	3.57029	17.03121	HepG2	DDX3X
chr14	24664172	24664223	-	CDS,intron-Distal	3.69417	19.80460	HepG2	DDX3X
chr14	24661855	24661938	-	CDS,intron-Distal,intron-Proximal	4.01469	10.88170	HepG2	RPS3
chr14	24680746	24680800	-	3'-UTR,CDS,intron-Distal,intron-Proximal	6.04866	15.35511	HepG2	BCLAF1
chr14	24680888	24680956	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.81007	3.05347	HepG2	UCHL5
chr14	24680884	24680891	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.72103	4.24070	HepG2	GRWD1
chr14	24664094	24664198	-	CDS,intron-Distal,intron-Proximal	3.55435	15.61126	HepG2	RPS3
chr14	24680691	24680808	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.96050	5.16088	HepG2	FTO
chr14	24679859	24679884	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.41363	5.15500	HepG2	BCLAF1
chr14	24679634	24679690	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.12663	14.62064	HepG2	PPIG
chr14	24679589	24679632	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.87482	3.42508	HepG2	EIF3D
chr14	24680976	24681040	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.17643	6.11943	K562	UCHL5
chr14	24679586	24679690	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.06128	3.85461	HepG2	SRSF1
chr14	24679895	24679932	-	3'-UTR,CDS,intron-Distal	5.46629	12.24186	HepG2	GRWD1
chr14	24662347	24662416	-	CDS,intron-Distal,intron-Proximal	5.72845	8.83160	HepG2	SND1
chr14	24680881	24680956	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.53556	9.86138	K562	ZNF622
chr14	24660467	24660542	-	intron-Distal	3.75984	3.08342	HepG2	AKAP1
chr14	24678953	24679000	-	3'-UTR,intron-Distal,intron-Proximal	3.47263	7.65887	HepG2	GRWD1
chr14	24673484	24673556	-	intron-Distal	3.54105	4.39383	HepG2	HNRNPK
chr14	24673712	24673764	-	intron-Distal	4.49048	5.57507	HepG2	HNRNPL
chr14	24678943	24679073	-	3'-UTR,intron-Distal,intron-Proximal	4.14237	14.48983	HepG2	LARP4
chr14	24678888	24679069	-	3'-UTR,intron-Distal,intron-Proximal	4.07586	3.92497	HepG2	UPF1
chr14	24679030	24679108	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.74423	4.40383	K562	UCHL5
chr14	24679107	24679185	-	3'-UTR,CDS,intron-Distal	3.06878	6.50868	HepG2	BUD13
chr14	24682166	24682246	-	intron-Distal	3.36544	7.72455	HepG2	RBM15
chr14	24679097	24679175	-	3'-UTR,CDS,intron-Distal	3.20615	6.15340	HepG2	AQR
chr14	24673640	24673695	-	intron-Distal	3.55608	6.34873	HepG2	HNRNPK
chr14	24661337	24661363	-	intron-Distal,intron-Proximal	3.76666	6.66908	HepG2	PRPF8
chr14	24678855	24678970	-	3'-UTR,intron-Distal,intron-Proximal	4.09132	3.87385	HepG2	AKAP1
chr14	24682475	24682556	-	intron-Distal,intron-Proximal	3.22129	5.78613	HepG2	SRSF1
chr14	24673863	24673976	-	intron-Distal	3.59373	10.87874	HepG2	HNRNPL
chr14	24679017	24679073	-	3'-UTR,intron-Distal,intron-Proximal	3.63083	7.67372	HepG2	GRWD1
chr14	24673600	24673712	-	intron-Distal	4.85771	11.42320	HepG2	HNRNPL
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for TM9SF1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TM9SF1 is not available on ENCORE database.
127 RBPs can affect the levels of TM9SF1.

The Knockdown/knockout RNA-Seq assay for TM9SF1 is not available on ENCORE database.

