SF3B3

General Information

Gene Name       : SF3B3
Gene ID             : ENSG00000189091.12
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: SF3B3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SF3B3ENSG00000189091.12228.65237.45233.05ENCSR000AEF
HepG2SF3B3ENSG00000189091.12297.42310.30303.86ENCSR985KAT
K562SF3B3ENSG00000189091.12252.45289.21270.83ENCSR000AEO

Assays

1 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
knockdown followed by RNA-seq SF3B3-BGKcLV33-K562ENCSR034FLWSF3B3K562ReleasedENCSR271ZAB   CRISPRKD% = no band on the position,






  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
SF3B3ENCAB290RUFA302-508A1BGHcLV34-49, Released, ENCODE4BGKcLV33-53, Released, ENCODE4


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
SF3B3K562CRISPRBGKcLV33-47,BGKcLV33-48BGKcLV33-1,BGKcLV33-20.0,0.0NotSatisfiedENCODE4
SF3B3K562CRISPRENCSR034FLWENCSR271ZABSF3B3-BGKcLV33-53,SF3B3-BGKcLV33-54NT-BGKcLV33-1,NT-BGKcLV33-2no band on the position,ReleasedENCODE4
SF3B3HepG2CRISPRBGHcLV31-49,BGHcLV31-50BGHcLV31-1,BGHcLV31-220.1,9.6NotSatisfiedENCODE4
SF3B3HepG2CRISPRSF3B3-BGHcLV34-49,SF3B3-BGHcLV34-50NT-BGHcLV34-1,NT-BGHcLV34-273.2,75.7SubmittingENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
SF3B3Product_ID: A302-508A
Lot_ID: 1
Source: Bethyl Labs
Target Name: SF3B3-human		 SF3B3-HEPG2-CRISPR-A302-508A.png<br>Caption: Western blot following CRISPR against SF3B3 in HepG2 whole cell lysate using SF3B3 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against SF3B3. SF3B3 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.
 SF3B3-K562-CRISPR-A302-508A.png<br>Caption: Western blot following CRISPR against SF3B3 in K562 whole cell lysate using SF3B3 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against SF3B3. SF3B3 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.








RNA Targets

  • eCLIP assay for SF3B3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SF3B3 RNA is bound by 63 proteins.  







eCLIP assay for SF3B3 is not avaliable on ENCORE database.





63 proteins are bound to SF3B3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr167056289270562952+3'-UTR,CDS3.984315.37099K562FXR2
chr167058841270588486+3'-UTR,CDS3.2991715.54200HepG2GRWD1
chr167056276570562813+3'-UTR,CDS,intron-Proximal3.150994.50819HepG2AQR
chr167060606970606130+3'-UTR5.1589415.76809HepG2SUB1
chr167056048170560540+3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.659954.40430HepG2AQR
chr167060606570606174+3'-UTR3.4639413.08398HepG2LARP4
chr167060592470606015+3'-UTR4.007787.53682K562PCBP1
chr167058903270589057+3'-UTR,CDS3.801196.08151K562BUD13
chr167058905970589108+3'-UTR,CDS3.672808.55049K562DDX24
chr167058835870588471+3'-UTR,CDS3.3106210.19930K562DDX24
chr167058836570588485+3'-UTR,CDS3.0051910.17295HepG2G3BP1
chr167056047070560553+3'-UTR,5'-UTR,intron-Distal,intron-Proximal5.1778912.70303K562AQR
chr167058896370589017+3'-UTR,CDS3.228428.41398HepG2G3BP1
chr167058843770588500+3'-UTR,CDS4.379354.13050K562LIN28B
chr167058453670584609+3'-UTR,CDS,intron-Distal,intron-Proximal4.2898310.46991K562EFTUD2
chr167058448570584593+3'-UTR,CDS,intron-Distal,intron-Proximal5.1043920.66358K562SF3B4
chr167058902870589087+3'-UTR,CDS3.314886.30955HepG2GRWD1
chr167058454370584617+3'-UTR,CDS,intron-Distal,intron-Proximal4.420408.17589HepG2PRPF8
chr167056281170562881+3'-UTR,CDS3.2333511.40684HepG2GRWD1
chr167058453370584590+3'-UTR,CDS,intron-Distal,intron-Proximal3.3702211.42117HepG2U2AF2
chr167058453970584595+3'-UTR,CDS,intron-Distal,intron-Proximal3.888403.88088K562U2AF2
chr167060606370606130+3'-UTR4.3787168.48970K562PUM2
chr167058830270588389+3'-UTR,CDS,intron-Proximal4.3262014.00334K562SF3B4
chr167058901970589086+3'-UTR,CDS4.634316.32827HepG2FXR2
chr167059006070590106+3'-UTR,CDS,intron-Proximal4.009204.39974K562GPKOW
chr167060799970608053+3'-UTR6.0436619.55075K562LIN28B
chr167060575570605797+3'-UTR7.1059081.79811HepG2SUB1
chr167058894170588990+3'-UTR,CDS,intron-Proximal3.594595.37652K562BUD13
chr167059008070590120+3'-UTR,CDS,intron-Proximal3.216966.78893HepG2GRWD1
chr167060569670605796+3'-UTR,CDS3.9507711.92412K562PCBP1
chr167060583170605876+3'-UTR4.5633911.33735HepG2SUB1
chr167060574970605751+3'-UTR4.218445.94530HepG2SUB1
chr167058843070588477+3'-UTR,CDS4.253879.06546K562FMR1
chr167058895970589025+3'-UTR,CDS4.058873.45590K562GRWD1
chr167059009770590148+3'-UTR,CDS5.004635.24786K562FXR2
chr167058900870589111+3'-UTR,CDS,intron-Proximal3.008524.30999K562ZNF800
chr167060579770605817+3'-UTR6.4496129.54317HepG2SUB1
chr167058452870584601+3'-UTR,CDS,intron-Distal,intron-Proximal3.165928.78144HepG2EFTUD2
chr167060801670608045+3'-UTR5.149568.14675HepG2LIN28B
chr167059004070590151+3'-UTR,CDS,intron-Proximal3.185847.83986K562SF3B4
chr167056048970560566+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.504814.19369HepG2DDX3X
chr167058454370584588+3'-UTR,CDS,intron-Distal,intron-Proximal4.219648.54394K562BUD13
chr167058840170588493+3'-UTR,CDS3.350454.43617K562FXR1
chr167058836670588498+3'-UTR,CDS3.0290320.67801HepG2PPIG
chr167060608670606171+3'-UTR3.292179.54268K562PABPC4
chr167060800070608016+3'-UTR4.992406.97108HepG2LIN28B
chr167056277270562857+3'-UTR,CDS,intron-Proximal3.911014.22460K562RBM15
chr167060590370605962+3'-UTR3.087614.19328HepG2PCBP2
chr167058897670589114+3'-UTR,CDS,intron-Proximal3.9199518.60706K562UCHL5
chr167058841670588485+3'-UTR,CDS4.0120714.02051K562FXR2
chr167058848770588501+3'-UTR,CDS,intron-Proximal3.689483.30172K562DDX24
