TMEM129

General Information

Gene Name       : TMEM129
Gene ID             : ENSG00000168936.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TMEM129)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TMEM129ENSG00000168936.101.324.893.10ENCSR000AEF
HepG2TMEM129ENSG00000168936.1014.717.3511.03ENCSR985KAT
K562TMEM129ENSG00000168936.1017.5512.6215.09ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TMEM129 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TMEM129 RNA is bound by 13 proteins.  







eCLIP assay for TMEM129 is not avaliable on ENCORE database.





13 proteins are bound to TMEM129 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr417185841718683-3'-UTR,intron-Distal,intron-Proximal4.4456218.88773HepG2AKAP1
chr417179831718042-3'-UTR,intron-Distal3.415294.25667K562CSTF2T
chr417178921717963-3'-UTR,intron-Distal4.024727.71860K562UPF1
chr417179851718045-3'-UTR,intron-Distal3.417758.40080HepG2CSTF2T
chr417185901718661-3'-UTR,intron-Distal,intron-Proximal4.268386.12175K562AKAP1
chr417179731718053-3'-UTR,intron-Distal3.179595.57691HepG2LSM11
chr417186831718736-3'-UTR,intron-Distal4.7011612.95192HepG2AKAP1
chr417184181718550-3'-UTR,intron-Distal,intron-Proximal5.8943347.73397HepG2UPF1
chr417179631718054-3'-UTR,intron-Distal6.2504718.11656K562UPF1
chr417182941718334-3'-UTR,intron-Distal,intron-Proximal4.276093.81568K562FAM120A
chr417178341717926-3'-UTR,intron-Distal3.119554.14144HepG2LSM11
chr417185501718725-3'-UTR,intron-Distal,intron-Proximal5.5230136.65732HepG2UPF1
chr417182871718364-3'-UTR,intron-Distal,intron-Proximal3.542717.14301HepG2FAM120A
chr417181011718253-3'-UTR,intron-Distal,intron-Proximal3.210638.24916K562FAM120A
chr417178361717892-3'-UTR,intron-Distal3.507926.98582K562UPF1
chr417182961718364-3'-UTR,intron-Distal,intron-Proximal3.856933.39593HepG2PRPF4
chr417201771720219-3'-UTR,CDS,intron-Distal3.336326.88189HepG2DDX3X
chr417179811718065-3'-UTR,intron-Distal4.4780516.69193HepG2AKAP1
chr417188481718881-3'-UTR,intron-Distal4.688836.49490HepG2AKAP1
chr417183271718421-3'-UTR,intron-Distal,intron-Proximal6.3749723.74234HepG2AKAP1
chr417181031718201-3'-UTR,intron-Distal,intron-Proximal5.0486516.56087HepG2UPF1
chr417182531718304-3'-UTR,intron-Distal,intron-Proximal5.1504115.73546K562UPF1
chr417185101718558-3'-UTR,intron-Distal,intron-Proximal5.247508.40676K562UPF1
chr417183551718410-3'-UTR,intron-Distal3.375143.14078HepG2GRSF1
chr417182581718319-3'-UTR,intron-Distal,intron-Proximal5.8857716.32102HepG2UPF1
chr417183771718434-3'-UTR,intron-Distal3.462073.80864K562FAM120A
