SDC3

General Information

Gene Name       : SDC3
Gene ID             : ENSG00000162512.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SDC3)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SDC3ENSG00000162512.150.000.030.01ENCSR000AEF
HepG2SDC3ENSG00000162512.153.291.922.60ENCSR985KAT
K562SDC3ENSG00000162512.1528.4020.4924.45ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SDC3 is not avaliable on ENCORE database.



Proteins bound to RNA

  • SDC3 RNA is bound by 27 proteins.  







eCLIP assay for SDC3 is not avaliable on ENCORE database.





27 proteins are bound to SDC3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr13134448431344579-3'-UTR,intron-Distal5.8533420.91202K562AKAP1
chr13134271531342755-3'-UTR,intron-Distal4.9478310.86839K562PUM2
chr13134256031342639-3'-UTR,intron-Distal3.703944.14151K562PCBP1
chr13134470031344743-3'-UTR,intron-Distal5.1714122.85387K562UPF1
chr13134402631344053-3'-UTR,intron-Distal6.4975344.24102K562UPF1
chr13134516031345211-3'-UTR,intron-Distal3.9064514.89062K562AGGF1
chr13134259131342646-3'-UTR,intron-Distal3.8501311.56027K562AKAP1
chr13134232931342369-3'-UTR,intron-Distal6.9763349.85364K562UPF1
chr13134495431345003-3'-UTR,intron-Distal3.041054.42116K562FAM120A
chr13134395531344006-3'-UTR,intron-Distal5.0572437.89449K562UPF1
chr13134376031343819-3'-UTR,intron-Distal6.2978315.11236K562AKAP1
chr13134252431342546-3'-UTR,intron-Distal4.7158610.86839K562PUM2
chr13134279531342842-3'-UTR,intron-Distal5.6781533.80563K562PUM2
chr13134257131342646-3'-UTR,intron-Distal5.110556.93499K562PUM1
chr13134269631342710-3'-UTR,intron-Distal4.1862023.29582K562UPF1
chr13134540631345422-3'-UTR,intron-Distal3.768385.33088K562AKAP1
chr13134394931343972-3'-UTR,intron-Distal5.464548.06559K562AKAP1
chr13134405331344125-3'-UTR,intron-Distal6.3318152.08629K562UPF1
chr13134539731345436-3'-UTR,intron-Distal3.047417.21775K562AGGF1
chr13134463031344674-3'-UTR,intron-Distal6.0628730.64888K562UPF1
chr13134528631345329-3'-UTR,intron-Distal3.220493.57974K562IGF2BP1
chr13134451731344590-3'-UTR,intron-Distal3.956768.35027K562FAM120A
chr13134259331342660-3'-UTR,intron-Distal5.0175042.78944K562UPF1
chr13134444031344527-3'-UTR,intron-Distal4.4311632.90798K562UPF1
chr13134393031343989-3'-UTR,intron-Distal3.462444.14411K562METAP2
chr13134453731344604-3'-UTR,intron-Distal5.8390234.63942K562UPF1
chr13134537331345475-3'-UTR,intron-Distal3.9021510.65059K562IGF2BP1
chr13134259931342666-3'-UTR,intron-Distal5.0834571.92830K562PUM2
chr13134251331342561-3'-UTR,intron-Distal6.8383353.13698K562UPF1
chr13134286331342899-3'-UTR,intron-Distal6.6331922.81166K562UPF1
chr13134437431344424-3'-UTR,intron-Distal7.0837832.06057K562UPF1
chr13134266631342715-3'-UTR,intron-Distal5.36629400.00000K562PUM2
chr13134546631345533-3'-UTR,intron-Distal4.4723142.09400K562UPF1
chr13134265631342714-3'-UTR,intron-Distal3.607426.16511K562AKAP1
chr13134539131345456-3'-UTR,intron-Distal3.732625.67528K562HNRNPL
chr13134233131342364-3'-UTR,intron-Distal3.406653.80983K562TIA1
chr13134471431344750-3'-UTR,intron-Distal3.396593.11711K562FAM120A
chr13134493031345012-3'-UTR,intron-Distal5.4499151.13218K562UPF1
chr13134463131344662-3'-UTR,intron-Distal5.337136.24531K562AKAP1
chr13134563631345692-3'-UTR,intron-Distal3.941833.15006K562RBM15
chr13134539931345451-3'-UTR,intron-Distal4.3199232.40014K562UPF1
chr13134266831342696-3'-UTR,intron-Distal4.6509627.42312K562UPF1
chr13134494831344993-3'-UTR,intron-Distal5.3149311.68253K562AKAP1
chr13134412531344278-3'-UTR,intron-Distal6.9788884.84807K562UPF1
chr13134513131345225-3'-UTR,intron-Distal3.9753313.64101K562HNRNPL
chr13134256131342593-3'-UTR,intron-Distal5.5191439.05965K562UPF1
chr13134284231342908-3'-UTR,intron-Distal5.6964685.11386K562PUM2
chr13134278831342839-3'-UTR,intron-Distal5.3162222.14930K562UPF1
chr13134382131343881-3'-UTR,intron-Distal5.7908737.87094K562UPF1
chr13134722031347270-CDS,intron-Distal3.664073.19539K562YBX3