chr167060575270605816+3'-UTR4.7213714.91647K562RBM15
chr167060575370605814+3'-UTR5.1661217.14543K562NOLC1
chr167059008170590124+3'-UTR,CDS,intron-Proximal3.271235.26861K562DDX24
chr167058900970589107+3'-UTR,CDS3.361749.25116K562FXR2
chr167058832970588393+3'-UTR,CDS,intron-Proximal3.0456810.38337K562BUD13
chr167060613070606174+3'-UTR4.6246519.14415K562PUM2
chr167060600970606063+3'-UTR3.2637312.83575K562PUM2
chr167060606770606157+3'-UTR3.0139810.73469K562DDX6
chr167058848070588538+3'-UTR,CDS,intron-Proximal4.4346213.58524HepG2PRPF8
chr167060606870606148+3'-UTR3.2220112.47984HepG2DDX55
chr167060606570606161+3'-UTR3.996399.57966K562TIA1
chr167060596270606047+3'-UTR3.592846.27732HepG2PCBP2
chr167058849970588511+3'-UTR,CDS,intron-Proximal3.657299.30654K562AQR
chr167058452670584599+3'-UTR,CDS,intron-Distal,intron-Proximal3.9587612.10533HepG2AQR
chr167058905070589105+3'-UTR,CDS4.399917.17313K562FMR1
chr167058454870584581+3'-UTR,CDS,intron-Distal,intron-Proximal3.288096.00907HepG2PPIG
chr167058902570589110+3'-UTR,CDS,intron-Proximal3.6032711.89075K562GRWD1
chr167056048970560532+3'-UTR,5'-UTR,intron-Distal,intron-Proximal5.500158.51610HepG2SUB1
chr167060613570606158+3'-UTR5.818099.21129HepG2SUB1
chr167058895470589019+3'-UTR,CDS3.700634.48452HepG2FXR2
chr167058901770589109+3'-UTR,CDS4.0856718.31056HepG2G3BP1
chr167056051970560563+3'-UTR,5'-UTR,CDS,intron-Distal4.794136.56513K562FXR2
chr167060584570605900+3'-UTR3.343686.71415K562DDX55
chr167058453270584590+3'-UTR,CDS,intron-Distal,intron-Proximal3.727158.52456K562AQR
chr167060570470605752+3'-UTR,CDS3.6249911.42460HepG2GRWD1
chr167056277270562799+3'-UTR,CDS,intron-Proximal3.596404.88100K562AQR
chr167055784270557862+5'-UTR,intron-Proximal5.5700314.81877K562AQR
chr167055774070557832+5'-UTR,intron-Proximal5.3464729.42045HepG2SUB1
chr167055786270557882+5'-UTR,intron-Proximal5.6261316.41423K562AQR
chr167055783370557878+5'-UTR,intron-Proximal3.445865.66421K562PRPF8
chr167055784770557883+5'-UTR,intron-Proximal4.0339912.22234HepG2PRPF8
chr167055783070557842+5'-UTR,intron-Proximal5.2218311.12698K562AQR
chr167055778670557847+5'-UTR,intron-Proximal6.2856413.87810HepG2PRPF8
chr167055782570557878+5'-UTR,intron-Proximal4.6731910.73647HepG2AQR
chr167059922570599369+CDS,intron-Proximal3.7634620.21288K562EFTUD2
chr167057303270573087+CDS3.884188.80371HepG2G3BP1
chr167060559870605614+CDS3.323063.72202HepG2G3BP1
chr167058226270582287+CDS,intron-Proximal3.481514.83899HepG2PRPF8
chr167060218570602213+CDS,intron-Proximal3.804188.66838HepG2BCLAF1
chr167060299270603046+CDS,intron-Proximal4.9347210.22063K562RPS3
chr167060228670602356+CDS3.200328.96803HepG2G3BP1
chr167056474570564819+CDS3.594794.30200K562LIN28B
chr167056916470569232+CDS,intron-Proximal3.538507.17119K562SF3B4
chr167059012070590250+CDS,intron-Proximal3.6663518.51414HepG2GRWD1
chr167056919370569251+CDS,intron-Proximal3.261626.09708HepG2BUD13
chr167059916370599231+CDS,intron-Proximal3.374266.71915K562PRPF8
chr167058228370582342+CDS3.6371311.13847HepG2G3BP1
chr167059928170599369+CDS3.230703.92899HepG2PRPF4
chr167058228870582354+CDS,intron-Proximal3.368537.29897K562DDX24
chr167060291170602966+CDS,intron-Proximal3.620987.15565HepG2BUD13
chr167058233770582378+CDS,intron-Proximal3.764574.70265HepG2AQR
chr167057219070572263+CDS,intron-Proximal3.001217.76447HepG2BUD13
chr167057837570578448+CDS,intron-Proximal4.181789.50921HepG2PRPF8
chr167060131370601336+CDS,intron-Proximal3.344433.13426K562RPS3
chr167057837870578466+CDS,intron-Proximal4.4173413.68796K562BUD13
chr167057573570575746+CDS,intron-Proximal4.5073516.15323K562AQR
chr167058224770582279+CDS,intron-Proximal3.809373.67894HepG2AQR
chr167056932270569366+CDS,intron-Proximal3.707605.35619K562AQR
chr167057561670575669+CDS4.7704113.05367K562YBX3
chr167058233670582385+CDS,intron-Proximal6.6527143.42597HepG2PRPF8
chr167060235570602397+CDS3.051124.32589HepG2PPIG
chr167058231070582336+CDS5.1714427.85381HepG2PRPF8
chr167059554570595558+CDS3.313853.69775K562YBX3
chr167059929070599379+CDS3.9318711.23452K562RPS3
chr167057832370578376+CDS,intron-Proximal3.115759.55408HepG2BUD13
chr167057236070572404+CDS,intron-Proximal4.663765.90930HepG2AQR
chr167060231870602383+CDS4.280176.83513K562FMR1
chr167057560470575655+CDS3.939378.74772HepG2PPIG
chr167056920470569256+CDS,intron-Proximal3.161813.53355K562U2AF1
chr167059078870590862+CDS,intron-Proximal3.271006.79075HepG2RPS3
chr167059080370590851+CDS4.317606.49194K562FXR2
chr167059552770595559+CDS,intron-Proximal3.016953.41438K562BUD13
chr167059921570599313+CDS,intron-Proximal4.720486.59856K562SF3B4
chr167056920070569255+CDS,intron-Proximal3.529618.16706HepG2U2AF2
chr167058233470582415+CDS,intron-Proximal4.5083929.87864K562PRPF8
chr167057301970573076+CDS4.599655.27247HepG2RPS3
chr167060221270602246+CDS5.085486.04622HepG2G3BP1
chr167060134070601435+CDS4.9002112.52808K562DDX24
chr167057555570575602+CDS,intron-Proximal3.414945.72758K562GPKOW
chr167056651970566605+CDS,intron-Proximal4.2381114.31265K562PRPF8
chr167059092070590955+CDS,intron-Proximal3.391267.15565HepG2BUD13
chr167058234070582389+CDS,intron-Proximal4.0448210.20701K562BUD13
chr167058234470582400+CDS,intron-Proximal3.9614112.26379K562AQR
chr167059435270594406+CDS,intron-Proximal3.883138.66868K562BUD13
chr167060132370601437+CDS4.1113521.34229HepG2G3BP1
chr167059557270595623+CDS3.676677.94246HepG2G3BP1
chr167060405170604128+CDS,intron-Proximal5.2860913.79863K562AQR
chr167059011370590210+CDS3.5208513.72827HepG2G3BP1
chr167060135970601416+CDS3.912383.48187K562RBM15
