NPLOC4

General Information

Gene Name       : NPLOC4
Gene ID             : ENSG00000182446.13
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: NPLOC4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NPLOC4ENSG00000182446.1330.8330.0830.45ENCSR000AEF
HepG2NPLOC4ENSG00000182446.1368.9765.7667.37ENCSR985KAT
K562NPLOC4ENSG00000182446.1349.8650.2650.06ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NPLOC4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NPLOC4 RNA is bound by 56 proteins.  







eCLIP assay for NPLOC4 is not avaliable on ENCORE database.





56 proteins are bound to NPLOC4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr177952525579525331-3'-UTR,intron-Distal3.261715.57566HepG2AKAP1
chr177956742579567482-3'-UTR,CDS,intron-Distal,intron-Proximal3.508394.23459K562PRPF8
chr177952509279525141-3'-UTR,intron-Distal4.254996.42098HepG2EIF3H
chr177956737979567446-3'-UTR,CDS,intron-Distal3.0986110.55732K562ZNF622
chr177952410079524172-3'-UTR,intron-Distal5.0725717.71792K562LIN28B
chr177952641679526466-3'-UTR,CDS,intron-Distal,intron-Proximal5.5718212.20696HepG2SF3B4
chr177952640979526463-3'-UTR,CDS,intron-Distal,intron-Proximal6.30210400.00000K562SF3B4
chr177952424179524322-3'-UTR,intron-Distal4.504474.11076HepG2ZC3H11A
chr177953256879532597-3'-UTR,5'-UTR,CDS,intron-Distal4.859807.86337HepG2GRWD1
chr177952432479524396-3'-UTR,intron-Distal4.912845.23207HepG2ZC3H11A
chr177953450579534574-3'-UTR,CDS,intron-Distal,intron-Proximal3.498515.85184K562U2AF2
chr177956313179563205-3'-UTR,CDS,intron-Distal,intron-Proximal3.4088211.33573K562DDX24
chr177956743679567454-3'-UTR,CDS,intron-Distal,intron-Proximal3.399064.76953K562DDX24
chr177952546379525567-3'-UTR,intron-Distal4.9642613.34636HepG2UPF1
chr177952555279525600-3'-UTR,intron-Distal4.4069519.72434K562UPF1
chr177952454579524591-3'-UTR,intron-Distal3.6268214.69144K562UPF1
chr177956312879563178-3'-UTR,CDS,intron-Distal,intron-Proximal3.6083010.17838K562ZNF622
chr177952580479525882-3'-UTR,intron-Distal,intron-Proximal3.061664.07982K562PCBP1
chr177956313979563171-3'-UTR,CDS,intron-Distal,intron-Proximal3.409846.32494K562UCHL5
chr177957370479573718-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.151923.95292K562AQR
chr177952426779524318-3'-UTR,intron-Distal3.266343.18660HepG2PABPN1
chr177956736679567403-3'-UTR,CDS,intron-Distal,intron-Proximal4.274449.53524K562DDX24
chr177952500279525060-3'-UTR,intron-Distal4.259979.30447HepG2UPF1
chr177953107579531148-3'-UTR,intron-Distal,intron-Proximal3.693407.19958K562IGF2BP1
chr177952580079525905-3'-UTR,intron-Distal,intron-Proximal3.6749943.55705K562UPF1
chr177952535379525378-3'-UTR,intron-Distal4.672065.67997HepG2UPF1
chr177957159079571674-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.3184212.96537K562DDX24
chr177953106879531138-3'-UTR,intron-Distal,intron-Proximal4.5823212.41496K562TARDBP
chr177953105679531114-3'-UTR,intron-Distal,intron-Proximal4.4112813.89671K562EIF4G2
chr177957376879573837-3'-UTR,5'-UTR,CDS,intron-Distal4.4823810.89658HepG2BCLAF1
chr177953603979536123-3'-UTR,CDS,intron-Distal,intron-Proximal3.1616112.77721K562DDX24
chr177953452679534571-3'-UTR,CDS,intron-Distal,intron-Proximal3.998023.33054K562U2AF1
chr177952585779525906-3'-UTR,intron-Distal4.3293513.79162HepG2AKAP1
chr177952487279524927-3'-UTR,intron-Distal5.5351019.33267K562UPF1
chr177953259779532632-3'-UTR,5'-UTR,CDS,intron-Distal4.890298.64103HepG2GRWD1
chr177952480079524840-3'-UTR,intron-Distal6.5971422.20423K562UPF1
chr177957173779571754-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.974295.07449K562DDX24
chr177952517079525202-3'-UTR,intron-Distal4.5108413.44564K562UPF1
chr177953443279534491-3'-UTR,CDS,intron-Distal,intron-Proximal3.298736.47139HepG2PPIG
chr177953249779532570-3'-UTR,CDS,intron-Distal,intron-Proximal3.7809611.17337HepG2PPIG
chr177955609679556133-3'-UTR,CDS,intron-Distal,intron-Proximal3.138306.34055HepG2PPIG
chr177952461479524666-3'-UTR,intron-Distal3.7595215.63754K562UPF1
chr177952615879526198-3'-UTR,intron-Distal,intron-Proximal4.062333.81597K562RBM15
chr177953247079532580-3'-UTR,CDS,intron-Distal,intron-Proximal3.8414334.15510HepG2PRPF8
chr177952487479524927-3'-UTR,intron-Distal3.903633.43975HepG2LIN28B
chr177957372179573829-3'-UTR,5'-UTR,CDS,intron-Distal3.286984.84084K562ZNF800
