L1CAM

General Information

Gene Name       : L1CAM
Gene ID             : ENSG00000198910.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: L1CAM)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878L1CAMENSG00000198910.130.000.030.01ENCSR000AEF
HepG2L1CAMENSG00000198910.137.612.475.04ENCSR985KAT
K562L1CAMENSG00000198910.130.150.110.13ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for L1CAM is not avaliable on ENCORE database.



Proteins bound to RNA
  • L1CAM RNA is bound by 5 proteins.  







eCLIP assay for L1CAM is not avaliable on ENCORE database.





5 proteins are bound to L1CAM RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX153127279153127319-3'-UTR,intron-Distal,intron-Proximal3.978719.62214HepG2PCBP2
chrX153127319153127355-3'-UTR,intron-Distal,intron-Proximal5.6251012.30102HepG2PCBP2
chrX153127208153127269-3'-UTR,intron-Distal3.553078.06806HepG2PCBP2
chrX153128348153128404-CDS,intron-Distal4.252233.82050HepG2SF3B4
chrX153132241153132327-CDS,intron-Distal,intron-Proximal3.609933.30795HepG2SND1
chrX153130575153130666-CDS,intron-Distal,intron-Proximal4.983554.06516HepG2SND1
chrX153148799153148898-intron-Distal4.775685.41525HepG2PCBP2
chrX153173270153173399-3'-UTR,CDS,intron-Distal3.045455.99204K562DDX55
chrX153148250153148303-intron-Distal3.866353.19526HepG2CSTF2T
chrX153173117153173270-3'-UTR,CDS,intron-Distal3.8012310.77973K562DDX55
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for L1CAM is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for L1CAM is not available on ENCORE database.

  • 164 RBPs can affect the levels of L1CAM.  








The Knockdown/knockout RNA-Seq assay for L1CAM is not available on ENCORE database.





