RP11-529K1.3

General Information

Gene Name : RP11-529K1.3
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-529K1.3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-529K1.3 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-529K1.3 RNA is bound by 15 proteins.

eCLIP assay for RP11-529K1.3 is not avaliable on ENCORE database.

15 proteins are bound to RP11-529K1.3 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	70333094	70333165	+	5'-UTR,intron-Distal	4.27962	4.78731	HepG2	NCBP2
chr16	70384457	70384509	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.38441	3.05161	HepG2	PPIG
chr16	70381312	70381389	+	intron-Distal	3.64871	5.08047	HepG2	QKI
chr16	70338924	70339005	+	intron-Distal	3.76106	3.04224	HepG2	SUGP2
chr16	70363963	70364022	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.84467	6.26248	HepG2	PRPF8
chr16	70389395	70389439	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.30554	4.44454	K562	UCHL5
chr16	70389400	70389508	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.72183	5.17615	K562	AQR
chr16	70390062	70390154	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.98720	7.03378	HepG2	GRWD1
chr16	70380821	70380952	+	5'-UTR,CDS,intron-Distal,intron-Proximal	4.02851	20.57840	K562	DDX3X
chr16	70367466	70367601	+	3'-UTR,CDS,intron-Distal	3.48030	3.80299	HepG2	GRWD1
chr16	70380801	70380868	+	5'-UTR,intron-Distal	5.55369	8.17272	HepG2	DDX3X
chr16	70394238	70394287	+	intron-Distal	4.18346	3.80060	HepG2	HNRNPC
chr16	70335018	70335136	+	intron-Distal	5.63577	10.55181	HepG2	PTBP1
chr16	70389381	70389446	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.66530	6.67313	HepG2	BCLAF1
chr16	70380868	70380948	+	5'-UTR,CDS,intron-Distal	4.07079	5.22400	HepG2	DDX3X
chr16	70396456	70396588	+	intron-Distal	4.34256	3.82619	K562	ILF3
chr16	70398540	70398599	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.14851	7.92471	HepG2	PRPF8
chr16	70380944	70381025	+	CDS,intron-Distal,intron-Proximal	4.85334	5.17615	K562	AQR
chr16	70370456	70370533	+	intron-Distal	5.04037	5.47569	HepG2	U2AF2
chr16	70335002	70335144	+	intron-Distal	4.34224	6.98272	HepG2	MATR3
chr16	70398429	70398484	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.68997	5.55825	HepG2	U2AF2
chr16	70390011	70390040	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.96330	3.32022	K562	UCHL5
chr16	70363776	70363869	+	3'-UTR,CDS,intron-Distal	4.05408	4.04622	HepG2	GRWD1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-529K1.3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-529K1.3 is not available on ENCORE database.
96 RBPs can affect the levels of RP11-529K1.3.

The Knockdown/knockout RNA-Seq assay for RP11-529K1.3 is not available on ENCORE database.

