APOA5

General Information

Gene Name       : APOA5
Gene ID             : ENSG00000110243.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: APOA5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878APOA5ENSG00000110243.110.000.000.00ENCSR000AEF
HepG2APOA5ENSG00000110243.1133.2610.0221.64ENCSR985KAT
K562APOA5ENSG00000110243.110.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for APOA5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • APOA5 RNA is bound by 9 proteins.  







eCLIP assay for APOA5 is not avaliable on ENCORE database.





9 proteins are bound to APOA5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11116660536116660630-3'-UTR,intron-Distal4.413559.26660HepG2AKAP1
chr11116660117116660232-3'-UTR,intron-Distal4.6816116.18572HepG2AKAP1
chr11116660645116660692-3'-UTR,intron-Distal4.156036.31568HepG2LARP4
chr11116660155116660233-3'-UTR,intron-Distal5.4576510.73398HepG2UPF1
chr11116660539116660602-3'-UTR,intron-Distal5.084928.76192HepG2LIN28B
chr11116660483116660533-3'-UTR,intron-Distal4.398739.32514HepG2UPF1
chr11116660470116660534-3'-UTR,intron-Distal3.616984.22136HepG2RBM15
chr11116660232116660346-3'-UTR,intron-Distal5.2925219.95379HepG2AKAP1
chr11116660479116660536-3'-UTR,intron-Distal5.213288.06720HepG2AKAP1
chr11116660686116660751-3'-UTR,intron-Distal3.072344.18590HepG2RBM15
chr11116660730116660792-3'-UTR,intron-Distal5.145259.45100HepG2AKAP1
chr11116660664116660781-3'-UTR,intron-Distal5.0993715.85441HepG2UPF1
chr11116660259116660335-3'-UTR,intron-Distal5.6084410.94465HepG2UPF1
chr11116660380116660479-3'-UTR,intron-Distal4.9548515.31364HepG2AKAP1
chr11116660646116660716-3'-UTR,intron-Distal4.359679.52232HepG2AKAP1
chr11116660382116660483-3'-UTR,intron-Distal6.3761420.84685HepG2UPF1
chr11116660480116660537-3'-UTR,intron-Distal4.562025.32461HepG2LIN28B
chr11116660770116660833-3'-UTR,intron-Distal4.6102213.74568HepG2LARP4
chr11116660986116661043-CDS,intron-Distal6.2018417.38849HepG2SND1
chr11116662323116662368-CDS,intron-Distal5.498846.24443HepG2RPS3
chr11116660896116660937-CDS,intron-Distal5.4719510.32792HepG2SND1
chr11116661623116661676-CDS,intron-Distal4.4575112.69591HepG2SND1
chr11116661390116661480-CDS,intron-Distal,intron-Proximal4.9324316.81720HepG2SND1
chr11116661220116661266-CDS,intron-Distal3.924038.91885HepG2SND1
chr11116661296116661369-CDS,intron-Distal,intron-Proximal5.0581120.93432HepG2SND1
chr11116661676116661720-CDS,intron-Distal3.607117.31650HepG2SND1
chr11116661486116661546-CDS,intron-Distal4.4937110.65228HepG2SND1
chr11116661077116661177-CDS,intron-Distal4.0672211.28448HepG2SND1
chr11116661479116661560-CDS,intron-Distal3.157173.54196HepG2SRSF9
chr11116661663116661725-CDS,intron-Distal5.211977.15341HepG2RPS3
chr11116661546116661623-CDS,intron-Distal4.1654514.57985HepG2SND1
chr11116662977116663046-intron-Distal4.432635.98353HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for APOA5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for APOA5 is not available on ENCORE database.

  • 138 RBPs can affect the levels of APOA5.  








The Knockdown/knockout RNA-Seq assay for APOA5 is not available on ENCORE database.





