SORD

General Information

Gene Name       : SORD
Gene ID             : ENSG00000140263.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SORD)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SORDENSG00000140263.1318.5926.8322.71ENCSR000AEF
HepG2SORDENSG00000140263.13125.5894.07109.82ENCSR985KAT
K562SORDENSG00000140263.1327.7425.3626.55ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SORD is not avaliable on ENCORE database.



Proteins bound to RNA
  • SORD RNA is bound by 9 proteins.  







eCLIP assay for SORD is not avaliable on ENCORE database.





9 proteins are bound to SORD RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr154536644145366523+3'-UTR4.015323.61011HepG2AKAP1
chr154536584045365898+3'-UTR5.462829.47550K562UPF1
chr154536119845361295+3'-UTR,CDS,intron-Proximal3.340849.78963HepG2PRPF8
chr154536037645360442+3'-UTR,CDS,intron-Proximal3.649094.59151HepG2G3BP1
chr154536655245366632+3'-UTR3.510937.60286K562UPF1
chr154536654145366646+3'-UTR3.518786.24912HepG2UPF1
chr154535748145357516+3'-UTR,CDS4.9304427.45945K562YBX3
chr154535751645357544+3'-UTR,CDS5.5227827.82866K562YBX3
chr154536644445366541+3'-UTR5.172067.69327HepG2UPF1
chr154535333245353346+3'-UTR,CDS,intron-Distal3.086018.35067K562YBX3
chr154536644645366502+3'-UTR3.465058.42351K562FAM120A
chr154536583445365891+3'-UTR4.016244.43788HepG2SUB1
chr154536650245366530+3'-UTR3.791787.04160K562FAM120A
chr154536643545366543+3'-UTR4.1031111.25148K562UPF1
chr154536677845366841+3'-UTR3.674358.43159K562YBX3
chr154531538445315484+5'-UTR,CDS4.501276.15796HepG2DDX3X
chr154533036645330416+intron-Distal4.007306.77443HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SORD is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SORD is not available on ENCORE database.

  • 158 RBPs can affect the levels of SORD.  








The Knockdown/knockout RNA-Seq assay for SORD is not available on ENCORE database.





