ZC3H7B

General Information

Gene Name       : ZC3H7B
Gene ID             : ENSG00000100403.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZC3H7B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZC3H7BENSG00000100403.117.2816.7912.04ENCSR000AEF
HepG2ZC3H7BENSG00000100403.1145.1321.2133.17ENCSR985KAT
K562ZC3H7BENSG00000100403.1128.8820.5924.73ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZC3H7B is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZC3H7B RNA is bound by 25 proteins.  







eCLIP assay for ZC3H7B is not avaliable on ENCORE database.





25 proteins are bound to ZC3H7B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr224175464241754761+3'-UTR5.207659.17081HepG2AKAP1
chr224175389741753992+3'-UTR5.1776215.68171HepG2UPF1
chr224175451341754584+3'-UTR3.085953.30948HepG2PRPF4
chr224175540541755480+3'-UTR3.808643.35727HepG2FUS
chr224175424341754361+3'-UTR5.2897420.74309K562UPF1
chr224175374141753857+3'-UTR3.993019.15195K562AKAP1
chr224175514941755181+3'-UTR5.7640711.61633K562UPF1
chr224175519541755258+3'-UTR3.617384.93452K562NOLC1
chr224175572741755784+3'-UTR5.1918813.35513K562UPF1
chr224175402541754100+3'-UTR5.1127321.03004K562UPF1
chr224175413141754188+3'-UTR4.7131715.85891K562UPF1
chr224175355841753614+3'-UTR3.981315.37876HepG2AKAP1
chr224175476441754809+3'-UTR3.789725.87389HepG2UPF1
chr224175374441753793+3'-UTR3.542674.17219K562METAP2
chr224175520241755275+3'-UTR5.2384323.91241K562UPF1
chr224175578441755835+3'-UTR4.6391913.57997K562UPF1
chr224175428041754347+3'-UTR4.7159513.07630HepG2UPF1
chr224175355141753640+3'-UTR5.3913320.43494HepG2UPF1
chr224175465941754708+3'-UTR4.900926.71037HepG2UPF1
chr224175563241755713+3'-UTR5.9230327.60901K562UPF1
chr224175566441755712+3'-UTR3.413925.44944HepG2UPF1
chr224175386841753967+3'-UTR3.491983.07411K562LIN28B
chr224175572541755837+3'-UTR4.748578.16666K562FAM120A
chr224175391241753981+3'-UTR3.753805.56003HepG2AKAP1
chr224175348141753551+3'-UTR5.2457919.38671HepG2UPF1
chr224175592441756002+3'-UTR4.636366.90365K562DDX6
chr224175543941755545+3'-UTR5.8763013.02941HepG2UPF1
chr224175389041753976+3'-UTR4.9829025.98943K562UPF1
chr224175379541753882+3'-UTR6.1348820.04501HepG2UPF1
chr224175564141755691+3'-UTR3.063613.07714K562YBX3
chr224175544941755534+3'-UTR3.558834.00333HepG2EIF3H
chr224175592241756016+3'-UTR6.2121054.12494K562UPF1
chr224175393541753976+3'-UTR4.129443.33639K562METAP2
chr224175539641755534+3'-UTR5.3401432.24233K562UPF1
chr224175390341753946+3'-UTR3.698804.93550K562FAM120A
chr224175363641753709+3'-UTR3.868455.90082HepG2AKAP1
chr224175371841753783+3'-UTR4.046287.15385HepG2AKAP1
chr224175506841755103+3'-UTR4.943635.00858K562AKAP1
chr224175452541754582+3'-UTR6.4502819.54617K562UPF1
chr224175452241754581+3'-UTR3.454725.40194HepG2FAM120A
chr224175373341753795+3'-UTR4.3109414.13313HepG2UPF1
chr224175592341755991+3'-UTR3.541727.68147K562FAM120A
chr224175522641755276+3'-UTR3.289293.77005HepG2AKAP1
chr224175580341755848+3'-UTR4.261494.20997HepG2UPF1
chr224175364041753712+3'-UTR4.6015417.11020HepG2UPF1
chr224175465941754715+3'-UTR3.955586.66441K562AKAP1
chr224175348341753562+3'-UTR3.651543.92090HepG2GRSF1
chr224175475041754815+3'-UTR3.537869.95554K562UPF1
chr224175513441755251+3'-UTR4.068759.58263K562LIN28B
chr224169753841697674+5'-UTR4.754505.88953K562DDX3X
chr224169771441697775+5'-UTR3.136013.63563HepG2UPF1
chr224169772541697777+5'-UTR,intron-Proximal3.544545.00681HepG2NOL12
chr224169772141697775+5'-UTR3.627129.69901K562UPF1
