NDUFV3

General Information

Gene Name       : NDUFV3
Gene ID             : ENSG00000160194.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NDUFV3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NDUFV3ENSG00000160194.1721.0416.9118.98ENCSR000AEF
HepG2NDUFV3ENSG00000160194.1716.1716.7816.48ENCSR985KAT
K562NDUFV3ENSG00000160194.1745.5152.3948.95ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NDUFV3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NDUFV3 RNA is bound by 18 proteins.  







eCLIP assay for NDUFV3 is not avaliable on ENCORE database.





18 proteins are bound to NDUFV3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr214432904044329205+3'-UTR,CDS4.976628.72775K562IGF2BP1
chr214432904944329225+3'-UTR,CDS,polyA_site3.4882721.19773K562PABPC4
chr214432912944329186+3'-UTR5.146196.99100HepG2LARP4
chr214432904544329177+3'-UTR,CDS3.333005.19388K562IGF2BP2
chr214431340744313500+5'-UTR,CDS,intron-Distal,intron-Proximal4.6298411.98576HepG2NCBP2
chr214431340844313491+5'-UTR,CDS,intron-Distal4.1436620.77353K562DDX3X
chr214431340844313491+5'-UTR,CDS,intron-Distal3.455494.72399HepG2DDX3X
chr214431344144313487+5'-UTR,CDS,intron-Distal3.152185.62019K562YBX3
chr214432327344323332+CDS,intron-Distal,intron-Proximal3.039113.45280HepG2BCLAF1
chr214432326344323345+CDS,intron-Distal,intron-Proximal3.277345.12776HepG2U2AF2
chr214432397344324056+CDS,intron-Distal3.089144.62770HepG2HLTF
chr214432394744324024+CDS,intron-Distal3.337624.74886HepG2BCLAF1
chr214431347744313535+CDS,intron-Distal,intron-Proximal4.054254.45914HepG2PRPF8
chr214431707244317159+CDS,intron-Distal,intron-Proximal3.164207.47194HepG2GRWD1
chr214432427644324378+CDS,intron-Distal4.546536.03821HepG2GRWD1
chr214431703544317076+CDS,intron-Distal,intron-Proximal3.5687212.63060K562DDX3X
chr214432903044329129+CDS3.709709.99842HepG2LARP4
chr214432897444329035+CDS3.098035.51984K562UCHL5
chr214432100344321071+intron-Distal4.469575.59994HepG2XPO5
chr214432757444327633+intron-Distal4.235564.04710HepG2HNRNPC
chr214432313344323233+intron-Distal,intron-Proximal3.169374.89503HepG2KHSRP
chr214432312644323203+intron-Distal,intron-Proximal3.2970614.94658K562KHSRP
chr214432320344323229+intron-Distal,intron-Proximal3.5161111.13157K562KHSRP
chr214432642644326479+intron-Distal3.214713.84859K562NONO
chr214432866644328764+intron-Distal4.758173.28818K562LSM11
chr214432881444328898+intron-Distal,intron-Proximal3.875753.18535HepG2LSM11
chr214432880544328887+intron-Distal,intron-Proximal4.302943.65874K562LSM11
chr214432323244323278+intron-Distal,intron-Proximal3.269346.92889K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NDUFV3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NDUFV3 is not available on ENCORE database.

  • 39 RBPs can affect the levels of NDUFV3.  








The Knockdown/knockout RNA-Seq assay for NDUFV3 is not available on ENCORE database.