127 RBPs can affect the gene expression of TM9SF1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TM9SF1	ENSG00000254692.1	442.09850	639.13670	-0.53180	3.33540	2.30400	HepG2	ABCF1
TM9SF1	ENSG00000100926.10	3175.33790	2342.44670	0.43880	10.69420	9.66140	HepG2	ACO1
TM9SF1	ENSG00000254692.1	590.99670	865.11010	-0.54970	4.22270	3.01880	HepG2	ADAR
TM9SF1	ENSG00000100926.10	6981.33260	2496.96360	1.48320	33.01090	31.43750	HepG2	AKAP1
TM9SF1	ENSG00000100926.10	2783.31090	2353.38670	0.24200	3.11530	2.30710	HepG2	AKAP8L
TM9SF1	ENSG00000100926.10	1427.50500	1888.50860	-0.40380	3.46650	1.90550	HepG2	ATP5C1
TM9SF1	ENSG00000254692.1	422.90580	576.69600	-0.44750	2.74560	1.34860	HepG2	ATP5C1
TM9SF1	ENSG00000254692.1	259.76420	628.17910	-1.27400	3.23110	2.25810	HepG2	BCLAF1
TM9SF1	ENSG00000100926.10	2081.89970	1453.57890	0.51820	6.02130	5.17820	HepG2	BOP1
TM9SF1	ENSG00000100926.10	2688.91720	1962.79670	0.45400	4.30250	3.35080	HepG2	CIRBP
TM9SF1	ENSG00000100926.10	1860.82750	2341.85890	-0.33170	6.30040	5.37030	HepG2	CKAP4
TM9SF1	ENSG00000100926.10	1900.26490	1335.66370	0.50850	2.85880	2.08090	HepG2	CNOT7
TM9SF1	ENSG00000254692.1	680.56560	887.12430	-0.38240	2.62960	1.63890	HepG2	YBX3
TM9SF1	ENSG00000254692.1	298.65560	446.45180	-0.58000	2.48420	1.46110	HepG2	CSTF2
TM9SF1	ENSG00000254692.1	787.58340	1194.04060	-0.60030	9.07940	8.04050	HepG2	CELF1
TM9SF1	ENSG00000100926.10	3106.58200	2667.14750	0.21990	3.17850	2.39300	HepG2	DAZAP1
TM9SF1	ENSG00000254692.1	121.14840	716.39870	-2.56400	8.31570	7.28020	HepG2	DDX3X
TM9SF1	ENSG00000254692.1	195.71500	475.41200	-1.28040	8.39910	6.24520	HepG2	DDX52
TM9SF1	ENSG00000100926.10	3173.65500	2055.06140	0.62690	6.43760	5.52550	HepG2	DDX6
TM9SF1	ENSG00000254692.1	273.68900	615.09250	-1.16830	1.92510	1.40120	HepG2	DDX6
TM9SF1	ENSG00000254692.1	692.49810	871.18410	-0.33120	2.57790	1.89460	HepG2	DNAJC21
TM9SF1	ENSG00000100926.10	1766.43370	1556.21290	0.18270	2.02920	1.45420	HepG2	DNAJC2
TM9SF1	ENSG00000254692.1	667.07810	863.35390	-0.37210	2.21310	1.61710	HepG2	DNAJC2
TM9SF1	ENSG00000100926.10	2116.70450	1379.56870	0.61750	7.13840	5.72980	HepG2	EEF2
TM9SF1	ENSG00000100926.10	1574.80800	1149.98670	0.45350	3.96820	2.63610	HepG2	EFTUD2
TM9SF1	ENSG00000100926.10	1403.04520	1975.00550	-0.49330	4.42350	3.68310	HepG2	EIF2S1
TM9SF1	ENSG00000254692.1	87.43840	591.60990	-2.75830	9.39140	8.33730	HepG2	EIF2S1
TM9SF1	ENSG00000100926.10	1365.94850	1656.05800	-0.27790	2.30470	1.31690	HepG2	EIF3G
TM9SF1	ENSG00000100926.10	3054.02520	2182.33520	0.48470	3.98420	3.22110	HepG2	EIF4A3
TM9SF1	ENSG00000100926.10	2052.99390	2631.51600	-0.35820	5.53460	4.41920	HepG2	EIF4G1
TM9SF1	ENSG00000254692.1	706.05600	1213.30050	-0.78110	5.65190	4.51080	HepG2	EIF4G2
TM9SF1	ENSG00000100926.10	1447.95250	1813.39730	-0.32470	2.55160	1.50310	HepG2	ESF1
TM9SF1	ENSG00000100926.10	1272.79710	1000.97360	0.34650	3.23450	1.95690	HepG2	FAM120A
TM9SF1	ENSG00000254692.1	266.35470	411.53960	-0.62770	2.50240	1.39370	HepG2	FAM120A