chr224172153941721620+CDS,intron-Proximal4.546524.92499HepG2AQR
chr224173426041734354+CDS,intron-Proximal5.069206.47067K562SF3B4
chr224174408241744153+CDS3.905715.03780K562METAP2
chr224172336741723411+CDS,intron-Proximal4.672064.86944K562AQR
chr224172321141723263+CDS3.327744.77136HepG2PPIG
chr224175239941752460+CDS4.219733.33639K562METAP2
chr224175238941752429+CDS3.775436.55257K562UPF1
chr224173855541738618+CDS3.717536.36816K562YBX3
chr224173861841738634+CDS,intron-Proximal4.512416.30966K562YBX3
chr224175185841751949+CDS,intron-Proximal3.178226.66908HepG2PRPF8
chr224173941541739434+CDS,intron-Proximal4.175084.55095K562YBX3
chr224173587641735924+CDS4.2251012.02505K562AQR
chr224173586941735922+CDS3.326243.22327HepG2AQR
chr224172172141721820+CDS,intron-Proximal5.242789.44026K562LIN28B
chr224173956341739628+CDS,intron-Proximal5.512856.83960K562AQR
chr224173424541734330+CDS,intron-Proximal3.948276.24165HepG2SF3B4
chr224175235641752426+CDS4.173814.72880HepG2GRWD1
chr224173943441739566+CDS3.5371410.67597K562YBX3
chr224172173041721890+CDS3.046536.87969HepG2GRWD1
chr224175206541752137+CDS,intron-Proximal4.4716215.98255K562AQR
chr224173955541739640+CDS,intron-Proximal5.8925110.77812HepG2PRPF8
chr224173613041736194+CDS,intron-Proximal3.494287.83009HepG2PRPF8
chr224175206541752113+CDS,intron-Proximal6.3009519.42973HepG2PRPF8
chr224173519041735246+CDS,intron-Proximal3.238807.92471HepG2PRPF8
chr224173862741738679+CDS,intron-Proximal4.038677.30031K562AQR
chr224174756641747646+CDS4.778326.59793K562UCHL5
chr224175179041751840+CDS3.854963.86355HepG2PPIG
chr224171666641716720+CDS,intron-Proximal3.439283.12941K562UCHL5
chr224173941841739501+CDS,intron-Proximal4.905715.98192K562METAP2
chr224173855841738633+CDS,intron-Proximal4.180497.56145K562METAP2
chr224174417041744181+CDS,intron-Proximal3.895794.00320K562AQR
chr224173497141735023+CDS,intron-Proximal3.467665.75231K562AQR
chr224175206541752107+CDS,intron-Proximal4.406474.28193HepG2AQR
chr224173938841739445+CDS,intron-Proximal3.649865.35619K562AQR
chr224175153741751581+CDS5.168737.35154K562UPF1
chr224173519241735309+CDS,intron-Distal,intron-Proximal6.7624722.27579K562AQR
chr224175232841752350+CDS,intron-Proximal5.049854.65563K562AQR
chr224175175941751790+CDS,intron-Proximal3.264974.24993HepG2PPIG
chr224174415541744201+CDS,intron-Proximal4.398694.38106HepG2PPIG
chr224173587141735935+CDS3.328033.73678HepG2UPF1
chr224175177641751842+CDS3.149363.63043HepG2GRWD1
chr224174759141747648+CDS3.268754.51003HepG2PPIG
chr224174214841742211+CDS3.849043.66655K562YBX3
chr224174045741740548+intron-Distal4.111623.83943K562HNRNPK
chr224169837341698567+intron-Distal4.265339.42344HepG2CSTF2T
chr224169840041698518+intron-Distal3.621935.16186K562NONO
chr224174040741740496+intron-Distal3.434554.09699HepG2HNRNPK
chr224174543241745488+intron-Distal5.356636.82887HepG2EFTUD2
chr224169783141697892+intron-Distal,intron-Proximal4.104623.44758HepG2CSTF2T
chr224173864241738696+intron-Proximal4.910297.02967HepG2PRPF8
chr224173614141736206+intron-Proximal5.4383115.88168K562AQR
chr224173436241734452+intron-Proximal3.692388.72467K562AQR
chr224171672541716797+intron-Proximal3.966866.08669HepG2RBFOX2
chr224174418141744215+intron-Proximal5.153075.69951K562AQR
chr224175249641752593+intron-Proximal5.368029.44415HepG2RBFOX2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZC3H7B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZC3H7B is not available on ENCORE database.