158 RBPs can affect the gene expression of SORD :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SORDENSG00000140263.93880.303502562.705400.598407.127105.70990HepG2ABCF1
SORDENSG00000140263.91369.301202011.38090-0.5547013.2836012.16030HepG2ACO1
SORDENSG00000140263.92248.575301575.116600.513505.477404.13940HepG2ADAR
SORDENSG00000140263.91664.618305626.93490-1.7572044.1244042.37980HepG2AKAP1
SORDENSG00000140263.91718.348202020.85470-0.233902.668301.91400HepG2AKAP8L
SORDENSG00000140263.91791.052802313.00940-0.369003.280201.75840HepG2ATP5C1
SORDENSG00000140263.92234.076903447.67820-0.6259018.1003016.63200HepG2AUH
SORDENSG00000140263.91626.366202060.74100-0.341502.649601.73460HepG2BCCIP
SORDENSG00000140263.91158.580002037.44280-0.8144013.3991012.21850HepG2BOP1
SORDENSG00000140263.91745.943302584.48830-0.565909.617208.30480HepG2CALR
SORDENSG00000140263.95801.246804423.359900.391103.815002.91580HepG2CIRBP
SORDENSG00000140263.92384.156402010.972400.245503.762203.00950HepG2CKAP4
SORDENSG00000140263.91290.908902002.19610-0.633204.091803.15420HepG2CNOT7
SORDENSG00000140263.91553.083802110.73490-0.442604.976203.52050HepG2CPSF7
SORDENSG00000140263.92105.635001272.545400.726409.608407.80340HepG2CSTF2
SORDENSG00000140263.92319.086402874.17870-0.309604.379403.60370HepG2CELF1
SORDENSG00000140263.92510.907103090.46770-0.299606.046005.01080HepG2DAZAP1
SORDENSG00000140263.92815.964901860.252300.5980018.7415017.02320HepG2DDX19B
SORDENSG00000140263.93161.331602303.036900.456906.340804.96420HepG2DDX24
SORDENSG00000140263.92165.834105390.22590-1.3154030.4107028.58060HepG2DDX3X
SORDENSG00000140263.91392.300501806.24280-0.375503.908602.31920HepG2DDX52
SORDENSG00000140263.91511.621002124.06940-0.490702.323601.43080HepG2DDX59
SORDENSG00000140263.91585.157502319.58660-0.549206.332504.86150HepG2DDX5
SORDENSG00000140263.91157.288004630.20270-2.0003054.5042052.30950HepG2DDX6
SORDENSG00000140263.94335.614401924.353901.1718061.7656059.68680HepG2DKC1
SORDENSG00000140263.91255.530001586.07360-0.337203.930703.10500HepG2DNAJC21
SORDENSG00000140263.92990.126302154.915300.472504.827403.64060HepG2EEF2
SORDENSG00000140263.91125.131501796.29700-0.674908.363406.43490HepG2EFTUD2
SORDENSG00000140263.91707.746904451.23820-1.3821032.8282030.94880HepG2EIF2S1
SORDENSG00000140263.91201.834201749.22210-0.541504.896603.71880HepG2EIF3D
SORDENSG00000140263.92900.183702222.532900.383804.661403.30430HepG2EIF3G
SORDENSG00000140263.92896.785304919.19560-0.764009.626108.44520HepG2EIF4A3
SORDENSG00000140263.92760.642804789.42390-0.794808.158507.00800HepG2EIF4B
SORDENSG00000140263.94307.921703048.918900.4986012.9432011.39760HepG2EIF4G1
SORDENSG00000140263.91812.211902920.67230-0.6885010.345508.81940HepG2EIF4G2
SORDENSG00000140263.93730.756302220.136300.7487012.9060010.84950HepG2ESF1
SORDENSG00000140263.93099.369603958.57860-0.353007.207506.31360HepG2ETF1
SORDENSG00000140263.91087.762901563.54600-0.523507.278105.37260HepG2FAM120A
SORDENSG00000140263.91510.526602242.87140-0.570308.186006.42000HepG2FASTKD2
SORDENSG00000140263.91485.921302587.77640-0.800409.477508.16420HepG2FIP1L1
SORDENSG00000140263.9958.779701873.69220-0.966604.936803.58300HepG2FTO
SORDENSG00000140263.92297.715203201.08720-0.478406.310005.15130HepG2FUBP3
SORDENSG00000140263.92435.659704963.09830-1.0269019.8427018.17030HepG2FXR1
SORDENSG00000140263.92073.698304604.08760-1.1507021.7261019.93640HepG2G3BP1
SORDENSG00000140263.96718.374304887.716600.458904.974603.77110HepG2G3BP2
SORDENSG00000140263.92057.014001557.430000.401303.277102.29170HepG2GEMIN5
SORDENSG00000140263.91363.285202073.58390-0.605007.330505.65940HepG2GNB2L1
