SNRPA

General Information

Gene Name       : SNRPA
Gene ID             : ENSG00000077312.8
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: SNRPA)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SNRPAENSG00000077312.8103.24112.82108.03ENCSR000AEF
HepG2SNRPAENSG00000077312.8207.34130.60168.97ENCSR985KAT
K562SNRPAENSG00000077312.8148.01176.26162.13ENCSR000AEO

Assays

1 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
RNA Bind-n-SeqRBNS: SNRPAENCSR167ZZBSNRPAcell-free sampleReleasedENCSR335RUM  






  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
SNRPA293TshRNASNRPA-BG293LV02-45,SNRPA-BG293LV02-46NT-BG293LV02-1,NT-BG293LV02-2,RevokedENCORE2
SNRPA293TshRNASNRPA-BG293LV06-109B,SNRPA-BG293LV06-110BNT-BG293LV06-1B,NT-BG293LV06-2B,SequencedENCORE2


  RNA Bind-n-Seqn  
  GeneName    gene_aliases    Status    Project    Note  
SNRPASNRPAReleasedENCODE3


  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SNRPA is not avaliable on ENCORE database.


  • The binding motifs of SNRPA

    • Trulli

Proteins bound to RNA
  • SNRPA RNA is bound by 26 proteins.  







eCLIP assay for SNRPA is not avaliable on ENCORE database.