chr13137567131375766-intron-Distal4.726675.12413K562GEMIN5
chr13138038431380458-intron-Distal4.3235012.15420K562EIF4G2
chr13137759831377656-intron-Distal4.661695.27179K562EWSR1
chr13137559731375658-intron-Distal4.553186.16396K562NONO
chr13137103531371075-intron-Distal4.152383.31153K562GTF2F1
chr13138049531380592-intron-Distal4.7634512.42402K562CSTF2T
chr13137502031375064-intron-Distal3.840933.30664K562NONO
chr13137808431378151-intron-Distal4.539843.48173K562GTF2F1
chr13138043131380461-intron-Distal4.342964.70168K562CSTF2T
chr13138037431380421-intron-Distal3.523983.92720K562TARDBP
chr13136033031360396-intron-Distal3.202773.41462K562EWSR1
chr13136626531366313-intron-Distal4.112493.87357K562EWSR1
chr13138026531380354-intron-Distal3.936349.94105K562EWSR1
chr13137910831379156-intron-Distal3.726685.55220K562CSTF2T
chr13137865031378708-intron-Distal3.645918.15128K562CSTF2T
chr13137558931375657-intron-Distal4.501065.05096K562EWSR1
chr13136761731367713-intron-Distal5.9547457.33514K562HNRNPL
chr13138078031380883-intron-Distal3.499456.77180K562AKAP8L
chr13135405831354113-intron-Distal3.965533.28464K562EWSR1
chr13137938231379427-intron-Distal4.705648.60100K562EIF4G2
chr13136778731367865-intron-Distal7.77835170.68004K562AGGF1
chr13136133231361397-intron-Distal3.224573.25653K562CSTF2T
chr13137976631379809-intron-Distal3.021264.62806K562CSTF2T
chr13135887531358940-intron-Distal3.446193.84340K562CSTF2T
chr13137885731378941-intron-Distal5.2480812.98773K562EIF4G2
chr13136786531367911-intron-Distal7.3908084.95970K562AGGF1
chr13137619431376306-intron-Distal3.912436.68220K562TARDBP
chr13138079331380850-intron-Distal4.624436.48222K562PHF6
chr13137487631374924-intron-Distal3.316533.73797K562CSTF2T
chr13135707931357154-intron-Distal4.263573.48173K562GTF2F1
chr13137572131375770-intron-Distal3.087124.23770K562EIF4G2
chr13135493831355006-intron-Distal3.705274.20405K562EWSR1
chr13136695531367029-intron-Distal3.7149511.09295K562AKAP8L
chr13137976631379835-intron-Distal3.667623.01619K562FUS
chr13136780031367909-intron-Distal5.2208137.40047K562HNRNPL
chr13136795731368009-intron-Distal6.9382391.68817K562AGGF1
chr13135267431352727-intron-Distal,intron-Proximal3.919323.43867K562CSTF2T
chr13137755931377664-intron-Distal5.294869.75980K562CSTF2T
chr13136780631367916-intron-Distal4.191293.43253K562YBX3
chr13136756431367623-intron-Distal6.0475150.73154K562AGGF1
chr13137911631379166-intron-Distal5.9331711.47680K562EIF4G2
chr13135398231354059-intron-Distal3.640793.62708K562CSTF2T
chr13135887131358932-intron-Distal4.022203.58113K562EWSR1
chr13136584831365923-intron-Distal3.649045.55220K562CSTF2T
chr13138027231380362-intron-Distal4.448275.73677K562FUS
chr13136677731366805-intron-Distal8.2943079.88518K562AGGF1
chr13138049931380540-intron-Distal5.1834410.02297K562EIF4G2
chr13136675931366804-intron-Distal4.7550417.15624K562HNRNPL
chr13136721931367261-intron-Distal7.6532841.19275K562AGGF1
chr13136793431368058-intron-Distal6.9377534.83261K562HNRNPL
chr13135401531354132-intron-Distal3.078863.50893K562TARDBP
chr13136695731367040-intron-Distal4.2569319.41367K562HNRNPL
chr13136680531366856-intron-Distal8.2872976.10527K562AGGF1
chr13136628431366298-intron-Distal4.210093.94788K562AKAP8L
chr13138061831380679-intron-Distal4.806424.59460K562AKAP8L
chr13136802531368056-intron-Distal8.2852979.30486K562AGGF1
chr13136680431366860-intron-Distal5.4740622.86654K562HNRNPL
chr13136665631366685-intron-Distal7.2124537.18695K562AGGF1
chr13138054331380598-intron-Distal4.599736.16396K562NONO
chr13136692331367050-intron-Distal4.681885.82137K562YBX3
chr13138027031380351-intron-Distal4.007244.93080K562AKAP8L
chr13135378231353871-intron-Distal4.437243.86024K562EWSR1
chr13138050231380610-intron-Distal4.930425.13875K562DDX6
chr13137807831378141-intron-Distal4.069916.87384K562CSTF2T
chr13137565531375721-intron-Distal3.042804.67105K562EIF4G2
