PPP2R5D

General Information

Gene Name       : PPP2R5D
Gene ID             : ENSG00000112640.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PPP2R5D)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PPP2R5DENSG00000112640.1442.9040.1241.51ENCSR000AEF
HepG2PPP2R5DENSG00000112640.1471.4364.7168.07ENCSR985KAT
K562PPP2R5DENSG00000112640.1449.7264.6157.16ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PPP2R5D is not avaliable on ENCORE database.



Proteins bound to RNA
  • PPP2R5D RNA is bound by 19 proteins.  







eCLIP assay for PPP2R5D is not avaliable on ENCORE database.





19 proteins are bound to PPP2R5D RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr64297937642979425+3'-UTR4.681334.40113HepG2AKAP1
chr64297956742979599+3'-UTR3.379686.76685K562YBX3
chr64297968942979763+3'-UTR4.089457.03532HepG2UPF1
chr64297862542978736+3'-UTR,CDS,intron-Proximal4.3748816.45220K562PABPC4
chr64297909342979131+3'-UTR3.8402310.92054K562UPF1
chr64297956442979616+3'-UTR4.945859.45651HepG2LIN28B
chr64297956442979614+3'-UTR5.250578.17882K562FAM120A
chr64297905942979142+3'-UTR4.167768.31857HepG2UPF1
chr64297470042974729+3'-UTR,CDS3.117363.12941K562UCHL5
chr64297957242979625+3'-UTR4.749266.81418HepG2UPF1
chr64297610742976127+3'-UTR,CDS3.335203.65452K562BUD13
chr64297943142979526+3'-UTR5.3594334.39571K562UPF1
chr64297977942979834+3'-UTR3.875628.35027K562FAM120A
chr64298001942980064+3'-UTR5.885069.86388K562PUM2
chr64297989642979951+3'-UTR3.152254.39499K562FAM120A
chr64297996142980050+3'-UTR4.8853925.98943K562UPF1
chr64297987642979931+3'-UTR4.244753.71984K562METAP2
chr64297955742979623+3'-UTR4.783497.01394HepG2AKAP1
chr64297450342974692+3'-UTR,CDS,intron-Distal,intron-Proximal3.651156.13643K562AQR
chr64297909142979142+3'-UTR3.252293.20150HepG2AKAP1
chr64297467542974731+3'-UTR,CDS3.175086.15304K562YBX3
chr64297985442979961+3'-UTR4.6983032.67524K562UPF1
chr64297862142978680+3'-UTR,CDS3.545154.47362HepG2G3BP1
chr64297969042979754+3'-UTR6.2441235.94228K562UPF1
chr64297944742979524+3'-UTR5.6833414.22450HepG2UPF1
chr64297920142979234+3'-UTR3.979543.35877HepG2UPF1
chr64297952042979564+3'-UTR4.103716.80849K562FAM120A
chr64297892942978979+3'-UTR,CDS4.354184.95438K562YBX3
chr64297969042979730+3'-UTR3.663614.91593K562FAM120A
chr64297986242979931+3'-UTR4.706036.38589HepG2AKAP1
chr64297461942974668+3'-UTR,CDS,intron-Proximal4.684344.92499HepG2AQR
chr64297961842979767+3'-UTR4.803579.74973K562AKAP1
chr64297962542979689+3'-UTR5.127398.28148HepG2UPF1
chr64297939442979431+3'-UTR3.4892710.62751K562UPF1
chr64297952642979619+3'-UTR7.7142743.60683K562UPF1
chr64297956542979634+3'-UTR5.8274815.71422K562LIN28B
chr64297985842979896+3'-UTR3.470645.53175K562FAM120A
chr64297994742980003+3'-UTR5.2625114.12074K562PUM2
chr64297493342974978+3'-UTR,CDS,intron-Proximal3.186176.00087K562YBX3
chr64297973042979779+3'-UTR4.322777.31669K562FAM120A
chr64297961942979690+3'-UTR7.7443953.11337K562UPF1
chr64297945542979520+3'-UTR3.406328.12495K562FAM120A
chr64297975442979813+3'-UTR5.4081127.00370K562UPF1
chr64297938742979441+3'-UTR4.644975.94150HepG2UPF1
chr64297986042979951+3'-UTR5.7352614.89968HepG2UPF1
chr64297963542979690+3'-UTR3.913139.39523K562FAM120A
chr64297945142979515+3'-UTR3.026943.56282HepG2AKAP1
chr64295229942952439+5'-UTR,CDS3.466816.13609HepG2NCBP2
chr64295232042952429+5'-UTR,CDS5.834747.56430K562DDX3X
chr64295234142952420+5'-UTR,CDS4.127465.65659HepG2DDX3X
chr64297433242974390+CDS,intron-Distal,intron-Proximal4.403464.25741HepG2G3BP1
chr64297453042974619+intron-Distal,intron-Proximal5.067435.58015HepG2AQR
chr64295938942959489+intron-Distal4.097134.13641K562TARDBP
chr64295266642952804+intron-Distal4.055053.57018HepG2HNRNPK
chr64295295742953021+intron-Distal4.201693.23168HepG2DDX59
chr64297722742977290+intron-Distal,intron-Proximal4.232094.19412K562EFTUD2
chr64297673042976783+intron-Proximal5.249156.40247K562SF3B4
chr64297587942975933+intron-Proximal3.472874.94119K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PPP2R5D is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PPP2R5D is not available on ENCORE database.

