ZFYVE19

General Information

Gene Name       : ZFYVE19
Gene ID             : ENSG00000166140.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZFYVE19)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZFYVE19ENSG00000166140.1717.2315.1116.17ENCSR000AEF
HepG2ZFYVE19ENSG00000166140.1727.1421.6224.38ENCSR985KAT
K562ZFYVE19ENSG00000166140.1721.6524.7823.21ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZFYVE19 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZFYVE19 RNA is bound by 11 proteins.  







eCLIP assay for ZFYVE19 is not avaliable on ENCORE database.





11 proteins are bound to ZFYVE19 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr154110133741101436+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.206113.55800HepG2BCLAF1
chr154110633441106434+3'-UTR,CDS,intron-Proximal3.101373.88746HepG2U2AF1
chr154110614041106192+3'-UTR,CDS,intron-Proximal3.884414.41267HepG2PPIG
chr154110561241105681+3'-UTR,CDS,intron-Proximal5.416118.83608K562AQR
chr154110621441106318+3'-UTR,CDS,intron-Proximal4.8828019.01042HepG2PRPF8
chr154110594941106009+3'-UTR,CDS5.227946.16445HepG2PPIG
chr154110633441106390+3'-UTR,CDS,intron-Proximal3.747893.91876HepG2U2AF2
chr154110288541102967+5'-UTR,CDS,intron-Proximal3.652443.05161HepG2PPIG
chr154109990041100022+CDS,intron-Distal,intron-Proximal3.688185.11124K562DDX6
chr154109990741100001+CDS,intron-Distal,intron-Proximal4.020663.03048HepG2GTF2F1
chr154109990441100009+CDS,intron-Distal,intron-Proximal3.391886.98489K562GTF2F1
chr154109993241100023+CDS,intron-Distal,intron-Proximal3.111103.52645HepG2NCBP2
chr154109988941100015+CDS,intron-Distal,intron-Proximal3.649419.54003HepG2PRPF4
chr154109992541100039+CDS,intron-Distal,intron-Proximal3.287995.62662K562BUD13
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZFYVE19 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZFYVE19 is not available on ENCORE database.

  • 46 RBPs can affect the levels of ZFYVE19.  








The Knockdown/knockout RNA-Seq assay for ZFYVE19 is not available on ENCORE database.