26 proteins are bound to SNRPA RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr194126544741265516+3'-UTR,CDS,intron-Proximal3.9572612.41117K562UCHL5
chr194127116641271210+3'-UTR6.5491586.16054K562AATF
chr194126544341265513+3'-UTR,CDS4.071816.39499HepG2GRWD1
chr194126535841265447+3'-UTR,CDS3.3241014.22579K562UCHL5
chr194127107841271182+3'-UTR3.335103.47356HepG2HNRNPK
chr194126537041265444+3'-UTR,CDS3.406518.54450HepG2PPIG
chr194127121041271260+3'-UTR6.9701674.98535K562AATF
chr194126533441265461+3'-UTR,CDS,intron-Proximal3.989038.71373HepG2PABPN1
chr194127106441271214+3'-UTR,CDS4.139208.16642HepG2PCBP1
chr194127107841271170+3'-UTR3.2677910.40598K562DDX55
chr194126538841265429+3'-UTR,CDS3.687585.17150K562RPS3
chr194127111841271215+3'-UTR3.432154.10159HepG2PCBP2
chr194126544441265513+3'-UTR,CDS3.4765811.11819HepG2PPIG
chr194127107141271211+3'-UTR6.1642379.85350K562PCBP1
chr194126546041265512+3'-UTR,CDS3.212624.73359K562PUM1
chr194126535141265412+3'-UTR,CDS3.4541618.89408K562ZNF622
chr194127118141271262+3'-UTR3.4807424.23977K562GEMIN5
chr194127112041271157+3'-UTR3.286357.27839K562PABPC4
chr194126548041265514+3'-UTR,CDS3.297369.94218K562ZNF622
chr194127111041271149+3'-UTR3.508846.11374K562AATF
chr194127116741271246+3'-UTR4.1950313.33740HepG2LARP4
chr194127115441271252+3'-UTR3.100236.73981K562LARP4
chr194126541241265452+3'-UTR,CDS4.3845518.52359K562ZNF622
chr194126533341265461+3'-UTR,CDS,intron-Proximal3.321796.50573K562ZNF800
chr194127107041271120+3'-UTR3.349164.54958K562PABPC4
chr194127106941271148+3'-UTR3.5686913.06346K562RBM15
chr194126547741265557+3'-UTR,CDS,intron-Proximal5.8530111.93944HepG2AQR
chr194127106841271118+3'-UTR,CDS4.459294.25479HepG2PCBP2
chr194127116441271252+3'-UTR3.069936.34575K562METAP2
chr194126546141265559+3'-UTR,CDS,intron-Proximal3.7617713.55747HepG2PRPF8
chr194127106441271167+3'-UTR,CDS4.6111717.94219HepG2LARP4
chr194126539441265450+3'-UTR,CDS3.560765.62957HepG2BUD13
chr194126545241265480+3'-UTR,CDS3.7985213.88951K562ZNF622
chr194125699841257051+5'-UTR,intron-Distal3.594885.13030K562RBM15
chr194125720841257241+5'-UTR,intron-Distal,intron-Proximal3.536354.80676K562RBM15
chr194125717341257212+5'-UTR,intron-Distal,intron-Proximal4.782006.97460K562PCBP1
chr194126323641263344+5'-UTR,CDS,intron-Proximal3.314588.00708HepG2PPIG
chr194125728241257370+5'-UTR,CDS,intron-Distal,intron-Proximal3.191366.66900HepG2GRWD1
chr194126880441268845+CDS,intron-Proximal3.975806.20417HepG2BUD13
chr194126888441268932+CDS4.683477.56132K562RPS3
chr194126548541265502+CDS4.344433.95763K562RPS3
chr194127097041271048+CDS3.829718.30886K562METAP2
chr194126957741269608+CDS,intron-Proximal4.234827.30031K562AQR
chr194126877441268829+CDS,intron-Proximal3.698955.23469HepG2AQR
chr194127091641271026+CDS3.8731712.23532HepG2PPIG
chr194126957641269629+CDS,intron-Proximal4.419859.97647HepG2PRPF8
chr194126906741269203+intron-Distal,intron-Proximal4.009929.59600K562AQR
chr194126340941263450+intron-Distal,intron-Proximal5.038675.65342K562AQR
chr194125740341257451+intron-Distal,intron-Proximal3.648514.54206HepG2PRPF8
chr194127009841270207+intron-Distal4.300354.36329HepG2PRPF4
chr194126912541269256+intron-Distal3.511273.51708K562RBFOX2
chr194127012941270215+intron-Distal3.143423.72797K562GTF2F1
chr194126906241269183+intron-Distal,intron-Proximal4.174778.58430K562EFTUD2
chr194126911541269204+intron-Distal3.704627.15495HepG2RBFOX2
chr194126287441262929+intron-Distal4.322904.07596K562GTF2F1
chr194126911641269232+intron-Distal4.1804611.34970K562PRPF8
chr194126909041269209+intron-Distal6.5475717.05446HepG2EFTUD2
chr194126960841269623+intron-Proximal3.842337.64728K562AQR
chr194126897941269021+intron-Proximal4.417244.62947HepG2AQR
chr194126874741268803+intron-Proximal3.980333.31322HepG2SF3B4
chr194126341341263441+intron-Proximal4.733474.35676HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SNRPA is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SNRPA is not available on ENCORE database.

  • 152 RBPs can affect the levels of SNRPA.  








The Knockdown/knockout RNA-Seq assay for SNRPA is not available on ENCORE database.