chr177953251479532568-3'-UTR,CDS,intron-Distal,intron-Proximal3.739995.99043HepG2GRWD1
chr177953899679539050-3'-UTR,CDS,intron-Distal,intron-Proximal4.9433912.77088HepG2PRPF8
chr177952453279524599-3'-UTR,intron-Distal3.837137.22907K562AKAP1
chr177952573179525796-3'-UTR,intron-Distal,intron-Proximal3.795038.46839HepG2AKAP1
chr177953111479531170-3'-UTR,intron-Distal,intron-Proximal4.6442914.93636K562EIF4G2
chr177953242979532478-3'-UTR,CDS,intron-Distal,intron-Proximal3.625854.88100K562AQR
chr177957372079573768-3'-UTR,5'-UTR,CDS,intron-Distal3.455797.93794HepG2BCLAF1
chr177956427079564330-3'-UTR,CDS,intron-Distal,intron-Proximal3.014297.15397HepG2PPIG
chr177952488079524938-3'-UTR,intron-Distal4.431124.55369K562LIN28B
chr177956744579567514-3'-UTR,CDS,intron-Distal,intron-Proximal5.2923320.66358K562SF3B4
chr177952441479524472-3'-UTR,intron-Distal4.2752113.90591K562UPF1
chr177957157679571634-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.032234.91547HepG2GRWD1
chr177953071879530779-3'-UTR,intron-Distal3.080684.13639HepG2ILF3
chr177952541679525460-3'-UTR,intron-Distal5.6778720.93939K562UPF1
chr177952584279525902-3'-UTR,intron-Distal3.221273.70236HepG2RBM15
chr177953238979532466-3'-UTR,CDS,intron-Distal,intron-Proximal3.142324.38249K562RBM15
chr177952455679524599-3'-UTR,intron-Distal5.027218.57616HepG2UPF1
chr177952510479525196-3'-UTR,intron-Distal5.9659717.47389HepG2UPF1
chr177952572579525800-3'-UTR,intron-Distal,intron-Proximal4.0547626.53994K562UPF1
chr177952495979525006-3'-UTR,intron-Distal4.7642516.30441K562UPF1
chr177956427079564343-3'-UTR,CDS,intron-Distal,intron-Proximal4.3023127.76894K562DDX24
chr177952623979526284-3'-UTR,intron-Distal,intron-Proximal3.872256.61524HepG2UPF1
chr177957371579573835-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.1323313.89867K562UCHL5
chr177952547779525553-3'-UTR,intron-Distal3.891369.99659HepG2AKAP1
chr177956313779563188-3'-UTR,CDS,intron-Distal,intron-Proximal3.196006.70384HepG2PPIG
chr177952511279525162-3'-UTR,intron-Distal3.6751512.57840K562TROVE2
chr177952508879525112-3'-UTR,intron-Distal3.453716.99611K562TROVE2
chr177952579979525885-3'-UTR,intron-Distal,intron-Proximal3.269529.65912HepG2DDX55
chr177953116279531224-3'-UTR,intron-Distal,intron-Proximal3.543674.90204K562TARDBP
chr177952641579526440-3'-UTR,CDS,intron-Distal,intron-Proximal4.108663.56466K562LSM11
chr177952488079524925-3'-UTR,intron-Distal4.493326.96218HepG2TROVE2
chr177952640279526448-3'-UTR,CDS,intron-Distal,intron-Proximal3.070864.00809HepG2SF3A3
chr177957377079573864-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.950198.08874K562SF3B4
chr177956730079567372-3'-UTR,CDS,intron-Distal,intron-Proximal3.535846.21987K562AQR
chr177956736379567413-3'-UTR,CDS,intron-Distal,intron-Proximal4.7880911.08513HepG2PPIG
chr177952573179525795-3'-UTR,intron-Distal,intron-Proximal3.6719711.39347HepG2UPF1
chr177953143079531494-3'-UTR,intron-Distal3.560663.25106K562HNRNPC
chr177956422579564277-3'-UTR,CDS,intron-Distal,intron-Proximal4.3396112.81328HepG2PRPF8
chr177957163479571718-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.844616.91167HepG2GRWD1
chr177956427279564341-3'-UTR,CDS,intron-Distal3.505043.05347HepG2UCHL5
chr177952426179524300-3'-UTR,intron-Distal3.505774.66086HepG2AKAP1
chr177952637879526483-3'-UTR,CDS,intron-Distal,intron-Proximal3.3377216.60079K562BUD13
chr177956313179563189-3'-UTR,CDS,intron-Distal,intron-Proximal3.851493.25843K562SRSF1
chr177952575379525779-3'-UTR,intron-Distal,intron-Proximal3.768383.66583K562AKAP1
chr177952490579524929-3'-UTR,intron-Distal3.438903.85730K562AKAP1
chr177952507079525160-3'-UTR,intron-Distal5.0075325.82487K562UPF1
chr177953251079532541-3'-UTR,CDS,intron-Distal,intron-Proximal3.7320014.14355K562PRPF8
chr177952548479525530-3'-UTR,intron-Distal3.647324.51056HepG2LSM11
chr177952501879525070-3'-UTR,intron-Distal4.9252119.69121K562UPF1
chr177955609679556131-3'-UTR,CDS,intron-Distal,intron-Proximal4.066927.88406K562DDX24
chr177953239779532510-3'-UTR,CDS,intron-Distal,intron-Proximal4.3103718.89350K562PRPF8
chr177957374879573827-3'-UTR,5'-UTR,CDS,intron-Distal3.351616.84486K562LIN28B
chr177952604779526174-3'-UTR,intron-Distal,intron-Proximal4.3683412.92252HepG2UPF1
chr177956741379567452-3'-UTR,CDS,intron-Distal3.025486.06509HepG2PPIG
