SLC25A11

General Information

Gene Name       : SLC25A11
Gene ID             : ENSG00000108528.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC25A11)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC25A11ENSG00000108528.1312.0340.2926.16ENCSR000AEF
HepG2SLC25A11ENSG00000108528.1345.6226.8136.21ENCSR985KAT
K562SLC25A11ENSG00000108528.1341.3137.8839.59ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC25A11 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC25A11 RNA is bound by 10 proteins.  







eCLIP assay for SLC25A11 is not avaliable on ENCORE database.





10 proteins are bound to SLC25A11 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1748408474840924-3'-UTR,intron-Distal,intron-Proximal3.379574.01831HepG2AKAP1
chr1748407174840785-3'-UTR,intron-Distal4.002553.08342HepG2AKAP1
chr1748406644840751-3'-UTR,intron-Distal4.860466.81418HepG2UPF1
chr1748407854840847-3'-UTR,intron-Distal4.222843.87385HepG2AKAP1
chr1748407564840833-3'-UTR,intron-Distal4.261494.20997HepG2UPF1
chr1748408514840882-3'-UTR,intron-Distal5.832016.59792K562PABPC4
chr1748408334840931-3'-UTR,intron-Distal,intron-Proximal3.532786.60798HepG2UPF1
chr1748406824840749-3'-UTR,intron-Distal3.491913.77931K562UPF1
chr1748409074840951-3'-UTR,intron-Distal,intron-Proximal5.5060810.27311K562PABPC4
chr1748407044840733-3'-UTR,intron-Distal4.245823.65750K562YBX3
chr1748408824840907-3'-UTR,intron-Distal5.900766.59792K562PABPC4
chr1748408554840950-3'-UTR,intron-Distal,intron-Proximal3.085245.12117HepG2LARP4
chr1748431104843316-5'-UTR,CDS,intron-Distal,intron-Proximal4.5438712.55615HepG2DDX3X
chr1748431324843221-5'-UTR,CDS,intron-Distal,intron-Proximal4.8594313.46932K562DDX3X
chr1748422234842290-CDS,intron-Distal,intron-Proximal3.554255.90285HepG2PRPF8
chr1748424924842508-CDS,intron-Distal,intron-Proximal3.897754.82666HepG2DDX3X
chr1748413494841369-CDS,intron-Distal,intron-Proximal3.104995.58482K562YBX3
chr1748414964841545-CDS,intron-Distal,intron-Proximal3.602187.02805K562YBX3
chr1748424314842510-CDS,intron-Distal,intron-Proximal3.338216.97927K562DDX3X
chr1748414484841466-CDS,intron-Distal,intron-Proximal5.2045330.09921K562YBX3
chr1748411764841264-CDS,intron-Distal,intron-Proximal5.343296.15027K562EFTUD2
chr1748411874841235-CDS,intron-Distal,intron-Proximal5.684717.66684HepG2SF3A3
chr1748414874841496-CDS,intron-Distal5.0456625.24579K562YBX3
chr1748411894841324-CDS,intron-Distal,intron-Proximal5.1503321.47867HepG2EFTUD2
chr1748431084843132-CDS,intron-Distal3.443963.70637K562DDX3X
chr1748411064841163-CDS,intron-Distal4.127453.43895HepG2LARP4
chr1748422294842329-CDS,intron-Distal,intron-Proximal3.959753.74254HepG2SF3B4
chr1748414664841480-CDS,intron-Distal,intron-Proximal5.2921131.66650K562YBX3
chr1748429704843063-intron-Distal5.126928.42614HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC25A11 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC25A11 is not available on ENCORE database.

  • 69 RBPs can affect the levels of SLC25A11.  








The Knockdown/knockout RNA-Seq assay for SLC25A11 is not available on ENCORE database.





