PCSK9

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PCSK9	ENSG00000169174.10	0.00	0.00	0.00	ENCSR000AEF
HepG2	PCSK9	ENSG00000169174.10	53.73	18.42	36.08	ENCSR985KAT
K562	PCSK9	ENSG00000169174.10	23.42	17.27	20.34	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PCSK9 is not avaliable on ENCORE database.

Proteins bound to RNA

PCSK9 RNA is bound by 37 proteins.

eCLIP assay for PCSK9 is not avaliable on ENCORE database.

37 proteins are bound to PCSK9 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	55524177	55524273	+	3'-UTR,CDS	5.02093	22.81761	HepG2	SND1
chr1	55525227	55525251	+	3'-UTR,CDS,intron-Distal	3.54380	9.27333	HepG2	UPF1
chr1	55517957	55518063	+	3'-UTR,CDS	4.45318	44.24052	HepG2	RPS3
chr1	55530374	55530508	+	3'-UTR	4.03396	12.00775	HepG2	TIAL1
chr1	55524318	55524354	+	3'-UTR,CDS,intron-Proximal	5.00698	12.21485	K562	AQR
chr1	55529501	55529568	+	3'-UTR	4.76384	32.48179	HepG2	AKAP1
chr1	55517001	55517059	+	3'-UTR,intron-Distal	5.56510	9.68097	K562	RBM15
chr1	55530378	55530435	+	3'-UTR	4.67988	20.92852	K562	TIA1
chr1	55518001	55518038	+	3'-UTR,CDS	3.92773	5.56131	HepG2	SND1
chr1	55517894	55517962	+	3'-UTR,CDS,intron-Proximal	4.33227	4.27476	HepG2	AQR
chr1	55529645	55529763	+	3'-UTR	5.82080	61.74737	HepG2	UPF1
chr1	55529950	55530020	+	3'-UTR	5.65780	28.17111	HepG2	AKAP1
chr1	55529434	55529486	+	3'-UTR	4.76582	26.47611	HepG2	AKAP1
chr1	55529202	55529261	+	3'-UTR,CDS	3.98269	24.61199	HepG2	UPF1
chr1	55524273	55524321	+	3'-UTR,CDS,intron-Proximal	5.71536	16.75285	HepG2	SND1
chr1	55530425	55530497	+	3'-UTR	5.38986	35.79569	K562	UPF1
chr1	55530427	55530496	+	3'-UTR	5.11313	17.11883	HepG2	DDX6
chr1	55529049	55529095	+	3'-UTR,CDS	4.73221	25.88560	HepG2	UPF1
chr1	55527047	55527150	+	3'-UTR,CDS,intron-Proximal	4.71709	15.20288	HepG2	SND1
chr1	55529877	55529942	+	3'-UTR	5.10306	30.16635	HepG2	UPF1
chr1	55530260	55530294	+	3'-UTR	5.61283	12.91326	HepG2	AKAP1
chr1	55529695	55529744	+	3'-UTR	3.13359	9.68014	HepG2	DDX55
chr1	55530381	55530423	+	3'-UTR	3.59326	16.34818	HepG2	DDX55
chr1	55527150	55527186	+	3'-UTR,CDS	4.76961	6.07295	HepG2	SND1
chr1	55529325	55529364	+	3'-UTR	3.70865	10.45443	HepG2	AKAP1
chr1	55530150	55530178	+	3'-UTR	3.44823	13.15192	HepG2	LARP4
chr1	55530131	55530205	+	3'-UTR	5.30254	36.69277	HepG2	UPF1
chr1	55518067	55518084	+	3'-UTR,CDS	4.16939	6.82656	K562	SND1
chr1	55530178	55530204	+	3'-UTR	3.07513	11.12070	HepG2	LARP4
chr1	55530152	55530174	+	3'-UTR	6.33485	17.95344	HepG2	TIAL1
chr1	55517950	55517981	+	3'-UTR,CDS,intron-Proximal	4.44520	14.03682	K562	SND1
chr1	55524270	55524317	+	3'-UTR,CDS	3.71143	10.01416	K562	SND1
chr1	55530298	55530325	+	3'-UTR	5.12121	17.44157	HepG2	UPF1
chr1	55529783	55529840	+	3'-UTR	4.92187	23.29999	HepG2	AKAP1
chr1	55524288	55524319	+	3'-UTR,CDS	4.70852	17.89527	HepG2	RPS3
chr1	55530035	55530081	+	3'-UTR	6.93448	31.99168	HepG2	UPF1
chr1	55529772	55529839	+	3'-UTR	4.55515	18.68027	K562	UPF1
chr1	55518054	55518079	+	3'-UTR,CDS	5.51269	7.33420	HepG2	SND1
chr1	55529584	55529647	+	3'-UTR	4.08791	16.40140	K562	UPF1
chr1	55529782	55529856	+	3'-UTR	7.38380	46.75927	HepG2	UPF1
chr1	55529271	55529290	+	3'-UTR	4.25945	11.49605	HepG2	RPS3
chr1	55529933	55529996	+	3'-UTR	3.94875	16.74425	K562	UPF1
chr1	55530378	55530415	+	3'-UTR	3.62201	7.88559	HepG2	LARP4
chr1	55529307	55529357	+	3'-UTR	3.13132	5.60526	K562	LIN28B
chr1	55518285	55518377	+	3'-UTR,CDS,intron-Proximal	3.00371	7.75370	K562	BUD13
chr1	55525194	55525217	+	3'-UTR,CDS,intron-Distal	3.78113	6.50171	HepG2	SND1
chr1	55530374	55530425	+	3'-UTR	5.98326	34.23608	K562	UPF1
chr1	55530133	55530153	+	3'-UTR	6.60410	20.97637	K562	UPF1
chr1	55518040	55518067	+	3'-UTR,CDS	3.34343	5.28046	K562	SND1
chr1	55529865	55529931	+	3'-UTR	4.01109	15.96956	HepG2	AKAP1
chr1	55525300	55525336	+	3'-UTR,CDS,intron-Distal	4.10590	7.59025	HepG2	SND1
chr1	55525160	55525189	+	3'-UTR,CDS,intron-Distal	4.67087	17.89527	HepG2	RPS3
chr1	55517949	55517980	+	3'-UTR,CDS,intron-Proximal	4.80868	11.52585	HepG2	SND1
chr1	55529696	55529764	+	3'-UTR	4.05646	7.48372	HepG2	DDX6
chr1	55529588	55529645	+	3'-UTR	5.25756	46.09771	HepG2	UPF1
chr1	55518302	55518413	+	3'-UTR,CDS,intron-Proximal	3.73029	15.76354	K562	DDX24
chr1	55530374	55530411	+	3'-UTR	3.43538	5.76351	HepG2	LIN28B
chr1	55529942	55530011	+	3'-UTR	5.69157	41.54698	HepG2	UPF1
chr1	55529041	55529064	+	3'-UTR,CDS,intron-Proximal	4.62468	7.48518	HepG2	SND1
chr1	55525217	55525300	+	3'-UTR,CDS,intron-Distal	4.47713	15.43774	HepG2	SND1
chr1	55530177	55530216	+	3'-UTR	4.09203	26.59459	K562	UPF1
chr1	55529857	55529933	+	3'-UTR	5.29927	27.09941	K562	UPF1
chr1	55518356	55518418	+	3'-UTR,CDS	4.09088	30.79493	HepG2	RPS3
chr1	55530153	55530177	+	3'-UTR	4.74977	29.54316	K562	UPF1
chr1	55530380	55530415	+	3'-UTR	6.26349	21.48126	HepG2	AKAP1
chr1	55530146	55530212	+	3'-UTR	3.28201	6.36921	K562	DDX6
chr1	55529319	55529374	+	3'-UTR	4.43940	39.29519	HepG2	UPF1
chr1	55518271	55518363	+	3'-UTR,CDS,intron-Proximal	3.19877	9.57774	K562	EFTUD2
chr1	55525142	55525192	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.18147	7.34413	K562	BUD13
chr1	55518039	55518088	+	3'-UTR,CDS,intron-Proximal	3.31525	5.87296	K562	DDX24
chr1	55527081	55527168	+	3'-UTR,CDS	3.42882	15.33372	HepG2	RPS3
chr1	55529587	55529628	+	3'-UTR	3.44220	12.95841	HepG2	LARP4
chr1	55530418	55530513	+	3'-UTR	3.75827	22.79307	HepG2	FUBP3
chr1	55529374	55529427	+	3'-UTR	5.62767	53.27809	HepG2	UPF1
chr1	55529064	55529130	+	3'-UTR,CDS	5.92889	18.27573	HepG2	SND1
chr1	55530125	55530187	+	3'-UTR	5.55482	8.06559	K562	AKAP1