39 RBPs can affect the gene expression of NDUFV3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NDUFV3ENSG00000160194.13857.395201031.14620-0.266202.392601.82580HepG2ETF1
NDUFV3ENSG00000160194.13638.00080491.396500.376602.231401.60190HepG2HNRNPC
NDUFV3ENSG00000160194.13608.85380498.628400.288002.521501.81780HepG2ILF2
NDUFV3ENSG00000160194.13596.22230752.37600-0.335602.391301.68390HepG2NOL12
NDUFV3ENSG00000160194.13630.28650788.20040-0.322602.711702.16870HepG2PTBP1
NDUFV3ENSG00000160194.13710.10210861.83310-0.279402.188801.71340HepG2RBM22
NDUFV3ENSG00000160194.13588.78550877.17660-0.575107.135406.33610HepG2NELFE
NDUFV3ENSG00000160194.13650.24330816.99760-0.329402.800102.18010HepG2RECQL
NDUFV3ENSG00000160194.13528.30790397.758900.409402.548901.95650HepG2RPS19
NDUFV3ENSG00000160194.13570.13460434.721600.391103.329402.63350HepG2SAFB2
NDUFV3ENSG00000160194.13526.47190399.213700.399102.265601.41130HepG2SERBP1
NDUFV3ENSG00000160194.13732.40100973.38350-0.410405.108504.48610HepG2SRFBP1
NDUFV3ENSG00000160194.13659.52590856.52760-0.377103.583503.06200HepG2SRSF1
NDUFV3ENSG00000160194.13532.18700709.18710-0.414203.677302.97470HepG2SRSF5
NDUFV3ENSG00000160194.13523.71090696.84210-0.412104.026303.38390HepG2SRSF9
NDUFV3ENSG00000160194.13619.13220474.353100.384202.863502.35660HepG2TIAL1
NDUFV3ENSG00000160194.13396.52980281.496600.494202.472701.75500HepG2UCHL5
NDUFV3ENSG00000160194.13572.91880721.96910-0.333602.999502.27790HepG2UPF1
NDUFV3ENSG00000160194.13627.91940469.126300.420501.985201.36360HepG2XRN2
NDUFV3ENSG00000160194.13934.64320794.026200.235102.192501.68940HepG2ZNF622
NDUFV3ENSG00000160194.131128.224102134.39000-0.9198016.2310014.96890K562AQR
NDUFV3ENSG00000160194.13948.791001319.49870-0.475804.179803.10060K562BOP1
NDUFV3ENSG00000160194.13971.955001402.96510-0.529506.561605.35040K562CPSF6
NDUFV3ENSG00000160194.13809.32800990.81730-0.291902.393701.42090K562CSTF2
NDUFV3ENSG00000160194.13864.016901178.46290-0.447803.538402.49880K562EFTUD2
NDUFV3ENSG00000160194.131387.076501775.40760-0.356104.627603.72680K562EIF2S2
NDUFV3ENSG00000160194.13932.054301261.85090-0.437102.778001.73980K562EIF3D
NDUFV3ENSG00000160194.131157.261401427.56230-0.302802.085501.33840K562FMR1
NDUFV3ENSG00000160194.13953.003001210.02190-0.344502.202101.39090K562FTO
NDUFV3ENSG00000160194.131314.626201081.755900.281202.704502.10540K562FXR1
NDUFV3ENSG00000160194.131844.719602365.84730-0.359003.763702.88630K562GRSF1
NDUFV3ENSG00000160194.131253.735501601.08110-0.352803.433102.23310K562HNRNPA1
NDUFV3ENSG00000160194.13922.841001261.27060-0.450704.484903.74380K562HNRNPC
NDUFV3ENSG00000160194.13792.235101143.81170-0.529803.501702.43680K562KRR1
NDUFV3ENSG00000160194.13860.782101146.77820-0.413902.999902.21860K562PRPF8
NDUFV3ENSG00000160194.13910.444101273.98650-0.484703.665402.53690K562SF3B1
NDUFV3ENSG00000160194.131770.015602080.85260-0.233403.138302.14760K562SRPK2
NDUFV3ENSG00000160194.131519.124501198.276400.342203.093402.34910K562SRSF1
NDUFV3ENSG00000160194.13983.677701212.66800-0.301901.971701.36720K562TARDBP
NDUFV3ENSG00000160194.131828.478902182.63380-0.255403.426002.63190K562UPF1
NDUFV3ENSG00000160194.131513.892501867.62180-0.302902.760701.88370K562WDR3
NDUFV3ENSG00000160194.131659.316201942.03450-0.227002.899202.03260K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NDUFV3 is not available on ENCORE database.