SORDENSG00000140263.93113.494102120.329100.554102.510001.89720HepG2GPKOW
SORDENSG00000140263.91776.741502521.10720-0.504803.042101.38280HepG2GTF2F1
SORDENSG00000140263.91558.698301920.31030-0.301004.045902.87920HepG2HDGF
SORDENSG00000140263.91799.012302564.28600-0.511402.680301.34100HepG2HLTF
SORDENSG00000140263.94040.790001601.268401.3353042.1174040.20320HepG2HNRNPA1
SORDENSG00000140263.91899.871102840.21870-0.5801014.1919012.40880HepG2HNRNPA2B1
SORDENSG00000140263.92773.609504661.85450-0.7491012.9508011.54610HepG2HNRNPK
SORDENSG00000140263.91173.464601785.61830-0.605608.517406.99960HepG2HNRNPM
SORDENSG00000140263.92062.486201769.334200.221102.549901.96780HepG2HNRNPU
SORDENSG00000140263.92420.398302038.950400.247302.375101.70220HepG2IGF2BP1
SORDENSG00000140263.92702.774304679.98510-0.7921012.1788010.87470HepG2IGF2BP2
SORDENSG00000140263.91903.817004391.84050-1.205906.578405.10290HepG2IGF2BP3
SORDENSG00000140263.91582.640701807.31730-0.191502.417701.72700HepG2ILF2
SORDENSG00000140263.91416.202501951.78610-0.462802.742501.43360HepG2ILF3
SORDENSG00000140263.93417.308904707.20800-0.462003.345202.23080HepG2KHSRP
SORDENSG00000140263.91508.533403084.49340-1.0319012.3492010.60630HepG2LARP4
SORDENSG00000140263.91433.404902031.87660-0.503406.355804.65990HepG2LARP7
SORDENSG00000140263.92600.322104964.83020-0.9331015.9757014.46100HepG2MAGOH
SORDENSG00000140263.92948.339204992.64450-0.759909.797008.66720HepG2MATR3
SORDENSG00000140263.91290.941401830.65590-0.503903.069801.96050HepG2METAP2
SORDENSG00000140263.91542.747702094.63690-0.441204.936303.87680HepG2MSI2
SORDENSG00000140263.92175.329705110.27090-1.2322025.6517023.86130HepG2NCBP2
SORDENSG00000140263.92354.881903064.50030-0.380005.424204.36350HepG2NOL12
SORDENSG00000140263.92784.166301794.197900.633809.026807.73400HepG2NSUN2
SORDENSG00000140263.9871.542401829.77210-1.070009.205807.54220HepG2PABPC1
SORDENSG00000140263.92008.371704551.12910-1.1802023.9773021.90630HepG2PABPC4
SORDENSG00000140263.91297.718101751.34500-0.432507.049305.79740HepG2PARN
SORDENSG00000140263.93851.870704951.49890-0.362307.938306.99510HepG2PCBP1
SORDENSG00000140263.91841.045501578.105700.222202.074201.42830HepG2PPIL4
SORDENSG00000140263.93232.875102182.002900.5671014.1617012.62170HepG2PRPF4
SORDENSG00000140263.92210.510905038.22060-1.1885067.0335065.18970HepG2PTBP1
SORDENSG00000140263.93434.581302048.726100.7453028.9043027.30270HepG2PUS1
SORDENSG00000140263.92873.548705456.76190-0.9252032.2561030.49070HepG2QKI
SORDENSG00000140263.91039.460402443.67620-1.2332011.9753010.58490HepG2RAVER1
SORDENSG00000140263.91863.777002500.22530-0.423805.595904.42930HepG2RBM15
SORDENSG00000140263.92302.781703308.60110-0.522807.057306.31950HepG2RBM22
SORDENSG00000140263.91609.454304952.26970-1.6215068.6651065.77570HepG2RBM25
SORDENSG00000140263.92692.053401989.660100.436102.285601.32390HepG2RCC2
SORDENSG00000140263.93326.978705607.15110-0.7531030.4051029.01660HepG2NELFE
SORDENSG00000140263.94533.817005222.12630-0.203903.037902.39600HepG2RECQL
SORDENSG00000140263.92730.144502230.382500.291602.573701.91130HepG2RPLP0
SORDENSG00000140263.92823.990602009.786400.490603.420702.53070HepG2RPS3A
SORDENSG00000140263.9875.103301545.46690-0.820509.765808.41940HepG2RRP9
SORDENSG00000140263.91267.613501575.67370-0.313904.385003.60670HepG2SAFB2
SORDENSG00000140263.92133.905903000.76020-0.491803.399102.64910HepG2SF3A3
SORDENSG00000140263.91026.135802002.83140-0.9648017.5168015.90790HepG2SF3B1
SORDENSG00000140263.91996.628905245.64370-1.3936093.1330090.67570HepG2SF3B4
SORDENSG00000140263.94243.193702804.920000.5971023.6019021.95520HepG2SLBP