chr1	55530415	55530490	+	3'-UTR	5.16652	32.15171	HepG2	AKAP1
chr1	55529869	55529906	+	3'-UTR	3.64714	10.28466	K562	YBX3
chr1	55525124	55525199	+	3'-UTR,CDS,intron-Distal,intron-Proximal	5.27679	25.61047	K562	AQR
chr1	55530133	55530152	+	3'-UTR	4.57346	4.98572	HepG2	TIAL1
chr1	55530134	55530156	+	3'-UTR	3.23596	4.92811	HepG2	DDX55
chr1	55529056	55529127	+	3'-UTR,CDS	4.06622	31.16456	HepG2	RPS3
chr1	55527213	55527227	+	3'-UTR,CDS	3.41392	8.73423	HepG2	UPF1
chr1	55530130	55530204	+	3'-UTR	6.23402	37.99041	HepG2	AKAP1
chr1	55530263	55530318	+	3'-UTR	5.62459	16.13372	K562	UPF1
chr1	55525220	55525275	+	3'-UTR,CDS,intron-Distal	3.50027	11.38868	K562	SND1
chr1	55518334	55518383	+	3'-UTR,CDS	4.32067	8.34613	HepG2	SND1
chr1	55525221	55525261	+	3'-UTR,CDS,intron-Distal	3.17188	11.15502	HepG2	RPS3
chr1	55529665	55529764	+	3'-UTR	3.94331	26.45918	HepG2	AKAP1
chr1	55527051	55527096	+	3'-UTR,CDS	3.77937	8.11686	K562	SND1
chr1	55530453	55530498	+	3'-UTR	4.74190	3.54514	K562	TIA1
chr1	55530154	55530208	+	3'-UTR	4.79449	11.63467	HepG2	TIA1
chr1	55529499	55529561	+	3'-UTR	4.10983	18.04441	K562	UPF1
chr1	55529582	55529653	+	3'-UTR	4.43357	28.06909	HepG2	AKAP1
chr1	55530415	55530497	+	3'-UTR	4.37647	29.52243	HepG2	LARP4
chr1	55529647	55529772	+	3'-UTR	6.07863	35.04290	K562	UPF1
chr1	55530374	55530433	+	3'-UTR	5.98914	15.68240	HepG2	TIA1
chr1	55529493	55529566	+	3'-UTR	5.86162	60.87538	HepG2	UPF1
chr1	55530049	55530071	+	3'-UTR	4.24522	10.88945	K562	UPF1
chr1	55525158	55525178	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.90429	7.31650	HepG2	SND1
chr1	55529364	55529434	+	3'-UTR	5.12499	30.46974	HepG2	AKAP1
chr1	55530174	55530206	+	3'-UTR	5.25216	15.17599	HepG2	TIAL1
chr1	55527167	55527200	+	3'-UTR,CDS	3.10023	3.86050	K562	SND1
chr1	55529879	55529936	+	3'-UTR	3.60650	15.55696	HepG2	DDX55
chr1	55505240	55505366	+	5'-UTR	3.22244	4.62632	K562	DDX3X
chr1	55505878	55505978	+	5'-UTR,intron-Distal	4.13411	6.07385	K562	GTF2F1
chr1	55505255	55505357	+	5'-UTR	3.71836	32.73848	HepG2	RPS3
chr1	55505951	55506010	+	5'-UTR,intron-Distal	3.76640	6.99200	HepG2	EFTUD2
chr1	55505856	55505923	+	5'-UTR,intron-Distal	3.78303	5.15405	HepG2	PRPF4
chr1	55505482	55505621	+	5'-UTR,CDS	4.19447	63.26155	HepG2	RPS3
chr1	55505406	55505469	+	5'-UTR	3.09516	14.86280	HepG2	RPS3
chr1	55505890	55505922	+	5'-UTR,intron-Distal	4.09558	3.80314	K562	CSTF2T
chr1	55505273	55505328	+	5'-UTR	4.59999	4.65678	K562	METAP2
chr1	55505896	55505964	+	5'-UTR,intron-Distal	3.17842	5.10926	HepG2	GTF2F1
chr1	55505923	55506014	+	5'-UTR,intron-Distal	3.51941	6.02920	HepG2	PRPF4
chr1	55505236	55505331	+	5'-UTR	4.08901	400.00000	HepG2	DDX3X
chr1	55512195	55512222	+	CDS,intron-Distal,intron-Proximal	4.60078	16.63865	K562	SND1
chr1	55505701	55505716	+	CDS	4.66487	9.16010	K562	SND1
chr1	55509566	55509632	+	CDS,intron-Distal	4.54404	7.21038	HepG2	SND1
chr1	55509653	55509707	+	CDS,intron-Distal	4.44139	12.97045	K562	SND1
chr1	55512222	55512320	+	CDS,intron-Distal,intron-Proximal	5.81282	53.12836	K562	SND1
chr1	55509690	55509705	+	CDS,intron-Distal	4.19576	16.49042	HepG2	RPS3
chr1	55523080	55523109	+	CDS,intron-Proximal	3.30847	12.14082	HepG2	RPS3
chr1	55505664	55505690	+	CDS	3.60419	5.03100	HepG2	SND1
chr1	55505706	55505772	+	CDS,intron-Proximal	3.66166	7.72177	HepG2	PRPF8
chr1	55523727	55523754	+	CDS	3.27511	9.16392	HepG2	RPS3
chr1	55523003	55523023	+	CDS,intron-Proximal	4.28996	5.23222	HepG2	SND1
chr1	55529192	55529251	+	CDS	3.69251	5.03953	HepG2	SND1
chr1	55512194	55512206	+	CDS,intron-Distal,intron-Proximal	3.91518	5.56131	HepG2	SND1
chr1	55505621	55505694	+	CDS	4.82223	52.33409	HepG2	RPS3
chr1	55521841	55521851	+	CDS	4.36551	7.99227	HepG2	RPS3
chr1	55512300	55512351	+	CDS,intron-Distal,intron-Proximal	4.33227	4.27476	HepG2	AQR
chr1	55523782	55523876	+	CDS,intron-Proximal	4.82198	20.31719	K562	SND1
chr1	55505712	55505756	+	CDS,intron-Proximal	4.95243	6.74224	HepG2	AQR
chr1	55512250	55512318	+	CDS,intron-Distal	5.40949	32.75597	HepG2	RPS3
chr1	55523083	55523111	+	CDS,intron-Proximal	3.16267	3.50005	K562	RBM15
chr1	55509466	55509574	+	CDS,intron-Distal,intron-Proximal	3.87569	8.51163	HepG2	AQR
chr1	55509479	55509568	+	CDS,intron-Distal,intron-Proximal	4.99279	38.85761	K562	AQR
chr1	55521753	55521809	+	CDS	6.32784	13.95300	HepG2	SND1
chr1	55523186	55523203	+	CDS,intron-Proximal	5.24548	14.81877	K562	AQR
chr1	55521610	55521671	+	CDS,intron-Proximal	3.68676	14.93181	HepG2	SF3A3
chr1	55505716	55505759	+	CDS,intron-Proximal	4.86475	39.72131	K562	AQR
chr1	55523716	55523776	+	CDS	4.76712	19.38072	K562	SND1
chr1	55509518	55509613	+	CDS,intron-Distal	3.76984	31.48003	HepG2	RPS3
chr1	55512301	55512319	+	CDS,intron-Distal	5.59488	14.01866	HepG2	SND1
chr1	55521690	55521797	+	CDS	3.79111	29.72061	HepG2	RPS3
chr1	55521697	55521753	+	CDS	5.21187	11.30243	HepG2	SND1
chr1	55521674	55521759	+	CDS	4.01949	9.75360	K562	SND1
chr1	55523069	55523109	+	CDS,intron-Proximal	3.68707	6.62503	HepG2	SND1
chr1	55523109	55523129	+	CDS	3.69732	17.37328	HepG2	RPS3
chr1	55509515	55509522	+	CDS,intron-Distal,intron-Proximal	3.76999	8.01224	K562	SND1
chr1	55522939	55523042	+	CDS,intron-Distal,intron-Proximal	5.28492	18.86986	HepG2	AQR
chr1	55523808	55523868	+	CDS,intron-Proximal	4.20239	33.18951	HepG2	RPS3
chr1	55505694	55505717	+	CDS	3.32947	9.84427	HepG2	RPS3
chr1	55512216	55512318	+	CDS,intron-Distal	3.07916	7.33292	K562	ZNF622
chr1	55524183	55524247	+	CDS	5.16215	17.74523	K562	SND1
chr1	55523725	55523768	+	CDS	3.47842	6.61418	HepG2	SND1
chr1	55523129	55523161	+	CDS	3.83032	20.92471	HepG2	RPS3