41 RBPs can affect the splicing of NDUFV3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.274000.000000.00000includedK562SRSF1
SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.145000.000010.00475includedK562FTO
SENDUFV3ENSG00000160194.13chr21+443232914432438644317036443171574432897344329215-0.077000.003790.05984excludedK562SF3B4
SENDUFV3ENSG00000160194.13chr21+4432430444324386443170364431715744328973443292150.059000.000030.02261includedK562TIA1
SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.141000.000000.00000includedHepG2U2AF1
SENDUFV3ENSG00000160194.13chr21+443232914432438644317036443171574432897344329215-0.144000.000000.00000excludedK562AKAP8L
SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.118000.000010.01595includedK562UTP3
SENDUFV3ENSG00000160194.13chr21+443232914432438644317036443171574432897344329215-0.079000.000020.00414excludedHepG2HNRNPM
SENDUFV3ENSG00000160194.13chr21+443232914432438644317036443171574432897344329215-0.124000.000000.00000excludedK562WDR43
SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.270000.000000.00000includedHepG2HNRNPK
SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.083000.000000.00001includedHepG2TBRG4
SENDUFV3ENSG00000160194.13chr21+443170364431715744313374443134914432897344333414-0.069000.000930.07137excludedHepG2QKI
SENDUFV3ENSG00000160194.13chr21+443232914432438644317036443171574432897344329215-0.062000.002700.03222excludedHepG2U2AF2
SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.092000.000070.00810includedHepG2AKAP1
SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.126000.000030.01218includedK562METAP2
SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.112000.000120.06447includedK562ABCF1
SENDUFV3ENSG00000160194.13chr21+443170364431715744313374443134914432897344333414-0.093000.000020.00324excludedHepG2DDX3X
SENDUFV3ENSG00000160194.13chr21+443232914432438644317036443171574432897344329215-0.088000.000130.03366excludedK562HNRNPA1
SENDUFV3ENSG00000160194.13chr21+443170364431715744313374443134914432329144324386-0.118000.000120.03239excludedHepG2UCHL5
SENDUFV3ENSG00000160194.13chr21+443232914432438644317036443171574432897344329215-0.161000.000000.00000excludedK562PUS1
SENDUFV3ENSG00000160194.13chr21+443170364431715744313374443134914432897344333414-0.082000.000190.01672excludedHepG2NCBP2
SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.189000.000000.00000includedHepG2SFPQ
SENDUFV3ENSG00000160194.13chr21+443170364431715744313374443134914432897344333414-0.070000.001470.06883excludedHepG2PTBP1
SENDUFV3ENSG00000160194.13chr21+443232914432438644317036443171574432897344329215-0.117000.000000.00000excludedHepG2HNRNPA1
SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.198000.000000.00000includedK562GPKOW
SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.130000.000040.02466includedK562BUD13
SENDUFV3ENSG00000160194.13chr21+443232914432438644317036443171574432897344329215-0.076000.000020.00335excludedHepG2FTO
SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.096000.004200.07117includedK562U2AF1
SENDUFV3ENSG00000160194.13chr21+443232914432438644317036443171574432897344329215-0.107000.000020.00638excludedK562HNRNPM
SENDUFV3ENSG00000160194.13chr21+443232914432438644317036443171574432897344329215-0.069000.000480.03840excludedHepG2HNRNPL
SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.090000.000270.00863includedHepG2SRSF1
SENDUFV3ENSG00000160194.13chr21+443170364431715744313374443134914432897344333414-0.104000.001030.09277excludedHepG2RBFOX2
SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.082000.000820.04089includedHepG2PCBP1
SENDUFV3ENSG00000160194.13chr21+443170364431715744313374443134914432329144324386-0.054000.001990.08036excludedHepG2PCBP1
SENDUFV3ENSG00000160194.13chr21+443232914432438644317036443171574432897344329215-0.131000.000000.00000excludedK562UTP18
SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.128000.000000.00120includedK562UPF1
SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.112000.000920.01860includedK562U2AF2
SENDUFV3ENSG00000160194.13chr21+443232914432438644317036443171574432897344329215-0.133000.000000.00002excludedK562TARDBP
SENDUFV3ENSG00000160194.13chr21+443232914432438644317036443171574432897344329215-0.124000.000000.00000excludedK562RBM15
SENDUFV3ENSG00000160194.13chr21+443232914432438644317036443171574432897344329215-0.144000.000000.00000excludedK562AGGF1
SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.244000.000000.00000includedK562CPSF6
SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.121000.000510.08546includedHepG2DDX55
SENDUFV3ENSG00000160194.13chr21+443232914432438644317036443171574432897344329215-0.074000.000000.00170excludedHepG2FUBP3
SENDUFV3ENSG00000160194.13chr21+443232914432438644317036443171574432897344329215-0.084000.000030.03593excludedHepG2YBX3
SENDUFV3ENSG00000160194.13chr21+443232914432438644317036443171574432897344329215-0.128000.000000.00006excludedHepG2XRN2
SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.172000.000000.00031includedK562HNRNPK
SENDUFV3ENSG00000160194.13chr21+443232914432438644317036443171574432897344329215-0.126000.000000.00000excludedHepG2HNRNPC
SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.120000.000460.08533includedK562SAFB
SENDUFV3ENSG00000160194.13chr21+443232914432438644317036443171574432897344329215-0.135000.000050.01685excludedK562NPM1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NDUFV3 is not avaliable on ENCORE database.