chr13135885831358950-intron-Distal4.7279310.10968K562GTF2F1
chr13136609031366145-intron-Distal3.283013.41462K562EWSR1
chr13138075431380853-intron-Distal4.554599.83092K562NONO
chr13136800931368072-intron-Distal4.7018510.67439K562AKAP8L
chr13136664131366697-intron-Distal5.4563511.83813K562HNRNPL
chr13137936531379432-intron-Distal3.909423.80946K562DDX52
chr13138053731380597-intron-Distal4.0627610.39408K562DROSHA
chr13136131131361383-intron-Distal4.492754.75718K562EWSR1
chr13136583131365948-intron-Distal3.781388.82082K562NONO
chr13136689431366925-intron-Distal4.359904.07596K562GTF2F1
chr13136707831367123-intron-Distal6.9621059.80574K562AGGF1
chr13137565531375705-intron-Distal3.365874.02206K562CSTF2T
chr13138054031380602-intron-Distal4.3452313.89671K562EIF4G2
chr13136675231366777-intron-Distal6.6644446.91470K562AGGF1
chr13138026431380327-intron-Distal5.4212127.81453K562EIF4G2
chr13136610831366133-intron-Distal6.4155915.23193K562AGGF1
chr13138015831380218-intron-Distal4.9407311.73806K562EIF4G2
chr13135402931354120-intron-Distal5.9301310.00047K562EIF4G2
chr13138054531380636-intron-Distal4.326346.37070K562EWSR1
chr13138053731380664-intron-Distal4.491314.70015K562DHX30
chr13137876431378811-intron-Distal3.631823.21586K562DDX52
chr13136762331367701-intron-Distal6.77801400.00000K562AGGF1
chr13137808831378156-intron-Distal4.768408.60100K562EIF4G2
chr13135708831357130-intron-Distal4.007143.14687K562CSTF2T
chr13136626231366313-intron-Distal4.291024.71107K562CSTF2T
chr13138026631380374-intron-Distal4.0407412.01154K562TARDBP
chr13136795931368043-intron-Distal4.255664.95438K562YBX3
chr13137874931378802-intron-Distal4.251998.64614K562CSTF2T
chr13136735431367453-intron-Distal6.6397187.88246K562AGGF1
chr13137875431378811-intron-Distal4.108946.64618K562EWSR1
chr13136674831366851-intron-Distal6.5717719.74038K562GTF2F1
chr13137565831375704-intron-Distal3.981883.76710K562NONO
chr13137874831378805-intron-Distal4.629478.76214K562EIF4G2
chr13136886431368926-intron-Distal3.096863.91689K562GTF2F1
chr13137609031376130-intron-Distal3.159043.41462K562EWSR1
chr13136800931368025-intron-Distal7.2408976.89639K562AGGF1
chr13138078831380853-intron-Distal4.518454.46189K562GTF2F1
chr13136561631365680-intron-Distal4.462895.42636K562NONO
chr13136769231367800-intron-Distal4.2756014.01660K562AKAP8L
chr13135709431357179-intron-Distal3.377093.15535K562EWSR1
chr13136770731367744-intron-Distal7.1633793.09382K562AGGF1
chr13138077931380852-intron-Distal3.222717.89565K562CSTF2T
chr13135488631354938-intron-Distal4.179953.30336K562EWSR1
chr13137613031376203-intron-Distal3.842976.09610K562EWSR1
chr13137907531379184-intron-Distal4.135004.53229K562FUS
chr13135405931354142-intron-Distal3.916905.12112K562CSTF2T
chr13138025931380333-intron-Distal3.6715211.15631K562CSTF2T
chr13136604231366139-intron-Distal5.259867.80606K562AKAP8L
chr13136607431366134-intron-Distal5.114878.39137K562CSTF2T
chr13135493331354994-intron-Distal4.808606.64314K562CSTF2T
chr13137617831376242-intron-Distal5.187725.62492K562EIF4G2
chr13137742931377510-intron-Distal3.013943.14365K562NONO
chr13138012231380227-intron-Distal4.105199.67373K562CSTF2T
chr13136676431366831-intron-Distal3.012753.24816K562YBX3
chr13136626031366313-intron-Distal3.526185.67615K562GTF2F1
chr13136774431367772-intron-Distal6.6151686.88226K562AGGF1
chr13136816131368233-intron-Distal5.6999212.94490K562HNRNPL
chr13138094831381000-intron-Distal4.893097.47837K562CSTF2T
chr13137908931379158-intron-Distal5.4331711.08933K562EWSR1
chr13136676131366834-intron-Distal3.021264.62806K562CSTF2T
chr13137501631375072-intron-Distal3.562025.02933K562CSTF2T
chr13138080031380842-intron-Distal6.1720812.46423K562EIF4G2
chr13138015531380238-intron-Distal4.472439.72177K562EWSR1
chr13137910531379174-intron-Distal4.646345.54520K562GTF2F1
chr13136778131367923-intron-Distal5.2872322.20836K562GTF2F1
chr13136691931367039-intron-Distal8.67114213.25472K562AGGF1