TM9SF1	ENSG00000100926.10	1144.28400	1652.13200	-0.52990	4.33050	2.76900	HepG2	FKBP4
TM9SF1	ENSG00000100926.10	988.68540	1575.17910	-0.67190	9.76760	8.33830	HepG2	FUBP3
TM9SF1	ENSG00000100926.10	2830.30770	2202.72620	0.36160	2.89800	2.18930	HepG2	FXR1
TM9SF1	ENSG00000100926.10	2494.49020	1645.82760	0.59980	6.14970	4.60750	HepG2	GNB2L1
TM9SF1	ENSG00000100926.10	2375.25320	1763.21380	0.42980	4.62460	3.74380	HepG2	HNRNPC
TM9SF1	ENSG00000254692.1	561.67020	869.94330	-0.63120	9.80800	8.56240	HepG2	HNRNPF
TM9SF1	ENSG00000100926.10	2805.06110	2429.49290	0.20730	3.38830	2.64910	HepG2	HNRNPL
TM9SF1	ENSG00000254692.1	323.96280	445.24840	-0.45880	2.44740	1.55180	HepG2	HNRNPM
TM9SF1	ENSG00000100926.10	1507.82800	1751.55840	-0.21620	2.26190	1.70850	HepG2	HNRNPU
TM9SF1	ENSG00000254692.1	480.55830	971.80320	-1.01600	10.57790	9.45650	HepG2	HNRNPU
TM9SF1	ENSG00000254692.1	407.73540	79.41770	2.36000	9.90620	6.33080	HepG2	HNRNPUL1
TM9SF1	ENSG00000254692.1	167.74680	66.66560	1.33120	4.82030	3.48080	HepG2	KIF1C
TM9SF1	ENSG00000100926.10	3275.51000	2591.90140	0.33760	2.01660	1.31540	HepG2	LARP4
TM9SF1	ENSG00000254692.1	495.60260	693.70940	-0.48510	2.91110	1.74730	HepG2	LARP7
TM9SF1	ENSG00000100926.10	2209.91150	1692.91370	0.38440	3.19290	1.88810	HepG2	LIN28B
TM9SF1	ENSG00000100926.10	3051.67570	2203.49900	0.46970	4.34840	3.52880	HepG2	MAGOH
TM9SF1	ENSG00000254692.1	101.52860	659.58440	-2.69970	8.66620	7.52020	HepG2	MAGOH
TM9SF1	ENSG00000100926.10	3160.65850	2215.69480	0.51240	4.58200	3.78770	HepG2	MATR3
TM9SF1	ENSG00000254692.1	98.38350	663.34900	-2.75330	8.55400	7.49530	HepG2	MATR3
TM9SF1	ENSG00000254692.1	713.01260	481.95720	0.56490	2.54680	1.53440	HepG2	METAP2
TM9SF1	ENSG00000100926.10	2375.45150	1710.42620	0.47370	4.99970	3.93630	HepG2	MSI2
TM9SF1	ENSG00000100926.10	2911.56840	2267.77560	0.36040	2.63660	2.01700	HepG2	NCBP2
TM9SF1	ENSG00000254692.1	173.24960	679.03390	-1.97060	6.25960	5.32300	HepG2	NCBP2
TM9SF1	ENSG00000254692.1	354.84820	627.28890	-0.82190	7.97870	5.60100	HepG2	NIP7
TM9SF1	ENSG00000100926.10	3067.81230	2644.75110	0.21400	2.19570	1.51550	HepG2	NOL12
TM9SF1	ENSG00000254692.1	642.68450	1272.91830	-0.98600	9.16280	7.80330	HepG2	NOL12
TM9SF1	ENSG00000254692.1	45.51410	653.29700	-3.84340	20.97740	17.88580	HepG2	NONO
TM9SF1	ENSG00000254692.1	446.61610	91.68320	2.28420	9.85110	6.09270	HepG2	NPM1
TM9SF1	ENSG00000100926.10	1774.45370	1220.98400	0.53920	2.79530	1.90310	HepG2	PABPC1
TM9SF1	ENSG00000254692.1	70.91240	416.05700	-2.55270	2.67890	1.80840	HepG2	PABPC1
TM9SF1	ENSG00000100926.10	790.63010	2019.09080	-1.35260	21.63850	19.67630	HepG2	PABPC4
TM9SF1	ENSG00000254692.1	146.48480	604.99650	-2.04620	5.09600	4.12790	HepG2	PABPC4
TM9SF1	ENSG00000254692.1	652.23200	961.97580	-0.56060	5.51190	4.37390	HepG2	PARN
TM9SF1	ENSG00000254692.1	280.56230	697.36010	-1.31360	8.00650	7.06140	HepG2	PCBP1
TM9SF1	ENSG00000100926.10	1195.32440	1804.74010	-0.59440	4.00610	2.76730	HepG2	PCBP2