164 RBPs can affect the gene expression of L1CAM :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
L1CAMENSG00000198910.8325.66560682.06730-1.0665010.366608.73260HepG2ABCF1
L1CAMENSG00000198910.81773.38990508.401101.8024093.8811091.68220HepG2ACO1
L1CAMENSG00000198910.8903.08640635.825700.506103.590202.40970HepG2AKAP8
L1CAMENSG00000198910.81184.68660510.817901.2135034.4033032.21940HepG2AKAP8L
L1CAMENSG00000198910.8896.35340615.321900.542604.556002.79550HepG2ATP5C1
L1CAMENSG00000198910.8419.25310632.12800-0.592406.724105.72690HepG2AUH
L1CAMENSG00000198910.81185.93790452.164601.3910015.9583013.54250HepG2BCCIP
L1CAMENSG00000198910.8218.62250392.84880-0.845506.066904.79460HepG2BCLAF1
L1CAMENSG00000198910.843.52470684.79090-3.9758092.5468090.24260HepG2BOP1
L1CAMENSG00000198910.8977.44640510.921400.9358013.4344010.94090HepG2BUD13
L1CAMENSG00000198910.8586.957901199.32760-1.0309011.154609.22450HepG2CCAR1
L1CAMENSG00000198910.8293.03860508.32450-0.794707.989506.97180HepG2CKAP4
L1CAMENSG00000198910.8216.296601006.95260-2.2189031.9068029.45270HepG2CNOT7
L1CAMENSG00000198910.8311.94450511.41770-0.713205.810404.33350HepG2YBX3
L1CAMENSG00000198910.83046.97420649.748302.2293022.5882021.11400HepG2CELF1
L1CAMENSG00000198910.8334.70170698.61280-1.0616018.0041016.41520HepG2DAZAP1
L1CAMENSG00000198910.8362.76900470.21380-0.374302.957002.09650HepG2DDX19B
L1CAMENSG00000198910.8371.54740546.69290-0.557204.199103.38060HepG2DDX21
L1CAMENSG00000198910.8102.56670535.00700-2.3830045.9094042.90600HepG2DDX24
L1CAMENSG00000198910.8250.19950415.93170-0.733304.792003.16090HepG2DDX27
L1CAMENSG00000198910.8216.40010336.71190-0.637803.752602.12090HepG2DDX28
L1CAMENSG00000198910.81100.291101585.45930-0.527005.670403.86090HepG2DDX47
L1CAMENSG00000198910.8998.89420469.731601.0884018.9349015.95710HepG2DDX52
L1CAMENSG00000198910.81772.53340444.596101.9951041.1291038.73600HepG2DDX55
L1CAMENSG00000198910.8209.11300713.90530-1.7714016.7875014.58650HepG2DDX59
L1CAMENSG00000198910.8327.45630514.98680-0.653204.923303.60030HepG2DDX5
L1CAMENSG00000198910.8928.33280112.320403.0469065.1837062.84460HepG2DDX6
L1CAMENSG00000198910.8179.06880484.30720-1.435408.707207.06940HepG2DHX30
L1CAMENSG00000198910.8146.64790486.41090-1.7298030.1352028.51470HepG2DKC1
L1CAMENSG00000198910.8869.55820497.768400.8047013.9150012.56970HepG2DNAJC2
L1CAMENSG00000198910.8709.67320467.142000.603204.848103.38200HepG2EFTUD2
L1CAMENSG00000198910.8761.29000503.446000.596502.307201.30240HepG2AGO1
L1CAMENSG00000198910.81117.50230517.312901.1111020.4653017.79150HepG2EIF2S2
L1CAMENSG00000198910.8851.78920454.900400.904808.826607.30420HepG2EIF3D
L1CAMENSG00000198910.8913.19630116.081302.9757052.3459049.70630HepG2EIF4B
L1CAMENSG00000198910.8207.44370689.24690-1.7323038.7319036.40060HepG2EIF4G1
L1CAMENSG00000198910.8228.32090660.25040-1.5320023.4051021.26350HepG2EIF4G2
L1CAMENSG00000198910.8195.12930590.76320-1.5981024.2644021.63020HepG2ESF1
L1CAMENSG00000198910.81047.31560725.812900.528906.828805.95410HepG2ETF1
L1CAMENSG00000198910.8417.66670879.22820-1.073907.656804.67890HepG2FASTKD1
L1CAMENSG00000198910.8700.80850520.992500.427703.130801.92040HepG2FASTKD2
L1CAMENSG00000198910.83798.33020688.698302.4633079.7544076.68970HepG2FIP1L1
L1CAMENSG00000198910.8214.08640370.03030-0.789505.262203.55700HepG2FKBP4
L1CAMENSG00000198910.8105.27370629.75520-2.5806020.6344018.08840HepG2FTO
L1CAMENSG00000198910.81058.30430120.373203.1361064.7689062.01650HepG2FXR1
L1CAMENSG00000198910.8801.08420111.540602.8443059.7458056.89440HepG2G3BP1
L1CAMENSG00000198910.81272.04180533.803501.2527018.8661016.26900HepG2GNB2L1
L1CAMENSG00000198910.8694.46660485.398100.516603.533402.43930HepG2HDGF
L1CAMENSG00000198910.8221.80720506.92260-1.192506.953205.99830HepG2HNRNPA1
L1CAMENSG00000198910.81312.48450642.057801.0314026.9758024.67050HepG2HNRNPA2B1
L1CAMENSG00000198910.8468.16850831.81200-0.829207.222604.83900HepG2HNRNPAB
L1CAMENSG00000198910.8239.20940563.88790-1.237107.048905.98390HepG2HNRNPC
L1CAMENSG00000198910.8527.21650872.24490-0.726305.481603.35890HepG2HNRNPD
L1CAMENSG00000198910.8404.587501154.37920-1.5126047.4121045.12700HepG2HNRNPF
L1CAMENSG00000198910.8334.07880113.232601.560806.407905.37560HepG2HNRNPK
L1CAMENSG00000198910.8299.74540680.09010-1.1820014.1964012.92280HepG2HNRNPLL
L1CAMENSG00000198910.8987.78000475.100201.0559017.5428015.49860HepG2HNRNPM
L1CAMENSG00000198910.8313.74350560.15760-0.836204.725903.95120HepG2HNRNPU
L1CAMENSG00000198910.8207.507501136.74550-2.4537062.6078059.98720HepG2IGF2BP1
L1CAMENSG00000198910.8297.46900114.077301.382603.599702.43510HepG2KHSRP
L1CAMENSG00000198910.8422.31080691.85320-0.712204.646503.02380HepG2KRR1
L1CAMENSG00000198910.8964.81850523.108800.8830011.047608.92790HepG2LARP7