SORDENSG00000140263.91485.544501837.50730-0.306805.079704.25170HepG2SMN1
SORDENSG00000140263.91823.565502492.08660-0.450602.899801.91870HepG2SMNDC1
SORDENSG00000140263.92007.256003736.87590-0.8966042.1550040.80480HepG2SRFBP1
SORDENSG00000140263.93232.009005475.23240-0.7605034.7081033.44640HepG2SRSF1
SORDENSG00000140263.92092.708202888.32750-0.4649010.072108.97940HepG2SRSF5
SORDENSG00000140263.91639.086304454.32080-1.44230101.4708099.16180HepG2SRSF9
SORDENSG00000140263.97019.845003244.375401.1134071.2533069.54710HepG2SSB
SORDENSG00000140263.91024.918601728.70080-0.754206.480504.68380HepG2STAU1
SORDENSG00000140263.91360.576102283.69740-0.747205.937304.19160HepG2SUB1
SORDENSG00000140263.92583.307803284.83090-0.346607.319206.38880HepG2SUCLG1
SORDENSG00000140263.93218.233604921.11920-0.6127016.4182015.21760HepG2TAF15
SORDENSG00000140263.92518.731901972.274600.352701.958401.33510HepG2TARDBP
SORDENSG00000140263.93435.210802230.888500.622702.804501.73040HepG2TBRG4
SORDENSG00000140263.9582.984201351.74270-1.2133015.0762013.14330HepG2TFIP11
SORDENSG00000140263.92074.597004522.08550-1.1242036.7692033.85170HepG2TIA1
SORDENSG00000140263.92310.094501719.259800.426105.850105.17400HepG2TIAL1
SORDENSG00000140263.93396.481102857.910900.249002.298401.50800HepG2TUFM
SORDENSG00000140263.91584.836602213.82260-0.482204.800903.98650HepG2U2AF1
SORDENSG00000140263.92097.933403025.04650-0.528004.875703.74470HepG2UBE2L3
SORDENSG00000140263.9745.354001191.31400-0.676606.723205.52810HepG2UCHL5
SORDENSG00000140263.91955.455002661.20840-0.444609.875008.69620HepG2UPF1
SORDENSG00000140263.93543.684602735.403000.373406.690205.13160HepG2UTP18
SORDENSG00000140263.92072.104302569.30300-0.310305.006404.24130HepG2UTP3
SORDENSG00000140263.91592.878602403.14210-0.593304.460102.84900HepG2XRCC5
SORDENSG00000140263.91805.083702687.48170-0.574204.209202.91010HepG2XRCC6
SORDENSG00000140263.94105.024901985.437001.0478018.5824016.76240HepG2XRN2
SORDENSG00000140263.92550.135402153.433600.243803.222802.50760HepG2ZC3H8
SORDENSG00000140263.91603.202402926.82980-0.8684042.0401040.56550HepG2ZNF622
SORDENSG00000140263.91139.834001436.44560-0.333702.793601.60750K562AARS
SORDENSG00000140263.92693.913201926.184300.4839010.424909.41490K562AGGF1
SORDENSG00000140263.92880.010302116.529400.444305.088303.65810K562AKAP8
SORDENSG00000140263.92678.305902004.268300.418104.507903.66660K562AKAP8L
SORDENSG00000140263.91821.401802701.01440-0.568508.618406.35410K562APOBEC3C
SORDENSG00000140263.92015.159701718.183200.229902.380401.49120K562BCLAF1
SORDENSG00000140263.91347.95730908.446800.569203.605802.36800K562CCAR1
SORDENSG00000140263.92626.314302024.710300.375204.384702.47150K562CEBPZ
SORDENSG00000140263.93466.003202596.475500.416603.342301.73810K562CKAP4
SORDENSG00000140263.95203.136703764.114300.467008.000006.37640K562CELF1
SORDENSG00000140263.93139.083102327.245000.431607.436605.42600K562DDX21
SORDENSG00000140263.92695.616302297.647800.230402.772802.12140K562DDX47
SORDENSG00000140263.91472.471101017.047500.533805.220303.28000K562DHX30
SORDENSG00000140263.91130.885901948.31500-0.7848019.2203017.57970K562EIF2S2
SORDENSG00000140263.9969.118101561.41250-0.688105.599604.05820K562EIF3D
SORDENSG00000140263.92337.532601873.127000.319402.676301.84210K562FIP1L1
SORDENSG00000140263.91781.808301364.808900.384502.884501.73340K562FKBP4
SORDENSG00000140263.91549.358101982.56590-0.355703.046202.14480K562FMR1
SORDENSG00000140263.91160.930001484.41110-0.354604.190803.46890K562FXR1
SORDENSG00000140263.92781.242501724.812400.689208.897206.94390K562GLRX3