  • 77 RBPs can affect the levels of ZC3H7B.  








The Knockdown/knockout RNA-Seq assay for ZC3H7B is not available on ENCORE database.





77 RBPs can affect the gene expression of ZC3H7B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZC3H7BENSG00000100403.101404.201401995.49430-0.507003.912401.88940HepG2AARS
ZC3H7BENSG00000100403.101293.090001785.60780-0.465602.803801.72620HepG2AATF
ZC3H7BENSG00000100403.103295.742604049.13280-0.297001.869901.42280HepG2AKAP1
ZC3H7BENSG00000100403.102633.098203350.13410-0.347502.776901.99160HepG2ASCC1
ZC3H7BENSG00000100403.102549.834503308.07340-0.375603.342002.69130HepG2BOP1
ZC3H7BENSG00000100403.101877.331602305.40340-0.296302.808902.03150HepG2CALR
ZC3H7BENSG00000100403.101274.679101869.22260-0.552303.227502.39610HepG2CNOT7
ZC3H7BENSG00000100403.101012.277901257.28340-0.312702.521001.49020HepG2CSTF2
ZC3H7BENSG00000100403.10805.786401829.10070-1.1827010.268707.30280HepG2CSTF2T
ZC3H7BENSG00000100403.103135.004902434.284500.364906.441705.53880HepG2CELF1
ZC3H7BENSG00000100403.101583.835901968.07990-0.313402.547601.89350HepG2DDX21
ZC3H7BENSG00000100403.102402.611303448.65220-0.521402.700001.73550HepG2DDX59
ZC3H7BENSG00000100403.102413.331601662.398300.5377015.4871014.06880HepG2DNAJC2
ZC3H7BENSG00000100403.103113.905102473.566300.332003.067702.21180HepG2EIF4G2
ZC3H7BENSG00000100403.102336.055301619.188600.528703.763601.98570HepG2HNRNPD
ZC3H7BENSG00000100403.103612.027602982.105200.276404.252103.38460HepG2HNRNPF
ZC3H7BENSG00000100403.102496.168301870.944000.415808.196507.19350HepG2HNRNPU
ZC3H7BENSG00000100403.103563.002902936.525900.278903.040902.28470HepG2IGF2BP1
ZC3H7BENSG00000100403.105553.205404016.766700.467203.559902.61720HepG2LARP4
ZC3H7BENSG00000100403.102852.601303486.38180-0.289503.020802.17580HepG2MSI2
ZC3H7BENSG00000100403.102840.052603677.47470-0.372802.918302.26950HepG2NCBP2
ZC3H7BENSG00000100403.103267.846102595.149400.332404.269303.32240HepG2NOL12
ZC3H7BENSG00000100403.103012.415301838.828300.712003.768402.47650HepG2NONO
ZC3H7BENSG00000100403.101953.372101592.813300.294302.911401.64840HepG2PKM
ZC3H7BENSG00000100403.102239.825301668.728100.424506.626605.52360HepG2PPIL4
ZC3H7BENSG00000100403.102182.536103012.49850-0.4650010.055308.71610HepG2PRPF4
ZC3H7BENSG00000100403.103091.616602477.389400.319403.381502.73180HepG2PUF60
ZC3H7BENSG00000100403.103735.528502629.966100.5062018.7021017.43910HepG2PUM1
ZC3H7BENSG00000100403.103051.077402627.978000.215302.166801.57050HepG2PUM2
ZC3H7BENSG00000100403.102137.174804212.92890-0.9791036.7130035.24830HepG2RBM22