46 RBPs can affect the gene expression of ZFYVE19 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZFYVE19ENSG00000166140.13198.89650329.30080-0.727404.593903.24380HepG2AATF
ZFYVE19ENSG00000166140.13881.99370619.379500.509803.776102.86310HepG2ASCC1
ZFYVE19ENSG00000166140.13759.69410588.461100.368402.136501.45140HepG2CIRBP
ZFYVE19ENSG00000166140.13384.58190284.850200.433002.349801.44770HepG2DHX30
ZFYVE19ENSG00000166140.13415.73490295.337600.493203.522102.73520HepG2DNAJC21
ZFYVE19ENSG00000166140.13846.68940654.318500.371702.019801.47120HepG2EIF4A3
ZFYVE19ENSG00000166140.13312.34030637.18420-1.028608.122706.97470HepG2EIF4B
ZFYVE19ENSG00000166140.13589.06970387.747600.603203.916603.16610HepG2GPKOW
ZFYVE19ENSG00000166140.13549.69300406.377200.435703.077202.31600HepG2IGF2BP1
ZFYVE19ENSG00000166140.13496.30280664.25900-0.420502.239801.66840HepG2MATR3
ZFYVE19ENSG00000166140.13699.45990450.712300.633903.070002.13300HepG2PABPC1
ZFYVE19ENSG00000166140.13430.81230660.37080-0.616207.249106.34260HepG2PCBP1
ZFYVE19ENSG00000166140.13473.77430671.98510-0.504204.531103.86850HepG2PTBP1
ZFYVE19ENSG00000166140.13808.48710554.168300.544805.551604.74610HepG2PUF60
ZFYVE19ENSG00000166140.13618.16220475.716800.377803.344102.68210HepG2PUS1
ZFYVE19ENSG00000166140.13562.68550727.70580-0.371002.723602.10360HepG2QKI
ZFYVE19ENSG00000166140.13492.31330599.14960-0.283301.751501.31500HepG2RBM22
ZFYVE19ENSG00000166140.13542.81990747.82730-0.462204.430203.77450HepG2NELFE
ZFYVE19ENSG00000166140.13510.96760696.54950-0.447004.090503.35940HepG2RECQL
ZFYVE19ENSG00000166140.13429.69470293.400300.550304.727103.92340HepG2SAFB2
ZFYVE19ENSG00000166140.13534.16840699.56380-0.389203.167502.53970HepG2SF3B4
ZFYVE19ENSG00000166140.13480.66310730.21740-0.603307.080806.40740HepG2SRSF1
ZFYVE19ENSG00000166140.13420.04890547.22500-0.381601.969801.42990HepG2SRSF5
ZFYVE19ENSG00000166140.13881.00470587.572000.584308.600907.79540HepG2SSB
ZFYVE19ENSG00000166140.13722.31930353.570701.030508.918407.81590HepG2SUPV3L1
ZFYVE19ENSG00000166140.13489.88350656.41520-0.422203.323302.71750HepG2TAF15
ZFYVE19ENSG00000166140.13473.46930603.08470-0.349102.228801.47650HepG2TIA1
ZFYVE19ENSG00000166140.13518.59840320.145400.695806.635505.92180HepG2TIAL1
ZFYVE19ENSG00000166140.13630.55180471.533700.419203.960403.14820HepG2UPF1
ZFYVE19ENSG00000166140.13527.94750323.647500.705903.341702.23290HepG2UPF2
ZFYVE19ENSG00000166140.13600.81440348.052900.787505.412304.40900HepG2XRN2
ZFYVE19ENSG00000166140.13648.14200518.599800.321602.813902.26390HepG2ZNF622
ZFYVE19ENSG00000166140.13488.99470321.329800.605704.641003.62720K562CPSF6
ZFYVE19ENSG00000166140.13548.67710419.309300.387802.396401.63040K562EIF4A3
ZFYVE19ENSG00000166140.131010.85480816.173900.308502.343601.47450K562EIF4G2
ZFYVE19ENSG00000166140.13536.87340373.564700.523103.653602.66910K562FIP1L1
ZFYVE19ENSG00000166140.13508.41410326.976500.636704.610503.50350K562FMR1
ZFYVE19ENSG00000166140.13419.34970277.155500.597403.603302.54770K562FTO
ZFYVE19ENSG00000166140.1384.56490252.84060-1.580107.444506.16910K562G3BP2
ZFYVE19ENSG00000166140.13450.74560306.778100.555003.655302.74750K562GPKOW
ZFYVE19ENSG00000166140.13943.06420727.471000.374402.696601.94850K562GRSF1
ZFYVE19ENSG00000166140.13574.35970384.678900.578204.550103.80340K562HNRNPC
ZFYVE19ENSG00000166140.13903.65350725.291500.317102.179801.38900K562MBNL1
ZFYVE19ENSG00000166140.13456.45400299.455000.608004.370303.25200K562METAP2
ZFYVE19ENSG00000166140.13669.35780550.519100.281902.311901.62360K562NSUN2
ZFYVE19ENSG00000166140.13501.92500394.591900.347002.108501.40970K562POLR2G
ZFYVE19ENSG00000166140.13476.48370344.913400.466102.804501.89320K562PSIP1
ZFYVE19ENSG00000166140.13165.15480252.88930-0.614702.295801.56550K562U2AF2
ZFYVE19ENSG00000166140.13703.91430583.729900.270001.991601.37540K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZFYVE19 is not available on ENCORE database.