SORDENSG00000140263.93548.778402260.158800.650804.034101.87500K562HNRNPA0
SORDENSG00000140263.93118.758602274.409500.455406.249604.67190K562HNRNPA1
SORDENSG00000140263.91089.241901537.41460-0.497204.537802.92340K562HNRNPK
SORDENSG00000140263.9822.658301540.65100-0.9052011.636609.39610K562HNRNPM
SORDENSG00000140263.91883.522102539.59450-0.431204.576503.55910K562HSPD1
SORDENSG00000140263.91343.39400949.156300.501104.455202.55140K562ILF3
SORDENSG00000140263.91216.49640917.152700.407403.086501.51930K562KHDRBS1
SORDENSG00000140263.93422.944102127.077800.686306.690205.27940K562KIF1C
SORDENSG00000140263.92124.290701813.406800.228202.676901.88070K562MTPAP
SORDENSG00000140263.92139.326801670.206400.357002.064601.32620K562NAA15
SORDENSG00000140263.91126.123801425.31090-0.339903.204201.87570K562NCBP2
SORDENSG00000140263.93411.971402014.905400.7598038.8239036.59200K562NSUN2
SORDENSG00000140263.91175.606901439.42870-0.292102.199401.33160K562PCBP2
SORDENSG00000140263.93966.267802779.851400.512705.279704.12730K562PCBP3
SORDENSG00000140263.92808.110102132.169600.397205.014603.93330K562POLR2G
SORDENSG00000140263.9929.386701419.42640-0.611006.806705.62930K562PRPF8
SORDENSG00000140263.91149.915201408.97840-0.293102.518401.66230K562PSIP1
SORDENSG00000140263.91011.251801571.82470-0.636309.698208.50960K562PTBP1
SORDENSG00000140263.92121.798603339.85160-0.6545010.300608.70790K562PUF60
SORDENSG00000140263.92424.382001987.782800.286402.347701.83920K562PUS1
SORDENSG00000140263.93231.565901936.713200.7385018.6903017.11240K562RBM15
SORDENSG00000140263.91205.857101586.00600-0.395303.244202.05070K562NELFE
SORDENSG00000140263.91297.796501053.951300.300203.669701.85060K562RPS10
SORDENSG00000140263.93512.523902246.928500.644504.653702.55680K562RPS3A
SORDENSG00000140263.92453.926501451.035200.757907.149205.04740K562RRP9
SORDENSG00000140263.91309.368501769.30540-0.434303.213502.16290K562SF3B1
SORDENSG00000140263.9966.874501291.00060-0.417104.409203.31880K562SF3B4
SORDENSG00000140263.91671.240501000.487300.7401010.286807.98740K562SLBP
SORDENSG00000140263.92543.027902036.872300.320104.590403.41900K562SRPK2
SORDENSG00000140263.91166.547001540.93050-0.401604.246403.37820K562SRSF1
SORDENSG00000140263.92705.126802077.007600.381105.695003.99740K562SRSF7
SORDENSG00000140263.91406.411501103.799600.349404.050202.45680K562SSB
SORDENSG00000140263.93268.743102457.694900.411304.061102.39250K562SSRP1
SORDENSG00000140263.93958.840302914.036100.442006.784304.58780K562SUCLG1
SORDENSG00000140263.91522.766502138.72010-0.490105.460004.29900K562SYNCRIP
SORDENSG00000140263.92227.532601355.176600.716908.999307.24040K562TIAL1
SORDENSG00000140263.91953.973201439.929000.440302.760701.81700K562TRIM56
SORDENSG00000140263.92729.746101828.093100.578309.203807.56580K562WDR3
SORDENSG00000140263.93019.371201900.962400.6674022.8549020.78050K562WDR43
SORDENSG00000140263.94548.594303136.343800.536208.748306.53150K562WRN
SORDENSG00000140263.94504.433102980.796400.595509.548507.83250K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SORD is not available on ENCORE database.





3 RBPs can affect the splicing of SORD :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESORDENSG00000140263.9chr15+453531794535342445335400453356194535746845357587-0.052000.008980.07453excludedK562AQR
SESORDENSG00000140263.9chr15+453531794535342445335454453356194535746845357587-0.157000.003040.04712excludedK562HNRNPC
A5SSSORDENSG00000140263.9chr15+453610744536125045361074453611764536205645362223-0.059000.000260.02136shorterHepG2HNRNPK

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SORD is not avaliable on ENCORE database.