TM9SF1	ENSG00000254692.1	501.79700	799.68950	-0.67230	4.31040	3.03150	HepG2	PCBP2
TM9SF1	ENSG00000254692.1	447.85260	866.77870	-0.95260	12.29560	10.80970	HepG2	PPIL4
TM9SF1	ENSG00000100926.10	778.56180	1456.97010	-0.90410	23.14870	21.30110	HepG2	PRPF4
TM9SF1	ENSG00000254692.1	357.06390	618.50120	-0.79260	2.92990	2.13630	HepG2	PRPF4
TM9SF1	ENSG00000100926.10	1188.67850	1531.00880	-0.36510	2.69620	1.89770	HepG2	PRPF8
TM9SF1	ENSG00000254692.1	207.19280	548.10590	-1.40350	2.48520	1.71780	HepG2	PRPF8
TM9SF1	ENSG00000254692.1	269.12950	709.68170	-1.39890	4.23210	3.58710	HepG2	PTBP1
TM9SF1	ENSG00000254692.1	767.89630	1215.16540	-0.66220	8.03540	7.09040	HepG2	PUF60
TM9SF1	ENSG00000100926.10	3962.29280	2680.17520	0.56390	22.94150	21.57310	HepG2	PUM1
TM9SF1	ENSG00000254692.1	769.46090	1290.01450	-0.74550	5.84140	5.04450	HepG2	PUM1
TM9SF1	ENSG00000100926.10	1623.82180	2303.94650	-0.50470	8.48210	7.47840	HepG2	QKI
TM9SF1	ENSG00000254692.1	380.09830	768.40730	-1.01550	5.71000	4.86010	HepG2	QKI
TM9SF1	ENSG00000254692.1	557.89690	771.75520	-0.46810	1.90190	1.30610	HepG2	RAVER1
TM9SF1	ENSG00000254692.1	332.19770	87.12290	1.93080	4.37750	2.02120	HepG2	RBM17
TM9SF1	ENSG00000100926.10	2312.15080	3092.64450	-0.41960	7.44890	6.69560	HepG2	RBM22
TM9SF1	ENSG00000254692.1	324.40450	697.45290	-1.10430	6.39270	5.40670	HepG2	RBM25
TM9SF1	ENSG00000254692.1	298.90840	836.47340	-1.48460	12.66970	10.54070	HepG2	RBM27
TM9SF1	ENSG00000254692.1	345.62790	76.66550	2.17250	4.97220	2.66090	HepG2	RBM39
TM9SF1	ENSG00000254692.1	222.29950	789.73140	-1.82890	9.84400	8.93910	HepG2	NELFE
TM9SF1	ENSG00000254692.1	233.63070	735.66570	-1.65480	4.40000	3.64650	HepG2	RECQL
TM9SF1	ENSG00000254692.1	430.11820	707.23630	-0.71750	6.08480	3.16580	HepG2	RPL23A
TM9SF1	ENSG00000100926.10	2013.78900	2483.94160	-0.30270	2.70750	2.02940	HepG2	RPLP0
TM9SF1	ENSG00000254692.1	544.91430	937.27240	-0.78240	2.08890	1.48570	HepG2	RPLP0
TM9SF1	ENSG00000254692.1	460.43550	758.03250	-0.71930	4.56590	3.36160	HepG2	RPS10
TM9SF1	ENSG00000254692.1	368.36250	771.49840	-1.06650	10.23740	8.78150	HepG2	RPS2
TM9SF1	ENSG00000100926.10	1198.42140	1514.46220	-0.33770	2.15210	1.45090	HepG2	RRP9
TM9SF1	ENSG00000254692.1	207.18370	542.15060	-1.38780	3.14780	2.31730	HepG2	RRP9
TM9SF1	ENSG00000100926.10	2359.17770	1559.85560	0.59680	16.84080	15.44750	HepG2	SAFB2
TM9SF1	ENSG00000254692.1	585.53390	865.46060	-0.56370	1.99490	1.43320	HepG2	SAFB2
TM9SF1	ENSG00000254692.1	208.17770	84.30370	1.30400	3.39190	1.85030	HepG2	SF1
TM9SF1	ENSG00000254692.1	132.28860	198.65300	-0.58660	1.93190	1.36580	HepG2	SF3A3
TM9SF1	ENSG00000254692.1	146.39830	738.70580	-2.33510	8.54100	7.59100	HepG2	SF3B4
TM9SF1	ENSG00000254692.1	476.74670	1165.28290	-1.28940	25.61260	23.89810	HepG2	SLBP
TM9SF1	ENSG00000254692.1	601.22060	1009.31860	-0.74740	8.34940	7.32650	HepG2	SMN1
TM9SF1	ENSG00000254692.1	454.28820	786.70320	-0.79220	6.22450	4.74230	HepG2	SMNDC1