chr167056060270560616+CDS,intron-Distal3.5271613.40626K562YBX3
chr167059434170594413+CDS,intron-Proximal3.125659.10902HepG2BUD13
chr167059927370599356+CDS4.6124416.62180HepG2G3BP1
chr167060131770601425+CDS4.2504411.33828K562FXR2
chr167059896770599037+CDS,intron-Proximal3.360429.61064HepG2G3BP1
chr167057833670578432+CDS,intron-Proximal3.5397011.82591K562DDX24
chr167058225470582340+CDS,intron-Proximal3.6183517.67407K562BUD13
chr167060300970603014+CDS3.073673.05161HepG2PPIG
chr167059794270597983+CDS,intron-Proximal3.534105.73990HepG2PRPF8
chr167058221070582305+CDS,intron-Proximal4.5692011.17285K562SF3B4
chr167060135470601430+CDS3.695745.84875HepG2FXR2
chr167060509970605142+CDS,intron-Proximal3.687826.57821HepG2AQR
chr167059904670599108+CDS3.312558.31208HepG2PPIG
chr167057561170575668+CDS3.0694013.48662HepG2BCLAF1
chr167059075570590834+CDS,intron-Proximal5.0620815.98112K562AQR
chr167056479570564820+CDS3.571387.52806HepG2G3BP1
chr167059557470595664+CDS3.320754.24648K562METAP2
chr167060300170603044+CDS3.9953810.44663HepG2G3BP1
chr167059779370597941+CDS3.132704.38893K562ZNF800
chr167060384070603911+CDS,intron-Proximal4.588477.08280K562SF3B4
chr167059915270599164+CDS4.379104.83899HepG2PRPF8
chr167059940270599428+CDS,intron-Proximal3.8975614.64456K562YBX3
chr167060239370602434+CDS,intron-Proximal3.330104.22621HepG2PRPF8
chr167056057370560602+CDS,intron-Distal3.9661116.39160K562YBX3
chr167060238370602399+CDS,intron-Proximal3.294864.76005K562FMR1
chr167060510170605113+CDS,intron-Proximal4.738049.08030K562AQR
chr167057837570578433+CDS4.017868.35801K562FXR2
chr167059023670590243+CDS,intron-Proximal4.1394811.12628K562AQR
chr167059086170590906+CDS4.935775.57576K562FXR2
chr167059551870595562+CDS,intron-Proximal3.3232810.09884HepG2BUD13
chr167059916470599217+CDS,intron-Proximal5.3668320.13125HepG2PRPF8
chr167060294570603017+CDS,intron-Proximal3.196316.45823K562ZNF622
chr167060132770601425+CDS3.6857711.05753K562FMR1
chr167060138770601428+CDS3.567543.99278HepG2EIF3D
chr167058227170582285+CDS,intron-Proximal3.485148.10600HepG2PPIG
chr167059928270599372+CDS3.528174.63109K562GRWD1
chr167056481570564863+CDS,intron-Proximal4.5631010.26986HepG2PRPF8
chr167060294470603001+CDS,intron-Proximal4.400215.05122K562DDX24
chr167056927370569324+CDS,intron-Proximal3.2955410.14543HepG2PPIG
chr167059077070590815+CDS,intron-Proximal4.735954.62947HepG2AQR
chr167056638170566430+CDS,intron-Proximal3.308987.77718HepG2G3BP1
chr167059788070597949+CDS3.3149115.54241HepG2BCLAF1
chr167060383770603927+CDS,intron-Proximal3.699957.75156HepG2AQR
chr167059562370595687+CDS3.317748.52133HepG2G3BP1
chr167056302970563096+CDS3.192686.39378K562FXR2
chr167057832770578372+CDS,intron-Proximal4.624755.68078HepG2AQR
chr167059023370590308+CDS,intron-Proximal3.7857810.59198HepG2PRPF8
chr167056061170560658+CDS,intron-Distal,intron-Proximal3.796543.44979HepG2PRPF8
chr167059942170599428+CDS,intron-Proximal3.441924.31813HepG2G3BP1
chr167058231970582397+CDS,intron-Proximal3.451965.82046K562SF3B4
chr167060288470602965+CDS,intron-Proximal3.467125.10493HepG2AQR
chr167059927070599320+CDS,intron-Proximal3.599695.97015HepG2EFTUD2
chr167057222270572254+CDS,intron-Proximal3.085895.55567HepG2PPIG
chr167059896370598999+CDS,intron-Proximal3.063513.41438K562BUD13
chr167058231470582424+CDS,intron-Proximal4.2191514.28605K562EFTUD2
chr167060218870602201+CDS3.736254.22242HepG2G3BP1
chr167059934770599387+CDS3.057906.48923K562FMR1
chr167056467970564754+CDS3.500133.07416K562FXR1
chr167056290870562958+CDS3.316063.34231K562RBM15
chr167058223270582305+CDS,intron-Proximal4.9941117.55185K562AQR
chr167059449370594496+CDS,intron-Proximal4.158406.80869K562AQR
chr167057573070575770+CDS,intron-Proximal4.376004.62947HepG2AQR
chr167056650970566559+CDS,intron-Proximal4.318317.62597HepG2PRPF8
chr167057559770575673+CDS3.7150412.40202HepG2GRWD1
chr167057308670573140+CDS,intron-Proximal3.150779.15882HepG2BUD13
chr167059938970599402+CDS3.7796914.13725K562YBX3
chr167060131370601321+CDS,intron-Proximal3.441229.61197K562YBX3
chr167060499070605022+CDS,intron-Proximal3.492114.98672K562AQR
chr167059091770590975+CDS,intron-Proximal4.4240615.49797HepG2PRPF8
chr167059928570599395+CDS5.1276515.84269K562FXR2
chr167059778870597872+CDS4.0727610.69434HepG2GRWD1
chr167059780470597880+CDS3.8097812.60438HepG2G3BP1
chr167059905870599109+CDS3.1550910.01526HepG2BUD13
chr167059433870594391+CDS,intron-Proximal3.213916.13643K562AQR
chr167057572970575779+CDS,intron-Proximal5.7326719.21681HepG2PRPF8
chr167059085270590911+CDS3.296035.16533K562FMR1
chr167060398070604024+CDS3.521255.90680HepG2PPIG
chr167060133670601427+CDS4.6962410.94551K562RPS3
chr167059927170599333+CDS3.789868.15794K562BUD13
chr167059897770599018+CDS3.597848.19964HepG2BCLAF1
chr167057834370578357+CDS4.767834.83675HepG2G3BP1
chr167060137870601423+CDS4.534323.95534HepG2CDC40
chr167059568570595727+CDS,intron-Proximal3.701803.98203HepG2PRPF8
chr167058228170582338+CDS4.848925.61356K562FMR1
chr167057842070578437+CDS,intron-Proximal3.331444.08943HepG2LIN28B
chr167060390870603940+CDS,intron-Proximal3.663648.21826HepG2G3BP1
chr167059788070597949+CDS3.0854412.12745HepG2G3BP1
chr167060235670602398+CDS3.723699.77247HepG2G3BP1
chr167059017370590236+CDS3.370767.93092K562DDX24
chr167057233670572391+CDS,intron-Proximal3.807437.48825K562GPKOW
chr167059442770594471+CDS4.463404.92107K562FXR2
chr167056919970569258+CDS,intron-Proximal3.535668.11379K562BUD13
chr167060219070602244+CDS3.118356.88121K562YBX3
chr167059011370590231+CDS3.6074712.40338K562RPS3