96 RBPs can affect the gene expression of RP11-529K1.3 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-529K1.3	ENSG00000260537.1	148.11090	41.45920	1.83680	2.01630	1.55400	HepG2	AKAP1
RP11-529K1.3	ENSG00000260537.1	87.56180	36.97590	1.24360	2.82440	1.57870	HepG2	BUD13
RP11-529K1.3	ENSG00000260537.1	59.28240	3.28990	4.17140	12.47530	11.03260	HepG2	CALR
RP11-529K1.3	ENSG00000260537.1	35.65350	131.72880	-1.88550	6.38390	4.88160	HepG2	CCAR1
RP11-529K1.3	ENSG00000260537.1	104.96840	41.90630	1.32460	3.45150	2.72420	HepG2	CKAP4
RP11-529K1.3	ENSG00000260537.1	44.42360	16.85390	1.39810	2.34700	1.64640	HepG2	CNOT7
RP11-529K1.3	ENSG00000260537.1	0.00000	38.76680	-99999.99999	13.86820	12.30820	HepG2	DDX19B
RP11-529K1.3	ENSG00000260537.1	66.13710	11.76150	2.49130	5.92290	4.28760	HepG2	DDX1
RP11-529K1.3	ENSG00000260537.1	44.44260	9.34850	2.24900	4.36390	2.63640	HepG2	DDX28
RP11-529K1.3	ENSG00000260537.1	87.85870	12.35460	2.83000	8.44120	7.17100	HepG2	DDX55
RP11-529K1.3	ENSG00000260537.1	57.65300	11.41350	2.33650	3.30780	2.60620	HepG2	DNAJC2
RP11-529K1.3	ENSG00000260537.1	15.08480	115.63290	-2.93840	1.87280	1.35780	HepG2	ETF1
RP11-529K1.3	ENSG00000260537.1	0.00000	14.70530	-99999.99999	4.76630	2.19350	HepG2	FASTKD1
RP11-529K1.3	ENSG00000260537.1	9.99760	49.89030	-2.31910	2.93460	2.14160	HepG2	FIP1L1
RP11-529K1.3	ENSG00000260537.1	57.47860	10.57370	2.44240	4.99130	3.51740	HepG2	FUS
RP11-529K1.3	ENSG00000260537.1	4.50570	43.54430	-3.27260	3.40050	2.39440	HepG2	GEMIN5
RP11-529K1.3	ENSG00000260537.1	8.93620	0.00000	99999.99990	2.38310	1.44180	HepG2	GNB2L1
RP11-529K1.3	ENSG00000260537.1	78.25320	40.01800	0.96740	3.06690	2.04310	HepG2	HDGF
RP11-529K1.3	ENSG00000260537.1	0.00000	14.22180	-99999.99999	4.45920	2.68390	HepG2	HNRNPA0
RP11-529K1.3	ENSG00000260537.1	35.83100	12.69480	1.49690	2.34440	1.47630	HepG2	HNRNPA2B1
RP11-529K1.3	ENSG00000260537.1	54.84310	13.89090	1.98110	4.55810	2.74540	HepG2	HNRNPAB
RP11-529K1.3	ENSG00000260537.1	150.73280	34.53040	2.12600	2.58360	1.90740	HepG2	HNRNPK
RP11-529K1.3	ENSG00000260537.1	94.38550	12.55380	2.91030	2.62050	1.96410	HepG2	HNRNPL
RP11-529K1.3	ENSG00000260537.1	34.66420	125.05850	-1.85110	8.34810	7.31900	HepG2	HNRNPLL
RP11-529K1.3	ENSG00000260537.1	69.52510	12.86360	2.43410	3.08510	2.44760	HepG2	HNRNPU
RP11-529K1.3	ENSG00000260537.1	151.80790	32.42970	2.22680	4.60280	3.34370	HepG2	IGF2BP3
RP11-529K1.3	ENSG00000260537.1	46.86180	13.14100	1.83420	2.78840	2.05300	HepG2	ILF2
RP11-529K1.3	ENSG00000260537.1	42.22880	16.02930	1.39740	2.60620	1.46010	HepG2	KHDRBS1
RP11-529K1.3	ENSG00000260537.1	18.26850	0.00000	99999.99990	4.59470	2.49870	HepG2	CCAR2
RP11-529K1.3	ENSG00000260537.1	52.54560	0.00000	99999.99990	6.40870	4.71000	HepG2	LARP7
RP11-529K1.3	ENSG00000260537.1	34.37840	0.00000	99999.99990	5.31500	3.34250	HepG2	NIP7
RP11-529K1.3	ENSG00000260537.1	82.91520	11.35900	2.86770	2.46940	1.44140	HepG2	NONO
RP11-529K1.3	ENSG00000260537.1	100.33590	274.56030	-1.45230	4.46310	2.09160	HepG2	NUFIP2
RP11-529K1.3	ENSG00000260537.1	81.94000	0.00000	99999.99990	16.01300	12.49230	HepG2	NUSAP1