chr177952609779526147-3'-UTR,intron-Distal,intron-Proximal5.052328.60994HepG2AKAP1
chr177953243879532503-3'-UTR,CDS,intron-Distal,intron-Proximal3.455555.78766HepG2RBM22
chr177952556779525601-3'-UTR,intron-Distal3.485543.38753K562FAM120A
chr177952428179524308-3'-UTR,intron-Distal4.2528910.04737K562UPF1
chr177952443079524469-3'-UTR,intron-Distal4.118604.81596K562AKAP1
chr177952579579525891-3'-UTR,intron-Distal,intron-Proximal5.1449732.76180HepG2UPF1
chr177957371479573843-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.0930730.78073K562DDX24
chr177952626279526276-3'-UTR,intron-Distal,intron-Proximal4.192143.87385HepG2AKAP1
chr177957373679573830-3'-UTR,5'-UTR,CDS,intron-Distal3.444576.51392HepG2EIF3H
chr177952425479524323-3'-UTR,intron-Distal3.054056.88236K562DDX55
chr177956320579563269-3'-UTR,CDS,intron-Distal,intron-Proximal3.7614416.40089K562DDX24
chr177956310579563162-3'-UTR,CDS,intron-Distal,intron-Proximal3.247763.40738HepG2PRPF8
chr177956731279567375-3'-UTR,CDS,intron-Distal,intron-Proximal3.048396.29405HepG2PRPF8
chr177952433679524396-3'-UTR,intron-Distal4.646246.04687K562ZC3H11A
chr177956433579564342-3'-UTR,CDS,intron-Distal4.270004.08604HepG2PPIG
chr177952462579524665-3'-UTR,intron-Distal3.078553.79014HepG2AKAP1
chr177952579979525855-3'-UTR,intron-Distal,intron-Proximal3.751593.04831K562RBM15
chr177952459979524661-3'-UTR,intron-Distal4.487086.71790K562AKAP1
chr177953904579539101-3'-UTR,CDS,intron-Distal,intron-Proximal4.455854.50960HepG2GRWD1
chr177952579679525857-3'-UTR,intron-Distal,intron-Proximal4.9303621.18914HepG2AKAP1
chr177952639679526459-3'-UTR,CDS,intron-Distal,intron-Proximal3.988415.33180HepG2U2AF1
chr177953249679532563-3'-UTR,CDS,intron-Distal,intron-Proximal3.5165710.17838K562ZNF622
chr177952516279525201-3'-UTR,intron-Distal4.456004.40113HepG2AKAP1
chr177956427279564342-3'-UTR,CDS,intron-Distal3.180507.10982HepG2GRWD1
chr177956313479563169-3'-UTR,CDS,intron-Distal,intron-Proximal3.139075.40132HepG2BCLAF1
chr177952455679524600-3'-UTR,intron-Distal4.824486.75461HepG2AKAP1
chr177953257079532631-3'-UTR,5'-UTR,CDS,intron-Distal3.3249212.20588HepG2PPIG
chr177952526879525322-3'-UTR,intron-Distal4.199838.55060HepG2UPF1
chr177952415279524202-3'-UTR,intron-Distal3.838663.02850K562YBX3
chr177952526479525308-3'-UTR,intron-Distal4.7350217.08773K562UPF1
chr177952546079525552-3'-UTR,intron-Distal5.4559839.99693K562UPF1
chr177952640679526442-3'-UTR,CDS,intron-Distal,intron-Proximal3.4269910.73941K562U2AF2
chr177952539779525452-3'-UTR,intron-Distal5.188188.99356HepG2UPF1
chr177952423979524304-3'-UTR,intron-Distal4.4308910.73972HepG2UPF1
chr177952471579524800-3'-UTR,intron-Distal5.4660240.66580K562UPF1
chr177952471379524808-3'-UTR,intron-Distal3.328303.28007HepG2NKRF
chr177952510179525162-3'-UTR,intron-Distal3.433918.22037HepG2AKAP1
chr177957371179573788-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.029546.08623HepG2BUD13
chr177958919479589239-5'-UTR,CDS,intron-Distal3.372707.38488K562YBX3
chr177960396979604104-5'-UTR,intron-Distal,intron-Proximal4.1234423.78715HepG2DDX3X
chr177959675979596828-5'-UTR,CDS,intron-Distal3.698996.41974HepG2PPIG
chr177957157379571590-5'-UTR,CDS,intron-Distal,intron-Proximal3.636025.69590K562DDX24
chr177957380979573843-5'-UTR,CDS,intron-Distal,intron-Proximal3.562487.16988HepG2PPIG
chr177958047779580519-5'-UTR,CDS,intron-Distal,intron-Proximal3.946873.46958K562YBX3
chr177960401679604117-5'-UTR,intron-Distal,intron-Proximal3.0421613.95711HepG2PPIG
chr177958920279589303-5'-UTR,CDS,intron-Distal3.5540318.30491K562DDX24
chr177959676879596806-5'-UTR,CDS,intron-Distal3.539309.46864K562UCHL5
chr177959677679596831-5'-UTR,CDS,intron-Distal3.852507.23562HepG2BCLAF1
chr177957575279575822-5'-UTR,CDS,intron-Distal,intron-Proximal3.6635910.41365HepG2PPIG
chr177958028179580372-5'-UTR,CDS,intron-Distal,intron-Proximal3.958766.24305HepG2AQR
chr177960394479604023-5'-UTR,CDS,intron-Distal4.135106.09067HepG2NCBP2
chr177960394179604046-5'-UTR,CDS,intron-Distal3.621473.40696HepG2FTO
chr177957584379575936-5'-UTR,CDS,intron-Distal,intron-Proximal4.100693.98315HepG2SF3B4
chr177957575179575782-5'-UTR,CDS,intron-Distal,intron-Proximal3.176663.71797HepG2BCLAF1
chr177958045879580506-5'-UTR,CDS,intron-Distal,intron-Proximal4.226403.48187K562RBM15