chr167059014870590226+CDS3.095184.89585K562FXR2
chr167060239770602402+CDS,intron-Proximal4.1679510.52556K562AQR
chr167057308170573142+CDS,intron-Proximal3.225683.57123K562GPKOW
chr167059022070590234+CDS3.141533.86052K562YBX3
chr167060397570604052+CDS3.702954.22960K562SND1
chr167060230270602399+CDS,intron-Proximal4.4146410.19173K562FXR2
chr167057833370578374+CDS,intron-Proximal3.786885.01422K562GPKOW
chr167057219270572245+CDS,intron-Proximal3.952435.90528HepG2AQR
chr167060294470602985+CDS,intron-Proximal3.208655.74492HepG2G3BP1
chr167059903770599139+CDS4.4691519.73350HepG2G3BP1
chr167058228570582356+CDS,intron-Proximal3.4922915.66093HepG2PPIG
chr167060292270602976+CDS,intron-Proximal4.031117.79506K562AQR
chr167056303770563094+CDS4.785505.26571K562FMR1
chr167059437170594414+CDS,intron-Proximal3.492273.02618HepG2UCHL5
chr167059928270599347+CDS3.638979.44015K562FMR1
chr167057837370578435+CDS3.173409.96847HepG2G3BP1
chr167057834570578425+CDS3.2314216.70890HepG2PPIG
chr167059093070591013+CDS,intron-Proximal6.6554821.86510K562AQR
chr167059445070594477+CDS3.893145.22975HepG2G3BP1
chr167059023270590322+CDS,intron-Proximal3.8820212.10684K562PRPF8
chr167059940970599481+CDS,intron-Proximal3.003605.32219K562PRPF8
chr167057834970578438+CDS,intron-Proximal3.429395.79197K562LIN28B
chr167060391770603970+CDS3.759853.66607K562FMR1
chr167057842570578436+CDS3.802379.30518HepG2PPIG
chr167059555870595617+CDS3.1006710.68075K562YBX3
chr167059431570594389+CDS,intron-Proximal5.046526.03362HepG2AQR
chr167057557370575652+CDS3.412489.08070HepG2G3BP1
chr167057193370571954+intron-Distal6.3429024.37070HepG2DKC1
chr167058282970582899+intron-Distal4.129454.03833K562HNRNPM
chr167057195570571990+intron-Distal3.2792812.00565HepG2PTBP1
chr167057190770571993+intron-Distal4.050969.94355HepG2NIP7
chr167057193070571954+intron-Distal4.2916716.63780K562SMNDC1
chr167058334670583431+intron-Distal4.659239.71187HepG2HNRNPM
chr167056342770563492+intron-Distal3.084656.79425K562UTP18
chr167058818170588280+intron-Distal,intron-Proximal4.6343111.34016K562TARDBP
chr167059097770591057+intron-Distal,intron-Proximal3.847437.75444K562PRPF8
chr167056340970563490+intron-Distal5.88103400.00000HepG2NOLC1
chr167058026370580327+intron-Distal3.789475.28763HepG2ILF3
chr167057778670577824+intron-Distal4.103337.85753HepG2ILF3
chr167058491570585050+intron-Distal3.013493.32917K562HNRNPA1
chr167056503170565077+intron-Distal3.835103.18711HepG2ILF3
chr167057195370571999+intron-Distal4.6409681.69080K562PTBP1
chr167058413670584275+intron-Distal3.528414.21146HepG2HNRNPM
chr167058914370589214+intron-Distal,intron-Proximal3.972508.19973HepG2EFTUD2
chr167058911070589211+intron-Distal,intron-Proximal3.9973511.86192K562EFTUD2
chr167056342470563491+intron-Distal3.1254417.17487K562XRCC6
chr167057195470571989+intron-Distal5.45125400.00000HepG2DKC1
chr167058305270583107+intron-Distal4.401615.04868K562HNRNPM
chr167056344170563469+intron-Distal3.1179913.08969HepG2SDAD1
chr167056342470563490+intron-Distal3.432953.38909K562ZC3H8
chr167057192170572005+intron-Distal3.327903.10135K562SSB
chr167056343970563476+intron-Distal3.0050929.36608K562PTBP1
chr167057195570572000+intron-Distal3.1912522.02555K562HNRNPUL1
chr167057776970577786+intron-Distal4.773966.39345HepG2ILF3
chr167060258170602664+intron-Distal3.242626.66422K562KHSRP
chr167057211570572195+intron-Distal,intron-Proximal3.839736.89441K562KHSRP
chr167056342070563489+intron-Distal4.74257400.00000HepG2DKC1
chr167057198970571999+intron-Distal5.1120980.86100HepG2DKC1
chr167057192770571953+intron-Distal3.8502226.99512K562PTBP1
chr167057898270579031+intron-Distal3.142404.08009HepG2HNRNPC
chr167057191670571998+intron-Distal7.13124400.00000HepG2NOLC1
chr167058304070583105+intron-Distal5.0451414.44091HepG2HNRNPM
chr167057195970571973+intron-Distal3.2911211.11927HepG2SMNDC1
chr167057195770571987+intron-Distal5.16068400.00000K562SMNDC1
chr167058252670582583+intron-Distal3.022873.64681K562EXOSC5
chr167056487470564931+intron-Distal,intron-Proximal4.843064.85913HepG2HNRNPC
chr167060276270602812+intron-Distal3.885327.07404HepG2U2AF2
chr167058335970583409+intron-Distal3.575774.31658K562EXOSC5
chr167060267170602738+intron-Distal4.588795.34107HepG2KHSRP
chr167060266570602751+intron-Distal4.9286223.66943K562KHSRP
chr167057195470571988+intron-Distal5.37446400.00000K562AATF
chr167057194370572000+intron-Distal3.1934521.42312K562WDR43
chr167056341570563488+intron-Distal5.9302735.89862HepG2LARP7
chr167059867470598785+intron-Distal3.208765.39758K562KHSRP
chr167057199270571998+intron-Distal4.57742400.00000K562SMNDC1
chr167057193170572000+intron-Distal5.926168.63727K562ZC3H8
chr167058588470585939+intron-Distal3.169613.39857HepG2HNRNPM
chr167056344870563478+intron-Distal5.612866.73414K562NIPBL
chr167060514470605203+intron-Distal,intron-Proximal6.1045912.46873K562AQR
chr167056341170563489+intron-Distal5.42431400.00000K562AATF
chr167058413770584235+intron-Distal3.426934.32964K562HNRNPM
chr167056348170563489+intron-Distal3.9095219.53005K562SMNDC1
chr167057194870571983+intron-Distal3.9340236.79907K562PHF6
chr167059948170599547+intron-Distal,intron-Proximal4.6698610.02061K562PRPF8
chr167056654470566626+intron-Distal,intron-Proximal4.674534.03304K562RBM22
chr167058583770585961+intron-Distal3.284944.13575K562KHSRP
chr167057195970571968+intron-Distal3.7400628.23940K562SF3B4
chr167058805970588079+intron-Distal3.918507.69621K562KHSRP
chr167057193370572004+intron-Distal5.5800514.54680HepG2LARP7
chr167057196870571998+intron-Distal3.9117237.71797K562SF3B4