chr13137557731375641-intron-Distal3.533734.70430K562CSTF2T
chr13136771331367800-intron-Distal5.8147450.14956K562HNRNPL
chr13135465231354724-intron-Distal4.310894.72743K562NONO
chr13136677931366833-intron-Distal5.7089212.11448K562AKAP8L
chr13136792331368035-intron-Distal4.3599015.38595K562GTF2F1
chr13137893531379049-intron-Distal4.446786.09551K562FUS
chr13135469631354817-intron-Distal3.728733.35564K562FUS
chr13135465031354733-intron-Distal3.916906.88653K562CSTF2T
chr13136780031367867-intron-Distal5.9835914.72324K562AKAP8L
chr13136133931361418-intron-Distal4.252163.98553K562NONO
chr13137615331376243-intron-Distal5.3041211.17300K562CSTF2T
chr13135728731357332-intron-Distal3.986393.19125K562GTF2F1
chr13137874831378827-intron-Distal5.3904710.50009K562TARDBP
chr13135401031354130-intron-Distal3.138453.22032K562FUS
chr13136605131366134-intron-Distal4.431633.11728K562FAM120A
chr13137897731379015-intron-Distal3.526835.02933K562CSTF2T
chr13137865431378724-intron-Distal5.202419.81960K562TARDBP
chr13136627831366310-intron-Distal4.663876.79556K562HNRNPL
chr13136762931367692-intron-Distal4.0195510.74436K562AKAP8L
chr13136605131366143-intron-Distal4.962898.56957K562NONO
chr13135546031355534-intron-Distal3.138034.51006K562CSTF2T
chr13138084231380882-intron-Distal5.733219.02011K562EIF4G2
chr13137866831378714-intron-Distal4.228383.31153K562GTF2F1
chr13135490231354991-intron-Distal3.667623.01619K562FUS
chr13136608131366143-intron-Distal5.8109310.92633K562GTF2F1
chr13137573431375779-intron-Distal3.158353.20331K562CSTF2T
chr13137895431379015-intron-Distal3.359903.30889K562GTF2F1
chr13136762131367710-intron-Distal6.0852312.01758K562GTF2F1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SDC3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SDC3 is not available on ENCORE database.

  • 183 RBPs can affect the levels of SDC3.  








The Knockdown/knockout RNA-Seq assay for SDC3 is not available on ENCORE database.





183 RBPs can affect the gene expression of SDC3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SDC3ENSG00000162512.11533.94570249.224001.0991012.4321010.40500HepG2AATF
SDC3ENSG00000162512.11205.33720346.83710-0.756303.921102.81340HepG2ABCF1
SDC3ENSG00000162512.11930.84160194.320302.2600082.7272080.62120HepG2ACO1
SDC3ENSG00000162512.11139.07450449.97000-1.6940021.9426019.63730HepG2ADAR
SDC3ENSG00000162512.111051.41680107.193803.2939054.4471052.56190HepG2AKAP1
SDC3ENSG00000162512.11289.13530195.248100.566303.544802.68960HepG2AKAP8L
SDC3ENSG00000162512.11363.9284088.678802.0369022.7492020.80020HepG2ASCC1
SDC3ENSG00000162512.11459.47060312.930900.554003.491601.92690HepG2ATP5C1
SDC3ENSG00000162512.11479.71840346.100300.470902.133201.31390HepG2BCCIP
SDC3ENSG00000162512.11161.80210300.72530-0.894205.338604.12870HepG2BCLAF1
SDC3ENSG00000162512.11128.46430829.49080-2.690906.235805.37940HepG2BOP1
SDC3ENSG00000162512.111441.19510927.977400.635005.022903.69220HepG2CCAR1
SDC3ENSG00000162512.1123.4136084.25580-1.847403.321302.47900HepG2CIRBP
SDC3ENSG00000162512.11255.86860194.295900.397001.879701.31710HepG2CKAP4
SDC3ENSG00000162512.11325.69800694.05950-1.091505.302704.24120HepG2CNOT7
SDC3ENSG00000162512.11187.80370461.43520-1.2969017.9376015.52750HepG2YBX3
SDC3ENSG00000162512.11131.89820213.77120-0.696603.326702.15620HepG2CSTF2
SDC3ENSG00000162512.11603.78740255.237901.242109.984207.06760HepG2CSTF2T
SDC3ENSG00000162512.11947.65090422.626601.1649012.1931011.02980HepG2CELF1
SDC3ENSG00000162512.11124.55560274.82520-1.141708.625107.49780HepG2DDX21
SDC3ENSG00000162512.1170.73150269.05740-1.9275019.3777017.21120HepG2DDX24
SDC3ENSG00000162512.11179.56990318.38950-0.826203.979302.46610HepG2DDX27
SDC3ENSG00000162512.11382.34380257.771800.568703.253401.74190HepG2DDX28
SDC3ENSG00000162512.11266.37440102.651201.375609.547508.44670HepG2DDX3X
SDC3ENSG00000162512.11601.30960340.480800.820408.686106.51560HepG2DDX52
SDC3ENSG00000162512.11721.98540340.293001.085107.302506.11490HepG2DDX55