chr417179831718056-3'-UTR,intron-Distal3.276693.29499HepG2PRPF4
chr417178441717904-3'-UTR,intron-Distal3.8035712.06184HepG2AKAP1
chr417181061718204-3'-UTR,intron-Distal,intron-Proximal5.1009817.72609HepG2AKAP1
chr417184211718503-3'-UTR,intron-Distal,intron-Proximal6.7969127.36458HepG2AKAP1
chr417179831718058-3'-UTR,intron-Distal5.1365715.97458HepG2UPF1
chr417188311718887-3'-UTR,intron-Distal5.355829.46220HepG2UPF1
chr417183041718427-3'-UTR,intron-Distal,intron-Proximal6.0675729.02415K562UPF1
chr417181441718243-3'-UTR,intron-Distal,intron-Proximal4.475684.57620HepG2PRPF4
chr417183691718459-3'-UTR,intron-Distal3.598329.07580HepG2FAM120A
chr417179671718047-3'-UTR,intron-Distal3.720426.61024K562FAM120A
chr417185911718681-3'-UTR,intron-Distal,intron-Proximal3.606295.65050K562DDX55
chr417185031718584-3'-UTR,intron-Distal,intron-Proximal4.8927521.72191HepG2AKAP1
chr417183981718475-3'-UTR,intron-Distal3.326125.49438K562AKAP1
chr417182041718310-3'-UTR,intron-Distal,intron-Proximal6.6439327.08381HepG2AKAP1
chr417226361722692-5'-UTR,intron-Distal,intron-Proximal6.0587117.04678HepG2DDX3X
chr417225161722636-5'-UTR,CDS,intron-Distal,intron-Proximal4.0700732.63175HepG2DDX3X
chr417224321722516-CDS,intron-Distal,intron-Proximal4.9296017.39050HepG2DDX3X
chr417221351722187-intron-Distal3.068763.15535K562EWSR1
chr417216671721802-intron-Distal4.336997.20259K562GTF2F1
chr417217961721862-intron-Distal3.522935.18989HepG2PRPF4
chr417219051721974-intron-Distal4.047893.58513HepG2GTF2F1
chr417214171721497-intron-Distal3.669575.27813K562EWSR1
chr417216251721726-intron-Distal4.045856.92249K562EWSR1
chr417219441722000-intron-Distal4.137503.90256HepG2PRPF4
chr417221481722205-intron-Distal3.591063.58549K562NONO
chr417216671721771-intron-Distal5.3748911.34764HepG2PRPF4
chr417191701719216-intron-Distal,intron-Proximal4.217134.10339HepG2CSTF2T
chr417216521721753-intron-Distal5.7276912.01049HepG2FAM120A
chr417219021721992-intron-Distal4.810134.06667K562GTF2F1
chr417216591721755-intron-Distal3.872776.87384K562CSTF2T
chr417198121719879-intron-Distal,intron-Proximal3.009225.62171K562AQR
chr417218621721927-intron-Distal4.646026.75874HepG2PRPF4
chr417216331721734-intron-Distal3.212635.76705HepG2CSTF2T
chr417214211721516-intron-Distal4.237464.10323HepG2PRPF4
chr417219371722030-intron-Distal4.901807.75663K562CSTF2T
chr417213851721429-intron-Distal3.194373.69530HepG2CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TMEM129 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TMEM129 is not available on ENCORE database.