chr167057197370571999+intron-Distal3.4974315.97314HepG2SMNDC1
chr167055894270559016+intron-Distal,intron-Proximal4.060653.82697HepG2HNRNPC
chr167060410170604138+intron-Proximal4.347433.85435K562PRPF8
chr167058220070582247+intron-Proximal4.901034.97857HepG2AQR
chr167060382970603888+intron-Proximal3.095994.94551HepG2SF3B4
chr167060143970601480+intron-Proximal5.221837.28294K562AQR
chr167058851170588563+intron-Proximal6.4106618.07825K562AQR
chr167060304470603086+intron-Proximal5.9738512.10660K562AQR
chr167059449670594557+intron-Proximal4.8460212.35151K562AQR
chr167057846170578479+intron-Proximal3.633189.84476K562AQR
chr167060240270602428+intron-Proximal5.4947416.98953K562AQR
chr167057550470575565+intron-Proximal4.771156.23935HepG2AQR
chr167057844870578507+intron-Proximal4.245997.85990HepG2PRPF8
chr167056310270563159+intron-Proximal4.9860711.82040K562AQR
chr167059568770595715+intron-Proximal4.9645410.08262K562AQR
chr167060286170602940+intron-Proximal3.473844.34573HepG2SF3B4
chr167056652870566595+intron-Proximal4.667367.50107K562AQR
chr167059918070599270+intron-Proximal5.0821414.90892HepG2EFTUD2
chr167057574670575777+intron-Proximal4.9293516.50383K562AQR
chr167059945470599510+intron-Proximal5.066785.70963K562RBM22
chr167060510270605138+intron-Proximal3.564383.88924K562PRPF8
chr167059571570595728+intron-Proximal6.0135811.56697K562AQR
chr167060511370605144+intron-Proximal6.0948910.04245K562AQR
chr167059944770599470+intron-Proximal5.817889.63974K562AQR
chr167060304970603092+intron-Proximal3.160704.64824K562PRPF8
chr167058911670589182+intron-Proximal3.705483.03597HepG2TIA1
chr167059942870599453+intron-Proximal4.884764.35676HepG2PRPF8
chr167056271970562732+intron-Proximal4.163464.32536HepG2SF3B4
chr167057311670573160+intron-Proximal3.632733.39008HepG2AQR
chr167056273270562759+intron-Proximal4.163464.32536HepG2SF3B4
chr167059024370590298+intron-Proximal4.8190225.07966K562AQR
chr167059942770599447+intron-Proximal4.429356.39176K562AQR
chr167057236570572413+intron-Proximal4.227159.29543K562AQR
chr167060383670603881+intron-Proximal5.019109.24007HepG2SF3A3
chr167059000870590067+intron-Proximal3.513724.98422K562PRPF8
chr167060240070602447+intron-Proximal3.454394.07440K562PRPF8
chr167060242870602439+intron-Proximal6.4966017.76631K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SF3B3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SF3B3 is not available on ENCORE database.

  • 141 RBPs can affect the levels of SF3B3.  








The Knockdown/knockout RNA-Seq assay for SF3B3 is not available on ENCORE database.





141 RBPs can affect the gene expression of SF3B3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SF3B3ENSG00000189091.86708.583508720.69520-0.378403.647002.56970HepG2ABCF1
SF3B3ENSG00000189091.85302.293506640.52430-0.324702.369901.40210HepG2AKAP8
SF3B3ENSG00000189091.85573.369007070.58570-0.343307.265106.08890HepG2AKAP8L
SF3B3ENSG00000189091.86465.249907868.79930-0.283402.841901.41900HepG2ATP5C1
SF3B3ENSG00000189091.89591.4060011942.03450-0.316206.092705.13660HepG2AUH
SF3B3ENSG00000189091.85026.243307256.30870-0.529805.313304.00310HepG2BCCIP
SF3B3ENSG00000189091.83258.302006305.01800-0.9524016.6304014.72660HepG2BCLAF1
SF3B3ENSG00000189091.85813.744907594.23790-0.385404.501603.75940HepG2BOP1
SF3B3ENSG00000189091.85310.389506533.30410-0.299003.204701.88410HepG2BUD13
SF3B3ENSG00000189091.85505.900908009.05460-0.5407011.327209.93720HepG2CALR
SF3B3ENSG00000189091.86861.935409971.84600-0.539204.658303.37910HepG2CCAR1
SF3B3ENSG00000189091.85098.913207035.85650-0.4645014.9687013.67830HepG2CKAP4
SF3B3ENSG00000189091.84014.991106971.80480-0.7961015.0745013.62720HepG2CPSF6
SF3B3ENSG00000189091.83586.969404481.96130-0.321402.996701.87920HepG2CSTF2
SF3B3ENSG00000189091.88290.048809546.29730-0.203602.219301.63310HepG2CELF1
SF3B3ENSG00000189091.88422.9006010263.20620-0.285105.220404.24820HepG2DAZAP1
SF3B3ENSG00000189091.87422.752306508.939200.189403.201402.30900HepG2DDX19B
SF3B3ENSG00000189091.85843.739506982.62460-0.256903.549202.23860HepG2DDX1
SF3B3ENSG00000189091.84333.174006343.23480-0.549808.673907.54330HepG2DDX21
SF3B3ENSG00000189091.84704.160707134.53520-0.600906.745905.60230HepG2DDX55
SF3B3ENSG00000189091.84315.788307917.03590-0.875306.854205.35210HepG2DDX59
SF3B3ENSG00000189091.85093.273007542.72230-0.566507.841806.23050HepG2DDX5
SF3B3ENSG00000189091.85631.205408215.26650-0.544905.460004.61790HepG2DDX6
SF3B3ENSG00000189091.85003.840906846.84380-0.452409.983708.71230HepG2DNAJC21
SF3B3ENSG00000189091.85100.707306786.46520-0.4120014.1001012.74310HepG2DNAJC2
SF3B3ENSG00000189091.83832.259404799.66890-0.324702.754201.64800HepG2EFTUD2
SF3B3ENSG00000189091.84488.735707896.89710-0.8150013.3788012.14320HepG2EIF2S1
SF3B3ENSG00000189091.83543.656004673.78670-0.399403.457002.45300HepG2EIF3D
SF3B3ENSG00000189091.84893.239305988.95830-0.291503.396402.21660HepG2EIF3G
SF3B3ENSG00000189091.86325.022008726.69090-0.464404.126003.34960HepG2EIF4A3
SF3B3ENSG00000189091.87493.181109700.31670-0.372503.721402.78490HepG2EIF4G2
SF3B3ENSG00000189091.88278.0778013711.88340-0.7281017.9152016.60620HepG2ETF1
SF3B3ENSG00000189091.83349.458404177.35400-0.318703.917802.49920HepG2FAM120A
SF3B3ENSG00000189091.86185.369708805.69210-0.509605.066104.05410HepG2FIP1L1
SF3B3ENSG00000189091.84086.072405938.34310-0.539306.138004.32610HepG2FKBP4
SF3B3ENSG00000189091.83192.988106984.00290-1.129107.194605.56380HepG2FTO
SF3B3ENSG00000189091.85950.136208168.17880-0.457104.300003.48020HepG2G3BP1