  • 100 RBPs can affect the levels of PPP2R5D.  








The Knockdown/knockout RNA-Seq assay for PPP2R5D is not available on ENCORE database.





100 RBPs can affect the gene expression of PPP2R5D :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PPP2R5DENSG00000112640.102118.648701671.548800.341902.709601.72140HepG2ADAR
PPP2R5DENSG00000112640.101757.840002212.72690-0.332002.986301.52730HepG2ATP5C1
PPP2R5DENSG00000112640.102041.419302474.79380-0.277703.823703.04090HepG2AUH
PPP2R5DENSG00000112640.101027.397901325.70220-0.367802.562501.69630HepG2BCLAF1
PPP2R5DENSG00000112640.101432.833601719.79210-0.263401.860901.36190HepG2BOP1
PPP2R5DENSG00000112640.101341.286502000.62200-0.576809.252607.96530HepG2CALR
PPP2R5DENSG00000112640.101831.693101471.134800.316102.210401.51440HepG2CIRBP
PPP2R5DENSG00000112640.101231.386601578.85430-0.358602.802702.11190HepG2CPSF6
PPP2R5DENSG00000112640.101588.907602019.29790-0.345803.229302.03340HepG2CPSF7
PPP2R5DENSG00000112640.101994.960902506.25370-0.329206.113205.07210HepG2DAZAP1
PPP2R5DENSG00000112640.101048.256101500.24360-0.517204.355103.40810HepG2DDX55
PPP2R5DENSG00000112640.101192.684601540.07940-0.368802.236901.67620HepG2DDX6
PPP2R5DENSG00000112640.101143.506201683.19130-0.557709.694808.44370HepG2DNAJC21
PPP2R5DENSG00000112640.101352.021101668.27640-0.303204.680403.86800HepG2DNAJC2
PPP2R5DENSG00000112640.10932.326301480.35550-0.667006.967506.05630HepG2EIF2S1
PPP2R5DENSG00000112640.101611.510402368.71300-0.555706.509205.28360HepG2EIF4G2
PPP2R5DENSG00000112640.101467.429502841.43130-0.9533036.0938034.37000HepG2ETF1
PPP2R5DENSG00000112640.10937.929701188.45520-0.341503.102401.85380HepG2FAM120A
PPP2R5DENSG00000112640.10986.982301203.11520-0.285702.149201.44960HepG2FUBP3
PPP2R5DENSG00000112640.102296.345201650.778300.476104.396303.53840HepG2FXR1
PPP2R5DENSG00000112640.10993.574401480.36800-0.575305.711004.23440HepG2GNB2L1
PPP2R5DENSG00000112640.101326.626701566.90120-0.240202.619501.66490HepG2HDGF
PPP2R5DENSG00000112640.101574.367202303.42410-0.5490011.348209.69570HepG2HNRNPA2B1
PPP2R5DENSG00000112640.101677.427802282.93910-0.4446010.398609.16970HepG2HNRNPL
PPP2R5DENSG00000112640.10902.714601707.97510-0.9199013.8231012.56210HepG2HNRNPLL
PPP2R5DENSG00000112640.101516.515901917.97310-0.338805.961104.92340HepG2ILF2
PPP2R5DENSG00000112640.101179.983301741.96420-0.561903.406902.32330HepG2MTPAP
PPP2R5DENSG00000112640.101245.283602485.20770-0.9969028.2628026.02310HepG2NOL12
PPP2R5DENSG00000112640.10780.740001377.89460-0.819605.749804.14220HepG2NONO
PPP2R5DENSG00000112640.101041.244801514.46370-0.540505.503304.46620HepG2NSUN2
PPP2R5DENSG00000112640.10895.147001513.50180-0.757708.750207.48360HepG2PABPC4
PPP2R5DENSG00000112640.101325.882201858.58600-0.487308.924507.54490HepG2PARN
PPP2R5DENSG00000112640.101905.932501596.271000.255702.896102.27900HepG2PCBP1
PPP2R5DENSG00000112640.101395.814801674.72800-0.262802.636301.91580HepG2PPIL4