SDC3ENSG00000162512.11296.10900864.81250-1.546303.266802.20630HepG2DDX59
SDC3ENSG00000162512.11139.69120285.87360-1.033107.318705.74640HepG2DDX5
SDC3ENSG00000162512.111113.3935088.255603.6570066.6289064.27760HepG2DDX6
SDC3ENSG00000162512.11152.94580437.01510-1.5147019.2137017.06790HepG2DHX30
SDC3ENSG00000162512.1192.80540185.91650-1.002405.678604.77220HepG2DKC1
SDC3ENSG00000162512.11225.76140453.10360-1.0050010.537209.23660HepG2DNAJC21
SDC3ENSG00000162512.111223.56490449.089701.4459057.1291054.46940HepG2DNAJC2
SDC3ENSG00000162512.11504.61770338.531700.575803.749602.45030HepG2EFTUD2
SDC3ENSG00000162512.11598.71010253.174801.2416012.4767010.31800HepG2AGO1
SDC3ENSG00000162512.11212.1729084.766701.323604.878804.10280HepG2EIF2S1
SDC3ENSG00000162512.11461.24720263.076100.810007.221305.43930HepG2EIF2S2
SDC3ENSG00000162512.11558.18190329.674600.759605.560704.31010HepG2EIF3D
SDC3ENSG00000162512.11164.13710259.60790-0.661403.692602.46600HepG2EIF3G
SDC3ENSG00000162512.11645.9820091.242102.8236040.8802038.45930HepG2EIF4B
SDC3ENSG00000162512.11156.75050448.32340-1.5161022.6209020.72790HepG2EIF4G1
SDC3ENSG00000162512.11162.18690429.46860-1.4049015.7590013.93310HepG2EIF4G2
SDC3ENSG00000162512.11101.09160300.42350-1.5713014.6526012.46830HepG2ESF1
SDC3ENSG00000162512.11803.68180596.720800.429503.934303.23870HepG2ETF1
SDC3ENSG00000162512.11478.98180189.901501.3346017.4473015.48520HepG2EWSR1
SDC3ENSG00000162512.11417.86020261.961500.673605.092303.61290HepG2FASTKD2
SDC3ENSG00000162512.111838.48220350.214002.3921059.6196057.00350HepG2FIP1L1
SDC3ENSG00000162512.11122.43040283.23760-1.210107.679505.72460HepG2FKBP4
SDC3ENSG00000162512.11255.43200762.75180-1.578303.304902.19090HepG2FTO
SDC3ENSG00000162512.11609.33070314.297700.955007.464405.70540HepG2FUS
SDC3ENSG00000162512.11592.5725094.590102.6471045.6807043.29180HepG2FXR1
SDC3ENSG00000162512.11461.5620087.688002.3960034.0381031.78870HepG2G3BP1
SDC3ENSG00000162512.11679.05580354.966800.935709.170007.28180HepG2GNB2L1
SDC3ENSG00000162512.11945.72890642.576400.557503.286902.06700HepG2GRSF1
SDC3ENSG00000162512.11551.61790296.371300.896206.010603.86650HepG2GTF2F1
SDC3ENSG00000162512.11427.64190185.531101.2046017.3403015.25560HepG2HDGF
SDC3ENSG00000162512.11149.15960457.44430-1.6167019.8418018.37360HepG2HNRNPA1
SDC3ENSG00000162512.11989.01330417.641801.2436020.0271017.97060HepG2HNRNPA2B1
SDC3ENSG00000162512.11280.91920508.81800-0.857007.517106.42110HepG2HNRNPC
SDC3ENSG00000162512.11303.79950601.22110-0.984808.295705.81580HepG2HNRNPD
SDC3ENSG00000162512.11215.94110886.54580-2.0376039.8645037.70950HepG2HNRNPF
SDC3ENSG00000162512.11316.6465088.927801.8321017.5414015.94050HepG2HNRNPK
SDC3ENSG00000162512.11567.02970413.976400.453804.301803.47450HepG2HNRNPL
SDC3ENSG00000162512.1196.43780824.03330-3.095007.196106.23560HepG2HNRNPLL
SDC3ENSG00000162512.11405.15950241.609800.745705.806404.49020HepG2HNRNPM
SDC3ENSG00000162512.11285.42490505.45430-0.8245010.255509.15030HepG2HNRNPU
SDC3ENSG00000162512.11146.73580873.00570-2.5728056.5203054.01710HepG2IGF2BP1
SDC3ENSG00000162512.11590.2433083.711302.817704.120402.92390HepG2IGF2BP3
SDC3ENSG00000162512.11360.48380516.30550-0.518305.274404.28800HepG2ILF2
SDC3ENSG00000162512.11362.77330676.70590-0.899506.389204.31470HepG2ILF3
SDC3ENSG00000162512.11407.87880661.76530-0.698205.060903.38280HepG2KHDRBS1
SDC3ENSG00000162512.11180.0609089.670401.005704.137402.89020HepG2KHSRP
SDC3ENSG00000162512.11489.76820314.176100.640404.517502.44670HepG2CCAR2
SDC3ENSG00000162512.111510.89690980.233000.624104.966403.84090HepG2LARP4
SDC3ENSG00000162512.11843.87530347.810901.2786020.2768017.54510HepG2LARP7
SDC3ENSG00000162512.11536.8688095.135202.4964035.4473033.39140HepG2MATR3
SDC3ENSG00000162512.111748.03840345.005402.3409026.4060023.49000HepG2METAP2
SDC3ENSG00000162512.11327.13470840.01130-1.360502.685001.73350HepG2MTPAP