34 RBPs can affect the splicing of ZFYVE19 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZFYVE19ENSG00000166140.13chr15+4110491041105100411028464110295541105535411056150.252000.000950.07378includedHepG2G3BP1
SEZFYVE19ENSG00000166140.13chr15+411048964110510041102846411029554110553541105615-0.312000.000380.00956excludedK562SRSF1
SEZFYVE19ENSG00000166140.13chr15+411048964110510041102846411029554110553541105615-0.410000.000280.00736excludedK562SF3B4
SEZFYVE19ENSG00000166140.13chr15+411048964110510041102846411029554110553541105615-0.267000.001460.04952excludedK562PRPF8
SEZFYVE19ENSG00000166140.13chr15+4110489641105100411028464110295541105535411056150.200000.000020.00314includedHepG2AKAP1
SEZFYVE19ENSG00000166140.13chr15+4110258541102669411022684110241441102846411029550.056000.000050.00094includedK562AQR
SEZFYVE19ENSG00000166140.13chr15+4110258541102669411022684110241441102846411029550.065000.000140.01052includedHepG2PTBP1
SEZFYVE19ENSG00000166140.13chr15+411025854110266941102268411024144110284641102955-0.054000.000020.01855excludedHepG2UPF1
SEZFYVE19ENSG00000166140.13chr15+411048964110510041102846411029554110553541105615-0.338000.000000.00000excludedHepG2SRSF1
SEZFYVE19ENSG00000166140.13chr15+411048964110510041102846411029554110553541105615-0.172000.004250.09314excludedHepG2SF3A3
SEZFYVE19ENSG00000166140.13chr15+411048964110510041102846411029554110553541105615-0.268000.002150.07015excludedHepG2HNRNPC
SEZFYVE19ENSG00000166140.13chr15+411048964110510041102846411029554110553541105615-0.207000.000380.02937excludedHepG2SRSF9
SEZFYVE19ENSG00000166140.13chr15+411048964110510041102846411029554110553541105615-0.306000.000040.00115excludedK562HNRNPC
A3SSZFYVE19ENSG00000166140.13chr15+4110282841102955411028464110295541102268411024140.053000.003660.02197longerK562AQR
A3SSZFYVE19ENSG00000166140.13chr15+4110202541102168411020494110216841101605411016560.150000.000000.00000longerK562AQR
A3SSZFYVE19ENSG00000166140.13chr15+411022684110239341102351411023934110202541102168-0.231000.000090.09590shorterK562PHF6
RIZFYVE19ENSG00000166140.13chr15+411020494110241441102049411021684110226841102414-0.194000.000000.00091excludedHepG2SFPQ
RIZFYVE19ENSG00000166140.13chr15+411061404110676741106140411062684110634541106767-0.379000.000000.00026excludedHepG2UPF1
RIZFYVE19ENSG00000166140.13chr15+4110553541106009411055354110561541105910411060090.260000.000090.00242includedK562SF3B4
RIZFYVE19ENSG00000166140.13chr15+411020494110241441102049411021684110226841102414-0.113000.001440.07116excludedK562DROSHA
RIZFYVE19ENSG00000166140.13chr15+4110614041106767411061404110626841106345411067670.394000.000230.00687includedHepG2PCBP2
RIZFYVE19ENSG00000166140.13chr15+411061404110676741106140411062684110634541106767-0.270000.001430.01789excludedHepG2SF3A3
RIZFYVE19ENSG00000166140.13chr15+411020494110241441102049411021684110226841102414-0.071000.000650.05973excludedK562NSUN2
RIZFYVE19ENSG00000166140.13chr15+4110553541106009411055354110561541105910411060090.337000.004220.02980includedHepG2U2AF2
RIZFYVE19ENSG00000166140.13chr15+411020494110241441102049411021684110226841102414-0.111000.010650.06358excludedHepG2U2AF2
RIZFYVE19ENSG00000166140.13chr15+411020494110241441102049411021684110226841102414-0.171000.000020.00357excludedHepG2HNRNPUL1
RIZFYVE19ENSG00000166140.13chr15+411020494110241441102049411021684110226841102414-0.104000.003750.09294excludedK562HNRNPUL1
RIZFYVE19ENSG00000166140.13chr15+411020494110241441102049411021684110226841102414-0.076000.000240.03604excludedK562UPF1