69 RBPs can affect the gene expression of SLC25A11 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC25A11ENSG00000108528.91129.01310815.026400.470002.660602.13890HepG2AKAP1
SLC25A11ENSG00000108528.9683.212001019.44020-0.577408.766707.65780HepG2AUH
SLC25A11ENSG00000108528.9264.50080382.10120-0.530703.070802.26160HepG2CALR
SLC25A11ENSG00000108528.9519.67860265.280000.970006.178205.03650HepG2CNOT7
SLC25A11ENSG00000108528.9205.98310350.19480-0.765604.987804.08820HepG2CPSF6
SLC25A11ENSG00000108528.9778.69210634.165000.296102.944902.18380HepG2DAZAP1
SLC25A11ENSG00000108528.9250.08350381.13820-0.607902.597201.71450HepG2DDX24
SLC25A11ENSG00000108528.9150.32660397.67560-1.403509.144107.43480HepG2DDX59
SLC25A11ENSG00000108528.9652.71290526.546300.309802.260701.63810HepG2DKC1
SLC25A11ENSG00000108528.9447.53460326.609300.454302.809302.10280HepG2DNAJC21
SLC25A11ENSG00000108528.9413.19330323.701200.352102.366701.75440HepG2DNAJC2
SLC25A11ENSG00000108528.9226.55380358.61070-0.662602.494701.45130HepG2AGO1
SLC25A11ENSG00000108528.9455.66060625.70650-0.457503.863902.90410HepG2EIF4G1
SLC25A11ENSG00000108528.9671.203101170.47090-0.8023016.9929015.70990HepG2ETF1
SLC25A11ENSG00000108528.9472.32130733.72700-0.635502.741801.97640HepG2FIP1L1
SLC25A11ENSG00000108528.9175.45680350.81800-0.999603.510802.36130HepG2FTO
SLC25A11ENSG00000108528.9380.92150549.25470-0.528003.987603.05140HepG2FUBP3
SLC25A11ENSG00000108528.9540.65680708.05660-0.389202.298101.48910HepG2G3BP2
SLC25A11ENSG00000108528.9243.25670396.94290-0.706504.226303.44640HepG2GPKOW
SLC25A11ENSG00000108528.9211.13110335.91180-0.669903.734102.86700HepG2NSUN2
SLC25A11ENSG00000108528.9143.62070242.50950-0.755802.949202.03250HepG2PABPC1
SLC25A11ENSG00000108528.9477.85830659.09500-0.463902.888202.15060HepG2PABPC4
SLC25A11ENSG00000108528.9508.24420772.82640-0.604607.819906.88180HepG2PCBP1
SLC25A11ENSG00000108528.9233.61150511.52300-1.1307014.7401013.17760HepG2PRPF4
SLC25A11ENSG00000108528.9167.21010413.21970-1.305209.813008.40250HepG2PRPF8
SLC25A11ENSG00000108528.9776.92440637.273200.285802.933702.32710HepG2PUM1
SLC25A11ENSG00000108528.9735.28860560.581300.391303.986303.27200HepG2PUS1
SLC25A11ENSG00000108528.9479.10670648.11090-0.435902.100201.33970HepG2RBM15
SLC25A11ENSG00000108528.9595.37730978.29350-0.7165010.292709.43530HepG2RBM22
SLC25A11ENSG00000108528.9441.88490772.94010-0.806709.757908.54790HepG2RBM25
SLC25A11ENSG00000108528.9583.25570815.14660-0.482905.239304.42560HepG2RECQL
SLC25A11ENSG00000108528.9174.42350408.73430-1.228608.888907.58710HepG2RRP9
SLC25A11ENSG00000108528.9457.44300324.465900.495404.169303.40650HepG2SAFB2
SLC25A11ENSG00000108528.9249.26750374.93220-0.588903.453002.67310HepG2SF3B1
SLC25A11ENSG00000108528.9565.41990818.70200-0.534006.132105.31000HepG2SF3B4
SLC25A11ENSG00000108528.9564.565301104.94020-0.9688023.7007022.60970HepG2SRFBP1
SLC25A11ENSG00000108528.9588.87160854.56800-0.537206.525205.87320HepG2SRSF1
SLC25A11ENSG00000108528.9197.25250403.47800-1.032406.920505.28610HepG2SRSF3
SLC25A11ENSG00000108528.9433.95410695.25400-0.680009.357708.44810HepG2SRSF9
SLC25A11ENSG00000108528.9868.56120674.085800.365604.059703.33150HepG2SUCLG1
SLC25A11ENSG00000108528.9394.84080768.17530-0.960209.275008.34440HepG2TAF15
SLC25A11ENSG00000108528.9468.45390705.78870-0.591305.985704.76470HepG2TIA1
SLC25A11ENSG00000108528.9326.79070627.45210-0.941105.180604.33600HepG2U2AF1
SLC25A11ENSG00000108528.9797.11780641.294300.313702.135701.62560K562AGGF1