TM9SF1	ENSG00000254692.1	326.78690	750.85930	-1.20020	12.72210	9.50650	HepG2	SND1
TM9SF1	ENSG00000254692.1	270.91720	75.14590	1.85000	4.06390	2.40240	HepG2	SNRNP200
TM9SF1	ENSG00000100926.10	2529.09820	1589.78760	0.66970	4.73580	3.70110	HepG2	SNRNP70
TM9SF1	ENSG00000100926.10	3086.76940	3492.96650	-0.17840	2.41590	1.93680	HepG2	SRFBP1
TM9SF1	ENSG00000100926.10	1849.18720	2311.69720	-0.32210	4.63820	4.06540	HepG2	SRSF1
TM9SF1	ENSG00000100926.10	936.63600	1537.47680	-0.71500	6.49540	4.90520	HepG2	SRSF3
TM9SF1	ENSG00000100926.10	2117.22860	2492.88290	-0.23560	2.74440	2.12010	HepG2	SRSF5
TM9SF1	ENSG00000254692.1	296.95780	1199.87400	-2.01460	62.75520	60.33790	HepG2	SRSF5
TM9SF1	ENSG00000100926.10	1536.50530	1880.62800	-0.29160	3.88800	3.25610	HepG2	SRSF9
TM9SF1	ENSG00000100926.10	1216.33550	3032.61420	-1.31800	71.80810	70.09650	HepG2	SSB
TM9SF1	ENSG00000254692.1	635.78020	1364.52300	-1.10180	7.15300	6.23350	HepG2	SUCLG1
TM9SF1	ENSG00000254692.1	282.78740	435.74620	-0.62380	4.74510	3.52920	HepG2	SUPT6H
TM9SF1	ENSG00000254692.1	492.70290	707.71160	-0.52240	1.95950	1.37570	HepG2	SUPV3L1
TM9SF1	ENSG00000100926.10	1715.91350	2077.64770	-0.27600	3.14650	2.55360	HepG2	TAF15
TM9SF1	ENSG00000100926.10	1745.57250	1407.16370	0.31080	2.35300	1.67740	HepG2	TARDBP
TM9SF1	ENSG00000100926.10	1595.00590	1909.28300	-0.25950	2.33640	1.56600	HepG2	TIA1
TM9SF1	ENSG00000100926.10	1347.38060	1702.06410	-0.33710	3.59100	3.03680	HepG2	TIAL1
TM9SF1	ENSG00000254692.1	334.46800	944.45940	-1.49760	16.77130	15.72750	HepG2	TIAL1
TM9SF1	ENSG00000254692.1	315.38330	952.71860	-1.59490	14.10940	12.97660	HepG2	TRIM56
TM9SF1	ENSG00000254692.1	644.50430	1187.26750	-0.88140	4.34690	3.22020	HepG2	TUFM
TM9SF1	ENSG00000254692.1	331.33540	552.04460	-0.73650	6.18440	5.26230	HepG2	U2AF1
TM9SF1	ENSG00000254692.1	436.91660	87.67380	2.31700	2.44090	1.52190	HepG2	U2AF2
TM9SF1	ENSG00000254692.1	462.21400	1256.77130	-1.44310	4.41860	3.34350	HepG2	UBE2L3
TM9SF1	ENSG00000100926.10	770.18770	1167.19870	-0.59980	5.88260	4.76680	HepG2	UCHL5
TM9SF1	ENSG00000254692.1	222.48010	417.98710	-0.90980	2.61980	1.88210	HepG2	UCHL5
TM9SF1	ENSG00000100926.10	1365.90100	1809.17420	-0.40550	2.31620	1.40390	HepG2	UPF2
TM9SF1	ENSG00000254692.1	291.83670	181.07270	0.68850	2.50920	1.50460	HepG2	UTP18
TM9SF1	ENSG00000100926.10	2333.06820	1988.20080	0.23070	2.99830	2.37990	HepG2	UTP3
TM9SF1	ENSG00000254692.1	296.37700	170.08900	0.80100	2.37490	1.81050	HepG2	UTP3
TM9SF1	ENSG00000100926.10	1232.99480	1712.91470	-0.47430	2.71530	1.46670	HepG2	XRCC5
TM9SF1	ENSG00000100926.10	1365.46250	1945.09070	-0.51040	5.10470	4.12720	HepG2	XRN2
TM9SF1	ENSG00000254692.1	480.42720	696.66800	-0.53620	2.05050	1.41860	HepG2	XRN2
TM9SF1	ENSG00000100926.10	1098.90340	1740.32800	-0.66330	5.42810	3.54400	HepG2	ZRANB2
TM9SF1	ENSG00000254692.1	358.92850	770.98450	-1.10300	11.04080	8.36690	HepG2	ZRANB2
TM9SF1	ENSG00000100926.10	566.61380	420.83010	0.42900	2.37500	1.82490	K562	AQR