chr1	55523064	55523112	+	CDS,intron-Proximal	3.54344	11.15306	K562	SND1
chr1	55505636	55505679	+	CDS	3.65701	9.08183	K562	SND1
chr1	55529201	55529253	+	CDS	4.36687	18.79727	HepG2	RPS3
chr1	55512206	55512301	+	CDS,intron-Distal	5.83668	36.58293	HepG2	SND1
chr1	55523005	55523022	+	CDS,intron-Proximal	4.33091	8.83372	K562	SND1
chr1	55518440	55518586	+	CDS,intron-Distal,intron-Proximal	3.05705	8.40422	K562	PRPF8
chr1	55509678	55509707	+	CDS,intron-Distal	4.86185	8.05232	HepG2	SND1
chr1	55523144	55523162	+	CDS	4.33447	10.85424	K562	SND1
chr1	55523112	55523144	+	CDS	3.75642	13.55000	K562	SND1
chr1	55521835	55521862	+	CDS	5.87550	10.52316	K562	SND1
chr1	55509522	55509551	+	CDS,intron-Distal	3.60452	9.99153	K562	SND1
chr1	55522994	55523047	+	CDS,intron-Distal,intron-Proximal	6.42172	27.17135	K562	AQR
chr1	55523807	55523878	+	CDS,intron-Proximal	4.92539	18.93326	HepG2	SND1
chr1	55528725	55528791	+	intron-Distal	4.49141	4.65580	K562	GTF2F1
chr1	55522894	55522958	+	intron-Distal,intron-Proximal	4.06721	7.13906	K562	BUD13
chr1	55517208	55517246	+	intron-Distal,intron-Proximal	3.96184	4.22415	K562	PTBP1
chr1	55512748	55512815	+	intron-Distal	4.63307	5.04769	HepG2	PTBP1
chr1	55525347	55525400	+	intron-Distal,intron-Proximal	5.67206	10.44569	K562	AQR
chr1	55506173	55506261	+	intron-Distal,intron-Proximal	3.05255	4.58795	K562	EWSR1
chr1	55524378	55524430	+	intron-Distal,intron-Proximal	3.19666	6.00494	K562	BUD13
chr1	55521078	55521237	+	intron-Distal	3.21002	3.45586	K562	HNRNPU
chr1	55522120	55522168	+	intron-Distal	4.14447	9.03062	K562	AQR
chr1	55522038	55522093	+	intron-Distal	3.87220	4.51027	K562	BUD13
chr1	55522294	55522362	+	intron-Distal	4.91183	4.22343	HepG2	XPO5
chr1	55522946	55522994	+	intron-Distal,intron-Proximal	6.16441	22.84879	K562	AQR
chr1	55506215	55506275	+	intron-Distal	3.01494	5.00217	K562	CSTF2T
chr1	55517131	55517206	+	intron-Distal,intron-Proximal	3.65799	7.62589	K562	PTBP1
chr1	55512562	55512603	+	intron-Distal	4.22335	3.28841	HepG2	PTBP1
chr1	55524377	55524427	+	intron-Distal,intron-Proximal	3.64120	7.35604	HepG2	EFTUD2
chr1	55516371	55516438	+	intron-Distal	4.48530	4.96047	K562	SLTM
chr1	55514929	55515003	+	intron-Distal	5.32891	7.32644	K562	SLTM
chr1	55522240	55522266	+	intron-Distal	3.32493	3.54718	K562	PRPF8
chr1	55506403	55506467	+	intron-Distal	4.42082	4.14056	K562	EWSR1
chr1	55524374	55524432	+	intron-Distal,intron-Proximal	4.43334	8.74918	K562	TARDBP
chr1	55522184	55522282	+	intron-Distal	4.85716	6.49770	K562	HNRNPK
chr1	55512808	55512901	+	intron-Distal	3.16144	5.56436	K562	PTBP1
chr1	55522168	55522219	+	intron-Distal	4.42789	11.32600	K562	AQR
chr1	55525073	55525125	+	intron-Distal,intron-Proximal	4.29329	4.39969	K562	TARDBP
chr1	55524849	55524902	+	intron-Distal	5.03101	6.00625	K562	EIF4G2
chr1	55505759	55505849	+	intron-Distal,intron-Proximal	3.91809	17.47597	K562	AQR
chr1	55515278	55515333	+	intron-Distal	3.28031	3.12255	HepG2	XPO5
chr1	55528375	55528430	+	intron-Distal	3.34545	3.92899	HepG2	PRPF4
chr1	55524364	55524434	+	intron-Distal,intron-Proximal	4.16785	20.59030	K562	EIF4G2
chr1	55517145	55517203	+	intron-Distal,intron-Proximal	3.28386	6.48384	HepG2	PTBP1
chr1	55524354	55524436	+	intron-Distal,intron-Proximal	4.56140	31.98737	K562	AQR
chr1	55521944	55522009	+	intron-Distal,intron-Proximal	3.83449	8.15794	K562	BUD13
chr1	55513381	55513471	+	intron-Distal	3.02965	3.35563	K562	FUS
chr1	55518507	55518591	+	intron-Distal,intron-Proximal	5.39908	10.88793	HepG2	EFTUD2
chr1	55513419	55513480	+	intron-Distal	3.83646	3.48567	K562	SLTM
chr1	55506174	55506242	+	intron-Distal,intron-Proximal	3.42912	3.11118	HepG2	PRPF4
chr1	55523602	55523686	+	intron-Distal,intron-Proximal	4.07622	6.68220	K562	TARDBP
chr1	55525122	55525135	+	intron-Distal,intron-Proximal	5.28811	6.83278	K562	PRPF8
chr1	55517140	55517197	+	intron-Distal,intron-Proximal	3.87858	6.98813	HepG2	TIAL1
chr1	55521935	55522006	+	intron-Distal,intron-Proximal	4.38598	9.49243	HepG2	EFTUD2
chr1	55514897	55514982	+	intron-Distal	4.00610	3.52365	K562	FUS
chr1	55512452	55512527	+	intron-Distal	3.69276	3.76553	K562	PRPF8
chr1	55512827	55512903	+	intron-Distal	3.23736	3.94922	HepG2	PTBP1
chr1	55517213	55517247	+	intron-Distal,intron-Proximal	3.20182	3.59395	HepG2	PTBP1
chr1	55516687	55516732	+	intron-Distal	3.13116	3.30843	K562	SLTM
chr1	55522029	55522078	+	intron-Distal	3.31653	3.73797	K562	CSTF2T
chr1	55521925	55521994	+	intron-Distal,intron-Proximal	5.00698	16.75572	K562	AQR
chr1	55508513	55508581	+	intron-Distal	3.50719	4.25264	K562	NONO
chr1	55509707	55509762	+	intron-Distal,intron-Proximal	5.98075	10.48996	K562	AQR
chr1	55523617	55523680	+	intron-Proximal	3.89217	7.75469	HepG2	EFTUD2
chr1	55523627	55523680	+	intron-Proximal	3.91072	4.74394	K562	EIF4G2
chr1	55517907	55517950	+	intron-Proximal	3.55675	6.87160	K562	AQR
chr1	55518486	55518553	+	intron-Proximal	4.04909	4.11859	HepG2	PRPF8
chr1	55523203	55523232	+	intron-Proximal	6.41611	18.58475	K562	AQR
chr1	55517876	55517940	+	intron-Proximal	5.12971	13.03281	K562	SF3B4
chr1	55523884	55523923	+	intron-Proximal	5.16441	10.60410	K562	AQR
chr1	55518492	55518542	+	intron-Proximal	6.17461	10.23035	HepG2	RBM22
chr1	55521878	55521902	+	intron-Proximal	5.14582	5.17615	K562	AQR
chr1	55521862	55521878	+	intron-Proximal	5.20859	5.69951	K562	AQR
chr1	55518469	55518509	+	intron-Proximal	3.50107	6.69182	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for PCSK9 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PCSK9 is not available on ENCORE database.
186 RBPs can affect the levels of PCSK9.