chr177960395679604066-5'-UTR,intron-Distal3.290557.63960K562UCHL5
chr177960401179604121-5'-UTR,intron-Distal,intron-Proximal3.7461615.06442K562ZNF622
chr177957581179575849-5'-UTR,CDS,intron-Distal,intron-Proximal4.064949.20662K562DDX24
chr177960394579604011-5'-UTR,CDS,intron-Distal3.714288.15127K562ZNF622
chr177959676579596831-5'-UTR,CDS,intron-Distal3.143325.33987HepG2GRWD1
chr177959674879596767-5'-UTR,CDS,intron-Distal,intron-Proximal4.957917.60619K562UCHL5
chr177958919479589301-5'-UTR,CDS,intron-Distal3.4805515.83723HepG2BCLAF1
chr177960394379604106-5'-UTR,CDS,intron-Distal,intron-Proximal3.295998.30132K562DDX3X
chr177958045079580507-5'-UTR,CDS,intron-Distal,intron-Proximal4.454415.64460HepG2GRWD1
chr177958033779580345-5'-UTR,CDS,intron-Distal,intron-Proximal4.138508.13013K562AQR
chr177960396479604014-5'-UTR,intron-Distal4.765126.54449K562RBM15
chr177960394179604010-5'-UTR,CDS,intron-Distal4.623589.64961K562DDX24
chr177957566179575763-5'-UTR,CDS,intron-Distal,intron-Proximal3.705389.75075K562AQR
chr177959673379596841-5'-UTR,CDS,intron-Distal,intron-Proximal3.037526.94569HepG2BUD13
chr177960392579603944-5'-UTR,CDS,intron-Distal3.325887.02084HepG2PRPF8
chr177959674479596776-5'-UTR,CDS,intron-Distal,intron-Proximal4.980336.13315HepG2BCLAF1
chr177958042479580509-5'-UTR,CDS,intron-Distal,intron-Proximal4.2189315.84579K562DDX24
chr177960396079604029-5'-UTR,intron-Distal3.298847.13467K562XRCC6
chr177958034179580424-5'-UTR,CDS,intron-Distal,intron-Proximal3.8905317.95593K562DDX24
chr177957380779573841-5'-UTR,CDS,intron-Distal,intron-Proximal3.220368.48432K562ZNF622
chr177957575179575839-5'-UTR,CDS,intron-Distal,intron-Proximal4.095459.05280HepG2GRWD1
chr177959676079596828-5'-UTR,CDS,intron-Distal6.2482110.14153K562DDX24
chr177960405379604111-5'-UTR,intron-Distal,intron-Proximal5.636027.63756K562DDX24
chr177957724279577320-CDS,intron-Distal,intron-Proximal5.0720522.06254K562AQR
chr177957723179577286-CDS,intron-Distal,intron-Proximal3.008887.16368HepG2PPIG
chr177957725579577286-CDS,intron-Distal,intron-Proximal3.8355713.78659K562DDX24
chr177957723079577306-CDS,intron-Distal,intron-Proximal3.3346012.03295K562BUD13
chr177957721579577241-CDS,intron-Distal,intron-Proximal4.395796.77156K562AQR
chr177957723579577255-CDS,intron-Distal,intron-Proximal3.440737.29897K562DDX24
chr177957720279577327-CDS,intron-Distal,intron-Proximal4.5835210.38579HepG2AQR
chr177957715079577296-CDS,intron-Distal,intron-Proximal3.4055113.86528HepG2PRPF8
chr177954386579543923-intron-Distal5.8446810.02215K562HNRNPM
chr177954418279544257-intron-Distal3.565624.60046HepG2CSTF2T
chr177954417579544252-intron-Distal3.131566.44040K562CSTF2T
chr177960377679603868-intron-Distal5.738119.35430HepG2EFTUD2
chr177959346979593569-intron-Distal4.597805.04209K562MATR3
chr177954380579543970-intron-Distal3.325298.06229HepG2HNRNPM
chr177953456779534611-intron-Distal,intron-Proximal4.937684.40745K562SF3B4
chr177959270579592761-intron-Distal3.249703.35050HepG2SUGP2
chr177953875479538809-intron-Distal3.518454.06013K562PRPF8
chr177954418779544235-intron-Distal4.120265.28523K562DDX51
chr177957367379573704-intron-Distal,intron-Proximal4.566315.97994K562AQR
chr177959204579592100-intron-Distal4.178853.47525K562MATR3
chr177958810579588129-intron-Distal4.2898612.81271K562PTBP1
chr177954430279544355-intron-Distal3.422158.13965K562RBFOX2
chr177954427879544362-intron-Distal3.503917.25352K562HNRNPU
chr177952644279526459-intron-Distal3.114798.15947K562U2AF2
chr177958841479588489-intron-Distal4.198208.81047K562HNRNPM
chr177954182879541911-intron-Distal3.403973.61371K562SND1
chr177954715879547229-intron-Distal3.419643.90822HepG2HNRNPM
chr177959223979592287-intron-Distal4.669354.90095K562PTBP1
chr177955839379558476-intron-Distal3.926624.15538K562HNRNPC
chr177959192879592003-intron-Distal4.352934.18579K562MATR3
chr177959222279592293-intron-Distal5.060807.82233K562MATR3
chr177954389879543980-intron-Distal3.098816.35280K562RBFOX2
chr177953619479536210-intron-Distal,intron-Proximal7.1928423.40171K562SF3B4
chr177953899679539035-intron-Distal,intron-Proximal4.353344.98250K562AQR
chr177958801779588199-intron-Distal3.547335.06208K562MATR3
chr177959204479592123-intron-Distal4.632425.14122HepG2PCBP2
chr177954858579548646-intron-Distal3.981883.53896K562NONO