SDC3ENSG00000162512.11454.18760237.984100.932304.595803.03200HepG2NAA15
SDC3ENSG00000162512.11209.71750314.48020-0.584503.426401.85390HepG2NIP7
SDC3ENSG00000162512.11916.60840450.630701.0243018.7458016.87800HepG2NOL12
SDC3ENSG00000162512.11101.26300730.53170-2.850806.440505.32570HepG2NSUN2
SDC3ENSG00000162512.11483.18080281.119800.781306.767004.38790HepG2NUP35
SDC3ENSG00000162512.11551.72360353.397000.642604.222201.76500HepG2NUSAP1
SDC3ENSG00000162512.11208.61210634.50340-1.6048014.8336012.74140HepG2PABPC1
SDC3ENSG00000162512.112226.17360500.318502.15350127.15050123.63010HepG2PARN
SDC3ENSG00000162512.11208.6478083.503701.3211010.297909.24560HepG2PCBP1
SDC3ENSG00000162512.11200.58540333.63790-0.734103.932001.93530HepG2PHF6
SDC3ENSG00000162512.11386.82820272.640000.504603.154801.83670HepG2PKM
SDC3ENSG00000162512.11308.18560450.82560-0.548804.504103.58480HepG2PPIL4
SDC3ENSG00000162512.1193.67270401.36150-2.0992035.6393033.51490HepG2PRPF4
SDC3ENSG00000162512.11187.56510312.70710-0.737403.447202.09830HepG2PRPF6
SDC3ENSG00000162512.11478.69980262.484700.866806.550205.36730HepG2PRPF8
SDC3ENSG00000162512.11730.4232084.977903.1035093.5192091.45780HepG2PTBP1
SDC3ENSG00000162512.111977.46440456.626502.11450146.14490143.41350HepG2PUM1
SDC3ENSG00000162512.11777.81980456.297600.769409.658808.44490HepG2PUM2
SDC3ENSG00000162512.11123.76630197.93040-0.677403.604402.92040HepG2PUS1
SDC3ENSG00000162512.11137.1755092.012300.576001.879701.34990HepG2QKI
SDC3ENSG00000162512.11111.38550286.98490-1.365407.358106.23860HepG2RAVER1
SDC3ENSG00000162512.11716.10090288.567501.3112010.695409.17590HepG2RBM15
SDC3ENSG00000162512.11342.62970131.795001.378304.137101.84830HepG2RBM17
SDC3ENSG00000162512.111261.84070498.739901.3391012.5300011.58920HepG2RBM22
SDC3ENSG00000162512.11280.9575083.515001.7501010.921309.64260HepG2RBM25
SDC3ENSG00000162512.11705.73790419.412000.750706.504504.97700HepG2RBM27
SDC3ENSG00000162512.11183.54910340.58180-0.891805.639104.11870HepG2RCC2
SDC3ENSG00000162512.11422.6877094.564102.160105.753105.01790HepG2NELFE
SDC3ENSG00000162512.11312.5729088.088401.8271021.6731020.22660HepG2RECQL
SDC3ENSG00000162512.11206.38680954.85940-2.2099053.3030051.25480HepG2RPLP0
SDC3ENSG00000162512.1178.57060282.09580-1.8441013.7058011.78470HepG2RPS10
SDC3ENSG00000162512.11698.38260320.828901.1221015.7101014.41110HepG2RPS19
SDC3ENSG00000162512.11313.49400697.34850-1.153409.142907.72030HepG2RPS3A
SDC3ENSG00000162512.11657.74290394.848800.736106.082804.48170HepG2RPS5
SDC3ENSG00000162512.11382.21700259.649300.557702.645701.87510HepG2RRP9
SDC3ENSG00000162512.11212.40310450.13190-1.0835014.7318013.42210HepG2SAFB2
SDC3ENSG00000162512.11466.99970656.66370-0.491702.768001.45940HepG2SART3
SDC3ENSG00000162512.11332.02360662.22070-0.996007.296204.92660HepG2SBDS
SDC3ENSG00000162512.11493.08520321.936900.615004.134102.98890HepG2SERBP1
SDC3ENSG00000162512.11355.65050127.381501.481204.913803.00270HepG2SF1
SDC3ENSG00000162512.1172.86750122.40350-0.748302.080701.49470HepG2SF3A3
SDC3ENSG00000162512.11132.06390815.73470-2.626905.934704.93390HepG2SF3B1
SDC3ENSG00000162512.11505.3349088.455402.5141050.6441048.74020HepG2SF3B4
SDC3ENSG00000162512.11414.14590123.553901.744906.138203.81410HepG2SFPQ
SDC3ENSG00000162512.11241.59360412.44120-0.771607.422606.35900HepG2SLBP
SDC3ENSG00000162512.112275.12560524.934102.11560158.63420155.54500HepG2SMN1
SDC3ENSG00000162512.11357.28210113.775301.650806.424204.22220HepG2SNRNP200
SDC3ENSG00000162512.11321.89820907.61040-1.495503.117102.28780HepG2SNRNP70
SDC3ENSG00000162512.1186.11120563.29380-2.7096066.4109064.79600HepG2SRFBP1
SDC3ENSG00000162512.11258.8091092.335501.4868013.1235012.25840HepG2SRSF1
SDC3ENSG00000162512.111179.06040424.711501.4730047.8097045.67680HepG2SRSF5
SDC3ENSG00000162512.11219.40220870.96320-1.9890037.4903035.53040HepG2SRSF7
SDC3ENSG00000162512.11344.1255075.126002.1955035.4976033.94350HepG2SRSF9
SDC3ENSG00000162512.1118.56890489.04690-4.71900105.48430103.54880HepG2SSB