The Knockdown/knockout RNA-Seq assay for PCSK9 is not available on ENCORE database.

186 RBPs can affect the gene expression of PCSK9 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PCSK9	ENSG00000169174.9	411.41290	2311.39250	-2.49010	11.71150	9.72280	HepG2	AATF
PCSK9	ENSG00000169174.9	2283.18300	4600.78460	-1.01080	3.08450	2.08820	HepG2	ABCF1
PCSK9	ENSG00000169174.9	1650.85070	5909.30070	-1.83980	52.25750	50.43830	HepG2	ACO1
PCSK9	ENSG00000169174.9	3676.23750	1208.35540	1.60510	19.84480	17.60380	HepG2	ADAR
PCSK9	ENSG00000169174.9	1250.28650	15148.23250	-3.59880	109.01690	106.54700	HepG2	AKAP1
PCSK9	ENSG00000169174.9	9340.46700	12533.22920	-0.42420	4.35320	3.37700	HepG2	ASCC1
PCSK9	ENSG00000169174.9	5528.86250	4565.24210	0.27620	2.79980	2.11010	HepG2	AUH
PCSK9	ENSG00000169174.9	3855.27650	2159.39830	0.83610	4.65560	3.43930	HepG2	BCCIP
PCSK9	ENSG00000169174.9	4049.72280	1875.92080	1.11010	11.92820	10.24130	HepG2	BCLAF1
PCSK9	ENSG00000169174.9	2324.97090	735.84580	1.65960	9.87240	8.83140	HepG2	BOP1
PCSK9	ENSG00000169174.9	4735.31240	1628.88520	1.53950	8.59530	7.34280	HepG2	CALR
PCSK9	ENSG00000169174.9	3617.53140	5907.08530	-0.70740	13.51040	12.27050	HepG2	CKAP4
PCSK9	ENSG00000169174.9	6483.29250	675.46550	3.26270	22.41950	20.70030	HepG2	CPSF6
PCSK9	ENSG00000169174.9	2271.57870	3785.93020	-0.73700	3.03790	1.88180	HepG2	CPSF7
PCSK9	ENSG00000169174.9	636.29700	2368.51410	-1.89620	6.57320	4.18710	HepG2	CSTF2T
PCSK9	ENSG00000169174.9	1648.68350	3231.97110	-0.97110	24.58700	23.06590	HepG2	CELF1
PCSK9	ENSG00000169174.9	13332.75960	3474.95600	1.93980	32.59250	30.59080	HepG2	DAZAP1
PCSK9	ENSG00000169174.9	1886.19100	5464.82850	-1.53470	43.18710	40.96050	HepG2	DDX19B
PCSK9	ENSG00000169174.9	4204.48180	2545.66410	0.72380	7.11600	6.07980	HepG2	DDX21
PCSK9	ENSG00000169174.9	3941.78350	2494.86100	0.65980	5.10290	3.85540	HepG2	DDX24
PCSK9	ENSG00000169174.9	1150.24330	1986.18860	-0.78810	3.13590	1.76860	HepG2	DDX27
PCSK9	ENSG00000169174.9	11814.85980	14509.44100	-0.29640	2.29200	1.71760	HepG2	DDX3X
PCSK9	ENSG00000169174.9	2529.03350	1418.30280	0.83430	14.86000	12.27910	HepG2	DDX47
PCSK9	ENSG00000169174.9	1588.19010	2212.08430	-0.47800	6.35260	4.41120	HepG2	DDX52
PCSK9	ENSG00000169174.9	343.41520	2123.35970	-2.62830	14.33140	12.75190	HepG2	DDX55
PCSK9	ENSG00000169174.9	4870.52630	3258.65850	0.57970	3.55110	2.41170	HepG2	DDX5
PCSK9	ENSG00000169174.9	3620.34950	12467.25310	-1.78390	32.03910	30.27530	HepG2	DDX6
PCSK9	ENSG00000169174.9	3044.51470	1173.56090	1.37520	40.49580	37.69410	HepG2	DHX30
PCSK9	ENSG00000169174.9	3454.43230	1216.75810	1.50530	42.40810	40.09060	HepG2	DNAJC21
PCSK9	ENSG00000169174.9	1031.03540	1206.00750	-0.22610	2.37480	1.76160	HepG2	DNAJC2
PCSK9	ENSG00000169174.9	1418.52450	2638.97200	-0.89560	15.04010	13.16340	HepG2	EEF2
PCSK9	ENSG00000169174.9	744.79440	2199.67620	-1.56240	39.98480	36.62330	HepG2	EFTUD2
PCSK9	ENSG00000169174.9	20816.20090	11981.75490	0.79680	13.43930	12.20010	HepG2	EIF2S1
PCSK9	ENSG00000169174.9	1439.51380	3487.90660	-1.27680	6.12680	4.43950	HepG2	EIF2S2
PCSK9	ENSG00000169174.9	654.67000	2142.07510	-1.71020	43.67780	40.65700	HepG2	EIF3D
PCSK9	ENSG00000169174.9	8541.85650	12893.71360	-0.59400	3.41360	2.65190	HepG2	EIF4B
PCSK9	ENSG00000169174.9	2313.59440	3428.43520	-0.56740	11.80190	10.31060	HepG2	EIF4G1
PCSK9	ENSG00000169174.9	11124.81950	3284.18960	1.76010	68.13620	64.98450	HepG2	EIF4G2
PCSK9	ENSG00000169174.9	3936.73470	5241.15050	-0.41290	3.53370	2.86720	HepG2	ETF1
PCSK9	ENSG00000169174.9	3631.29610	5773.61600	-0.66900	6.37160	5.10340	HepG2	EWSR1
PCSK9	ENSG00000169174.9	1390.99800	1914.84330	-0.46110	6.23180	4.44100	HepG2	FAM120A
PCSK9	ENSG00000169174.9	2305.06800	977.21240	1.23800	11.57340	7.91420	HepG2	FASTKD1
PCSK9	ENSG00000169174.9	1437.28780	2427.88730	-0.75640	2.52770	1.43090	HepG2	FASTKD2
PCSK9	ENSG00000169174.9	976.15340	4645.08390	-2.25050	9.29840	7.99570	HepG2	FIP1L1
PCSK9	ENSG00000169174.9	2446.44300	3251.18590	-0.41030	3.38430	1.55080	HepG2	FMR1
PCSK9	ENSG00000169174.9	2989.40100	676.79180	2.14300	3.71830	2.53540	HepG2	FTO
PCSK9	ENSG00000169174.9	5977.21300	10148.01600	-0.76370	17.40040	15.51680	HepG2	FUBP3
PCSK9	ENSG00000169174.9	901.15290	2377.32950	-1.39950	5.91310	4.33160	HepG2	FUS
PCSK9	ENSG00000169174.9	8009.61060	13363.10120	-0.73850	11.42890	10.12000	HepG2	FXR1
PCSK9	ENSG00000169174.9	8290.06640	12393.68090	-0.58010	6.33720	5.35150	HepG2	G3BP1
PCSK9	ENSG00000169174.9	1568.25940	2256.09850	-0.52470	5.32010	3.90200	HepG2	GNB2L1
PCSK9	ENSG00000169174.9	4102.19480	765.47080	2.42190	28.43270	26.63460	HepG2	GPKOW
PCSK9	ENSG00000169174.9	2813.11860	1036.01830	1.44100	20.98180	18.11550	HepG2	GRSF1
PCSK9	ENSG00000169174.9	1399.46700	2094.24840	-0.58160	3.41590	1.30380	HepG2	GRWD1
PCSK9	ENSG00000169174.9	1215.10890	2242.13460	-0.88380	3.06100	1.39920	HepG2	GTF2F1
PCSK9	ENSG00000169174.9	4033.21940	5641.12570	-0.48410	4.11090	2.93460	HepG2	HDGF
PCSK9	ENSG00000169174.9	821.81580	2282.78140	-1.47390	5.49490	3.48270	HepG2	HLTF