SF3B3ENSG00000189091.86516.630308672.21080-0.412304.188103.08210HepG2G3BP2
SF3B3ENSG00000189091.86131.047307902.75690-0.366203.042902.37560HepG2GPKOW
SF3B3ENSG00000189091.83855.866206912.43930-0.8421019.9896018.51750HepG2HNRNPA1
SF3B3ENSG00000189091.87922.862709432.85930-0.251703.052402.07610HepG2HNRNPA2B1
SF3B3ENSG00000189091.86164.220107688.83770-0.318803.398902.63750HepG2HNRNPC
SF3B3ENSG00000189091.86501.575208122.24850-0.321103.941703.10140HepG2HNRNPF
SF3B3ENSG00000189091.810955.464008272.167900.405204.693703.80490HepG2HNRNPK
SF3B3ENSG00000189091.84097.858807541.77610-0.8800017.0721015.69940HepG2HNRNPLL
SF3B3ENSG00000189091.84406.370906075.22530-0.463307.238605.81100HepG2HNRNPM
SF3B3ENSG00000189091.83398.183007638.00170-1.1684077.3329074.64330HepG2HNRNPU
SF3B3ENSG00000189091.86285.671907998.00640-0.347604.558503.64800HepG2IGF2BP1
SF3B3ENSG00000189091.85919.607408302.60050-0.488105.369104.45580HepG2IGF2BP2
SF3B3ENSG00000189091.85486.174007801.96130-0.5080022.5929020.73650HepG2ILF2
SF3B3ENSG00000189091.84079.110005249.13720-0.363802.400901.30700HepG2KHDRBS1
SF3B3ENSG00000189091.85179.823407224.72250-0.480003.517002.10770HepG2KRR1
SF3B3ENSG00000189091.85642.631208808.87760-0.642608.538407.40090HepG2MAGOH
SF3B3ENSG00000189091.85471.622407126.23640-0.381205.045703.97840HepG2MSI2
SF3B3ENSG00000189091.85052.596807692.34620-0.606404.693803.41260HepG2MTPAP
SF3B3ENSG00000189091.88818.1493010177.04950-0.206802.048201.38980HepG2NOL12
SF3B3ENSG00000189091.85379.160706687.46430-0.314103.069102.28240HepG2NSUN2
SF3B3ENSG00000189091.85540.946408073.79620-0.543106.150405.08520HepG2PABPC4
SF3B3ENSG00000189091.85093.222707560.28020-0.5699018.7241016.89010HepG2PARN
SF3B3ENSG00000189091.85635.032408453.38940-0.5851021.1199019.69760HepG2PCBP1
SF3B3ENSG00000189091.83563.303807043.65720-0.9831010.904109.03870HepG2PCBP2
SF3B3ENSG00000189091.85471.994206812.48250-0.316105.054204.08640HepG2PPIL4
SF3B3ENSG00000189091.82368.392805503.31800-1.2164028.2899026.14560HepG2PRPF8
SF3B3ENSG00000189091.86677.517208601.63760-0.365308.878308.01120HepG2PTBP1
SF3B3ENSG00000189091.87765.534309715.27430-0.323203.453002.79680HepG2PUF60
SF3B3ENSG00000189091.88495.1099010313.64900-0.279904.479703.76460HepG2PUM1
SF3B3ENSG00000189091.84081.3569010305.83190-1.3363055.6228052.98200HepG2PUM2
SF3B3ENSG00000189091.84774.292007168.71910-0.5864020.1272018.73870HepG2PUS1
SF3B3ENSG00000189091.87314.874309315.79060-0.348805.872505.01060HepG2QKI
SF3B3ENSG00000189091.87401.035309008.72300-0.283603.605102.64010HepG2RBM15
SF3B3ENSG00000189091.88716.5599011460.42420-0.394808.019407.24450HepG2RBM22
SF3B3ENSG00000189091.86484.012908454.67700-0.382905.279204.37600HepG2RBM25
SF3B3ENSG00000189091.84138.852606254.83830-0.595706.753105.09570HepG2RCC2
SF3B3ENSG00000189091.87784.019109572.79860-0.298406.298705.53790HepG2NELFE
SF3B3ENSG00000189091.87002.508508915.75760-0.348508.412807.42570HepG2RECQL
SF3B3ENSG00000189091.84734.050808750.99390-0.8864017.0996015.68800HepG2RPLP0
SF3B3ENSG00000189091.83857.583906677.25770-0.791607.141305.67710HepG2RPS10
SF3B3ENSG00000189091.82522.942404547.89210-0.8501020.4102018.97840HepG2RPS19
SF3B3ENSG00000189091.84016.397907103.89230-0.8227015.5588013.77740HepG2RPS2
SF3B3ENSG00000189091.83338.175205531.71770-0.728707.233205.95050HepG2RPS3A
SF3B3ENSG00000189091.85400.440507251.46280-0.425204.615503.21290HepG2RPS5
SF3B3ENSG00000189091.81396.271005443.88140-1.9631059.2687056.57940HepG2RRP9
SF3B3ENSG00000189091.84471.824806801.96240-0.6051026.1264024.42240HepG2SAFB2
SF3B3ENSG00000189091.83516.936104564.37300-0.376103.437802.38570HepG2SERBP1
SF3B3ENSG00000189091.812024.449307934.008600.599705.102504.16740HepG2SF3A3
SF3B3ENSG00000189091.810220.343507464.679700.453205.863404.86930HepG2SF3B1
SF3B3ENSG00000189091.87097.774809316.37050-0.392407.137706.09440HepG2SLBP
SF3B3ENSG00000189091.86595.428607932.21070-0.266307.545306.56300HepG2SMN1
SF3B3ENSG00000189091.84904.454506931.92400-0.499203.678002.56120HepG2SMNDC1
SF3B3ENSG00000189091.84740.554308305.83290-0.809107.675706.36840HepG2SNRNP70
SF3B3ENSG00000189091.810733.6120012943.82160-0.270104.537203.94100HepG2SRFBP1
SF3B3ENSG00000189091.85113.064309347.51690-0.8704052.2406050.75660HepG2SRSF1
SF3B3ENSG00000189091.86066.977009592.96520-0.6610018.1415016.73480HepG2SRSF5
SF3B3ENSG00000189091.86221.671007980.15070-0.359104.714803.84310HepG2SRSF7
SF3B3ENSG00000189091.85637.426107604.70150-0.4319012.7761011.74530HepG2SRSF9
SF3B3ENSG00000189091.86043.4118011237.76760-0.8949030.3872029.10310HepG2SSB
SF3B3ENSG00000189091.83671.529704811.92160-0.390202.554901.50350HepG2STIP1
SF3B3ENSG00000189091.84023.750606352.04080-0.658705.357703.68470HepG2SUB1
SF3B3ENSG00000189091.88579.8765010909.37600-0.346504.812804.03320HepG2SUCLG1
SF3B3ENSG00000189091.85357.793507293.33290-0.444903.251401.80610HepG2SUGP2
SF3B3ENSG00000189091.84908.663405945.58350-0.276502.786701.84370HepG2SUPT6H
SF3B3ENSG00000189091.83204.428407102.20400-1.1482023.3894021.76780HepG2SUPV3L1
SF3B3ENSG00000189091.83767.424907351.76370-0.9645022.6034020.91200HepG2TARDBP
SF3B3ENSG00000189091.83693.944504760.28780-0.365903.367702.27530HepG2TFIP11
SF3B3ENSG00000189091.85214.146207720.21380-0.5662011.051509.41360HepG2TIA1
SF3B3ENSG00000189091.82567.850307421.64440-1.5312078.2846076.31670HepG2TIAL1
SF3B3ENSG00000189091.85436.163307488.09740-0.4620013.2811012.17750HepG2TRIM56
SF3B3ENSG00000189091.86578.985009492.15690-0.528909.409307.61250HepG2TUFM
SF3B3ENSG00000189091.84151.026707532.40400-0.8596017.3960015.76810HepG2U2AF1