SLC25A11ENSG00000108528.9503.98250902.51120-0.840609.495708.51260K562AQR
SLC25A11ENSG00000108528.91088.119901427.23010-0.391404.072102.87980K562CELF1
SLC25A11ENSG00000108528.9514.90490385.812100.416302.577401.57300K562DDX3X
SLC25A11ENSG00000108528.9302.40110432.88080-0.517503.283902.28420K562EFTUD2
SLC25A11ENSG00000108528.9282.67440419.58960-0.569802.345801.42650K562EIF3A
SLC25A11ENSG00000108528.9287.79270463.33690-0.687004.559503.19280K562EIF3D
SLC25A11ENSG00000108528.9662.29640428.542600.627905.597104.36600K562FIP1L1
SLC25A11ENSG00000108528.9275.17840426.83010-0.633304.004202.61620K562FKBP4
SLC25A11ENSG00000108528.942.74970181.00540-2.0820013.8065011.96700K562G3BP2
SLC25A11ENSG00000108528.9958.70610705.717500.441903.988502.69280K562HNRNPL
SLC25A11ENSG00000108528.9509.02940352.534800.529902.317201.47010K562HNRNPM
SLC25A11ENSG00000108528.9723.70170930.26930-0.362303.267202.29940K562HNRNPU
SLC25A11ENSG00000108528.9800.33180580.939300.462103.237502.37900K562HSPD1
SLC25A11ENSG00000108528.9297.92600492.01020-0.723703.414401.81030K562ILF2
SLC25A11ENSG00000108528.9293.05810416.48310-0.507102.891801.37540K562KHDRBS1
SLC25A11ENSG00000108528.9595.75310720.70460-0.274702.096801.38750K562MTPAP
SLC25A11ENSG00000108528.9962.527601269.64940-0.399503.171901.56410K562NOL12
SLC25A11ENSG00000108528.9619.17140426.888800.536402.537201.31400K562NONO
SLC25A11ENSG00000108528.9673.31520800.74760-0.250102.131801.46820K562NSUN2
SLC25A11ENSG00000108528.9187.63720349.23730-0.896306.570605.04480K562PCBP2
SLC25A11ENSG00000108528.9815.15620486.556200.744407.941206.39110K562PPIG
SLC25A11ENSG00000108528.9295.06170421.24660-0.513602.948502.17600K562PRPF8
SLC25A11ENSG00000108528.9979.122401266.43330-0.371202.751901.93800K562PUF60
SLC25A11ENSG00000108528.91083.554601347.08130-0.314102.780901.71010K562PUM1
SLC25A11ENSG00000108528.9142.17510226.48610-0.671802.704501.74070K562SF3B1
SLC25A11ENSG00000108528.9710.39130442.282100.683502.608401.35920K562SFPQ
SLC25A11ENSG00000108528.9242.80640416.57190-0.778802.961001.67630K562SNRNP200
SLC25A11ENSG00000108528.9571.87790809.54200-0.501406.326504.97950K562SRPK2
SLC25A11ENSG00000108528.9311.56740223.014300.482302.234801.30760K562SRSF4
SLC25A11ENSG00000108528.979.85060177.66980-1.153803.640601.87520K562TAF15
SLC25A11ENSG00000108528.961.52490181.12550-1.5577011.180009.55360K562U2AF2
SLC25A11ENSG00000108528.9533.04330755.49740-0.503206.201904.98850K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC25A11 is not available on ENCORE database.





6 RBPs can affect the splicing of SLC25A11 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
RISLC25A11ENSG00000108528.9chr17-4841448484172448414484841548484163348417240.102000.000260.00758includedHepG2PCBP2
RISLC25A11ENSG00000108528.9chr17-4841448484172448414484841548484163348417240.125000.000000.00000includedK562PUS1
RISLC25A11ENSG00000108528.9chr17-4841448484172448414484841548484163348417240.056000.000490.04926includedK562NSUN2
RISLC25A11ENSG00000108528.9chr17-4841448484172448414484841548484163348417240.077000.001950.04473includedHepG2UCHL5
RISLC25A11ENSG00000108528.9chr17-4841448484172448414484841548484163348417240.052000.001510.09689includedK562MTPAP
RISLC25A11ENSG00000108528.9chr17-4841448484172448414484841548484163348417240.091000.001180.05480includedK562BUD13

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SLC25A11 is not avaliable on ENCORE database.