RP11-529K1.3	ENSG00000260537.1	43.46130	0.00000	99999.99990	4.34200	2.24970	HepG2	PHF6
RP11-529K1.3	ENSG00000260537.1	77.30360	11.47460	2.75200	8.51960	7.27380	HepG2	PPIL4
RP11-529K1.3	ENSG00000260537.1	30.06700	0.00000	99999.99990	5.27150	2.81180	HepG2	PSIP1
RP11-529K1.3	ENSG00000260537.1	88.33890	13.88530	2.66940	7.63440	6.75100	HepG2	PUM1
RP11-529K1.3	ENSG00000260537.1	54.75110	13.86760	1.98110	4.04080	3.23580	HepG2	PUM2
RP11-529K1.3	ENSG00000260537.1	150.23550	72.62390	1.04860	4.91180	3.80880	HepG2	RBM15
RP11-529K1.3	ENSG00000260537.1	102.14870	276.35640	-1.43590	4.20920	1.90550	HepG2	RBM17
RP11-529K1.3	ENSG00000260537.1	5.41070	96.63370	-4.15860	2.16760	1.69390	HepG2	RBM22
RP11-529K1.3	ENSG00000260537.1	51.64140	0.00000	99999.99990	4.12690	2.89730	HepG2	RBM27
RP11-529K1.3	ENSG00000260537.1	62.03330	242.89230	-1.96920	7.01110	4.29870	HepG2	RBM39
RP11-529K1.3	ENSG00000260537.1	99.63860	12.34950	3.01210	5.90960	2.08630	HepG2	RBM5
RP11-529K1.3	ENSG00000260537.1	51.31990	0.00000	99999.99990	9.96570	6.77560	HepG2	RPL23A
RP11-529K1.3	ENSG00000260537.1	51.42970	0.00000	99999.99990	13.50990	11.84070	HepG2	RPS2
RP11-529K1.3	ENSG00000260537.1	49.98690	16.89500	1.56490	3.25850	2.39270	HepG2	RPS3A
RP11-529K1.3	ENSG00000260537.1	66.58730	0.00000	99999.99990	16.14710	13.60760	HepG2	RPS5
RP11-529K1.3	ENSG00000260537.1	48.44720	11.45990	2.07970	2.23210	1.64250	HepG2	SAFB2
RP11-529K1.3	ENSG00000260537.1	88.45540	267.20760	-1.59490	5.13730	3.16130	HepG2	SF1
RP11-529K1.3	ENSG00000260537.1	13.04860	100.06480	-2.93900	13.96600	12.38600	HepG2	SF3A3
RP11-529K1.3	ENSG00000260537.1	29.37540	123.78250	-2.07510	6.62530	5.57200	HepG2	SF3B1
RP11-529K1.3	ENSG00000260537.1	117.16380	259.02620	-1.14460	2.77670	1.33010	HepG2	SFPQ
RP11-529K1.3	ENSG00000260537.1	60.58790	12.55580	2.27060	8.58250	7.45380	HepG2	SLBP
RP11-529K1.3	ENSG00000260537.1	51.93690	9.96300	2.38200	4.28270	3.07310	HepG2	SMNDC1
RP11-529K1.3	ENSG00000260537.1	73.34520	238.50160	-1.70120	5.25470	3.30270	HepG2	SNRNP200
RP11-529K1.3	ENSG00000260537.1	106.70250	12.91810	3.04600	7.46660	6.50590	HepG2	SRSF5
RP11-529K1.3	ENSG00000260537.1	63.99370	14.68690	2.12330	5.13450	3.58730	HepG2	STIP1
RP11-529K1.3	ENSG00000260537.1	96.21020	14.67910	2.71230	6.41460	5.53670	HepG2	SUCLG1
RP11-529K1.3	ENSG00000260537.1	66.52630	12.29440	2.43580	2.56090	1.90760	HepG2	SUPV3L1
RP11-529K1.3	ENSG00000260537.1	17.06820	121.89640	-2.83630	14.74240	13.28560	HepG2	TARDBP
RP11-529K1.3	ENSG00000260537.1	54.71440	8.23780	2.73150	6.80950	5.36640	HepG2	TFIP11
RP11-529K1.3	ENSG00000260537.1	50.12600	9.70700	2.36840	5.24300	3.26180	HepG2	TRA2A
RP11-529K1.3	ENSG00000260537.1	62.08930	12.60940	2.29980	4.78190	4.08160	HepG2	TRIM56
RP11-529K1.3	ENSG00000260537.1	20.78940	277.83590	-3.74030	17.24620	14.65180	HepG2	U2AF2
RP11-529K1.3	ENSG00000260537.1	171.76150	13.54830	3.66410	25.20290	22.75390	HepG2	UBE2L3
RP11-529K1.3	ENSG00000260537.1	96.78030	10.60910	3.18930	14.82520	12.58890	HepG2	XRCC6
RP11-529K1.3	ENSG00000260537.1	39.68570	12.10260	1.71320	2.18370	1.53350	HepG2	XRN2