152 RBPs can affect the gene expression of SNRPA :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SNRPAENSG00000077312.41643.167102092.44230-0.348702.449801.56310HepG2ABCF1
SNRPAENSG00000077312.4843.914801066.33540-0.337503.954303.25160HepG2ACO1
SNRPAENSG00000077312.4774.160901081.07710-0.481803.171802.60690HepG2AKAP1
SNRPAENSG00000077312.4840.605301191.46490-0.503204.022402.77190HepG2AKAP8
SNRPAENSG00000077312.4711.644501071.40500-0.590308.045906.82330HepG2AKAP8L
SNRPAENSG00000077312.4598.38580894.46130-0.579904.772303.75280HepG2ASCC1
SNRPAENSG00000077312.41331.496801888.22630-0.504005.534703.62430HepG2ATP5C1
SNRPAENSG00000077312.4877.979001694.62200-0.9487015.5914014.19470HepG2AUH
SNRPAENSG00000077312.4380.45920839.00650-1.1409011.309009.65420HepG2BCLAF1
SNRPAENSG00000077312.4647.611601776.77270-1.4561035.9592034.23130HepG2BOP1
SNRPAENSG00000077312.41228.249901567.70410-0.352003.179901.86300HepG2BUD13
SNRPAENSG00000077312.4578.576201438.82300-1.3143032.9401030.88850HepG2CALR
SNRPAENSG00000077312.4660.098201066.17540-0.6917014.2405012.97690HepG2CKAP4
SNRPAENSG00000077312.4468.03610838.96600-0.842004.649903.65440HepG2CNOT7
SNRPAENSG00000077312.4732.595701631.14560-1.1548021.3984019.71500HepG2CPSF6
SNRPAENSG00000077312.4500.97520762.10650-0.605303.811902.12490HepG2CSTF2T
SNRPAENSG00000077312.4932.908601446.18600-0.632407.410806.45400HepG2CELF1
SNRPAENSG00000077312.41197.278401554.76950-0.376904.771903.83870HepG2DAZAP1
SNRPAENSG00000077312.4427.39840820.67880-0.9412012.4700011.15240HepG2DDX21
SNRPAENSG00000077312.4479.67410803.40540-0.744108.869707.25810HepG2DDX24
SNRPAENSG00000077312.4668.08930888.31070-0.411002.616301.36260HepG2DDX27
SNRPAENSG00000077312.4525.16150719.09400-0.453403.285501.76520HepG2DDX28
SNRPAENSG00000077312.4395.144901035.50580-1.3899022.1012020.51400HepG2DDX3X
SNRPAENSG00000077312.4559.14110949.57150-0.764105.482704.43940HepG2DDX55
SNRPAENSG00000077312.4743.687501852.29510-1.3165012.6486010.65620HepG2DDX59
SNRPAENSG00000077312.41102.603801730.83820-0.650604.869403.55280HepG2DDX5
SNRPAENSG00000077312.4585.59130889.71920-0.603504.376103.61340HepG2DDX6
SNRPAENSG00000077312.4666.94920926.96010-0.474904.157502.96890HepG2DHX30
SNRPAENSG00000077312.4710.131801020.21250-0.522707.212506.21600HepG2DKC1
SNRPAENSG00000077312.4605.94390961.06760-0.665506.035005.02870HepG2DNAJC21
SNRPAENSG00000077312.4786.67750952.62830-0.276102.905802.24000HepG2DNAJC2
SNRPAENSG00000077312.4369.17800755.98490-1.0340010.203308.19950HepG2AGO1
SNRPAENSG00000077312.4459.13500855.11190-0.897209.498808.43900HepG2EIF2S1
SNRPAENSG00000077312.4616.27310914.09180-0.568804.366703.24970HepG2EIF3D
SNRPAENSG00000077312.4566.28290944.90390-0.738606.630305.63880HepG2EIF4A3
SNRPAENSG00000077312.41214.069201534.07840-0.337503.334502.43080HepG2EIF4G1
SNRPAENSG00000077312.41047.152201469.51250-0.488904.466403.44730HepG2EIF4G2
SNRPAENSG00000077312.4981.527401945.80380-0.9873017.5673016.26610HepG2ETF1
SNRPAENSG00000077312.4549.22800782.23950-0.510204.520903.10810HepG2FASTKD2