PCSK9	ENSG00000169174.9	3922.08260	1228.41490	1.67470	21.00740	19.51260	HepG2	HNRNPA1
PCSK9	ENSG00000169174.9	1649.00340	3193.68370	-0.95360	36.03090	33.43540	HepG2	HNRNPA2B1
PCSK9	ENSG00000169174.9	3325.64080	1366.38240	1.28320	8.31840	7.16740	HepG2	HNRNPC
PCSK9	ENSG00000169174.9	1897.23150	969.29730	0.96880	10.61440	7.78890	HepG2	HNRNPD
PCSK9	ENSG00000169174.9	1869.59340	478.51200	1.96600	98.41100	95.53060	HepG2	HNRNPF
PCSK9	ENSG00000169174.9	5738.99920	12555.68960	-1.12950	18.65230	16.98970	HepG2	HNRNPK
PCSK9	ENSG00000169174.9	4330.37000	3165.35630	0.45200	6.58940	5.59340	HepG2	HNRNPL
PCSK9	ENSG00000169174.9	5770.01610	730.52300	2.98150	69.94220	67.50340	HepG2	HNRNPLL
PCSK9	ENSG00000169174.9	740.33110	3203.23300	-2.11330	11.25550	9.57070	HepG2	HNRNPM
PCSK9	ENSG00000169174.9	7787.11010	3400.94810	1.19510	3.05870	1.75760	HepG2	HSPD1
PCSK9	ENSG00000169174.9	2661.77910	471.18920	2.49790	74.99610	72.20320	HepG2	IGF2BP1
PCSK9	ENSG00000169174.9	24359.20740	12596.99690	0.95130	19.32390	17.72130	HepG2	IGF2BP2
PCSK9	ENSG00000169174.9	850.72160	1386.48730	-0.70470	18.73040	17.01550	HepG2	ILF2
PCSK9	ENSG00000169174.9	2583.91620	1091.03670	1.24380	15.94570	12.77650	HepG2	ILF3
PCSK9	ENSG00000169174.9	3265.29470	1067.29550	1.61320	32.15540	28.26430	HepG2	KHDRBS1
PCSK9	ENSG00000169174.9	5772.56470	12672.12600	-1.13440	7.39190	5.66660	HepG2	KHSRP
PCSK9	ENSG00000169174.9	808.76780	1996.95690	-1.30400	29.47480	25.59110	HepG2	CCAR2
PCSK9	ENSG00000169174.9	4508.23760	5401.26260	-0.26070	2.83350	1.80600	HepG2	KIF1C
PCSK9	ENSG00000169174.9	1057.49900	2153.91790	-1.02630	3.64660	2.69430	HepG2	LARP4
PCSK9	ENSG00000169174.9	774.80390	2210.15940	-1.51220	42.70860	39.04240	HepG2	LARP7
PCSK9	ENSG00000169174.9	3359.74950	2320.85990	0.53360	7.15800	5.27360	HepG2	LIN28B
PCSK9	ENSG00000169174.9	1419.55630	2217.44740	-0.64350	6.74090	4.24500	HepG2	LSM11
PCSK9	ENSG00000169174.9	8856.14450	13441.81610	-0.60200	5.19850	4.35800	HepG2	MATR3
PCSK9	ENSG00000169174.9	543.40100	2241.74600	-2.04450	34.68820	31.50130	HepG2	METAP2
PCSK9	ENSG00000169174.9	2929.16220	745.52370	1.97410	5.23390	3.87500	HepG2	MTPAP
PCSK9	ENSG00000169174.9	5101.13010	13757.80390	-1.43140	32.65460	30.68360	HepG2	NCBP2
PCSK9	ENSG00000169174.9	4024.31050	3445.77020	0.22380	2.42530	1.71330	HepG2	NOL12
PCSK9	ENSG00000169174.9	3086.24580	647.90950	2.25190	32.51370	30.41970	HepG2	NSUN2
PCSK9	ENSG00000169174.9	3795.62960	3008.30690	0.33530	3.07120	1.37640	HepG2	NUP35
PCSK9	ENSG00000169174.9	1031.29720	1343.54560	-0.38160	4.97270	3.88020	HepG2	PARN
PCSK9	ENSG00000169174.9	815.37960	2250.15000	-1.46450	6.25840	4.74790	HepG2	PCBP2
PCSK9	ENSG00000169174.9	1275.67090	1771.47570	-0.47370	6.58670	4.74100	HepG2	PKM
PCSK9	ENSG00000169174.9	4661.02350	1210.64710	1.94480	106.83250	102.95090	HepG2	PPIL4
PCSK9	ENSG00000169174.9	3681.66760	1853.61400	0.98990	11.53200	10.11060	HepG2	PRPF4
PCSK9	ENSG00000169174.9	2546.47280	13204.76220	-2.37450	136.23500	133.90650	HepG2	PTBP1
PCSK9	ENSG00000169174.9	7208.71780	3289.34640	1.13180	25.05720	23.50630	HepG2	PUF60
PCSK9	ENSG00000169174.9	1229.54710	3491.85330	-1.50590	119.01490	116.45640	HepG2	PUM1
PCSK9	ENSG00000169174.9	8013.57040	3489.26110	1.19940	50.41140	47.88400	HepG2	PUM2
PCSK9	ENSG00000169174.9	8382.08440	14301.99490	-0.77080	6.23870	5.35320	HepG2	QKI
PCSK9	ENSG00000169174.9	214.00790	2170.43640	-3.34220	18.00700	16.36310	HepG2	RAVER1
PCSK9	ENSG00000169174.9	826.09530	5016.27660	-2.60220	114.30850	110.81760	HepG2	RBM15
PCSK9	ENSG00000169174.9	1564.31550	4380.70670	-1.48560	22.51110	21.31930	HepG2	RBM22
PCSK9	ENSG00000169174.9	10205.89170	12979.63530	-0.34680	4.70950	3.84980	HepG2	RBM25
PCSK9	ENSG00000169174.9	3410.49930	2665.06710	0.35570	3.23230	2.15550	HepG2	RBM27
PCSK9	ENSG00000169174.9	3698.63640	1081.06290	1.77440	24.31780	20.42920	HepG2	RBM47
PCSK9	ENSG00000169174.9	2354.83800	14695.98790	-2.64170	167.64250	165.16280	HepG2	NELFE
PCSK9	ENSG00000169174.9	5012.24670	13686.67090	-1.44920	79.59140	77.29350	HepG2	RECQL
PCSK9	ENSG00000169174.9	758.09130	515.60300	0.55600	3.63400	2.86950	HepG2	RPLP0
PCSK9	ENSG00000169174.9	5989.30370	2133.87500	1.48880	20.35480	18.05830	HepG2	RPS10
PCSK9	ENSG00000169174.9	505.05440	2084.51940	-2.04520	79.32510	76.87360	HepG2	RPS19
PCSK9	ENSG00000169174.9	5383.88530	1124.64480	2.25910	56.07520	52.77510	HepG2	RPS3A
PCSK9	ENSG00000169174.9	1768.89510	2508.97800	-0.50430	5.30360	3.80260	HepG2	RPS5
PCSK9	ENSG00000169174.9	890.09620	1619.02030	-0.86310	4.04150	3.11270	HepG2	RRP9
PCSK9	ENSG00000169174.9	1274.48120	2363.76950	-0.89120	3.04380	1.44250	HepG2	RTF1
PCSK9	ENSG00000169174.9	1014.39190	1208.78040	-0.25290	2.63680	2.00550	HepG2	SAFB2
PCSK9	ENSG00000169174.9	4312.44300	1059.01950	2.02570	50.10750	45.74230	HepG2	SART3
PCSK9	ENSG00000169174.9	2150.83130	1067.76220	1.01020	9.43520	6.85190	HepG2	SBDS
PCSK9	ENSG00000169174.9	1641.49500	722.94530	1.18300	3.66450	2.86170	HepG2	SF3B1
PCSK9	ENSG00000169174.9	5068.49800	13748.62870	-1.43970	80.57910	78.26050	HepG2	SF3B4
PCSK9	ENSG00000169174.9	11408.48170	3154.10770	1.85470	262.96310	258.58400	HepG2	SLBP