RP11-529K1.3	ENSG00000260537.1	77.08210	38.50580	1.00120	2.49860	1.38320	K562	AARS
RP11-529K1.3	ENSG00000260537.1	40.31470	99.00700	-1.29620	4.57640	3.72870	K562	AKAP8L
RP11-529K1.3	ENSG00000260537.1	7.73670	33.27290	-2.10460	2.87130	2.27390	K562	AQR
RP11-529K1.3	ENSG00000260537.1	4.12870	29.50470	-2.83720	3.05710	1.94020	K562	CCAR1
RP11-529K1.3	ENSG00000260537.1	0.00000	15.17830	-99999.99999	3.80830	2.54250	K562	CSTF2
RP11-529K1.3	ENSG00000260537.1	39.52870	131.69270	-1.73620	8.42350	6.75870	K562	CELF1
RP11-529K1.3	ENSG00000260537.1	0.00000	111.63560	-99999.99999	33.67630	29.87740	K562	DDX19B
RP11-529K1.3	ENSG00000260537.1	0.00000	26.92590	-99999.99999	8.72280	7.01390	K562	EFTUD2
RP11-529K1.3	ENSG00000260537.1	50.69220	107.09530	-1.07910	4.01170	2.88340	K562	EIF4G2
RP11-529K1.3	ENSG00000260537.1	58.86120	14.98560	1.97360	4.97040	3.81200	K562	FIP1L1
RP11-529K1.3	ENSG00000260537.1	3.70090	41.83250	-3.49870	7.80520	6.85600	K562	FXR1
RP11-529K1.3	ENSG00000260537.1	6.08070	26.99520	-2.15040	2.99600	1.50800	K562	GEMIN5
RP11-529K1.3	ENSG00000260537.1	3.68830	32.80980	-3.15310	5.55890	2.75390	K562	HLTF
RP11-529K1.3	ENSG00000260537.1	8.79320	42.13330	-2.26050	4.30740	3.57910	K562	HNRNPC
RP11-529K1.3	ENSG00000260537.1	7.00600	37.62500	-2.42500	4.15480	2.72310	K562	HNRNPF
RP11-529K1.3	ENSG00000260537.1	0.00000	30.81690	-99999.99999	6.09070	3.88860	K562	ILF3
RP11-529K1.3	ENSG00000260537.1	73.28050	117.70490	-0.68370	2.22760	1.42610	K562	MBNL1
RP11-529K1.3	ENSG00000260537.1	20.26790	82.50280	-2.02520	5.86580	4.40950	K562	NAA15
RP11-529K1.3	ENSG00000260537.1	19.42680	55.40750	-1.51200	3.64630	2.80260	K562	NSUN2
RP11-529K1.3	ENSG00000260537.1	0.00000	28.24890	-99999.99999	9.45850	6.26910	K562	PA2G4
RP11-529K1.3	ENSG00000260537.1	19.98570	125.31730	-2.64850	2.16190	1.30840	K562	PABPN1
RP11-529K1.3	ENSG00000260537.1	0.42940	25.51270	-5.89260	7.01390	4.04580	K562	PES1
RP11-529K1.3	ENSG00000260537.1	72.81950	121.77500	-0.74180	2.37920	1.48790	K562	PUM2
RP11-529K1.3	ENSG00000260537.1	14.31040	98.18500	-2.77840	10.50640	9.49480	K562	PUS1
RP11-529K1.3	ENSG00000260537.1	2.94310	26.78880	-3.18620	4.25190	2.60100	K562	RRP9
RP11-529K1.3	ENSG00000260537.1	1.10370	22.00160	-4.31730	4.57190	3.17250	K562	SAFB
RP11-529K1.3	ENSG00000260537.1	22.96950	54.67460	-1.25120	2.64480	1.84680	K562	SF3A3
RP11-529K1.3	ENSG00000260537.1	0.00000	15.63560	-99999.99999	5.03840	3.86670	K562	SF3B4
RP11-529K1.3	ENSG00000260537.1	5.43430	25.36650	-2.22280	2.84850	1.81590	K562	SUPV3L1
RP11-529K1.3	ENSG00000260537.1	81.27720	23.41020	1.79560	4.92470	2.50160	K562	TRNAU1AP
RP11-529K1.3	ENSG00000260537.1	38.84670	99.55220	-1.35770	4.19580	2.49150	K562	UTP18
RP11-529K1.3	ENSG00000260537.1	29.72600	132.83760	-2.15990	3.70900	2.30760	K562	UTP3
RP11-529K1.3	ENSG00000260537.1	8.45300	39.44950	-2.22250	2.79260	1.49490	K562	WRN
RP11-529K1.3	ENSG00000260537.1	11.84900	37.46970	-1.66100	3.03930	2.13110	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-529K1.3 is not available on ENCORE database.