PPP2R5DENSG00000112640.101620.912402038.14830-0.330504.663003.68620HepG2PRPF4
PPP2R5DENSG00000112640.101382.420801624.21060-0.232502.574102.04340HepG2PTBP1
PPP2R5DENSG00000112640.101985.886502372.40860-0.256601.975901.46090HepG2PUF60
PPP2R5DENSG00000112640.102172.563702518.48710-0.213202.913602.30870HepG2PUM1
PPP2R5DENSG00000112640.102148.600402516.60360-0.228101.908401.34540HepG2PUM2
PPP2R5DENSG00000112640.101177.348701671.66380-0.5057010.193609.13760HepG2PUS1
PPP2R5DENSG00000112640.101976.086302374.90310-0.265202.988802.45600HepG2RBM22
PPP2R5DENSG00000112640.101240.533801596.52210-0.364003.587202.82620HepG2RBM25
PPP2R5DENSG00000112640.101340.340201749.03470-0.384003.310802.21990HepG2RBM27
PPP2R5DENSG00000112640.102345.026001807.636000.375405.660304.92970HepG2NELFE
PPP2R5DENSG00000112640.101977.362701683.484700.232002.462201.87680HepG2RECQL
PPP2R5DENSG00000112640.101134.158801672.15170-0.5601012.4304011.21250HepG2SAFB2
PPP2R5DENSG00000112640.10970.330101298.51350-0.420303.274702.24890HepG2SERBP1
PPP2R5DENSG00000112640.101158.983101690.54440-0.544605.914904.91650HepG2SF3B1
PPP2R5DENSG00000112640.101607.426602274.91510-0.501109.133207.97530HepG2SLBP
PPP2R5DENSG00000112640.101230.859001881.03190-0.611904.089603.13040HepG2SNRNP70
PPP2R5DENSG00000112640.102325.461302682.35210-0.206002.705302.20700HepG2SRFBP1
PPP2R5DENSG00000112640.102787.981901765.113900.6594019.2223018.21230HepG2SRSF1
PPP2R5DENSG00000112640.102000.484702342.49260-0.227702.525101.92270HepG2SRSF5
PPP2R5DENSG00000112640.101006.776201435.97960-0.512309.430508.51840HepG2SRSF9
PPP2R5DENSG00000112640.10948.859901430.02950-0.591803.785002.37390HepG2SUB1
PPP2R5DENSG00000112640.102157.308202663.98690-0.304405.227304.41920HepG2SUCLG1
PPP2R5DENSG00000112640.101220.540401665.03940-0.448002.859501.50610HepG2SUGP2
PPP2R5DENSG00000112640.101252.013901671.88410-0.417204.267903.11200HepG2SUPT6H
PPP2R5DENSG00000112640.10941.384001493.38300-0.665706.943305.94850HepG2SUPV3L1
PPP2R5DENSG00000112640.101199.656201586.44180-0.403205.283804.55040HepG2TAF15
PPP2R5DENSG00000112640.101256.262301664.80950-0.406203.619902.80480HepG2TARDBP
PPP2R5DENSG00000112640.101193.939601824.56450-0.6118010.089609.23870HepG2TIAL1
PPP2R5DENSG00000112640.101175.905501840.80560-0.6466015.8129014.61900HepG2TRIM56
PPP2R5DENSG00000112640.101890.446802453.49220-0.376102.535001.73490HepG2UBE2L3
PPP2R5DENSG00000112640.10695.76490882.12830-0.342402.238301.55570HepG2UCHL5
PPP2R5DENSG00000112640.101524.361501876.07500-0.299504.202603.37070HepG2UPF1
PPP2R5DENSG00000112640.102295.422601811.270800.341705.600004.79670HepG2UTP3
PPP2R5DENSG00000112640.101713.083902011.34770-0.231602.998402.30420HepG2ZC3H8
PPP2R5DENSG00000112640.101157.819002063.31790-0.8336025.4843024.24590HepG2ZNF622
PPP2R5DENSG00000112640.104517.575502400.170100.9123042.0555039.88280K562AGGF1
PPP2R5DENSG00000112640.104038.107502637.530600.614409.967907.80270K562AKAP8