138 RBPs can affect the gene expression of APOA5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
APOA5ENSG00000110243.7205.41860727.39430-1.824206.505204.93110HepG2AATF
APOA5ENSG00000110243.71306.19320890.810200.552102.395901.51850HepG2ABCF1
APOA5ENSG00000110243.7186.96030951.70320-2.3478045.5697043.85080HepG2ACO1
APOA5ENSG00000110243.7733.24440351.357301.0613012.8583010.93920HepG2ADAR
APOA5ENSG00000110243.768.018102538.58930-5.22200202.54830199.43800HepG2AKAP1
APOA5ENSG00000110243.7692.75480956.02150-0.464704.421003.46690HepG2AKAP8L
APOA5ENSG00000110243.7758.44720956.01100-0.334003.033902.32000HepG2AUH
APOA5ENSG00000110243.7685.12100438.339900.644203.797002.75840HepG2BCLAF1
APOA5ENSG00000110243.72965.717101995.543400.571506.624805.46360HepG2CIRBP
APOA5ENSG00000110243.7101.80780202.98510-0.995504.119103.17920HepG2CNOT7
APOA5ENSG00000110243.7596.88840337.686700.821703.864303.06340HepG2CPSF6
APOA5ENSG00000110243.7375.78840745.42250-0.988102.723001.38160HepG2CSTF2T
APOA5ENSG00000110243.7467.88540743.82810-0.668808.508507.49910HepG2CELF1
APOA5ENSG00000110243.71050.45930799.732500.393305.661304.65400HepG2DAZAP1
APOA5ENSG00000110243.7454.74530800.99700-0.816702.666101.99900HepG2DDX21
APOA5ENSG00000110243.7911.195202431.61480-1.4161030.2184028.39940HepG2DDX3X
APOA5ENSG00000110243.7307.57170511.04180-0.732506.939904.94170HepG2DDX52
APOA5ENSG00000110243.7281.76970496.14730-0.816304.068403.15010HepG2DDX55
APOA5ENSG00000110243.71938.16150646.054801.5849025.1978022.71360HepG2DDX5
APOA5ENSG00000110243.7746.119002089.18820-1.4855027.5683025.92660HepG2DDX6
APOA5ENSG00000110243.7478.57750341.232100.487903.228102.17210HepG2DHX30
APOA5ENSG00000110243.73056.06620910.474501.7469069.8634067.70450HepG2DKC1
APOA5ENSG00000110243.7645.62960353.782200.8677012.2706010.87580HepG2DNAJC21
APOA5ENSG00000110243.7271.78700350.69850-0.367802.239101.64010HepG2DNAJC2
APOA5ENSG00000110243.71132.61560609.653700.8935010.843109.17530HepG2EEF2
APOA5ENSG00000110243.7284.04540508.15940-0.839207.424805.60860HepG2EFTUD2
APOA5ENSG00000110243.7370.18520738.67780-0.996703.133701.94820HepG2AGO1
APOA5ENSG00000110243.71111.542302008.00940-0.8532011.6787010.51220HepG2EIF2S1
APOA5ENSG00000110243.7388.66310675.34890-0.797103.540402.21510HepG2EIF2S2
APOA5ENSG00000110243.7146.97300494.85580-1.7515022.0754019.80210HepG2EIF3D
APOA5ENSG00000110243.71149.23480757.263700.601703.052201.92380HepG2EIF3G
APOA5ENSG00000110243.71299.671102218.90350-0.771709.009507.86120HepG2EIF4A3
APOA5ENSG00000110243.7252.694702160.76300-3.0961077.4243074.34530HepG2EIF4B
APOA5ENSG00000110243.7631.85160789.04150-0.320502.578701.76570HepG2EIF4G1
APOA5ENSG00000110243.7979.60600755.841100.374002.751001.93840HepG2EIF4G2
APOA5ENSG00000110243.7930.711801097.57210-0.237902.029601.49710HepG2ETF1
APOA5ENSG00000110243.7424.79070929.82070-1.130205.924604.70270HepG2EWSR1
APOA5ENSG00000110243.7161.52840899.39180-2.4772011.4981010.08110HepG2FIP1L1
APOA5ENSG00000110243.7741.00360412.909500.843606.524604.66830HepG2FKBP4
APOA5ENSG00000110243.7987.13050338.326801.544706.408004.86590HepG2FTO
APOA5ENSG00000110243.7982.261101650.46950-0.7487011.6431010.07940HepG2FUBP3
APOA5ENSG00000110243.7507.83030772.46610-0.605103.645902.36720HepG2FUS
APOA5ENSG00000110243.7707.344802239.33390-1.6626040.6525038.40070HepG2FXR1
APOA5ENSG00000110243.7964.209002077.01950-1.1071017.8846016.26880HepG2G3BP1
APOA5ENSG00000110243.71646.53780382.713602.1050049.8281047.52550HepG2GPKOW
APOA5ENSG00000110243.7421.08350728.38670-0.790604.856402.85700HepG2GTF2F1
APOA5ENSG00000110243.7632.61110908.49250-0.522204.525703.30180HepG2HDGF
APOA5ENSG00000110243.7451.39330741.38650-0.715803.665602.04940HepG2HLTF