SNRPAENSG00000077312.41420.932102112.86360-0.572404.959003.95620HepG2FIP1L1
SNRPAENSG00000077312.4448.21780790.29470-0.818207.269305.35090HepG2FKBP4
SNRPAENSG00000077312.41022.632501634.00090-0.676102.707401.70190HepG2FTO
SNRPAENSG00000077312.41193.54090864.543000.465103.260702.41170HepG2FUBP3
SNRPAENSG00000077312.41341.34210953.656500.492004.099603.26890HepG2FXR1
SNRPAENSG00000077312.4647.30270884.50470-0.450402.979902.29060HepG2G3BP1
SNRPAENSG00000077312.4610.36920848.67300-0.475503.382202.25090HepG2GNB2L1
SNRPAENSG00000077312.4882.721201848.95220-1.0667016.0719014.65060HepG2GPKOW
SNRPAENSG00000077312.4776.377601018.08850-0.391004.791903.54030HepG2HDGF
SNRPAENSG00000077312.4522.40030939.59970-0.846905.459003.45430HepG2HLTF
SNRPAENSG00000077312.4649.02890970.27540-0.580105.652204.77210HepG2HNRNPA1
SNRPAENSG00000077312.4848.407401428.99130-0.7522015.3561013.51680HepG2HNRNPA2B1
SNRPAENSG00000077312.4694.744701079.26770-0.635506.823305.77220HepG2HNRNPC
SNRPAENSG00000077312.41334.108001550.84300-0.217202.272101.61770HepG2HNRNPF
SNRPAENSG00000077312.41281.74900895.995000.516504.803803.90460HepG2HNRNPK
SNRPAENSG00000077312.4785.531201764.49630-1.1675021.3111019.82250HepG2HNRNPLL
SNRPAENSG00000077312.4669.897901072.13110-0.6785012.5755011.36100HepG2HNRNPU
SNRPAENSG00000077312.41138.706701527.13060-0.423405.074904.12240HepG2IGF2BP1
SNRPAENSG00000077312.4473.41420899.02580-0.9253010.670609.43840HepG2IGF2BP2
SNRPAENSG00000077312.4559.39780751.16400-0.425303.151201.39240HepG2CCAR2
SNRPAENSG00000077312.41391.240802273.60910-0.708606.803505.48590HepG2LARP4
SNRPAENSG00000077312.4678.66660959.28330-0.499303.386502.69520HepG2MATR3
SNRPAENSG00000077312.4595.52350956.61550-0.683804.256102.96450HepG2METAP2
SNRPAENSG00000077312.41132.231301710.00960-0.594808.085006.76810HepG2MSI2
SNRPAENSG00000077312.4927.615101799.72820-0.956208.862007.10260HepG2MTPAP
SNRPAENSG00000077312.4527.09480981.84170-0.897409.857808.70560HepG2NCBP2
SNRPAENSG00000077312.4552.81570751.83430-0.443603.354801.79970HepG2NIP7
SNRPAENSG00000077312.41221.849101541.71880-0.335503.238202.41570HepG2NOL12
SNRPAENSG00000077312.41159.549901564.62030-0.432203.919903.03430HepG2NSUN2
SNRPAENSG00000077312.4505.93300874.21900-0.789007.868706.66660HepG2PABPC4
SNRPAENSG00000077312.4496.73450927.25360-0.900507.320405.70750HepG2PCBP2
SNRPAENSG00000077312.4353.82640732.15600-1.0491010.557509.11210HepG2PRPF8
SNRPAENSG00000077312.4684.50940893.29080-0.384103.613603.00650HepG2PTBP1
SNRPAENSG00000077312.4726.138901471.77080-1.0192018.9365017.56290HepG2PUF60
SNRPAENSG00000077312.41167.565501562.42610-0.420304.271903.56880HepG2PUM1
SNRPAENSG00000077312.41287.783601561.23730-0.277802.196001.59570HepG2PUM2
SNRPAENSG00000077312.4794.053401086.14220-0.451906.550805.67370HepG2PUS1
SNRPAENSG00000077312.4675.53650967.34780-0.518005.592404.75040HepG2QKI
SNRPAENSG00000077312.4501.87260894.64720-0.834005.043304.10540HepG2RAVER1
SNRPAENSG00000077312.41601.085201920.22170-0.262202.302201.51180HepG2RBM15