PCSK9	ENSG00000169174.9	852.61280	2218.44510	-1.37960	5.03380	3.71070	HepG2	SMNDC1
PCSK9	ENSG00000169174.9	878.43930	4947.97900	-2.49380	50.22500	48.78900	HepG2	SRFBP1
PCSK9	ENSG00000169174.9	4013.00120	2021.98580	0.98880	11.39430	8.53600	HepG2	SRP68
PCSK9	ENSG00000169174.9	1897.64880	14350.27880	-2.91880	199.59780	197.28310	HepG2	SRSF1
PCSK9	ENSG00000169174.9	5879.14810	3247.83060	0.85600	6.49670	5.59240	HepG2	SRSF5
PCSK9	ENSG00000169174.9	1580.29010	470.15190	1.74890	74.58840	72.19160	HepG2	SRSF7
PCSK9	ENSG00000169174.9	1383.27240	11674.44660	-3.07720	220.00230	216.95480	HepG2	SRSF9
PCSK9	ENSG00000169174.9	8273.67420	4296.24790	0.94540	53.79350	52.23660	HepG2	SSB
PCSK9	ENSG00000169174.9	5337.29950	3100.17140	0.78370	6.26910	4.50300	HepG2	STAU1
PCSK9	ENSG00000169174.9	1643.61750	978.68030	0.74790	6.46570	4.71960	HepG2	STIP1
PCSK9	ENSG00000169174.9	2704.97300	3693.60950	-0.44940	5.97420	5.12330	HepG2	SUCLG1
PCSK9	ENSG00000169174.9	6943.90950	3134.30100	1.14750	20.68760	18.37960	HepG2	SUPT6H
PCSK9	ENSG00000169174.9	5306.92550	12897.72160	-1.28120	75.21290	72.81430	HepG2	TAF15
PCSK9	ENSG00000169174.9	3332.33880	712.62220	2.22520	24.10690	22.37530	HepG2	TARDBP
PCSK9	ENSG00000169174.9	8032.85830	11852.17070	-0.56120	11.39160	9.72940	HepG2	TIA1
PCSK9	ENSG00000169174.9	2537.15570	1318.92580	0.94370	5.12160	4.48440	HepG2	TIAL1
PCSK9	ENSG00000169174.9	4357.09990	1330.70770	1.71110	99.67260	96.93350	HepG2	TRIM56
PCSK9	ENSG00000169174.9	595.75760	1702.01270	-1.51440	26.58280	23.02090	HepG2	TROVE2
PCSK9	ENSG00000169174.9	2090.08390	3972.05180	-0.92630	3.63260	2.91690	HepG2	U2AF1
PCSK9	ENSG00000169174.9	1558.77600	3401.68170	-1.12580	19.63890	17.42200	HepG2	UBE2L3
PCSK9	ENSG00000169174.9	831.83860	1248.22800	-0.58550	2.29010	1.59900	HepG2	UCHL5
PCSK9	ENSG00000169174.9	11004.22970	8596.47460	0.35610	7.15050	6.11490	HepG2	UPF1
PCSK9	ENSG00000169174.9	3736.44260	1934.33550	0.94970	9.15240	7.28790	HepG2	UPF2
PCSK9	ENSG00000169174.9	6191.64350	8299.51400	-0.42270	5.45160	4.65820	HepG2	UTP3
PCSK9	ENSG00000169174.9	5093.32540	1007.40610	2.33790	56.83660	52.94850	HepG2	XPO5
PCSK9	ENSG00000169174.9	460.23140	2136.05740	-2.21450	10.15110	7.83590	HepG2	XRCC5
PCSK9	ENSG00000169174.9	964.53330	2387.88940	-1.30780	5.53970	4.07300	HepG2	XRCC6
PCSK9	ENSG00000169174.9	4297.90550	2080.44540	1.04660	9.89300	8.53990	HepG2	XRN2
PCSK9	ENSG00000169174.9	11435.03140	9454.43550	0.27430	3.39290	2.80470	HepG2	ZNF622
PCSK9	ENSG00000169174.9	3767.24600	2170.25120	0.79550	6.20550	4.15950	HepG2	ZRANB2
PCSK9	ENSG00000169174.9	487.96690	1173.06840	-1.26540	10.74050	8.45180	K562	AARS
PCSK9	ENSG00000169174.9	2868.91270	1532.64240	0.90440	10.26080	9.25830	K562	AGGF1
PCSK9	ENSG00000169174.9	2279.28750	2740.28640	-0.26570	3.21360	1.56700	K562	AKAP1
PCSK9	ENSG00000169174.9	4234.31130	1594.83730	1.40860	17.19210	15.29920	K562	AKAP8L
PCSK9	ENSG00000169174.9	1485.19390	3411.33270	-1.19970	4.07130	2.51600	K562	APOBEC3C
PCSK9	ENSG00000169174.9	1230.51330	2640.70720	-1.10170	4.00290	3.32240	K562	AQR
PCSK9	ENSG00000169174.9	2943.19550	1673.46900	0.81440	13.23390	11.06970	K562	ATP5C1
PCSK9	ENSG00000169174.9	2636.95370	1694.29210	0.63810	4.84990	3.02960	K562	BCCIP
PCSK9	ENSG00000169174.9	397.55860	655.07320	-0.72050	2.98190	2.07470	K562	BOP1
PCSK9	ENSG00000169174.9	887.54890	1480.46840	-0.73820	2.42770	1.44330	K562	CNOT7
PCSK9	ENSG00000169174.9	596.02330	1268.93140	-1.09020	3.81000	1.56830	K562	CPSF7
PCSK9	ENSG00000169174.9	1586.87450	1242.15360	0.35320	4.03280	2.72670	K562	CSTF2
PCSK9	ENSG00000169174.9	2848.59840	4756.35040	-0.73960	3.46640	2.37260	K562	CELF1
PCSK9	ENSG00000169174.9	643.40490	1435.59210	-1.15780	35.91050	32.44860	K562	DDX27
PCSK9	ENSG00000169174.9	3514.97640	2776.64680	0.34010	3.90420	2.63520	K562	DDX3X
PCSK9	ENSG00000169174.9	590.82220	2338.64430	-1.98490	11.83990	10.59410	K562	DDX47
PCSK9	ENSG00000169174.9	539.44630	1084.42000	-1.00740	4.55350	1.82010	K562	DDX55
PCSK9	ENSG00000169174.9	3143.89220	1715.82470	0.87350	5.97020	4.61240	K562	DKC1
PCSK9	ENSG00000169174.9	947.43590	1509.26270	-0.67170	3.05150	1.70340	K562	EEF2
PCSK9	ENSG00000169174.9	859.94480	1458.00060	-0.76170	8.35980	6.69470	K562	EFTUD2
PCSK9	ENSG00000169174.9	581.18420	920.97120	-0.66420	3.99420	1.40720	K562	AGO1
PCSK9	ENSG00000169174.9	714.85990	1533.09780	-1.10070	3.11260	2.35710	K562	EIF2S2
PCSK9	ENSG00000169174.9	177.82260	1207.48210	-2.76350	17.64610	15.22510	K562	EIF3A
PCSK9	ENSG00000169174.9	1029.21530	1560.66610	-0.60060	3.34990	2.20390	K562	EIF3D
PCSK9	ENSG00000169174.9	1782.81370	2900.92910	-0.70240	11.48890	9.78330	K562	EIF4A3
PCSK9	ENSG00000169174.9	707.69050	1295.67300	-0.87250	4.04970	1.60570	K562	EIF4G1
PCSK9	ENSG00000169174.9	2617.20380	3866.43870	-0.56300	2.48700	1.59220	K562	EIF4G2
PCSK9	ENSG00000169174.9	1525.11810	880.72160	0.79210	10.73870	8.25930	K562	EXOSC5
PCSK9	ENSG00000169174.9	260.67840	1115.00700	-2.09670	18.03270	15.01250	K562	FKBP4
PCSK9	ENSG00000169174.9	417.79880	708.76310	-0.76250	5.30580	4.11570	K562	FMR1