APOA5ENSG00000110243.7580.37780357.172000.700302.570201.94480HepG2HNRNPA1
APOA5ENSG00000110243.7594.71810735.00860-0.305602.327201.46160HepG2HNRNPA2B1
APOA5ENSG00000110243.7612.49270272.548501.1681020.7772019.06570HepG2HNRNPF
APOA5ENSG00000110243.7780.250502103.84990-1.4310034.5968032.42130HepG2HNRNPK
APOA5ENSG00000110243.7469.77150728.47530-0.632908.763607.62960HepG2HNRNPL
APOA5ENSG00000110243.71517.78120365.237902.0550048.2923046.17230HepG2HNRNPLL
APOA5ENSG00000110243.7342.51560620.22930-0.856604.019102.89270HepG2HNRNPM
APOA5ENSG00000110243.7575.09060394.673500.543005.757304.90800HepG2HNRNPU
APOA5ENSG00000110243.7321.82600497.31620-0.627903.654802.23920HepG2HSPD1
APOA5ENSG00000110243.71056.29220268.383101.9765058.1592055.62030HepG2IGF2BP1
APOA5ENSG00000110243.7915.012702111.14140-1.2062022.9469021.22900HepG2IGF2BP2
APOA5ENSG00000110243.7356.650001981.63210-2.4741022.1341019.63800HepG2IGF2BP3
APOA5ENSG00000110243.7317.58550403.14360-0.344102.388401.70010HepG2ILF2
APOA5ENSG00000110243.7329.74850197.887600.736603.632902.09020HepG2ILF3
APOA5ENSG00000110243.71373.255802123.64120-0.628905.426903.97770HepG2KHSRP
APOA5ENSG00000110243.71771.72770869.861601.0262040.5582037.53090HepG2KIF1C
APOA5ENSG00000110243.7336.67790512.49590-0.606202.747401.61630HepG2LARP7
APOA5ENSG00000110243.7321.10740513.90750-0.678503.212401.37270HepG2LSM11
APOA5ENSG00000110243.71625.193002240.11820-0.463004.055903.26350HepG2MAGOH
APOA5ENSG00000110243.71502.014602252.56590-0.584705.506804.64090HepG2MATR3
APOA5ENSG00000110243.789.08590517.87780-2.5393024.2464021.40180HepG2METAP2
APOA5ENSG00000110243.7260.18480727.41280-1.483207.772306.48060HepG2MSI2
APOA5ENSG00000110243.7862.77360372.671501.211005.668204.25600HepG2MTPAP
APOA5ENSG00000110243.7747.917402305.55330-1.6242036.4762034.38700HepG2NCBP2
APOA5ENSG00000110243.7836.36410463.353500.851904.359902.57170HepG2NIP7
APOA5ENSG00000110243.7801.85180544.804700.557503.011001.49550HepG2NOLC1
APOA5ENSG00000110243.7729.92800455.837300.679102.678301.60330HepG2NONO
APOA5ENSG00000110243.71987.07060323.911802.6169037.5212035.29270HepG2NSUN2
APOA5ENSG00000110243.71112.36780433.785001.358504.970702.40040HepG2NUFIP2
APOA5ENSG00000110243.777.84830185.52780-1.252904.569903.40930HepG2PABPC1
APOA5ENSG00000110243.71523.483502052.90940-0.430303.492802.68750HepG2PABPC4
APOA5ENSG00000110243.7220.19460390.64240-0.827108.088906.76160HepG2PARN
APOA5ENSG00000110243.7654.973602182.04990-1.7362073.2612070.91190HepG2PCBP1
APOA5ENSG00000110243.787.48810182.03240-1.057004.631102.68860HepG2PNPT1
APOA5ENSG00000110243.7719.34170483.075500.574303.757701.68000HepG2PPIG
APOA5ENSG00000110243.7497.46440352.014900.498903.539102.71580HepG2PPIL4
APOA5ENSG00000110243.71444.37670464.607501.6363026.5782024.65320HepG2PRPF4
APOA5ENSG00000110243.7242.44360382.47620-0.657702.642501.85250HepG2PRPF8
APOA5ENSG00000110243.7592.408602220.22800-1.9060075.8153073.87780HepG2PTBP1
APOA5ENSG00000110243.72691.66890757.021801.8300068.1792065.75140HepG2PUF60
APOA5ENSG00000110243.7348.80130803.63330-1.2041029.2865027.77050HepG2PUM1
APOA5ENSG00000110243.71301.146602404.75210-0.8861023.2747021.71960HepG2QKI
APOA5ENSG00000110243.7125.56510705.35330-2.4899022.9957021.15770HepG2RAVER1
APOA5ENSG00000110243.7379.260401067.93070-1.4936036.7512034.32580HepG2RBM15
APOA5ENSG00000110243.7146.93530917.37900-2.6423080.6000078.57670HepG2RBM22
APOA5ENSG00000110243.7748.224702182.39520-1.5444049.8032047.26920HepG2RBM25
APOA5ENSG00000110243.7117.91890196.04850-0.733402.885401.31350HepG2RBM47
APOA5ENSG00000110243.71010.83550501.864701.0101011.146009.07020HepG2RCC2