TM9SF1	ENSG00000254692.1	36.03280	121.65110	-1.75540	9.10410	7.33940	K562	BCLAF1
TM9SF1	ENSG00000254692.1	103.72990	46.72590	1.15040	3.35600	2.16400	K562	CNOT7
TM9SF1	ENSG00000100926.10	408.81150	311.57450	0.39180	2.35660	1.34230	K562	CPEB4
TM9SF1	ENSG00000254692.1	30.89700	92.29040	-1.57870	5.05320	3.56000	K562	CSTF2
TM9SF1	ENSG00000254692.1	46.80490	0.00000	99999.99990	6.71700	4.02560	K562	DDX24
TM9SF1	ENSG00000254692.1	33.22160	0.00000	99999.99990	4.01420	2.72990	K562	DDX3X
TM9SF1	ENSG00000254692.1	10.03280	91.65600	-3.19150	5.73050	4.84370	K562	DDX47
TM9SF1	ENSG00000254692.1	31.11600	0.00000	99999.99990	10.42600	7.68580	K562	DDX6
TM9SF1	ENSG00000100926.10	565.96650	337.18610	0.74710	8.60440	7.44190	K562	EIF2S2
TM9SF1	ENSG00000254692.1	57.35690	98.55260	-0.78090	1.96340	1.33910	K562	EIF2S2
TM9SF1	ENSG00000254692.1	10.10720	49.11020	-2.28060	3.87740	2.66310	K562	EIF3A
TM9SF1	ENSG00000254692.1	54.65020	0.00000	99999.99990	4.70510	3.63550	K562	EIF4A3
TM9SF1	ENSG00000254692.1	37.77270	0.00000	99999.99990	3.31870	2.02780	K562	EIF4B
TM9SF1	ENSG00000254692.1	71.76200	0.00000	99999.99990	10.13700	6.85650	K562	FUBP3
TM9SF1	ENSG00000254692.1	32.56390	0.00000	99999.99990	9.77590	8.71960	K562	FXR1
TM9SF1	ENSG00000254692.1	22.69530	94.21380	-2.05350	8.19310	6.84520	K562	G3BP2
TM9SF1	ENSG00000100926.10	243.58050	160.25270	0.60400	2.78440	1.98780	K562	GPKOW
TM9SF1	ENSG00000254692.1	29.53600	60.99820	-1.04630	2.44550	1.43800	K562	HNRNPA1
TM9SF1	ENSG00000254692.1	89.44980	45.59580	0.97210	2.77950	2.18120	K562	HNRNPC
TM9SF1	ENSG00000100926.10	408.24950	291.40170	0.48630	3.02320	1.91350	K562	HNRNPL
TM9SF1	ENSG00000100926.10	300.27030	211.08290	0.50840	2.28750	1.44490	K562	HNRNPM
TM9SF1	ENSG00000254692.1	16.11090	67.54920	-2.06790	3.48200	2.48170	K562	HNRNPU
TM9SF1	ENSG00000254692.1	93.86510	42.69620	1.13640	2.91190	1.45380	K562	ILF2
TM9SF1	ENSG00000254692.1	93.77780	46.15790	1.02260	3.24300	1.62790	K562	LIN28B
TM9SF1	ENSG00000254692.1	86.63410	0.00000	99999.99990	13.03380	10.48110	K562	NCBP2
TM9SF1	ENSG00000254692.1	152.09960	44.89030	1.76040	7.91920	5.84520	K562	PABPC1
TM9SF1	ENSG00000254692.1	34.98150	82.37060	-1.23550	2.39540	1.61740	K562	RBM22
TM9SF1	ENSG00000254692.1	94.92990	37.23400	1.35010	3.98690	2.79360	K562	RCC2
TM9SF1	ENSG00000254692.1	35.09080	96.64160	-1.46160	4.79990	3.72210	K562	RPS19
TM9SF1	ENSG00000254692.1	28.71430	97.85950	-1.76890	2.77930	1.92210	K562	SF3B4
TM9SF1	ENSG00000254692.1	98.93360	35.30250	1.48660	5.65680	4.04130	K562	SRFBP1
TM9SF1	ENSG00000100926.10	247.80440	180.76280	0.45500	2.11570	1.41410	K562	U2AF2
TM9SF1	ENSG00000254692.1	50.33850	97.22270	-0.94960	2.83760	1.80320	K562	UCHL5
TM9SF1	ENSG00000100926.10	448.77700	337.98180	0.40900	1.94870	1.33830	K562	UPF1
TM9SF1	ENSG00000254692.1	119.51930	23.05790	2.37380	4.18550	2.01410	K562	XPO5
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TM9SF1 is not available on ENCORE database.