PCSK9	ENSG00000169174.9	366.40680	600.79510	-0.71340	2.52960	1.65900	K562	FTO
PCSK9	ENSG00000169174.9	567.81350	828.51440	-0.54510	6.08940	3.99120	K562	FUS
PCSK9	ENSG00000169174.9	1119.53750	3016.84740	-1.43010	68.13300	65.44360	K562	FXR1
PCSK9	ENSG00000169174.9	230.64010	980.74350	-2.08820	14.50800	12.60020	K562	G3BP2
PCSK9	ENSG00000169174.9	1197.31590	1955.58340	-0.70780	4.26140	2.85340	K562	GLRX3
PCSK9	ENSG00000169174.9	4927.46590	2500.42230	0.97860	12.19720	10.17930	K562	HNRNPA1
PCSK9	ENSG00000169174.9	303.30560	1282.63920	-2.08030	23.43000	21.77400	K562	HNRNPC
PCSK9	ENSG00000169174.9	790.84440	1145.80950	-0.53490	3.51820	2.22040	K562	HNRNPF
PCSK9	ENSG00000169174.9	455.83060	1360.87590	-1.57800	6.61160	4.64390	K562	HNRNPK
PCSK9	ENSG00000169174.9	237.76770	666.75720	-1.48760	2.85090	1.90490	K562	HNRNPM
PCSK9	ENSG00000169174.9	448.77320	1098.52320	-1.29150	2.49390	1.73520	K562	HSPD1
PCSK9	ENSG00000169174.9	878.12510	1688.13230	-0.94290	5.42990	2.41900	K562	LARP4
PCSK9	ENSG00000169174.9	692.11480	1243.29540	-0.84510	5.46870	3.41860	K562	LARP7
PCSK9	ENSG00000169174.9	2265.22170	4120.86930	-0.86330	4.05110	2.68450	K562	MSI2
PCSK9	ENSG00000169174.9	1972.08660	2896.72660	-0.55470	9.47370	7.25100	K562	NCBP2
PCSK9	ENSG00000169174.9	2191.29560	4230.09820	-0.94890	5.13920	3.05290	K562	NOL12
PCSK9	ENSG00000169174.9	749.97260	1422.30870	-0.92330	3.06160	1.75560	K562	PABPC1
PCSK9	ENSG00000169174.9	3039.79610	1295.91740	1.22990	9.30460	7.11440	K562	PABPN1
PCSK9	ENSG00000169174.9	638.12120	1274.24630	-0.99770	3.66910	2.54500	K562	PCBP2
PCSK9	ENSG00000169174.9	231.19790	1120.27430	-2.27670	52.62260	49.54810	K562	PCBP3
PCSK9	ENSG00000169174.9	147.79950	859.28830	-2.53950	72.16120	69.04090	K562	POLR2G
PCSK9	ENSG00000169174.9	3880.55810	1540.61600	1.33270	9.69530	6.42340	K562	PPP1R8
PCSK9	ENSG00000169174.9	201.32240	1418.81290	-2.81710	47.46220	44.60140	K562	PRPF8
PCSK9	ENSG00000169174.9	1565.44700	1150.13480	0.44470	3.93640	2.83020	K562	PSIP1
PCSK9	ENSG00000169174.9	346.49480	1391.82620	-2.00610	8.69700	7.56110	K562	PTBP1
PCSK9	ENSG00000169174.9	1965.64190	4218.27810	-1.10170	3.68590	2.74660	K562	PUF60
PCSK9	ENSG00000169174.9	393.07630	935.57270	-1.25100	3.52060	1.88240	K562	RAVER1
PCSK9	ENSG00000169174.9	2264.02600	1541.01530	0.55490	4.63960	3.89160	K562	RBM15
PCSK9	ENSG00000169174.9	1868.42640	1049.90000	0.83150	12.29190	10.18800	K562	RCC2
PCSK9	ENSG00000169174.9	1395.02730	922.99540	0.59580	11.54270	8.65800	K562	RPS10
PCSK9	ENSG00000169174.9	211.57110	1444.92250	-2.77180	49.85170	46.65430	K562	RPS19
PCSK9	ENSG00000169174.9	712.35310	1636.69840	-1.20010	21.05000	18.18870	K562	RPS3
PCSK9	ENSG00000169174.9	210.53430	765.64740	-1.86260	37.59800	34.64240	K562	SAFB
PCSK9	ENSG00000169174.9	353.72260	791.59030	-1.16210	16.65930	13.56270	K562	SDAD1
PCSK9	ENSG00000169174.9	1288.70930	2254.31700	-0.80680	9.64260	8.18940	K562	SF3A3
PCSK9	ENSG00000169174.9	265.58080	632.53400	-1.25200	6.28450	4.78700	K562	SF3B1
PCSK9	ENSG00000169174.9	618.46590	1019.00550	-0.72040	5.60210	4.35900	K562	SF3B4
PCSK9	ENSG00000169174.9	4504.31210	1444.69470	1.64040	14.14850	10.60970	K562	SFPQ
PCSK9	ENSG00000169174.9	615.33330	860.54990	-0.48390	3.38220	1.59990	K562	SND1
PCSK9	ENSG00000169174.9	1902.83770	1289.20700	0.56160	3.02870	1.92010	K562	SRSF5
PCSK9	ENSG00000169174.9	758.73590	978.07750	-0.36640	3.26930	1.61910	K562	SRSF9
PCSK9	ENSG00000169174.9	1336.52840	966.68540	0.46730	6.18480	4.14590	K562	SSB
PCSK9	ENSG00000169174.9	566.01430	1373.18460	-1.27860	16.26010	13.80600	K562	SUPV3L1
PCSK9	ENSG00000169174.9	185.51140	861.88890	-2.21600	60.06220	57.20770	K562	SYNCRIP
PCSK9	ENSG00000169174.9	412.18340	962.64880	-1.22370	3.88430	2.03340	K562	TAF15
PCSK9	ENSG00000169174.9	548.04070	1021.54720	-0.89840	5.37160	3.11470	K562	TBRG4
PCSK9	ENSG00000169174.9	789.00020	1252.06940	-0.66620	7.27910	4.71970	K562	TFIP11
PCSK9	ENSG00000169174.9	2375.05910	1331.95810	0.83430	7.22260	5.80150	K562	TIA1
PCSK9	ENSG00000169174.9	2276.48400	1106.17040	1.04110	17.53650	14.98310	K562	TIAL1
PCSK9	ENSG00000169174.9	1540.06110	1175.77790	0.38930	2.77140	1.82490	K562	TRIM56
PCSK9	ENSG00000169174.9	2255.22510	3175.24480	-0.49360	11.06700	8.54030	K562	TROVE2
PCSK9	ENSG00000169174.9	544.82250	949.76480	-0.80180	2.59710	1.54140	K562	U2AF1
PCSK9	ENSG00000169174.9	649.70620	981.19290	-0.59470	3.66560	2.73780	K562	U2AF2
PCSK9	ENSG00000169174.9	743.86960	1453.61350	-0.96650	12.29510	10.09230	K562	UCHL5
PCSK9	ENSG00000169174.9	1734.61000	2422.07840	-0.48160	5.52050	4.54580	K562	UPF1
PCSK9	ENSG00000169174.9	3629.25050	2654.10980	0.45130	6.19170	3.72970	K562	UPF2
PCSK9	ENSG00000169174.9	2705.41390	1603.61820	0.75440	4.83770	2.95990	K562	UTP18
PCSK9	ENSG00000169174.9	685.78140	2155.31970	-1.65210	34.41420	32.05920	K562	WDR43
PCSK9	ENSG00000169174.9	1147.41800	1965.97900	-0.77690	3.03570	1.36800	K562	XRCC6
PCSK9	ENSG00000169174.9	4583.21390	2974.03240	0.62380	4.32150	3.20540	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PCSK9 is not available on ENCORE database.