SF3B3ENSG00000189091.83124.908106302.89780-1.012203.348802.25950HepG2U2AF2
SF3B3ENSG00000189091.86489.1582010047.78870-0.630807.811506.37650HepG2UBE2L3
SF3B3ENSG00000189091.82487.342904195.41130-0.7542011.305209.79050HepG2UCHL5
SF3B3ENSG00000189091.85027.831307036.27150-0.484909.573708.40890HepG2UPF1
SF3B3ENSG00000189091.84260.443206503.13890-0.610105.310203.89600HepG2UPF2
SF3B3ENSG00000189091.85924.063307232.16100-0.287804.934103.57370HepG2UTP18
SF3B3ENSG00000189091.83578.702804954.76270-0.469403.163301.98370HepG2XPO5
SF3B3ENSG00000189091.84816.710806991.34440-0.537506.709005.59500HepG2XRN2
SF3B3ENSG00000189091.85705.916608757.23150-0.6180014.6224013.27630HepG2ZC3H8
SF3B3ENSG00000189091.85516.289607738.52500-0.4884010.9722010.06100HepG2ZNF622
SF3B3ENSG00000189091.810771.2247013180.55510-0.291202.621201.44080K562ABCF1
SF3B3ENSG00000189091.88551.788206442.199600.4086011.000309.96360K562AGGF1
SF3B3ENSG00000189091.88143.847206703.357600.280702.647502.00780K562AKAP8L
SF3B3ENSG00000189091.87816.5521010757.83500-0.460806.649905.80390K562AQR
SF3B3ENSG00000189091.88493.284407033.354500.272003.811502.72420K562ATP5C1
SF3B3ENSG00000189091.86330.945107783.35810-0.298006.505405.00940K562BCLAF1
SF3B3ENSG00000189091.85284.111706878.19760-0.380403.847402.81870K562BOP1
SF3B3ENSG00000189091.83653.290204493.65840-0.298702.549201.54600K562CCAR1
SF3B3ENSG00000189091.85368.898907313.25570-0.445907.110605.84530K562CPSF6
SF3B3ENSG00000189091.84873.213405765.53290-0.242602.279501.33940K562DDX3X
SF3B3ENSG00000189091.84778.785205845.48160-0.290704.178502.47210K562DDX6
SF3B3ENSG00000189091.810228.901007213.562900.5038012.8414010.63690K562DKC1
SF3B3ENSG00000189091.84928.858407832.79970-0.6683010.642508.74220K562EFTUD2
SF3B3ENSG00000189091.85323.540406332.91420-0.250503.883002.42730K562EIF2S1
SF3B3ENSG00000189091.87725.015909848.17770-0.350306.907905.84640K562EIF2S2
SF3B3ENSG00000189091.85497.193508386.80770-0.609406.426204.75220K562EIF3D
SF3B3ENSG00000189091.87709.646609475.38570-0.297502.813701.95710K562FIP1L1
SF3B3ENSG00000189091.85724.332607441.53230-0.378504.099203.05420K562FMR1
SF3B3ENSG00000189091.83764.552706307.57310-0.7446011.335409.35940K562FTO
SF3B3ENSG00000189091.87314.612406264.235800.223503.092502.45810K562FXR1
SF3B3ENSG00000189091.84241.132805572.96080-0.394002.634001.94810K562G3BP2
SF3B3ENSG00000189091.87262.743108385.93120-0.207502.422201.36220K562GLRX3
SF3B3ENSG00000189091.85434.623106982.16600-0.361504.171103.20150K562GPKOW
SF3B3ENSG00000189091.88690.5321013123.18480-0.5946011.7807010.19580K562GRSF1
SF3B3ENSG00000189091.812156.0704010302.490200.238602.305101.35060K562HNRNPL
SF3B3ENSG00000189091.85979.936407794.04980-0.382203.227202.21640K562HNRNPM
SF3B3ENSG00000189091.87751.3442010231.52340-0.400507.583906.10770K562HNRNPU
SF3B3ENSG00000189091.89380.9970012846.03660-0.453505.672504.54810K562HSPD1
SF3B3ENSG00000189091.84656.855105962.40610-0.356502.295801.45390K562KRR1
SF3B3ENSG00000189091.89290.133507969.555300.221102.118301.33920K562MBNL1
SF3B3ENSG00000189091.85735.534106815.45480-0.248902.295901.50000K562METAP2
SF3B3ENSG00000189091.812401.4102015402.83610-0.312702.833701.68820K562MSI2
SF3B3ENSG00000189091.86289.301508816.73560-0.4873016.2593014.51660K562MTPAP
SF3B3ENSG00000189091.87934.881505586.067800.506303.418302.41760K562NAA15
SF3B3ENSG00000189091.84661.621106400.71510-0.457406.326404.83120K562PCBP2
SF3B3ENSG00000189091.87600.9335010232.44030-0.428904.256803.22380K562PCBP3
SF3B3ENSG00000189091.87704.6357010124.21710-0.394003.660201.83640K562PKM
SF3B3ENSG00000189091.85990.410607848.63800-0.389805.979004.80450K562POLR2G
SF3B3ENSG00000189091.88774.2006010757.02800-0.293902.545101.76380K562PPIG
SF3B3ENSG00000189091.84771.626107622.20950-0.6757010.930709.42650K562PRPF8
SF3B3ENSG00000189091.84908.524205880.53010-0.260702.283601.46940K562PSIP1
SF3B3ENSG00000189091.812549.0821015766.55130-0.329303.397202.49200K562PUF60
SF3B3ENSG00000189091.88496.2647016431.55930-0.9516036.8517033.83880K562PUM2
SF3B3ENSG00000189091.87992.063906477.413600.303104.525103.78520K562RBM15
SF3B3ENSG00000189091.85494.905606701.24030-0.286302.576901.76810K562RBM22
SF3B3ENSG00000189091.83878.959607764.26100-1.0012017.4636015.40190K562RPS19
SF3B3ENSG00000189091.84064.331807793.59110-0.9393012.039509.41810K562RRP9
SF3B3ENSG00000189091.814996.011709666.398000.6334021.0522018.98570K562SF3A3
SF3B3ENSG00000189091.84638.056406852.60710-0.5631010.609909.23740K562SRSF1
SF3B3ENSG00000189091.84411.348905364.10330-0.282103.468802.00610K562SSB
SF3B3ENSG00000189091.85672.913907380.27290-0.379603.130302.04840K562SUPV3L1
SF3B3ENSG00000189091.84576.411006934.76560-0.599608.480807.15430K562TARDBP
SF3B3ENSG00000189091.85391.765906689.50110-0.311103.699602.73520K562TIA1
SF3B3ENSG00000189091.810506.7073012081.17890-0.201503.556802.10840K562TROVE2
SF3B3ENSG00000189091.83891.696805400.10880-0.472604.430902.98010K562U2AF1
SF3B3ENSG00000189091.83881.494705577.75900-0.523109.925508.40250K562U2AF2
SF3B3ENSG00000189091.85091.840707810.94660-0.617308.743806.85780K562UCHL5
SF3B3ENSG00000189091.88117.5446010386.97850-0.355709.532208.29680K562UPF1
SF3B3ENSG00000189091.85187.249608887.79310-0.7769018.9649016.70790K562WDR3
SF3B3ENSG00000189091.87399.672809242.38590-0.320808.310506.91940K562WDR43
SF3B3ENSG00000189091.85884.754007953.46920-0.434604.541102.85240K562XRN2
SF3B3ENSG00000189091.89959.3044012118.53420-0.283102.743801.88490K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SF3B3 is not available on ENCORE database.