chr177954183479541904-intron-Distal4.215654.13641K562TARDBP
chr177952866179528777-intron-Distal,intron-Proximal3.477147.01244HepG2ILF3
chr177958027579580337-intron-Distal,intron-Proximal6.7283518.62356K562AQR
chr177958879779588853-intron-Distal4.535514.66899HepG2HNRNPM
chr177958812979588157-intron-Distal4.563606.59655K562PTBP1
chr177954497079545018-intron-Distal3.529603.62708K562CSTF2T
chr177956723879567326-intron-Distal,intron-Proximal4.232097.95645K562EFTUD2
chr177954762079547690-intron-Distal3.215023.17504K562CSTF2T
chr177958842479588498-intron-Distal4.374559.41947HepG2HNRNPM
chr177954702779547129-intron-Distal3.321253.69530HepG2CSTF2T
chr177954418979544229-intron-Distal4.030193.82910K562NONO
chr177959241979592473-intron-Distal4.154033.90241K562MATR3
chr177958843179588503-intron-Distal4.494477.68118HepG2RBFOX2
chr177954429779544357-intron-Distal3.938396.67564K562CSTF2T
chr177954416679544255-intron-Distal3.327087.25779K562RBFOX2
chr177954398079544043-intron-Distal4.3198413.51913K562RBFOX2
chr177959212379592214-intron-Distal3.744328.93443K562MATR3
chr177958878979588853-intron-Distal4.562585.04680K562HNRNPM
chr177954418679544290-intron-Distal3.115005.65257HepG2RBFOX2
chr177958176879581884-intron-Distal4.712135.72853HepG2HNRNPM
chr177954419079544255-intron-Distal3.168473.39478K562TAF15
chr177958805779588105-intron-Distal3.559808.85069K562PTBP1
chr177959180479591928-intron-Distal5.086997.06647K562MATR3
chr177954387579543985-intron-Distal3.350368.12619K562NONO
chr177956936579569410-intron-Distal3.214894.03067HepG2HNRNPC
chr177954353779543596-intron-Distal3.820743.33944K562MATR3
chr177959659179596656-intron-Distal,intron-Proximal3.166143.94281K562PRPF8
chr177959346579593558-intron-Distal4.053456.02743K562HNRNPM
chr177958887179588942-intron-Distal3.097185.44397K562HNRNPM
chr177954430179544355-intron-Distal3.762133.13793K562SAFB
chr177954499479545076-intron-Distal3.626325.26318K562FUS
chr177957718679577215-intron-Distal,intron-Proximal5.8004511.56697K562AQR
chr177958800479588154-intron-Distal4.1772215.65214HepG2PTBP1
chr177954725979547358-intron-Distal3.199913.86744K562HNRNPM
chr177953614979536193-intron-Distal,intron-Proximal7.3030026.18192K562SF3B4
chr177955589479555938-intron-Distal,intron-Proximal3.267203.20886K562PRPF8
chr177959658179596686-intron-Distal,intron-Proximal4.499595.70968K562U2AF2
chr177954540179545480-intron-Distal4.187194.57394K562HNRNPM
chr177957141179571480-intron-Distal,intron-Proximal5.032056.45599K562PRPF8
chr177958801279588057-intron-Distal4.7660610.02898K562PTBP1
chr177954463679544701-intron-Distal4.022517.50970K562HNRNPU
chr177959239879592487-intron-Distal4.852007.14375HepG2SUGP2
chr177954252279542596-intron-Distal4.576835.40320K562NONO
chr177952646379526500-intron-Distal6.58378400.00000K562SF3B4
chr177956746079567524-intron-Distal,intron-Proximal4.781984.57682HepG2SF3B4
chr177957143579571550-intron-Distal,intron-Proximal3.754724.37625HepG2RBM22
chr177954713779547259-intron-Distal3.537204.32038K562HNRNPM
chr177954867479548729-intron-Distal3.265963.10641K562HNRNPM
chr177959342979593553-intron-Distal4.311783.27946HepG2HNRNPM
chr177959356579593636-intron-Distal4.315234.51309K562HNRNPM
chr177957748679577607-intron-Distal3.589155.50447HepG2ILF3
chr177952646679526500-intron-Distal6.4408124.76452HepG2SF3B4
chr177957126879571349-intron-Distal3.950793.25538K562KHSRP
chr177955840179558468-intron-Distal4.144464.04710HepG2HNRNPC
chr177954381679543865-intron-Distal4.926935.04868K562HNRNPM
chr177959658679596671-intron-Distal,intron-Proximal3.330624.81700HepG2U2AF2
chr177954471679544867-intron-Distal3.895736.80844K562FUS
chr177953616879536213-intron-Distal,intron-Proximal5.7267914.08765HepG2SF3B4
chr177952655979526605-intron-Distal5.0658519.10916K562SF3B4
chr177960389679603925-intron-Distal3.780037.56654HepG2PRPF8
chr177953894679539020-intron-Distal,intron-Proximal3.761544.79829K562EFTUD2
chr177957147679571542-intron-Distal,intron-Proximal4.698303.21006K562RBM22
chr177954418179544231-intron-Distal5.161244.26692K562DHX30
chr177952644879526498-intron-Distal4.9931915.23512HepG2SF3A3
chr177954264079542711-intron-Distal4.105003.04182K562HNRNPM
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NPLOC4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NPLOC4 is not available on ENCORE database.