10 RBPs can affect the splicing of RP11-529K1.3 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RP11-529K1.3	ENSG00000260537.1	chr16	+	70346511	70346560			70333116	70333257	70348804	70348858	-0.14300	0.01073	0.09647	excluded	HepG2	U2AF2
SE	RP11-529K1.3	ENSG00000260537.1	chr16	+	70346511	70346560			70333116	70333257	70348804	70348858	0.09900	0.00043	0.03207	included	HepG2	AKAP1
SE	RP11-529K1.3	ENSG00000260537.1	chr16	+	70346511	70346560			70333116	70333257	70348804	70348858	-0.17300	0.00128	0.01507	excluded	K562	AQR
SE	RP11-529K1.3	ENSG00000260537.1	chr16	+	70351398	70351491			70349871	70350007	70358487	70358590	-0.10000	0.00006	0.00294	excluded	HepG2	SF3A3
SE	RP11-529K1.3	ENSG00000260537.1	chr16	+	70346511	70346560			70333116	70333257	70348804	70348858	-0.17800	0.00035	0.01322	excluded	HepG2	SF3A3
SE	RP11-529K1.3	ENSG00000260537.1	chr16	+	70351398	70351491			70349871	70350007	70358487	70358590	0.05300	0.00067	0.07118	included	HepG2	RBFOX2
SE	RP11-529K1.3	ENSG00000260537.1	chr16	+	70351398	70351491			70349871	70350007	70358487	70358590	-0.06800	0.00126	0.04048	excluded	K562	UTP18
SE	RP11-529K1.3	ENSG00000260537.1	chr16	+	70348804	70348858			70333116	70333257	70349871	70350007	-0.42600	0.00004	0.00215	excluded	K562	RBM15
SE	RP11-529K1.3	ENSG00000260537.1	chr16	+	70346511	70346560			70333116	70333257	70348804	70348858	-0.33300	0.00789	0.09811	excluded	K562	HNRNPC
MXE	RP11-529K1.3	ENSG00000260537.1	chr16	+	70346511	70346560	70348804	70348858	70333116	70333257	70349871	70350007	0.27000	0.00110	0.07922	1included	HepG2	UCHL5
MXE	RP11-529K1.3	ENSG00000260537.1	chr16	+	70346511	70346560	70348804	70348858	70333116	70333257	70349871	70350007	0.22700	0.00066	0.01875	1included	HepG2	DDX55

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-529K1.3

General Information

Functions

Localization

Domains (AlphaFold: RP11-529K1.3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-529K1.3 is not avaliable on ENCORE database.

15 proteins are bound to RP11-529K1.3 RNA:

eCLIP assay for RP11-529K1.3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-529K1.3 is not available on ENCORE database.

96 RBPs can affect the gene expression of RP11-529K1.3 :

The Knockdown/knockout RNA-Seq assay for RP11-529K1.3 is not available on ENCORE database.

10 RBPs can affect the splicing of RP11-529K1.3 :

The Knockdown/knockout RNA-Seq assay for RP11-529K1.3 is not avaliable on ENCORE database.