APOA5ENSG00000110243.71331.553902470.97480-0.8920020.1181018.91730HepG2NELFE
APOA5ENSG00000110243.71318.406702301.24260-0.8036010.207509.13890HepG2RECQL
APOA5ENSG00000110243.7456.74600293.591200.637504.744603.88220HepG2RPLP0
APOA5ENSG00000110243.7205.02980481.56440-1.2319015.3510014.06560HepG2RPS19
APOA5ENSG00000110243.7557.58550203.826001.4518014.8738013.08340HepG2RPS3A
APOA5ENSG00000110243.7127.70750378.32250-1.5668010.147508.78050HepG2RRP9
APOA5ENSG00000110243.7489.61320767.97580-0.649403.312001.63660HepG2RTF1
APOA5ENSG00000110243.7355.88580191.937700.890705.607203.74170HepG2SART3
APOA5ENSG00000110243.7342.64020193.627800.823304.168502.28510HepG2SBDS
APOA5ENSG00000110243.7294.20620483.24900-0.715905.629604.30120HepG2SERBP1
APOA5ENSG00000110243.71317.73740421.536101.644207.208304.85900HepG2SF1
APOA5ENSG00000110243.7489.473101333.58070-1.4460020.2260018.35490HepG2SF3A3
APOA5ENSG00000110243.7444.203102311.70410-2.37970104.88040102.27180HepG2SF3B4
APOA5ENSG00000110243.71743.43660725.909401.2640039.1959037.20950HepG2SLBP
APOA5ENSG00000110243.7306.89930409.85580-0.417403.003002.33640HepG2SMN1
APOA5ENSG00000110243.7114.228401036.16660-3.18130104.65100102.69470HepG2SRFBP1
APOA5ENSG00000110243.7905.616302412.85320-1.4138056.3156054.79230HepG2SRSF1
APOA5ENSG00000110243.7728.21720267.767501.4433017.6948016.20610HepG2SRSF7
APOA5ENSG00000110243.7816.456501962.92830-1.2656049.5026047.74240HepG2SRSF9
APOA5ENSG00000110243.72655.42770899.674301.5614090.7548088.89870HepG2SSB
APOA5ENSG00000110243.7282.20310495.61030-0.812506.258804.43290HepG2SSRP1
APOA5ENSG00000110243.7424.83930659.23580-0.633903.234001.92880HepG2SUB1
APOA5ENSG00000110243.7554.78520850.06230-0.615605.059804.26170HepG2SUCLG1
APOA5ENSG00000110243.7327.96000501.66780-0.613203.487601.98240HepG2SUGP2
APOA5ENSG00000110243.7971.25110493.831200.975708.428507.35380HepG2SUPV3L1
APOA5ENSG00000110243.71053.584802168.58510-1.0414027.4040025.87700HepG2TAF15
APOA5ENSG00000110243.71574.67560486.797701.693604.546803.20230HepG2TBRG4
APOA5ENSG00000110243.7657.786301992.82680-1.5991054.4378051.07320HepG2TIA1
APOA5ENSG00000110243.7548.50870383.448900.516404.176203.58940HepG2TIAL1
APOA5ENSG00000110243.7414.57390708.63860-0.773403.817602.10200HepG2TRA2A
APOA5ENSG00000110243.7308.52390386.93050-0.326701.872001.39040HepG2TRIM56
APOA5ENSG00000110243.71309.61280739.612800.824204.149803.05440HepG2TUFM
APOA5ENSG00000110243.7302.76440769.08870-1.345006.279405.34920HepG2U2AF1
APOA5ENSG00000110243.7519.87650782.89130-0.590603.315702.40030HepG2UBE2L3
APOA5ENSG00000110243.782.77480291.66950-1.8171010.294708.83270HepG2UCHL5
APOA5ENSG00000110243.7871.475901215.62490-0.480206.687605.12960HepG2UTP18
APOA5ENSG00000110243.7365.602401141.83260-1.6430054.2934052.16510HepG2UTP3
APOA5ENSG00000110243.7345.38580182.567300.919703.241002.04430HepG2XPO5
APOA5ENSG00000110243.7242.00170694.03250-1.5200011.531408.99590HepG2XRCC5
APOA5ENSG00000110243.7403.13940775.93870-0.944707.239105.59350HepG2XRCC6
APOA5ENSG00000110243.72060.72010486.125002.0836052.7881050.04120HepG2XRN2
APOA5ENSG00000110243.71749.949001300.723700.427908.841008.00500HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for APOA5 is not available on ENCORE database.





2 RBPs can affect the splicing of APOA5 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEAPOA5ENSG00000110243.7chr11-116662301116662396116661458116661783116662527116662584-0.052000.000260.02534excludedHepG2IGF2BP3
MXEAPOA5ENSG00000110243.7chr11-1166623011166624131166625271166626081166600881166617831166630951166631360.065000.000770.018831includedHepG2SRSF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for APOA5 is not avaliable on ENCORE database.