RIZFYVE19ENSG00000166140.13chr15+4110204941102414411020494110216841102268411024140.065000.004700.07366includedHepG2IGF2BP3
RIZFYVE19ENSG00000166140.13chr15+411061404110676741106140411062684110634541106767-0.371000.000180.02272excludedK562AARS
RIZFYVE19ENSG00000166140.13chr15+4110204941102414411020494110216841102268411024140.162000.000110.00432includedK562RBM22
RIZFYVE19ENSG00000166140.13chr15+411061404110676741106140411062684110634541106767-0.383000.000450.01359excludedK562RBM22
RIZFYVE19ENSG00000166140.13chr15+4110614041106767411061404110626841106345411067670.460000.000040.00064includedHepG2U2AF1
RIZFYVE19ENSG00000166140.13chr15+4110204941102414411020494110216841102268411024140.078000.005430.04927includedHepG2U2AF1
RIZFYVE19ENSG00000166140.13chr15+4110553541106009411055354110561541105910411060090.210000.000320.00451includedHepG2U2AF1
RIZFYVE19ENSG00000166140.13chr15+4110614041106767411061404110626841106345411067670.208000.008530.07451includedK562RBM15
RIZFYVE19ENSG00000166140.13chr15+4110204941102414411020494110216841102268411024140.061000.006580.08005includedHepG2G3BP1
RIZFYVE19ENSG00000166140.13chr15+4110553541106009411055354110561541105910411060090.178000.007250.09501includedK562U2AF1
RIZFYVE19ENSG00000166140.13chr15+4110204941102414411020494110216841102268411024140.073000.005200.08249includedHepG2KHSRP
RIZFYVE19ENSG00000166140.13chr15+4110204941102414411020494110216841102268411024140.095000.006750.08804includedHepG2TIAL1
RIZFYVE19ENSG00000166140.13chr15+4110204941102414411020494110216841102268411024140.060000.006660.06260includedHepG2NCBP2
RIZFYVE19ENSG00000166140.13chr15+411061404110676741106140411062684110634541106767-0.352000.000130.03944excludedHepG2FUS
RIZFYVE19ENSG00000166140.13chr15+411055354110600941105535411056154110591041106009-0.161000.000220.04770excludedK562WDR43
RIZFYVE19ENSG00000166140.13chr15+4110553541106009411055354110561541105910411060090.089000.003290.02487includedHepG2SF3B4
RIZFYVE19ENSG00000166140.13chr15+4110204941102414411020494110216841102268411024140.083000.007650.09423includedHepG2FUBP3
RIZFYVE19ENSG00000166140.13chr15+4110204941102414411020494110216841102268411024140.199000.000000.00000includedHepG2RBM22
RIZFYVE19ENSG00000166140.13chr15+4110553541106009411055354110561541105910411060090.086000.005990.05185includedHepG2RBM22
RIZFYVE19ENSG00000166140.13chr15+411061404110676741106140411062684110634541106767-0.236000.000340.00517excludedHepG2RBM22
RIZFYVE19ENSG00000166140.13chr15+4110204941102414411020494110216841102268411024140.065000.008030.07180includedHepG2HNRNPK
RIZFYVE19ENSG00000166140.13chr15+4110553541106009411055354110561541105910411060090.239000.000000.00003includedHepG2HNRNPK
RIZFYVE19ENSG00000166140.13chr15+4110614041106767411061404110626841106345411067670.270000.006570.06421includedK562UTP18
RIZFYVE19ENSG00000166140.13chr15+4110204941102414411020494110216841102268411024140.087000.001520.01725includedK562EFTUD2
RIZFYVE19ENSG00000166140.13chr15+4110553541106009411055354110561541105910411060090.199000.000030.00063includedK562EFTUD2
RIZFYVE19ENSG00000166140.13chr15+4110204941102414411020494110216841102268411024140.190000.000000.00000includedK562AQR
RIZFYVE19ENSG00000166140.13chr15+4110553541106009411055354110561541105910411060090.281000.000000.00001includedK562AQR
RIZFYVE19ENSG00000166140.13chr15+411020494110241441102049411021684110226841102414-0.127000.000150.02146excludedK562LARP4
RIZFYVE19ENSG00000166140.13chr15+4110204941102414411020494110216841102268411024140.092000.000760.06759includedHepG2CDC40

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZFYVE19 is not avaliable on ENCORE database.