SDC3ENSG00000162512.111267.48140483.021701.3917015.4735014.19660HepG2SUCLG1
SDC3ENSG00000162512.11118.17010236.45010-1.000706.865105.42680HepG2SUPT6H
SDC3ENSG00000162512.11190.30230338.74950-0.831904.827403.97170HepG2SUPV3L1
SDC3ENSG00000162512.1142.3123083.01460-0.972302.834502.26750HepG2TAF15
SDC3ENSG00000162512.11324.80300802.69750-1.305302.644601.93350HepG2TARDBP
SDC3ENSG00000162512.11156.40740299.76220-0.938503.666902.44510HepG2TBRG4
SDC3ENSG00000162512.11343.5238076.258002.1713031.2694028.54830HepG2TIA1
SDC3ENSG00000162512.11359.94130491.15920-0.448403.094202.57030HepG2TIAL1
SDC3ENSG00000162512.11887.02550288.329201.621205.844303.75390HepG2TRA2A
SDC3ENSG00000162512.111567.40440495.532701.6612073.2948070.97920HepG2TRIM56
SDC3ENSG00000162512.11156.33190299.56460-0.938305.998705.08980HepG2U2AF1
SDC3ENSG00000162512.11154.26140310.17260-1.007705.809304.31450HepG2UPF2
SDC3ENSG00000162512.11260.05430111.572701.2207010.606908.71840HepG2UTP18
SDC3ENSG00000162512.11319.94290624.63940-0.965207.965806.11120HepG2XPO5
SDC3ENSG00000162512.11660.93160282.387001.2267010.683008.29920HepG2XRCC5
SDC3ENSG00000162512.1181.86220333.46200-2.0263021.1133019.19490HepG2XRN2
SDC3ENSG00000162512.11138.36430396.07630-1.5173022.5086020.92520HepG2ZC3H8
SDC3ENSG00000162512.1170.81660119.38750-0.753502.053801.56370HepG2ZNF622
SDC3ENSG00000162512.11958.001201300.31200-0.440804.108402.63380K562AARS
SDC3ENSG00000162512.112667.105504332.76670-0.7000025.0093023.41180K562AGGF1
SDC3ENSG00000162512.113437.190904760.82950-0.470006.181604.57160K562AKAP8
SDC3ENSG00000162512.111695.251204508.38450-1.4111045.8625042.69490K562AKAP8L
SDC3ENSG00000162512.112460.999004730.27550-0.9427033.8214030.42420K562ATP5C1
SDC3ENSG00000162512.111661.402901230.381100.433206.081304.01970K562BCCIP
SDC3ENSG00000162512.111455.159001188.961400.291403.265102.21950K562BCLAF1
SDC3ENSG00000162512.113598.573702183.000000.7210010.824809.05220K562BOP1
SDC3ENSG00000162512.112650.103801804.403900.554405.694803.58870K562BUD13
SDC3ENSG00000162512.111831.801701294.764400.500502.532301.53250K562CCAR1
SDC3ENSG00000162512.114558.105702958.583500.623406.011503.78940K562CKAP4
SDC3ENSG00000162512.113021.375602321.139200.380304.640803.62710K562CPSF6
SDC3ENSG00000162512.111395.49280902.004300.629509.923407.75450K562CSTF2
SDC3ENSG00000162512.114071.041703365.647400.274402.637701.68540K562CELF1
SDC3ENSG00000162512.111566.333701168.625600.422504.483203.11040K562DDX3X
SDC3ENSG00000162512.111849.296202768.67360-0.5822014.6395013.25680K562DDX47
SDC3ENSG00000162512.111528.357701184.798800.367202.932801.57240K562DDX6
SDC3ENSG00000162512.111940.983101449.575600.421103.782802.18520K562DHX30
SDC3ENSG00000162512.113423.945404851.69350-0.5028011.647909.61390K562DKC1
SDC3ENSG00000162512.111600.212701094.436800.548004.473403.29570K562EFTUD2
SDC3ENSG00000162512.111568.058701283.492400.288803.176901.87040K562EIF2S1
SDC3ENSG00000162512.113701.214801664.170101.1531031.2551029.32250K562EIF2S2
SDC3ENSG00000162512.111401.297001099.411200.349903.715302.34410K562EIF4B
SDC3ENSG00000162512.112623.612001937.518000.437205.528003.69770K562EXOSC5
SDC3ENSG00000162512.113623.679302361.735300.617503.668102.67940K562FMR1
SDC3ENSG00000162512.11562.72810718.00190-0.351502.819301.46440K562FUS
SDC3ENSG00000162512.11931.459401269.64680-0.446905.971105.13180K562FXR1
SDC3ENSG00000162512.11331.08490656.05320-0.986605.102004.07570K562G3BP2
SDC3ENSG00000162512.111754.622301097.289200.677106.300004.16220K562GEMIN5
SDC3ENSG00000162512.112743.215402216.103800.307702.749701.95760K562GPKOW
SDC3ENSG00000162512.111850.942701270.329100.543006.957705.07100K562HNRNPF
SDC3ENSG00000162512.111894.835002502.16900-0.401104.579003.18450K562HNRNPL
SDC3ENSG00000162512.11906.134801531.64450-0.757308.461106.68460K562HNRNPM
SDC3ENSG00000162512.114667.633402524.667800.8865017.9360016.03360K562HSPD1
SDC3ENSG00000162512.111487.653801100.639700.434602.963201.89120K562IGF2BP2