  • 80 RBPs can affect the levels of NPLOC4.  








The Knockdown/knockout RNA-Seq assay for NPLOC4 is not available on ENCORE database.





80 RBPs can affect the gene expression of NPLOC4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NPLOC4ENSG00000182446.93431.201702562.856700.4209010.193109.17880HepG2ACO1
NPLOC4ENSG00000182446.94278.974302878.881200.571705.506104.78610HepG2AKAP1
NPLOC4ENSG00000182446.93108.241202574.884000.271503.948003.04360HepG2AKAP8L
NPLOC4ENSG00000182446.93612.954602692.684900.424004.774204.01510HepG2BOP1
NPLOC4ENSG00000182446.93477.755502263.019200.619807.820706.57140HepG2CIRBP
NPLOC4ENSG00000182446.91792.392502373.40250-0.405101.985601.34240HepG2CNOT7
NPLOC4ENSG00000182446.93649.913702771.292900.397207.422506.46440HepG2CELF1
NPLOC4ENSG00000182446.92251.961201889.954500.252701.911301.33550HepG2DDX21
NPLOC4ENSG00000182446.93948.636902757.491400.517905.334604.49120HepG2DDX3X
NPLOC4ENSG00000182446.93425.379702369.352200.531703.747303.03770HepG2DDX6
NPLOC4ENSG00000182446.92944.310102277.110300.370602.940902.32990HepG2EIF2S1
NPLOC4ENSG00000182446.92058.982901554.958200.405003.186402.22270HepG2EIF3D
NPLOC4ENSG00000182446.94132.382602516.181600.715608.263007.16370HepG2EIF4A3
NPLOC4ENSG00000182446.93727.004102450.415000.604904.902904.00450HepG2EIF4B
NPLOC4ENSG00000182446.93052.099502504.354200.285302.720001.89240HepG2EWSR1
NPLOC4ENSG00000182446.93987.573003197.459100.318502.202601.51210HepG2FIP1L1
NPLOC4ENSG00000182446.93338.556602539.608100.394503.368002.60860HepG2FXR1
NPLOC4ENSG00000182446.93228.384502355.392700.454703.921203.13620HepG2G3BP1
NPLOC4ENSG00000182446.91745.102901384.453100.333902.470501.62930HepG2GEMIN5
NPLOC4ENSG00000182446.93302.754702386.136900.468905.232404.29440HepG2HNRNPK
NPLOC4ENSG00000182446.91486.780802084.88510-0.487809.978108.88460HepG2HNRNPU
NPLOC4ENSG00000182446.93442.631102394.039300.524005.677204.74330HepG2IGF2BP2
NPLOC4ENSG00000182446.93431.376802247.370600.610402.449301.53060HepG2IGF2BP3
NPLOC4ENSG00000182446.92477.027302129.641500.217903.370202.56760HepG2ILF2
NPLOC4ENSG00000182446.95243.331403516.903700.576105.128103.98380HepG2LARP4
NPLOC4ENSG00000182446.92380.556801849.276300.364203.181801.96490HepG2LARP7
NPLOC4ENSG00000182446.93940.687602540.498700.633207.667906.59190HepG2MAGOH
NPLOC4ENSG00000182446.93804.488202554.573400.574505.740604.85820HepG2MATR3
NPLOC4ENSG00000182446.92424.286601627.317300.575003.512102.33090HepG2METAP2
NPLOC4ENSG00000182446.93125.678602587.670100.272402.477201.70990HepG2MSI2
NPLOC4ENSG00000182446.93523.761602614.630700.430403.641302.91820HepG2NCBP2
NPLOC4ENSG00000182446.91768.616602371.18190-0.423004.269303.34540HepG2NSUN2
NPLOC4ENSG00000182446.93195.193302169.567800.558403.117502.17210HepG2PABPC1
NPLOC4ENSG00000182446.93551.703902327.960700.609306.952205.81440HepG2PABPC4
NPLOC4ENSG00000182446.93324.812902330.586300.5125012.7115011.56130HepG2PCBP1
NPLOC4ENSG00000182446.92179.806902604.57820-0.256803.363702.51790HepG2PRPF4
NPLOC4ENSG00000182446.93488.764902371.473800.5568014.5746013.51070HepG2PTBP1
NPLOC4ENSG00000182446.93435.856702820.545300.284602.695102.10590HepG2PUF60
NPLOC4ENSG00000182446.93734.553602994.161700.318707.888806.99360HepG2PUM1
NPLOC4ENSG00000182446.93950.145802991.957000.400705.974405.00180HepG2PUM2
NPLOC4ENSG00000182446.93023.575502610.433400.211902.953502.32210HepG2PUS1
NPLOC4ENSG00000182446.93198.283102568.332600.316403.997303.26580HepG2QKI
NPLOC4ENSG00000182446.94416.211903742.796700.238603.109902.56910HepG2RBM22
NPLOC4ENSG00000182446.93007.778302330.939000.367704.195903.38080HepG2RBM25
NPLOC4ENSG00000182446.93582.945702639.210100.440909.531608.63640HepG2NELFE
NPLOC4ENSG00000182446.92544.672201513.168400.7498013.9174012.67690HepG2RPS19
