SLC25A26

General Information

Gene Name       : SLC25A26
Gene ID             : ENSG00000144741.17
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: SLC25A26)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC25A26ENSG00000144741.177.5716.3411.96ENCSR000AEF
HepG2SLC25A26ENSG00000144741.1710.3714.5212.45ENCSR985KAT
K562SLC25A26ENSG00000144741.175.965.215.58ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC25A26 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC25A26 RNA is bound by 9 proteins.  







eCLIP assay for SLC25A26 is not avaliable on ENCORE database.





9 proteins are bound to SLC25A26 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr36639677466396840+3'-UTR,CDS,intron-Proximal4.098113.35169HepG2U2AF2
chr36641326866413358+3'-UTR,CDS,intron-Distal,intron-Proximal4.598115.07478HepG2U2AF2
chr36629366366293745+5'-UTR,CDS,intron-Proximal3.354964.77136HepG2PPIG
chr36631247466312564+5'-UTR,CDS,intron-Proximal4.590124.97342HepG2PPIG
chr36628695066287008+CDS,intron-Distal,intron-Proximal4.181025.18845HepG2U2AF2
chr36635950166359585+intron-Distal3.507734.28254HepG2MATR3
chr36636041166360466+intron-Distal4.148703.07980HepG2HNRNPM
chr36636774666367809+intron-Distal3.214503.10640HepG2SUGP2
chr36634994466350029+intron-Distal5.5812511.15144HepG2QKI
chr36632911666329241+intron-Distal3.557073.59803HepG2PTBP1
chr36635951066359570+intron-Distal3.428794.02190K562EXOSC5
chr36639598966396067+intron-Distal4.331978.88160HepG2PTBP1
chr36639600866396190+intron-Distal4.344035.76537HepG2PCBP2
chr36636203766362106+intron-Distal3.213443.39827HepG2MATR3
chr36635913766359189+intron-Distal4.542215.12361K562EXOSC5
chr36636658066366651+intron-Distal3.674444.87826HepG2MATR3
chr36635951966359592+intron-Distal4.410483.34098HepG2HNRNPM
chr36639608666396160+intron-Distal4.433523.74583HepG2PTBP1
chr36639599966396106+intron-Distal5.325388.11407K562PTBP1
chr36635944266359563+intron-Distal4.918684.51059HepG2EXOSC5
chr36636100566361068+intron-Distal4.304824.48623K562EXOSC5
chr36639585666395939+intron-Distal3.248373.59395HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC25A26 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC25A26 is not available on ENCORE database.

  • 33 RBPs can affect the levels of SLC25A26.  








The Knockdown/knockout RNA-Seq assay for SLC25A26 is not available on ENCORE database.





33 RBPs can affect the gene expression of SLC25A26 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC25A26ENSG00000144741.13327.55800502.14440-0.616403.945403.20970HepG2DDX3X
SLC25A26ENSG00000144741.13167.10750266.73980-0.674702.735301.96540HepG2DDX55
SLC25A26ENSG00000144741.13233.25810414.66800-0.830005.849505.00520HepG2EIF2S1
SLC25A26ENSG00000144741.13176.89850446.19960-1.3348010.601209.29610HepG2EIF4B
SLC25A26ENSG00000144741.13407.59000515.38370-0.338502.310501.75250HepG2ETF1
SLC25A26ENSG00000144741.13334.40310462.40990-0.467602.453301.80050HepG2FXR1
SLC25A26ENSG00000144741.13326.60740434.40370-0.411502.038401.43280HepG2HNRNPK
SLC25A26ENSG00000144741.13268.51990435.96950-0.699204.642903.78830HepG2IGF2BP2
SLC25A26ENSG00000144741.13277.12030476.09630-0.780705.598004.71080HepG2NCBP2
SLC25A26ENSG00000144741.13217.33860339.59840-0.643902.622401.76260HepG2PABPC1
SLC25A26ENSG00000144741.13312.88480423.95120-0.438302.170301.52570HepG2PABPC4
SLC25A26ENSG00000144741.13165.45630273.69660-0.726103.199801.89730HepG2PRPF6
SLC25A26ENSG00000144741.13327.23120403.58170-0.302601.758101.30230HepG2PTBP1
SLC25A26ENSG00000144741.13560.47570430.771300.379602.688002.17490HepG2RBM22
SLC25A26ENSG00000144741.13328.64510449.16250-0.450703.127302.55890HepG2NELFE
SLC25A26ENSG00000144741.13191.49760128.096700.580002.291701.72680HepG2RPS19
SLC25A26ENSG00000144741.13250.81970373.01160-0.572602.720401.92800HepG2RPS3A
SLC25A26ENSG00000144741.13318.36300199.801100.672001.975801.40440HepG2SF3A3
SLC25A26ENSG00000144741.13305.86060420.21260-0.458203.129202.50570HepG2SF3B4
SLC25A26ENSG00000144741.13610.42690486.550700.327102.472301.98910HepG2SRFBP1
SLC25A26ENSG00000144741.13343.36080438.59790-0.353202.178901.74550HepG2SRSF1
SLC25A26ENSG00000144741.13241.63330353.41170-0.548503.625702.92690HepG2SRSF5
SLC25A26ENSG00000144741.13286.09460356.81150-0.318701.762801.30490HepG2SRSF9
SLC25A26ENSG00000144741.13238.83810171.073300.481302.286301.73040HepG2UTP3
SLC25A26ENSG00000144741.13164.14500100.291700.710702.949002.36550K562AGGF1
SLC25A26ENSG00000144741.13281.24890182.957600.620202.903402.13030K562GRSF1
SLC25A26ENSG00000144741.13232.54830152.858500.605203.210602.30040K562MAGOH
SLC25A26ENSG00000144741.1366.63500129.95840-0.963702.658501.45180K562PABPC1
SLC25A26ENSG00000144741.13177.99880103.502300.782103.195302.61900K562PUS1
SLC25A26ENSG00000144741.1342.8698086.22950-1.008202.750301.81710K562TIAL1
SLC25A26ENSG00000144741.1371.63390130.24810-0.862502.923901.87210K562UCHL5
SLC25A26ENSG00000144741.1374.87100119.70790-0.677002.063601.43720K562UPF1
SLC25A26ENSG00000144741.1375.93570132.59790-0.804202.769601.56300K562XRN2
SLC25A26ENSG00000144741.13183.24660253.12440-0.466102.105801.36310K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC25A26 is not available on ENCORE database.





4 RBPs can affect the splicing of SLC25A26 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESLC25A26ENSG00000144741.13chr3+6635487666354961663137556631380366396787663968320.082000.001680.08419includedHepG2AKAP1
SESLC25A26ENSG00000144741.13chr3+662869676628712466271167662715536629362666293736-0.225000.000620.05266excludedHepG2DDX6
A3SSSLC25A26ENSG00000144741.13chr3+6631369666313803663137556631380366312474663125790.061000.002990.01835longerK562AQR
MXESLC25A26ENSG00000144741.13chr3+66396787663968326641328366413353663137556631380366419901664199660.302000.003800.089791includedHepG2SF3A3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SLC25A26 is not avaliable on ENCORE database.