ARPP19

General Information

Gene Name : ARPP19
Gene ID : ENSG00000128989.10
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ARPP19)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ARPP19	ENSG00000128989.10	92.64	80.82	86.73	ENCSR000AEF
HepG2	ARPP19	ENSG00000128989.10	33.67	62.79	48.23	ENCSR985KAT
K562	ARPP19	ENSG00000128989.10	41.34	40.71	41.03	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ARPP19 is not avaliable on ENCORE database.

Proteins bound to RNA

ARPP19 RNA is bound by 22 proteins.

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eCLIP assay for ARPP19 is not avaliable on ENCORE database.

22 proteins are bound to ARPP19 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr15	52843851	52843894	-	3'-UTR,intron-Distal,intron-Proximal	5.09743	64.09860	K562	PUM2
chr15	52861154	52861212	-	5'-UTR,intron-Distal,intron-Proximal	4.36960	45.47426	HepG2	DDX3X
chr15	52843365	52843413	-	3'-UTR,intron-Distal,intron-Proximal	3.89455	42.35211	K562	PUM2
chr15	52842753	52842817	-	3'-UTR,intron-Distal	6.29936	42.29363	HepG2	TIA1
chr15	52842744	52842811	-	3'-UTR,intron-Distal	3.89280	41.25681	K562	TIA1
chr15	52843427	52843510	-	3'-UTR,intron-Distal,intron-Proximal	4.40381	25.53557	HepG2	FUBP3
chr15	52861088	52861122	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.48107	23.74031	HepG2	DDX3X
chr15	52861126	52861154	-	5'-UTR,intron-Distal,intron-Proximal	5.51216	23.17024	HepG2	DDX3X
chr15	52843960	52843992	-	3'-UTR,intron-Distal,intron-Proximal	5.22905	20.51933	K562	LIN28B
chr15	52841511	52841558	-	3'-UTR,intron-Distal	3.21188	18.57833	K562	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 58 entries

eCLIP assay for ARPP19 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ARPP19 is not available on ENCORE database.
103 RBPs can affect the levels of ARPP19.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ARPP19 is not available on ENCORE database.

103 RBPs can affect the gene expression of ARPP19 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ARPP19	ENSG00000128989.6	1661.26350	5381.77360	-1.69580	139.67940	137.55250	HepG2	SSB
ARPP19	ENSG00000128989.6	1912.92070	3433.23930	-0.84380	33.34130	30.82630	K562	SRPK2
ARPP19	ENSG00000128989.6	2597.31260	4013.25320	-0.62780	25.38230	23.82820	HepG2	CKAP4
ARPP19	ENSG00000128989.6	6705.49550	4623.75140	0.53620	24.62770	23.40310	HepG2	ZNF622
ARPP19	ENSG00000128989.6	1615.27310	3276.62170	-1.02040	25.55690	22.88450	K562	METAP2
ARPP19	ENSG00000128989.6	5012.38870	3335.48940	0.58750	23.80500	22.18340	HepG2	ZC3H8
ARPP19	ENSG00000128989.6	3724.53170	5799.09880	-0.63880	22.25440	21.00670	HepG2	NELFE
ARPP19	ENSG00000128989.6	2169.65300	4092.80320	-0.91560	22.39540	20.39640	HepG2	MSI2
ARPP19	ENSG00000128989.6	1963.03970	3954.81620	-1.01050	22.96730	20.18170	K562	FIP1L1
ARPP19	ENSG00000128989.6	6516.62980	3339.06670	0.96460	21.16610	19.69300	K562	PUS1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 124 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ARPP19 is not available on ENCORE database.

23 RBPs can affect the splicing of ARPP19 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	ARPP19	ENSG00000128989.6	chr15	-	52856386	52856443			52849296	52849419	52861044	52861099	0.11900	0.00000	included	K562	SRSF1
SE	ARPP19	ENSG00000128989.6	chr15	-	52856386	52856443			52849296	52849419	52861044	52861099	0.13200	0.00107	included	K562	XRCC6
SE	ARPP19	ENSG00000128989.6	chr15	-	52861044	52861099			52849296	52849419	52861312	52861436	-0.34400	0.00000	excluded	K562	AQR
SE	ARPP19	ENSG00000128989.6	chr15	-	52856386	52856443			52849296	52849419	52861044	52861099	0.13700	0.00000	included	HepG2	NCBP2
SE	ARPP19	ENSG00000128989.6	chr15	-	52856386	52856443			52849296	52849419	52861044	52861099	0.08400	0.00002	included	HepG2	MATR3
SE	ARPP19	ENSG00000128989.6	chr15	-	52856386	52856443			52849296	52849419	52861044	52861099	0.20500	0.00000	included	HepG2	SRSF1
SE	ARPP19	ENSG00000128989.6	chr15	-	52856386	52856443			52849296	52849419	52861044	52861099	0.08100	0.00006	included	HepG2	IGF2BP3
SE	ARPP19	ENSG00000128989.6	chr15	-	52856386	52856443			52849296	52849419	52861044	52861099	0.10700	0.00000	included	K562	PTBP1
A3SS	ARPP19	ENSG00000128989.6	chr15	-	52849296	52849496			52849296	52849419	52861044	52861099	0.09500	0.00000	longer	K562	AQR
MXE	ARPP19	ENSG00000128989.6	chr15	-	52856386	52856443	52861044	52861097	52849296	52849419	52861312	52861364	-0.32200	0.00000	2included	HepG2	SRSF1

Showing 1 to 10 of 41 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ARPP19

General Information

Functions

Localization

Domains (AlphaFold: ARPP19)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ARPP19 is not avaliable on ENCORE database.

22 proteins are bound to ARPP19 RNA:

eCLIP assay for ARPP19 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ARPP19 is not available on ENCORE database.

103 RBPs can affect the gene expression of ARPP19 :

The Knockdown/knockout RNA-Seq assay for ARPP19 is not available on ENCORE database.

23 RBPs can affect the splicing of ARPP19 :

The Knockdown/knockout RNA-Seq assay for ARPP19 is not avaliable on ENCORE database.