ZC3H7BENSG00000100403.102736.899203434.20010-0.327403.406802.66520HepG2RBM25
ZC3H7BENSG00000100403.103121.352303888.44660-0.317005.243204.53680HepG2NELFE
ZC3H7BENSG00000100403.102326.528401874.278900.311702.873802.24880HepG2RPS19
ZC3H7BENSG00000100403.102417.826601666.143500.5371014.1696012.88050HepG2SAFB2
ZC3H7BENSG00000100403.103039.631302375.651700.355508.539507.41250HepG2SLBP
ZC3H7BENSG00000100403.102339.498001942.980000.267804.574403.78270HepG2SMN1
ZC3H7BENSG00000100403.101525.071303617.84160-1.2463011.9651010.35160HepG2SNRNP70
ZC3H7BENSG00000100403.103770.542004758.27320-0.335707.734007.01280HepG2SRFBP1
ZC3H7BENSG00000100403.102481.839403796.88100-0.6134019.4326018.41890HepG2SRSF1
ZC3H7BENSG00000100403.103005.114702446.190500.296805.036504.23180HepG2SRSF5
ZC3H7BENSG00000100403.103505.633602929.807400.258803.851403.05040HepG2SRSF7
ZC3H7BENSG00000100403.102063.630903089.07330-0.5820011.8419010.84120HepG2SRSF9
ZC3H7BENSG00000100403.103756.587602781.881800.4333011.2795010.16770HepG2SUCLG1
ZC3H7BENSG00000100403.102012.146602908.76030-0.531708.356506.78570HepG2SUPT6H
ZC3H7BENSG00000100403.101515.986101992.66820-0.394403.433902.69010HepG2SUPV3L1
ZC3H7BENSG00000100403.102452.838703413.13410-0.476605.569204.82180HepG2TAF15
ZC3H7BENSG00000100403.102102.845701834.229100.197102.114101.60880HepG2TRIM56
ZC3H7BENSG00000100403.103217.422102420.480700.410504.998003.78810HepG2TUFM
ZC3H7BENSG00000100403.103078.832303509.63200-0.188902.513801.84250HepG2UPF1
ZC3H7BENSG00000100403.102565.524502972.95540-0.212603.184702.47300HepG2ZC3H8
ZC3H7BENSG00000100403.102497.307103705.25260-0.569207.529106.63840K562AQR
ZC3H7BENSG00000100403.101644.445602029.14730-0.303302.199501.42810K562BOP1
ZC3H7BENSG00000100403.102483.141301981.173900.325702.432101.45630K562CCAR1
ZC3H7BENSG00000100403.103847.784403182.922700.273603.909002.45720K562DDX21
ZC3H7BENSG00000100403.102879.416801951.223000.561304.102202.81060K562EIF3D
ZC3H7BENSG00000100403.101628.825001060.574500.6189010.846209.26190K562EIF3G
ZC3H7BENSG00000100403.102319.657101952.268200.248702.573601.47400K562EIF4B
ZC3H7BENSG00000100403.106093.948804703.086100.373706.940005.47000K562EIF4G2
ZC3H7BENSG00000100403.102527.148601892.306200.417306.257504.15800K562EWSR1
ZC3H7BENSG00000100403.101202.650101831.83860-0.607106.425304.57870K562FKBP4
ZC3H7BENSG00000100403.101749.694202195.26030-0.327302.725401.87870K562FMR1
ZC3H7BENSG00000100403.10663.05580937.65160-0.499905.376603.44970K562FUS
ZC3H7BENSG00000100403.10346.19560974.91080-1.4937013.9942012.13120K562G3BP2