14 RBPs can affect the splicing of PCSK9 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PCSK9	ENSG00000169174.9	chr1	+	55512195	55512319			55505220	55505717	55517950	55518084	-0.11100	0.00003	0.02055	excluded	K562	XRN2
SE	PCSK9	ENSG00000169174.9	chr1	+	55509515	55509707			55505220	55505717	55517950	55518084	-0.34900	0.00003	0.00629	excluded	K562	XRCC6
SE	PCSK9	ENSG00000169174.9	chr1	+	55512195	55512319			55505430	55505717	55517950	55518084	-0.13500	0.00000	0.00054	excluded	K562	HNRNPL
SE	PCSK9	ENSG00000169174.9	chr1	+	55509515	55509707			55505430	55505717	55517950	55518084	-0.11500	0.00018	0.00608	excluded	HepG2	SRSF1
SE	PCSK9	ENSG00000169174.9	chr1	+	55509515	55509707			55505220	55505717	55517950	55518084	-0.29000	0.00499	0.06924	excluded	K562	HNRNPC
MXE	PCSK9	ENSG00000169174.9	chr1	+	55509515	55509707	55512195	55512319	55505220	55505717	55517950	55518084	0.11000	0.00147	0.03950	1included	HepG2	MATR3
MXE	PCSK9	ENSG00000169174.9	chr1	+	55524171	55524320	55525158	55525336	55523708	55523882	55527047	55527229	-0.14800	0.00026	0.01315	2included	HepG2	PTBP1
MXE	PCSK9	ENSG00000169174.9	chr1	+	55509515	55509707	55512195	55512319	55505220	55505717	55517950	55518084	0.10900	0.00117	0.08151	1included	K562	NONO
MXE	PCSK9	ENSG00000169174.9	chr1	+	55509515	55509707	55512195	55512319	55505220	55505717	55517950	55518084	0.11300	0.00028	0.05920	1included	HepG2	IGF2BP1
MXE	PCSK9	ENSG00000169174.9	chr1	+	55509515	55509707	55512195	55512319	55505220	55505717	55517950	55518084	0.13300	0.00000	0.00000	1included	HepG2	NOLC1
MXE	PCSK9	ENSG00000169174.9	chr1	+	55509515	55509707	55512195	55512319	55505220	55505717	55517950	55518084	0.13500	0.00000	0.00000	1included	HepG2	NOL12
MXE	PCSK9	ENSG00000169174.9	chr1	+	55509515	55509707	55512195	55512319	55505220	55505717	55517950	55518084	0.08600	0.00125	0.04163	1included	HepG2	HNRNPC
MXE	PCSK9	ENSG00000169174.9	chr1	+	55509515	55509707	55512195	55512319	55505220	55505717	55517950	55518084	0.11500	0.00080	0.04515	1included	HepG2	DDX3X
MXE	PCSK9	ENSG00000169174.9	chr1	+	55509515	55509707	55512195	55512319	55505220	55505717	55517950	55518084	0.14500	0.00000	0.00000	1included	HepG2	HNRNPL
MXE	PCSK9	ENSG00000169174.9	chr1	+	55509515	55509707	55512195	55512319	55505220	55505717	55517950	55518084	0.14400	0.00010	0.00575	1included	HepG2	NCBP2
MXE	PCSK9	ENSG00000169174.9	chr1	+	55509515	55509707	55512195	55512319	55505220	55505717	55517950	55518084	0.11600	0.00130	0.06289	1included	HepG2	DDX6

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PCSK9

General Information

Functions

Localization

Domains (AlphaFold: PCSK9)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PCSK9 is not avaliable on ENCORE database.

37 proteins are bound to PCSK9 RNA:

eCLIP assay for PCSK9 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PCSK9 is not available on ENCORE database.

186 RBPs can affect the gene expression of PCSK9 :

The Knockdown/knockout RNA-Seq assay for PCSK9 is not available on ENCORE database.

14 RBPs can affect the splicing of PCSK9 :

The Knockdown/knockout RNA-Seq assay for PCSK9 is not avaliable on ENCORE database.