PPP2R5DENSG00000112640.103728.129502497.512000.577906.732305.67870K562AKAP8L
PPP2R5DENSG00000112640.104076.843502248.696700.8583016.2798015.01540K562AQR
PPP2R5DENSG00000112640.101709.678601318.253100.375002.971202.06570K562BOP1
PPP2R5DENSG00000112640.103514.767302868.249800.293203.507602.15760K562CCDC124
PPP2R5DENSG00000112640.101938.293401401.608900.467605.777404.65240K562CPSF6
PPP2R5DENSG00000112640.101813.072001501.826400.271602.393401.42700K562DDX3X
PPP2R5DENSG00000112640.103552.407802687.337500.402507.468405.90590K562DKC1
PPP2R5DENSG00000112640.101995.155501350.592100.562806.035404.64440K562EFTUD2
PPP2R5DENSG00000112640.101578.597601887.36620-0.257702.823502.09790K562EIF2S2
PPP2R5DENSG00000112640.101790.579901369.665200.386504.626002.88480K562EWSR1
PPP2R5DENSG00000112640.101254.344201595.52800-0.347102.395801.35820K562FKBP4
PPP2R5DENSG00000112640.101989.854101426.244000.480305.035703.87590K562FMR1
PPP2R5DENSG00000112640.101856.130701480.282000.326303.697201.60470K562FUBP3
PPP2R5DENSG00000112640.101860.207901463.821500.345603.249001.67040K562G3BP1
PPP2R5DENSG00000112640.10910.965601324.95210-0.540502.613101.92950K562G3BP2
PPP2R5DENSG00000112640.101639.050001338.133600.292502.256001.53840K562GPKOW
PPP2R5DENSG00000112640.101761.842802514.92140-0.513407.077505.85970K562GRSF1
PPP2R5DENSG00000112640.104037.475902650.392600.6071010.769508.82490K562KIF1C
PPP2R5DENSG00000112640.103641.449502537.152400.521205.249503.60760K562MAK16
PPP2R5DENSG00000112640.104484.882302969.122000.594903.669302.59770K562MBNL1
PPP2R5DENSG00000112640.101716.596002041.81910-0.250303.173402.30810K562MTPAP
PPP2R5DENSG00000112640.103327.796402081.147500.677106.658405.07090K562NAA15
PPP2R5DENSG00000112640.102061.216701566.765200.395604.877603.23860K562NCBP2
PPP2R5DENSG00000112640.102773.863802268.688100.289906.130705.08010K562NSUN2
PPP2R5DENSG00000112640.103719.423201931.630600.945206.014004.38060K562PABPN1
PPP2R5DENSG00000112640.101483.958001791.31000-0.271602.501001.74170K562POLR2G
PPP2R5DENSG00000112640.101685.438601314.289900.358702.602001.87450K562PRPF8
PPP2R5DENSG00000112640.101227.197201563.36700-0.349303.407102.67910K562PTBP1
PPP2R5DENSG00000112640.104910.707702476.659400.9874011.2468010.20130K562PUS1
PPP2R5DENSG00000112640.104427.944702413.286600.8755027.8083025.84190K562RBM15
PPP2R5DENSG00000112640.101831.621402436.13140-0.411503.701702.52330K562RPS3
PPP2R5DENSG00000112640.102845.416801766.710700.687502.768801.56380K562SF1
PPP2R5DENSG00000112640.103923.096602028.671200.951405.446603.53480K562SNRNP200
PPP2R5DENSG00000112640.101952.138602351.88470-0.268802.307201.36180K562SRSF4
PPP2R5DENSG00000112640.102375.531801991.678000.254202.826801.64420K562SRSF7
PPP2R5DENSG00000112640.102060.477301683.595300.291302.399601.52800K562TRIM56
PPP2R5DENSG00000112640.104054.785402511.263900.691102.964001.60980K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PPP2R5D is not available on ENCORE database.