ZC3H7BENSG00000100403.103325.187604066.92510-0.290502.845002.07980K562GRSF1
ZC3H7BENSG00000100403.102472.015801883.358600.392304.189002.75100K562HNRNPF
ZC3H7BENSG00000100403.102481.612401596.208300.636503.558902.33840K562IGF2BP2
ZC3H7BENSG00000100403.101282.660501758.92800-0.455602.985902.01140K562KRR1
ZC3H7BENSG00000100403.102834.292002139.349500.405703.434701.76060K562LIN28B
ZC3H7BENSG00000100403.102378.825801672.676000.508004.176403.02460K562MATR3
ZC3H7BENSG00000100403.102351.364801628.698300.529704.155303.35840K562PTBP1
ZC3H7BENSG00000100403.104499.588905458.48060-0.278703.399002.21100K562PUM1
ZC3H7BENSG00000100403.102407.455901725.475000.480406.540405.01530K562RCC2
ZC3H7BENSG00000100403.102280.017301771.272500.364202.918001.88700K562RPS3
ZC3H7BENSG00000100403.103353.227002640.457900.344702.364501.36870K562SAFB
ZC3H7BENSG00000100403.101242.377401013.257700.294002.442301.64050K562SF3B4
ZC3H7BENSG00000100403.102132.758601635.659100.382703.690702.45870K562SRFBP1
ZC3H7BENSG00000100403.102480.026401709.692600.536507.596505.72080K562SRSF4
ZC3H7BENSG00000100403.102079.317101508.423700.463002.461101.47780K562SRSF5
ZC3H7BENSG00000100403.10636.30810956.95000-0.588702.776301.31030K562TAF15
ZC3H7BENSG00000100403.102119.609801615.767300.391502.890602.16780K562TARDBP
ZC3H7BENSG00000100403.102280.325401558.671400.548803.182802.29660K562TIA1
ZC3H7BENSG00000100403.102211.790901530.253600.531303.981102.63360K562TRA2A
ZC3H7BENSG00000100403.102584.612001932.413600.419404.528303.25140K562TRIM56
ZC3H7BENSG00000100403.10740.14830975.60550-0.398503.771502.83210K562U2AF2
ZC3H7BENSG00000100403.104094.640403628.344300.174302.399801.60730K562WDR43
ZC3H7BENSG00000100403.103480.098204390.31000-0.335203.674802.17810K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZC3H7B is not available on ENCORE database.





4 RBPs can affect the splicing of ZC3H7B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZC3H7BENSG00000100403.10chr22+417281744172823141726026417261074173431641734359-0.113000.000830.02383excludedK562AGGF1
A3SSZC3H7BENSG00000100403.10chr22+417420064174221241742065417422124173941841739580-0.103000.000240.02394shorterHepG2SF3A3
A3SSZC3H7BENSG00000100403.10chr22+417358194173614141735944417361414173500441735195-0.186000.003020.06390shorterHepG2U2AF2
MXEZC3H7BENSG00000100403.10chr22+4172817441728231417343164173435941726026417261074173500441735195-0.148000.005160.088402includedK562SBDS

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZC3H7B is not avaliable on ENCORE database.