SNRPAENSG00000077312.4724.890001626.30040-1.1658025.0046023.76060HepG2RBM22
SNRPAENSG00000077312.4652.30150877.97120-0.428603.485202.73520HepG2RBM25
SNRPAENSG00000077312.41103.17210925.950000.252602.345201.77160HepG2RECQL
SNRPAENSG00000077312.4489.585501670.74310-1.7709050.8214048.79430HepG2RPLP0
SNRPAENSG00000077312.4398.37430879.13390-1.1420010.496608.78920HepG2RPS10
SNRPAENSG00000077312.4540.07860889.54360-0.719908.977907.94580HepG2RPS19
SNRPAENSG00000077312.4460.20410924.70890-1.0067013.6097011.93290HepG2RPS2
SNRPAENSG00000077312.4359.74140843.03880-1.228608.237606.88000HepG2RPS3A
SNRPAENSG00000077312.4740.55130943.94480-0.350102.380201.38880HepG2RPS5
SNRPAENSG00000077312.4360.89920724.21830-1.0048010.803609.40490HepG2RRP9
SNRPAENSG00000077312.4612.77860973.74930-0.668204.113202.22830HepG2RTF1
SNRPAENSG00000077312.4634.83560892.65010-0.491704.110802.96940HepG2SERBP1
SNRPAENSG00000077312.41420.92830709.363001.002103.150701.68020HepG2SF1
SNRPAENSG00000077312.41051.577001746.45750-0.7319010.338409.05420HepG2SF3B1
SNRPAENSG00000077312.4782.15730929.94000-0.249701.868001.36580HepG2SF3B4
SNRPAENSG00000077312.41061.219101411.35560-0.411405.568704.63150HepG2SLBP
SNRPAENSG00000077312.4955.458401113.40860-0.220702.124601.54950HepG2SMN1
SNRPAENSG00000077312.4588.459201943.25640-1.7235025.2635023.00460HepG2SNRNP70
SNRPAENSG00000077312.41197.658101836.79080-0.617006.134305.46910HepG2SRFBP1
SNRPAENSG00000077312.4811.101101453.25090-0.8413019.8611018.38970HepG2SRSF5
SNRPAENSG00000077312.4995.890201523.67630-0.6135012.7998011.49100HepG2SRSF7
SNRPAENSG00000077312.4440.72440789.74260-0.8415014.6936013.60220HepG2SRSF9
SNRPAENSG00000077312.4993.850401594.67220-0.6822011.9552011.03550HepG2SSB
SNRPAENSG00000077312.4493.28220836.11670-0.761304.907603.29590HepG2SUB1
SNRPAENSG00000077312.41279.950501652.66820-0.368705.375504.56020HepG2SUCLG1
SNRPAENSG00000077312.4906.090801426.70320-0.655008.982007.36910HepG2SUPT6H
SNRPAENSG00000077312.4393.80720945.17890-1.2631012.6993011.42780HepG2SUPV3L1
SNRPAENSG00000077312.4736.822401720.04530-1.2231025.1618023.40230HepG2TARDBP
SNRPAENSG00000077312.4324.77180633.45640-0.963809.514807.88880HepG2TFIP11
SNRPAENSG00000077312.4514.261301041.71680-1.0184019.1995018.10020HepG2TIAL1
SNRPAENSG00000077312.4853.049201051.09220-0.301203.055102.46950HepG2TRIM56
SNRPAENSG00000077312.41055.003001437.98250-0.446804.499903.35300HepG2TUFM
SNRPAENSG00000077312.41082.865701807.41510-0.739109.907708.70510HepG2U2AF1
SNRPAENSG00000077312.4777.212301522.16390-0.9697011.669609.90810HepG2UBE2L3
SNRPAENSG00000077312.4438.38090558.27460-0.348802.120701.45680HepG2UCHL5
SNRPAENSG00000077312.4976.276801477.23050-0.5975012.3310011.05010HepG2UPF1
SNRPAENSG00000077312.41135.386001518.40070-0.419405.822004.35470HepG2UTP18
SNRPAENSG00000077312.4461.26860755.14470-0.711103.394402.17160HepG2XPO5
SNRPAENSG00000077312.4615.12280880.05490-0.516702.820801.54460HepG2XRCC5
SNRPAENSG00000077312.41210.816401771.11360-0.548708.803407.71850HepG2ZC3H8