11 RBPs can affect the splicing of PPP2R5D :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPPP2R5DENSG00000112640.10chr6+429764304297648442976104429762134297679442976965-0.155000.000250.00666excludedK562SF3B4
SEPPP2R5DENSG00000112640.10chr6+429764304297648442976104429762134297679442976965-0.527000.000000.00000excludedHepG2U2AF1
SEPPP2R5DENSG00000112640.10chr6+429751514297524442974933429750444297567242975957-0.143000.000000.00000excludedHepG2U2AF1
SEPPP2R5DENSG00000112640.10chr6+429764304297648442976104429762134297679442976965-0.773000.000000.00000excludedHepG2U2AF2
SEPPP2R5DENSG00000112640.10chr6+429751514297524442974933429750444297567242975957-0.077000.000260.00452excludedHepG2U2AF2
SEPPP2R5DENSG00000112640.10chr6+429764304297648442976104429762134297679442976965-0.116000.000000.00000excludedK562AQR
SEPPP2R5DENSG00000112640.10chr6+429764304297648442976104429762134297679442976965-0.088000.002220.07209excludedK562FXR1
SEPPP2R5DENSG00000112640.10chr6+429764304297648442976104429762134297679442976965-0.061000.007540.08480excludedK562PUS1
SEPPP2R5DENSG00000112640.10chr6+429764304297648442976104429762134297679442976965-0.251000.000000.00000excludedK562U2AF1
SEPPP2R5DENSG00000112640.10chr6+429764304297648442976104429762134297679442976965-0.145000.000060.00315excludedHepG2SF3A3
SEPPP2R5DENSG00000112640.10chr6+429764304297648442976104429762134297679442976965-0.123000.001070.06923excludedHepG2IGF2BP3
SEPPP2R5DENSG00000112640.10chr6+429764304297648442976104429762134297679442976965-0.332000.000000.00000excludedHepG2SF3B4
SEPPP2R5DENSG00000112640.10chr6+429764304297648442976104429762134297679442976965-0.511000.000000.00000excludedK562U2AF2
SEPPP2R5DENSG00000112640.10chr6+429764304297648442976104429762134297679442976965-0.164000.000000.00000excludedK562TARDBP
SEPPP2R5DENSG00000112640.10chr6+429764304297648442976104429762134297679442976965-0.098000.000210.00800excludedK562RBM15
A3SSPPP2R5DENSG00000112640.10chr6+4297837142978474429784014297847442978205429783070.060000.000000.00001longerHepG2SF3A3
A3SSPPP2R5DENSG00000112640.10chr6+4297837142978474429784014297847442978205429783070.097000.000000.00001longerK562RBM22
A3SSPPP2R5DENSG00000112640.10chr6+4297837142978474429784014297847442978205429783070.199000.000000.00000longerHepG2RBM22
MXEPPP2R5DENSG00000112640.10chr6+42976794429769654297716342977187429761044297621342978205429783070.175000.000020.000221includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PPP2R5D is not avaliable on ENCORE database.