ZC3H7B

General Information

Gene Name : ZC3H7B
Gene ID : ENSG00000100403.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ZC3H7B)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ZC3H7B	ENSG00000100403.11	7.28	16.79	12.04	ENCSR000AEF
HepG2	ZC3H7B	ENSG00000100403.11	45.13	21.21	33.17	ENCSR985KAT
K562	ZC3H7B	ENSG00000100403.11	28.88	20.59	24.73	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ZC3H7B is not avaliable on ENCORE database.

Proteins bound to RNA

ZC3H7B RNA is bound by 25 proteins.

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eCLIP assay for ZC3H7B is not avaliable on ENCORE database.

25 proteins are bound to ZC3H7B RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr22	41755922	41756016	+	3'-UTR	6.21210	54.12494	K562	UPF1
chr22	41755396	41755534	+	3'-UTR	5.34014	32.24233	K562	UPF1
chr22	41755632	41755713	+	3'-UTR	5.92303	27.60901	K562	UPF1
chr22	41753890	41753976	+	3'-UTR	4.98290	25.98943	K562	UPF1
chr22	41755202	41755275	+	3'-UTR	5.23843	23.91241	K562	UPF1
chr22	41735192	41735309	+	CDS,intron-Distal,intron-Proximal	6.76247	22.27579	K562	AQR
chr22	41754025	41754100	+	3'-UTR	5.11273	21.03004	K562	UPF1
chr22	41754243	41754361	+	3'-UTR	5.28974	20.74309	K562	UPF1
chr22	41753551	41753640	+	3'-UTR	5.39133	20.43494	HepG2	UPF1
chr22	41753795	41753882	+	3'-UTR	6.13488	20.04501	HepG2	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 108 entries

eCLIP assay for ZC3H7B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ZC3H7B is not available on ENCORE database.
77 RBPs can affect the levels of ZC3H7B.

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The Knockdown/knockout RNA-Seq assay for ZC3H7B is not available on ENCORE database.

77 RBPs can affect the gene expression of ZC3H7B :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ZC3H7B	ENSG00000100403.10	2137.17480	4212.92890	-0.97910	36.71300	35.24830	HepG2	RBM22
ZC3H7B	ENSG00000100403.10	2481.83940	3796.88100	-0.61340	19.43260	18.41890	HepG2	SRSF1
ZC3H7B	ENSG00000100403.10	3735.52850	2629.96610	0.50620	18.70210	17.43910	HepG2	PUM1
ZC3H7B	ENSG00000100403.10	2413.33160	1662.39830	0.53770	15.48710	14.06880	HepG2	DNAJC2
ZC3H7B	ENSG00000100403.10	2417.82660	1666.14350	0.53710	14.16960	12.88050	HepG2	SAFB2
ZC3H7B	ENSG00000100403.10	346.19560	974.91080	-1.49370	13.99420	12.13120	K562	G3BP2
ZC3H7B	ENSG00000100403.10	2063.63090	3089.07330	-0.58200	11.84190	10.84120	HepG2	SRSF9
ZC3H7B	ENSG00000100403.10	1525.07130	3617.84160	-1.24630	11.96510	10.35160	HepG2	SNRNP70
ZC3H7B	ENSG00000100403.10	3756.58760	2781.88180	0.43330	11.27950	10.16770	HepG2	SUCLG1
ZC3H7B	ENSG00000100403.10	1628.82500	1060.57450	0.61890	10.84620	9.26190	K562	EIF3G
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 86 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ZC3H7B is not available on ENCORE database.

4 RBPs can affect the splicing of ZC3H7B :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	ZC3H7B	ENSG00000100403.10	chr22	+	41742006	41742212			41742065	41742212	41739418	41739580	-0.10300	0.00024	0.02394	shorter	HepG2	SF3A3
SE	ZC3H7B	ENSG00000100403.10	chr22	+	41728174	41728231			41726026	41726107	41734316	41734359	-0.11300	0.00083	0.02383	excluded	K562	AGGF1
A3SS	ZC3H7B	ENSG00000100403.10	chr22	+	41735819	41736141			41735944	41736141	41735004	41735195	-0.18600	0.00302	0.06390	shorter	HepG2	U2AF2
MXE	ZC3H7B	ENSG00000100403.10	chr22	+	41728174	41728231	41734316	41734359	41726026	41726107	41735004	41735195	-0.14800	0.00516	0.08840	2included	K562	SBDS

Showing 1 to 4 of 4 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ZC3H7B

General Information

Functions

Localization

Domains (AlphaFold: ZC3H7B)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ZC3H7B is not avaliable on ENCORE database.

25 proteins are bound to ZC3H7B RNA:

eCLIP assay for ZC3H7B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ZC3H7B is not available on ENCORE database.

77 RBPs can affect the gene expression of ZC3H7B :

The Knockdown/knockout RNA-Seq assay for ZC3H7B is not available on ENCORE database.

4 RBPs can affect the splicing of ZC3H7B :

The Knockdown/knockout RNA-Seq assay for ZC3H7B is not avaliable on ENCORE database.