NPLOC4ENSG00000182446.92695.638702056.549900.390303.293102.41960HepG2RPS2
NPLOC4ENSG00000182446.92417.212601518.501500.670608.717807.07470HepG2SERBP1
NPLOC4ENSG00000182446.94763.245003254.978700.549204.176703.33890HepG2SF3A3
NPLOC4ENSG00000182446.93503.349202646.800000.404404.327603.46270HepG2SF3B1
NPLOC4ENSG00000182446.93615.081302468.983300.5500014.7821013.58010HepG2SF3B4
NPLOC4ENSG00000182446.92806.974702165.208800.374409.213708.14960HepG2SMN1
NPLOC4ENSG00000182446.93741.310702113.365300.823908.680706.93630HepG2SMNDC1
NPLOC4ENSG00000182446.95704.969304227.319500.4324012.3867011.52850HepG2SRFBP1
NPLOC4ENSG00000182446.93895.076502577.095100.5958019.1314018.12310HepG2SRSF1
NPLOC4ENSG00000182446.93336.995902784.911600.260803.956603.23140HepG2SRSF5
NPLOC4ENSG00000182446.92890.547702096.613600.4632010.902709.93440HepG2SRSF9
NPLOC4ENSG00000182446.92838.875502074.202300.452703.150101.97170HepG2STIP1
NPLOC4ENSG00000182446.94053.310803167.182600.355807.380806.44520HepG2SUCLG1
NPLOC4ENSG00000182446.92841.477102158.953900.396204.759203.54210HepG2SUPT6H
NPLOC4ENSG00000182446.91861.570802316.42410-0.315403.849503.20700HepG2TAF15
NPLOC4ENSG00000182446.93241.177702025.863000.6779014.7660013.77230HepG2TIAL1
NPLOC4ENSG00000182446.93419.108902755.599500.311203.362602.39120HepG2TUFM
NPLOC4ENSG00000182446.93661.489602735.136300.420704.344003.56590HepG2U2AF1
NPLOC4ENSG00000182446.94395.580002001.861101.134604.071802.86220HepG2U2AF2
NPLOC4ENSG00000182446.93491.985102886.668400.274504.755503.88210HepG2UPF1
NPLOC4ENSG00000182446.93562.680902786.965000.354207.280106.38490HepG2UTP3
NPLOC4ENSG00000182446.91866.238902247.60820-0.268301.994101.37080HepG2XRN2
NPLOC4ENSG00000182446.92262.515902570.38020-0.184102.339301.71480HepG2ZC3H8
NPLOC4ENSG00000182446.98238.379503174.782801.37560149.89030147.62840HepG2ZNF622
NPLOC4ENSG00000182446.94914.821804011.888900.292802.774802.12010K562AKAP8L
NPLOC4ENSG00000182446.93036.887702449.563100.310002.623701.38050K562CIRBP
NPLOC4ENSG00000182446.92219.288401741.285200.349804.330603.34610K562EIF3G
NPLOC4ENSG00000182446.93342.320702581.200100.372703.899802.93000K562EIF4A3
NPLOC4ENSG00000182446.92803.736202324.503100.270303.023801.80030K562EIF4B
NPLOC4ENSG00000182446.93547.211402684.338100.402007.311206.39130K562FXR1
NPLOC4ENSG00000182446.91165.165901689.31270-0.535903.936503.05680K562G3BP2
NPLOC4ENSG00000182446.92922.174902423.370300.269902.249701.53300K562GPKOW
NPLOC4ENSG00000182446.92947.770003597.24430-0.287302.865301.77250K562HNRNPA1
NPLOC4ENSG00000182446.92200.363002735.55870-0.314103.101102.47370K562HNRNPC
NPLOC4ENSG00000182446.92688.869603983.86270-0.5672010.751309.01650K562HNRNPU
NPLOC4ENSG00000182446.93624.341704389.38910-0.276302.202501.49060K562HSPD1
NPLOC4ENSG00000182446.93021.534502286.586100.402002.905901.84740K562IGF2BP2
NPLOC4ENSG00000182446.93050.762402402.050800.344803.615502.64690K562MAGOH
NPLOC4ENSG00000182446.94032.503304769.60950-0.242202.355301.52630K562MBNL1
NPLOC4ENSG00000182446.92858.560002348.498500.283402.810701.45110K562PCBP1
NPLOC4ENSG00000182446.93686.363702333.822100.6594012.8328011.45820K562PTBP1
NPLOC4ENSG00000182446.94586.067503876.637900.242402.651602.06970K562RBM15
NPLOC4ENSG00000182446.92916.391502237.277000.382303.809302.81110K562RBM22
NPLOC4ENSG00000182446.95076.287804297.277500.240303.107602.24350K562SF3A3
NPLOC4ENSG00000182446.92470.109701755.509000.492607.387305.94480K562SF3B4
NPLOC4ENSG00000182446.94025.471502288.042900.8149019.1704017.32720K562SRSF1
NPLOC4ENSG00000182446.93560.255002315.392000.620608.397007.07880K562TARDBP
NPLOC4ENSG00000182446.92839.829302233.524500.346403.908802.91310K562TIA1
NPLOC4ENSG00000182446.92365.819301690.317600.484906.351205.14190K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NPLOC4 is not available on ENCORE database.