SDC3ENSG00000162512.111591.741401119.315100.507905.691903.87340K562IGF2BP3
SDC3ENSG00000162512.11993.691401352.81090-0.445103.233001.61150K562ILF3
SDC3ENSG00000162512.112813.739304784.71770-0.765907.983706.39590K562KIF1C
SDC3ENSG00000162512.113311.715001892.310100.807303.255602.23470K562KRR1
SDC3ENSG00000162512.112074.862001443.005200.523805.164603.04690K562LIN28B
SDC3ENSG00000162512.114574.995305360.06520-0.228502.125801.34460K562MBNL1
SDC3ENSG00000162512.111983.653603757.00040-0.921406.961905.32510K562NAA15
SDC3ENSG00000162512.113171.814102509.662800.337708.677507.45870K562NSUN2
SDC3ENSG00000162512.11761.502501028.71290-0.433903.582702.47270K562PCBP2
SDC3ENSG00000162512.111929.059802464.50820-0.353402.444301.66440K562PCBP3
SDC3ENSG00000162512.111445.688601890.29240-0.386903.513102.60380K562POLR2G
SDC3ENSG00000162512.113076.857802047.160400.587703.635801.54690K562PPIL4
SDC3ENSG00000162512.11728.164401065.02370-0.548502.996302.21580K562PRPF8
SDC3ENSG00000162512.111721.056401275.288900.432404.214003.06320K562PSIP1
SDC3ENSG00000162512.112040.792102985.91640-0.549008.225606.81730K562PUF60
SDC3ENSG00000162512.113957.838503111.818600.346904.971703.67220K562PUM2
SDC3ENSG00000162512.111547.716304471.47860-1.5306045.1375042.86740K562PUS1
SDC3ENSG00000162512.11257.89820625.84860-1.279008.389305.86880K562RAVER1
SDC3ENSG00000162512.111953.967704356.45220-1.1567046.7766044.23780K562RBM15
SDC3ENSG00000162512.111425.735601050.042200.441203.673402.00110K562RBM34
SDC3ENSG00000162512.113769.952302306.789000.708603.054101.41660K562RBM39
SDC3ENSG00000162512.111489.871601163.843000.356203.423802.32390K562RCC2
SDC3ENSG00000162512.11701.905101084.54270-0.627703.696002.74880K562RPS19
SDC3ENSG00000162512.113728.483302476.398900.5902014.3589012.61280K562SF3A3
SDC3ENSG00000162512.113204.171702107.640400.604202.958001.95150K562SF3B1
SDC3ENSG00000162512.111775.240201425.894700.316002.505401.30940K562SLBP
SDC3ENSG00000162512.111827.403401103.260200.7279010.176207.86000K562SRFBP1
SDC3ENSG00000162512.111566.769001063.900000.558304.956402.70540K562SRP68
SDC3ENSG00000162512.113099.793202537.124300.288904.302603.16260K562SRPK2
SDC3ENSG00000162512.112193.044601407.697200.639508.002506.08380K562SRSF4
SDC3ENSG00000162512.111533.870001040.299700.560105.371403.81930K562SRSF5
SDC3ENSG00000162512.111389.491301896.10840-0.448505.814904.61720K562SYNCRIP
SDC3ENSG00000162512.111504.465001114.560600.432703.763702.93330K562TARDBP
SDC3ENSG00000162512.111834.756601075.148600.7710014.1656012.18900K562TIA1
SDC3ENSG00000162512.111547.839801226.577400.335502.228201.39670K562TIAL1
SDC3ENSG00000162512.111540.960201055.301900.546106.162104.37820K562TRA2A
SDC3ENSG00000162512.112575.266301303.422600.9823010.619008.48130K562TRIM56
SDC3ENSG00000162512.113461.032502719.595100.347706.180704.25470K562TROVE2
SDC3ENSG00000162512.11495.62810656.39600-0.405302.394701.64770K562U2AF2
SDC3ENSG00000162512.111779.508701091.066700.705608.347406.50670K562UCHL5
SDC3ENSG00000162512.113108.022802661.048800.223902.916902.17920K562UPF1
SDC3ENSG00000162512.112626.995604533.21050-0.787104.820302.94640K562UTP18
SDC3ENSG00000162512.11757.791201762.64410-1.217909.885606.66860K562XRCC6
SDC3ENSG00000162512.111797.121401111.439500.693207.539705.24670K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SDC3 is not available on ENCORE database.





3 RBPs can affect the splicing of SDC3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
RISDC3ENSG00000162512.11chr1-3134939831351587313493983135001231351469313515870.139000.005770.09469includedK562HNRNPC
RISDC3ENSG00000162512.11chr1-3134939831351587313493983135001231351469313515870.118000.000400.03197includedK562EIF4G2
RISDC3ENSG00000162512.11chr1-3134939831351587313493983135001231351469313515870.200000.001620.01045includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SDC3 is not avaliable on ENCORE database.