  • 85 RBPs can affect the levels of TMEM129.  








The Knockdown/knockout RNA-Seq assay for TMEM129 is not available on ENCORE database.





85 RBPs can affect the gene expression of TMEM129 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TMEM129ENSG00000168936.6261.19540362.04930-0.471102.359901.36640HepG2AATF
TMEM129ENSG00000168936.6511.80450755.56340-0.562007.535106.63190HepG2ACO1
TMEM129ENSG00000168936.6661.55670359.158400.881106.569005.24790HepG2BCLAF1
TMEM129ENSG00000168936.6654.26420268.571701.284505.789904.96320HepG2BOP1
TMEM129ENSG00000168936.6701.08160934.75470-0.415002.820202.03910HepG2CIRBP
TMEM129ENSG00000168936.6905.02180755.406900.260602.436301.80410HepG2CKAP4
TMEM129ENSG00000168936.6635.17480397.409800.676403.615102.73530HepG2CNOT7
TMEM129ENSG00000168936.6730.23220550.540000.407404.306103.41480HepG2DAZAP1
TMEM129ENSG00000168936.6405.47810304.633300.412502.646401.95490HepG2DNAJC21
TMEM129ENSG00000168936.6515.94940301.984900.7727010.466809.29710HepG2DNAJC2
TMEM129ENSG00000168936.6724.918301012.15120-0.481502.661601.98610HepG2EIF4B
TMEM129ENSG00000168936.6787.82250520.280900.598505.208304.10990HepG2EIF4G2
TMEM129ENSG00000168936.6389.54250709.56630-0.8652010.269508.80150HepG2FUBP3
TMEM129ENSG00000168936.6567.90420367.955300.626003.458602.21060HepG2GRSF1
TMEM129ENSG00000168936.6539.66390336.420500.681704.157602.45530HepG2HNRNPA0
TMEM129ENSG00000168936.6453.97270307.552200.561702.176501.59740HepG2HNRNPA1
TMEM129ENSG00000168936.6528.13390328.480600.685003.675602.05470HepG2HNRNPAB
TMEM129ENSG00000168936.6468.34230342.108800.453002.567001.89710HepG2HNRNPC
TMEM129ENSG00000168936.6516.72640344.260600.585803.287701.62110HepG2HNRNPD
TMEM129ENSG00000168936.6636.31980458.187100.473704.613903.71650HepG2HNRNPF
TMEM129ENSG00000168936.6644.51670339.846000.9232015.0270013.70530HepG2HNRNPU
TMEM129ENSG00000168936.6701.69420451.183200.637006.925205.82540HepG2IGF2BP1
TMEM129ENSG00000168936.6686.48570379.047800.856707.266205.24230HepG2KHDRBS1
TMEM129ENSG00000168936.6826.00460690.684500.258002.328201.39200HepG2KIF1C
TMEM129ENSG00000168936.6953.41410555.727700.778606.559805.26940HepG2LARP4
TMEM129ENSG00000168936.6729.143401079.97640-0.566704.553203.75100HepG2NCBP2
TMEM129ENSG00000168936.6926.29610545.913200.7627011.320209.81950HepG2NOL12
TMEM129ENSG00000168936.6432.97000336.372000.364102.337601.55220HepG2PARN
TMEM129ENSG00000168936.6500.11970303.113000.722307.692706.51240HepG2PPIL4
TMEM129ENSG00000168936.6875.54120521.116200.748508.900607.91370HepG2PUF60
TMEM129ENSG00000168936.6744.03310553.181100.427501.875501.36700HepG2PUM1
TMEM129ENSG00000168936.6706.38100552.781200.353602.478701.84390HepG2PUM2
TMEM129ENSG00000168936.6973.21650769.591400.338603.729803.03690HepG2PUS1
TMEM129ENSG00000168936.6434.471801080.73190-1.3147032.3499030.96330HepG2RBM22
TMEM129ENSG00000168936.6892.803301085.67620-0.282202.445601.93180HepG2NELFE
TMEM129ENSG00000168936.6669.04800399.417200.744105.209704.11040HepG2RPS3A
TMEM129ENSG00000168936.6511.67920302.639700.757509.243708.17520HepG2SAFB2
TMEM129ENSG00000168936.6579.60070376.110900.623803.926502.37560HepG2SART3
TMEM129ENSG00000168936.6478.99010682.01780-0.509802.565401.91580HepG2SF3A3
TMEM129ENSG00000168936.6741.30030499.655400.569007.536506.46580HepG2SLBP
TMEM129ENSG00000168936.6475.69390352.915300.430603.592702.87580HepG2SMN1
TMEM129ENSG00000168936.6567.89130364.748300.638602.152401.31840HepG2SMNDC1
TMEM129ENSG00000168936.6748.642401220.61240-0.7053012.0985011.24750HepG2SRFBP1
TMEM129ENSG00000168936.6675.668601060.11670-0.6498010.593609.80040HepG2SRSF1
TMEM129ENSG00000168936.6659.63600450.154700.551106.252805.27390HepG2SRSF7
TMEM129ENSG00000168936.6556.64280862.47990-0.631709.615408.69460HepG2SRSF9
TMEM129ENSG00000168936.6945.76040585.155900.6926012.0518010.90980HepG2SUCLG1
TMEM129ENSG00000168936.6504.26710952.93380-0.9182015.9734014.79040HepG2TAF15
TMEM129ENSG00000168936.6450.58510260.068500.792802.613901.90610HepG2TARDBP