21 RBPs can affect the splicing of SF3B3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESF3B3ENSG00000189091.8chr16+7058455270584581705822727058234570588348705885000.055000.000760.06311includedHepG2G3BP1
SESF3B3ENSG00000189091.8chr16+705730067057311070572225705723637057557170575737-0.079000.000000.00006excludedK562SF3B4
SESF3B3ENSG00000189091.8chr16+7058455270584581705822727058234570588348705885000.052000.000830.03253includedK562PRPF8
SESF3B3ENSG00000189091.8chr16+7058455270584581705822177058234570588348705885000.096000.000020.00062includedHepG2U2AF1
SESF3B3ENSG00000189091.8chr16+705955327059568770594252705944947059777870597936-0.074000.000000.00000excludedHepG2U2AF2
SESF3B3ENSG00000189091.8chr16+705730067057311070572225705723637057557170575737-0.078000.000000.00000excludedK562AQR
SESF3B3ENSG00000189091.8chr16+705955327059568770590711705909327059777870597953-0.059000.000000.00000excludedK562AQR
SESF3B3ENSG00000189091.8chr16+7058455270584581705822727058234570588348705885000.057000.000120.01003includedK562EFTUD2
SESF3B3ENSG00000189091.8chr16+7058455270584581705822727058234570588348705885000.324000.000000.00000includedHepG2SF3A3
SESF3B3ENSG00000189091.8chr16+7055876670558920705576937055783170560489705606290.052000.000030.00166includedHepG2SF3A3
SESF3B3ENSG00000189091.8chr16+705943717059449470590788705909327059777870597953-0.178000.000000.00029excludedHepG2SF3A3
SESF3B3ENSG00000189091.8chr16+705730067057311070572225705723637057557170575737-0.098000.000000.00000excludedHepG2SF3A3
SESF3B3ENSG00000189091.8chr16+7058455270584581705822727058234570588348705885000.097000.000130.01409includedHepG2TIAL1
SESF3B3ENSG00000189091.8chr16+7058455270584581705822177058234570588348705885000.064000.000010.00131includedHepG2PCBP1
SESF3B3ENSG00000189091.8chr16+705943717059449470590788705909327059777870597953-0.298000.000190.01105excludedK562SF3B1
SESF3B3ENSG00000189091.8chr16+7058455270584581705822727058234570588348705885000.064000.000280.06592includedHepG2FUBP3
SESF3B3ENSG00000189091.8chr16+7055876670558920705576937055783170560489705606290.059000.000000.00010includedHepG2HNRNPC
SESF3B3ENSG00000189091.8chr16+7058455270584581705822727058234570588348705885000.058000.000360.05244includedHepG2KHSRP
SESF3B3ENSG00000189091.8chr16+7055876670558920705576937055783170560489705606290.445000.000000.00000includedK562HNRNPC
A3SSSF3B3ENSG00000189091.8chr16+705883487058850070588396705885007058227270582345-0.254000.000000.00000shorterHepG2SF3A3
A3SSSF3B3ENSG00000189091.8chr16+7057298670573110705730067057311070572297705723630.085000.000000.00000longerK562AQR
MXESF3B3ENSG00000189091.8chr16+7057300670573110705755717057573770572225705723637057834070578436-0.087000.000550.049592includedK562HNRNPL
MXESF3B3ENSG00000189091.8chr16+7059437170594494705955327059568770590788705909327059777870597953-0.122000.000020.001912includedK562UCHL5
MXESF3B3ENSG00000189091.8chr16+70572986705731107057557170575737705722977057236370578340705784360.067000.000000.000001includedK562AQR
MXESF3B3ENSG00000189091.8chr16+70575571705757377057834070578436705722977057236370582272705824150.098000.000000.000161includedHepG2SF3A3
MXESF3B3ENSG00000189091.8chr16+7057300670573110705755717057573770572225705723637057834070578436-0.123000.000400.017882includedHepG2XRN2
MXESF3B3ENSG00000189091.8chr16+7057300670573110705755717057573770572225705723637057834070578436-0.093000.006200.094822includedHepG2DDX55
MXESF3B3ENSG00000189091.8chr16+7057300670573110705755717057573770572225705723637057834070578436-0.121000.000800.044212includedK562PHF6
MXESF3B3ENSG00000189091.8chr16+7057300670573110705755717057573770572225705723637057834070578436-0.087000.002380.055572includedK562SBDS
MXESF3B3ENSG00000189091.8chr16+7059437170594494705955327059568770590788705909327059777870597953-0.059000.000000.000322includedK562PPIL4
MXESF3B3ENSG00000189091.8chr16+70575571705757377057834070578436705722977057236370582272705824150.069000.000020.000781includedK562SF3B4
MXESF3B3ENSG00000189091.8chr16+70562775705628527056464770564820705604897056062970566381705665230.098000.002980.051861includedK562PRPF8
MXESF3B3ENSG00000189091.8chr16+7057834070578436705822727058234570575641705757377058455270584581-0.054000.001370.092732includedHepG2PRPF8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SF3B3 is not avaliable on ENCORE database.