SNRPAENSG00000077312.4743.711101624.67350-1.1273046.1417044.61210HepG2ZNF622
SNRPAENSG00000077312.43550.078805186.79340-0.547007.286505.33110K562ABCF1
SNRPAENSG00000077312.47712.359405571.155500.4691010.274009.27010K562AGGF1
SNRPAENSG00000077312.47246.123205797.099900.321802.307401.70950K562AKAP8L
SNRPAENSG00000077312.44345.315005592.12810-0.363904.603802.94080K562APOBEC3C
SNRPAENSG00000077312.41918.134803572.82440-0.8974012.2622010.38310K562BOP1
SNRPAENSG00000077312.42480.186603613.10460-0.542805.674503.57520K562BUD13
SNRPAENSG00000077312.42271.928803798.98790-0.7417016.2660014.33040K562CPSF6
SNRPAENSG00000077312.45480.917707793.89340-0.507905.490104.11230K562CELF1
SNRPAENSG00000077312.43247.393304004.32860-0.302303.647302.25650K562DDX21
SNRPAENSG00000077312.43911.123606448.71800-0.7214027.7260025.87110K562DDX47
SNRPAENSG00000077312.48245.969206237.718300.402608.756607.03200K562DKC1
SNRPAENSG00000077312.41556.918002153.11960-0.467704.892403.66270K562EFTUD2
SNRPAENSG00000077312.42504.377703420.09910-0.449608.866307.69040K562EIF2S2
SNRPAENSG00000077312.41648.192902305.07030-0.483903.920502.66350K562EIF3D
SNRPAENSG00000077312.44367.641806337.73880-0.5371014.9849012.90580K562EIF4G2
SNRPAENSG00000077312.42570.937303965.11620-0.625105.642403.25440K562ESF1
SNRPAENSG00000077312.42662.240802098.450700.343204.519002.80030K562EWSR1
SNRPAENSG00000077312.42122.100803306.22910-0.639707.844305.79140K562FKBP4
SNRPAENSG00000077312.41949.235803865.28240-0.9877021.0162018.59430K562FMR1
SNRPAENSG00000077312.41779.417403276.13310-0.8806013.9530011.76470K562FTO
SNRPAENSG00000077312.41956.508102500.04050-0.353705.071504.28670K562FXR1
SNRPAENSG00000077312.4797.071501631.78960-1.0337012.2407010.53540K562G3BP2
SNRPAENSG00000077312.41494.311102158.67410-0.530705.443103.43770K562GEMIN5
SNRPAENSG00000077312.41918.667403627.13890-0.9187020.4480018.16270K562GPKOW
SNRPAENSG00000077312.42922.541504557.29400-0.6410012.1718010.56400K562GRSF1
SNRPAENSG00000077312.42977.174903772.01630-0.341403.887702.61710K562HNRNPA1
SNRPAENSG00000077312.41566.628103806.82900-1.2809041.8457039.61970K562HNRNPC
SNRPAENSG00000077312.43256.087004177.46730-0.359504.343903.21300K562HNRNPU
SNRPAENSG00000077312.43996.949605055.21020-0.338903.198202.34660K562HSPD1
SNRPAENSG00000077312.42913.510902146.039100.441003.390102.21010K562IGF2BP2
SNRPAENSG00000077312.41567.758703097.01850-0.9822012.6440010.52520K562KRR1
SNRPAENSG00000077312.47451.352105889.111600.339403.834902.49930K562MAK16
SNRPAENSG00000077312.48495.845106891.780100.301803.559902.50970K562MBNL1
SNRPAENSG00000077312.41936.784103540.47530-0.8703019.2392016.86360K562METAP2
SNRPAENSG00000077312.44553.852206755.20890-0.568908.960506.99570K562MSI2
SNRPAENSG00000077312.43612.569504657.66020-0.366608.493207.14990K562MTPAP
SNRPAENSG00000077312.47300.149604830.657200.595605.691604.26690K562NAA15
SNRPAENSG00000077312.44171.508105175.03870-0.311009.696608.41370K562NSUN2
SNRPAENSG00000077312.46953.142103435.030001.017205.327103.82510K562PABPN1