14 RBPs can affect the splicing of NPLOC4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENPLOC4ENSG00000182446.9chr17-795360417953613779531934795326337953904279539114-0.154000.000000.00004excludedHepG2U2AF1
SENPLOC4ENSG00000182446.9chr17-7953043879530594795263417952644279532530795326330.086000.000010.00072includedK562AKAP8L
SENPLOC4ENSG00000182446.9chr17-795559947955613079539042795391147956314179563268-0.079000.002830.06902excludedK562AKAP8L
SENPLOC4ENSG00000182446.9chr17-7953094679531005795261167952644279532530795326330.141000.002140.04962includedHepG2HNRNPK
SENPLOC4ENSG00000182446.9chr17-795559697955613079539042795391147956314179563348-0.057000.000260.00390excludedK562AQR
SENPLOC4ENSG00000182446.9chr17-7953043879530594795263417952644279532530795326330.079000.000040.00112includedK562PUS1
SENPLOC4ENSG00000182446.9chr17-795559697955613079539042795391147956314179563268-0.064000.000060.00151excludedK562PUS1
SENPLOC4ENSG00000182446.9chr17-795559697955613079539042795391147956314179563268-0.083000.005970.09254excludedK562U2AF1
SENPLOC4ENSG00000182446.9chr17-7953043879530594795263417952644279532530795326330.088000.000060.00376includedK562UTP18
SENPLOC4ENSG00000182446.9chr17-795559697955613079539042795391147956314179563268-0.053000.000580.02252excludedK562UTP18
SENPLOC4ENSG00000182446.9chr17-795772357957728479575753795758487958034379580542-0.059000.001120.04108excludedK562HNRNPU
SENPLOC4ENSG00000182446.9chr17-7953043879530594795263417952644279532530795326330.059000.001080.02890includedK562RBM15
SENPLOC4ENSG00000182446.9chr17-795772357957728479575753795758487958034379580520-0.065000.000110.00488excludedK562RBM15
SENPLOC4ENSG00000182446.9chr17-7953043879530594795263417952644279532530795326330.121000.000000.00014includedK562AGGF1
SENPLOC4ENSG00000182446.9chr17-7953497979535101795344427953455979536041795361090.199000.000000.00000includedK562HNRNPC
SENPLOC4ENSG00000182446.9chr17-7953043879530594795263417952644279532530795326650.077000.000310.00708includedK562HNRNPC
A3SSNPLOC4ENSG00000182446.9chr17-7955599479556145795559947955613079563141795632680.078000.000050.00734longerK562AGGF1
A3SSNPLOC4ENSG00000182446.9chr17-7955596979556158795559697955613079563141795633480.216000.000000.00000longerK562AQR
A3SSNPLOC4ENSG00000182446.9chr17-7957575379575986795757537957584879577235795773830.076000.000000.00000longerK562AQR
A3SSNPLOC4ENSG00000182446.9chr17-7953253079532731795325307953263379534442795345590.158000.000000.00000longerK562AQR
A3SSNPLOC4ENSG00000182446.9chr17-7956314179563287795631417956326879564270795643420.067000.000000.00000longerK562AQR
A3SSNPLOC4ENSG00000182446.9chr17-7959675079596926795967507959683179603941796040860.239000.000000.00000longerK562AQR
MXENPLOC4ENSG00000182446.9chr17-7953904279539114795559697955613079534442795345597956314179563268-0.155000.000070.002442includedK562U2AF1
MXENPLOC4ENSG00000182446.9chr17-7953904279539114795559697955613079534442795345597956314179563268-0.077000.000020.000342includedK562AQR
MXENPLOC4ENSG00000182446.9chr17-7958919179589304795967507959683179580343795805207960394179604086-0.106000.010890.067782includedK562AQR
MXENPLOC4ENSG00000182446.9chr17-7957371679573840795772357957728479571689795717537958034379580520-0.150000.000170.013102includedHepG2BCCIP
MXENPLOC4ENSG00000182446.9chr17-7953904279539114795559697955613079532530795326337956314179563268-0.113000.000000.000002includedHepG2U2AF2
MXENPLOC4ENSG00000182446.9chr17-79567366795674537957157379571753795642707956434279573716795738400.117000.000550.030321includedK562SAFB
MXENPLOC4ENSG00000182446.9chr17-7957371679573840795772357957728479571689795717537958034379580520-0.122000.001230.038792includedK562DHX30

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NPLOC4 is not avaliable on ENCORE database.