TMEM129ENSG00000168936.6597.29430330.172000.8551010.215209.35940HepG2TIAL1
TMEM129ENSG00000168936.6529.85070333.179200.669207.575606.71970HepG2TRIM56
TMEM129ENSG00000168936.6818.42870509.097400.684807.638706.07840HepG2TUFM
TMEM129ENSG00000168936.6303.93810668.33100-1.136806.461305.51850HepG2U2AF1
TMEM129ENSG00000168936.6849.28740538.864400.656204.858203.73110HepG2UBE2L3
TMEM129ENSG00000168936.6393.02480604.84470-0.621907.396606.34640HepG2UPF1
TMEM129ENSG00000168936.6637.03550398.325400.677303.355502.56160HepG2XRN2
TMEM129ENSG00000168936.6366.57790508.02840-0.470804.134703.33840HepG2ZC3H8
TMEM129ENSG00000168936.6239.36820455.87390-0.929402.909101.69370K562AARS
TMEM129ENSG00000168936.6890.95510621.601500.519306.461704.97000K562BCLAF1
TMEM129ENSG00000168936.6650.36720494.806600.394302.438401.46090K562CCAR1
TMEM129ENSG00000168936.6556.68930441.206600.335302.045901.36280K562CPSF6
TMEM129ENSG00000168936.6618.51830471.577400.391202.870501.79510K562CSTF2
TMEM129ENSG00000168936.61583.195801187.487600.414805.024003.77640K562EIF4G2
TMEM129ENSG00000168936.6876.00740638.189200.456904.009902.44750K562EXOSC5
TMEM129ENSG00000168936.6829.52630475.013800.804209.476307.79860K562FIP1L1
TMEM129ENSG00000168936.6207.77180433.15050-1.059909.308507.05660K562FKBP4
TMEM129ENSG00000168936.6411.97230675.80960-0.714106.200205.34810K562FXR1
TMEM129ENSG00000168936.651.15700195.69040-1.9356010.558509.00280K562G3BP2
TMEM129ENSG00000168936.6673.90710446.973300.592303.040101.53970K562GEMIN5
TMEM129ENSG00000168936.61410.49930934.004700.594607.266506.02940K562GRSF1
TMEM129ENSG00000168936.6598.87980445.387300.427102.430501.37380K562HNRNPF
TMEM129ENSG00000168936.6469.27560671.44390-0.516804.497702.10720K562HNRNPH1
TMEM129ENSG00000168936.6599.60370759.08270-0.340202.362101.39400K562HNRNPL
TMEM129ENSG00000168936.61449.338901074.457400.431704.776703.59520K562HNRNPU
TMEM129ENSG00000168936.6657.76940418.164800.653404.606403.14510K562IGF2BP2
TMEM129ENSG00000168936.6708.10630505.904800.485003.113001.54770K562LIN28B
TMEM129ENSG00000168936.6711.45120439.840000.693703.666302.13460K562NONO
TMEM129ENSG00000168936.6902.31510539.256000.742608.371606.75690K562PPIG
TMEM129ENSG00000168936.6692.70410447.143900.631405.419504.09640K562PSIP1
TMEM129ENSG00000168936.6948.396701295.59150-0.450004.108003.12030K562PUF60
TMEM129ENSG00000168936.6697.38200998.65110-0.518004.415003.75210K562PUS1
TMEM129ENSG00000168936.6705.90450973.09010-0.463104.708503.95530K562RBM15
TMEM129ENSG00000168936.6535.23230408.035900.391402.578801.62510K562RCC2
TMEM129ENSG00000168936.6277.21020400.67490-0.531502.591501.65190K562SF3B1
TMEM129ENSG00000168936.6162.88340277.66510-0.769504.043702.02310K562SND1
TMEM129ENSG00000168936.6567.14590386.799400.552004.037102.72460K562SRFBP1
TMEM129ENSG00000168936.6688.56180433.430200.667703.878101.91120K562SRP68
TMEM129ENSG00000168936.6614.99320419.977600.550204.170002.83860K562SRSF4
TMEM129ENSG00000168936.6659.61180395.250700.738702.843301.77720K562SRSF5
TMEM129ENSG00000168936.6477.35870624.55060-0.387702.819801.99170K562SYNCRIP
TMEM129ENSG00000168936.6606.30610423.478400.517703.252502.48520K562TARDBP
TMEM129ENSG00000168936.6811.98030408.502200.9910015.0223012.99570K562TIA1
TMEM129ENSG00000168936.6671.91970430.068500.643605.047003.74890K562TIAL1
TMEM129ENSG00000168936.6633.36190400.947600.659505.965304.22030K562TRA2A
TMEM129ENSG00000168936.6695.23630456.976000.605305.348603.92940K562TRIM56
TMEM129ENSG00000168936.6118.81570196.00710-0.722203.635302.71240K562U2AF2
TMEM129ENSG00000168936.6731.03400452.751000.691103.476002.06530K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TMEM129 is not available on ENCORE database.





1 RBPs can affect the splicing of TMEM129 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSTMEM129ENSG00000168936.6chr4-1719242171946017192421719402171987817203530.157000.000620.05355longerHepG2HNRNPK

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TMEM129 is not avaliable on ENCORE database.