SNRPAENSG00000077312.41403.422602005.31190-0.514904.420203.17580K562PCBP2
SNRPAENSG00000077312.42351.272404943.39250-1.0721020.4516018.27770K562PCBP3
SNRPAENSG00000077312.41712.982503791.64020-1.1463038.1727035.59980K562POLR2G
SNRPAENSG00000077312.41702.628602095.24010-0.299402.235601.55770K562PRPF8
SNRPAENSG00000077312.43865.477606914.79790-0.8390018.9412016.73750K562PUF60
SNRPAENSG00000077312.45256.507707356.06100-0.4848010.079507.98320K562PUM1
SNRPAENSG00000077312.45079.144607206.37230-0.5047013.3801011.28060K562PUM2
SNRPAENSG00000077312.47148.141805748.703500.314201.811501.35370K562PUS1
SNRPAENSG00000077312.47548.953905601.600900.430308.836907.80430K562RBM15
SNRPAENSG00000077312.41170.807502134.04300-0.8661011.636109.93750K562RPS19
SNRPAENSG00000077312.42718.212803493.12220-0.361903.441401.80720K562SDAD1
SNRPAENSG00000077312.43258.959805106.50210-0.6479018.9724016.99200K562SF3A3
SNRPAENSG00000077312.41755.969903449.39090-0.9741015.4053013.05210K562SF3B1
SNRPAENSG00000077312.46086.620003608.135500.754302.852701.60130K562SNRNP200
SNRPAENSG00000077312.43613.193702952.577400.291202.541701.57050K562SRFBP1
SNRPAENSG00000077312.44295.677905231.72710-0.284406.477905.11650K562SRPK2
SNRPAENSG00000077312.43864.200604892.15440-0.340303.127201.66920K562SSRP1
SNRPAENSG00000077312.43332.400604474.30660-0.425102.524401.33290K562STAU1
SNRPAENSG00000077312.41242.561902028.29690-0.707008.203206.40920K562SUPV3L1
SNRPAENSG00000077312.42657.488102095.922100.342403.475202.54310K562TIA1
SNRPAENSG00000077312.42383.070203282.98390-0.462204.069802.91790K562TIAL1
SNRPAENSG00000077312.43487.543304360.80830-0.322402.714101.34770K562TRIP6
SNRPAENSG00000077312.41299.437901633.07260-0.329703.346102.46520K562U2AF2
SNRPAENSG00000077312.46164.447807797.18910-0.339004.545002.75340K562UBE2L3
SNRPAENSG00000077312.41424.319602146.87680-0.592006.902505.21230K562UCHL5
SNRPAENSG00000077312.43597.202305487.20650-0.6092021.9963020.21290K562UPF1
SNRPAENSG00000077312.43228.640905144.26730-0.672008.098306.13300K562UTP3
SNRPAENSG00000077312.43679.302504695.22410-0.351804.249803.15560K562WDR3
SNRPAENSG00000077312.43519.434904882.52380-0.4723014.6057012.86070K562WDR43
SNRPAENSG00000077312.41706.156302186.39570-0.357802.940801.68380K562XRN2
SNRPAENSG00000077312.43313.825804271.43680-0.366203.901302.84500K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SNRPA is not available on ENCORE database.





3 RBPs can affect the splicing of SNRPA :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSSNRPAENSG00000077312.4chr19+4126321441263409412632714126340941256779412573860.539000.000380.00294longerK562AQR
MXESNRPAENSG00000077312.4chr19+41257291412573864126323641263409412567754125688241265335412655150.061000.000070.002061includedK562SRSF1
MXESNRPAENSG00000077312.4chr19+41257291412573864126323641263409412567754125688241265335412655150.057000.000040.012331includedK562GEMIN5

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SNRPA is not avaliable on ENCORE database.