3 RBPs can affect the splicing of TM9SF1 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TM9SF1	ENSG00000100926.10	chr14	-	24661376	24661562			24659247	24659859	24661853	24662475	-0.07900	0.00031	0.01028	excluded	HepG2	HNRNPK
SE	TM9SF1	ENSG00000100926.10	chr14	-	24680620	24680718			24679859	24679974	24680885	24681030	-0.05300	0.00051	0.00685	excluded	K562	AQR
MXE	TM9SF1	ENSG00000100926.10	chr14	-	24659636	24659859	24661376	24661562	24658354	24659014	24661853	24662475	-0.07100	0.00148	0.03709	2included	HepG2	HNRNPK
MXE	TM9SF1	ENSG00000100926.10	chr14	-	24663880	24664242	24679095	24679141	24661853	24662475	24679553	24679689	-0.10700	0.00098	0.03642	2included	HepG2	NCBP2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TM9SF1

General Information

Functions

Localization

Domains (AlphaFold: TM9SF1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TM9SF1 is not avaliable on ENCORE database.

31 proteins are bound to TM9SF1 RNA:

eCLIP assay for TM9SF1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TM9SF1 is not available on ENCORE database.

127 RBPs can affect the gene expression of TM9SF1 :

The Knockdown/knockout RNA-Seq assay for TM9SF1 is not available on ENCORE database.

3 RBPs can affect the splicing of TM9SF1 :

The Knockdown/knockout RNA-Seq assay for TM9SF1 is not avaliable on ENCORE database.