L1CAMENSG00000198910.8785.42040549.064000.516403.697002.29080HepG2LIN28B
L1CAMENSG00000198910.8633.19350442.787900.515903.362801.59550HepG2MARK2
L1CAMENSG00000198910.81595.67940121.052103.72040109.94870106.59780HepG2MATR3
L1CAMENSG00000198910.81061.69210476.077201.1570010.785008.83690HepG2METAP2
L1CAMENSG00000198910.8426.27640557.27290-0.386602.543701.76610HepG2MSI2
L1CAMENSG00000198910.8475.87700693.61620-0.543502.455001.54640HepG2MTPAP
L1CAMENSG00000198910.8714.82180467.971500.611105.691903.95770HepG2NAA15
L1CAMENSG00000198910.8331.33670123.872601.419304.920104.08830HepG2NCBP2
L1CAMENSG00000198910.8349.42240472.96410-0.436802.870901.42530HepG2NIP7
L1CAMENSG00000198910.81360.38110692.744400.9735021.5488019.54910HepG2NOL12
L1CAMENSG00000198910.864.04330603.03410-3.2351059.8806057.31420HepG2NSUN2
L1CAMENSG00000198910.81143.45390640.608500.835803.726101.85160HepG2NUP35
L1CAMENSG00000198910.8426.94420920.47380-1.108308.673407.05910HepG2PABPC1
L1CAMENSG00000198910.8230.03610110.174301.062002.449901.76700HepG2PABPC4
L1CAMENSG00000198910.81024.40170554.422300.8856018.2496016.42940HepG2PARN
L1CAMENSG00000198910.8328.98860104.910601.6488021.4890020.05550HepG2PCBP1
L1CAMENSG00000198910.8565.88940903.09740-0.674403.904002.09140HepG2PNPT1
L1CAMENSG00000198910.844.78730417.87910-3.2219065.1313062.44520HepG2PRPF4
L1CAMENSG00000198910.81383.97260342.839202.0131044.0987041.53780HepG2PRPF8
L1CAMENSG00000198910.8732.24200106.768302.7777054.6815052.93440HepG2PTBP1
L1CAMENSG00000198910.81383.19580701.999500.9784032.2834030.70900HepG2PUM1
L1CAMENSG00000198910.8170.62360517.84450-1.6017031.7502030.08740HepG2PUS1
L1CAMENSG00000198910.81351.71030606.635801.1558029.6171028.28260HepG2RBM22
L1CAMENSG00000198910.8468.10190630.80860-0.430402.474001.54080HepG2RBM27
L1CAMENSG00000198910.81143.30960118.808003.2664019.5272018.34440HepG2NELFE
L1CAMENSG00000198910.8685.19720110.680502.6300016.2186014.92940HepG2RECQL
L1CAMENSG00000198910.8152.805401243.37710-3.0245097.5791095.06920HepG2RPLP0
L1CAMENSG00000198910.876.04270474.86700-2.642605.554504.23960HepG2RPS10
L1CAMENSG00000198910.81103.63360442.663401.3179027.0847025.48730HepG2RPS19
L1CAMENSG00000198910.8533.494201011.49780-0.922908.586307.20490HepG2RPS3A
L1CAMENSG00000198910.81260.36790593.866101.0855015.8036013.28900HepG2RPS5
L1CAMENSG00000198910.8378.72600498.82730-0.397402.048101.48070HepG2SAFB2
L1CAMENSG00000198910.8600.66550952.49120-0.665105.295103.48630HepG2SART3
L1CAMENSG00000198910.8329.72330960.67480-1.5428017.1520013.62850HepG2SBDS
L1CAMENSG00000198910.8179.87090280.00520-0.638502.601901.94760HepG2SF3A3
L1CAMENSG00000198910.8191.69170673.15150-1.8121030.3861028.34410HepG2SF3B1
L1CAMENSG00000198910.8760.90880111.127502.7754081.9896079.64820HepG2SF3B4
L1CAMENSG00000198910.8736.98300260.660201.499405.338903.21350HepG2SFPQ
L1CAMENSG00000198910.82475.69880581.686902.08940127.50390124.59840HepG2SMN1
L1CAMENSG00000198910.8578.02360240.103701.267404.590302.81000HepG2SNRNP200
L1CAMENSG00000198910.8251.51090749.00030-1.5743016.3269014.45310HepG2SNRNP70
L1CAMENSG00000198910.8101.32620685.15610-2.7574081.5461079.79840HepG2SRFBP1
L1CAMENSG00000198910.8355.34880116.006201.6149019.7263018.70580HepG2SRSF1
L1CAMENSG00000198910.8357.70460724.32290-1.017909.241807.33000HepG2SRSF3
L1CAMENSG00000198910.8998.56010652.940000.612809.693308.61560HepG2SRSF5
L1CAMENSG00000198910.8309.316201134.09970-1.8744056.0908053.85810HepG2SRSF7
L1CAMENSG00000198910.8613.9931094.388502.7014078.3889076.29560HepG2SRSF9
L1CAMENSG00000198910.811.74890594.84850-5.66190142.43850140.29500HepG2SSB
L1CAMENSG00000198910.8474.26020689.75750-0.540403.450402.03520HepG2SSRP1
L1CAMENSG00000198910.81763.68290742.564001.2479032.9967031.26280HepG2SUCLG1
L1CAMENSG00000198910.8454.91950698.46980-0.618603.860102.27710HepG2SUGP2
L1CAMENSG00000198910.8219.62790464.94390-1.0820012.8420010.93940HepG2SUPT6H
L1CAMENSG00000198910.849.97500104.30720-1.061602.491501.95570HepG2TAF15
L1CAMENSG00000198910.8173.30960662.89270-1.9354033.2091031.23440HepG2TARDBP
L1CAMENSG00000198910.8250.21340677.50480-1.437109.766007.90490HepG2TBRG4
L1CAMENSG00000198910.8664.63410296.603101.1639012.7456010.92610HepG2TFIP11
L1CAMENSG00000198910.8343.7313095.805601.8430024.8229022.37730HepG2TIA1
L1CAMENSG00000198910.8281.55440544.18450-0.950709.514008.68400HepG2TIAL1
L1CAMENSG00000198910.8897.75170549.170700.7090012.1473011.08720HepG2TRIM56
L1CAMENSG00000198910.8918.45990646.068400.507402.862601.97380HepG2TUFM
L1CAMENSG00000198910.8384.62820589.07140-0.615004.442003.65490HepG2U2AF1
L1CAMENSG00000198910.81353.84980683.862300.9852012.1589010.35670HepG2UBE2L3
L1CAMENSG00000198910.883.29000248.32070-1.5760015.4333014.03870HepG2UPF1
L1CAMENSG00000198910.8169.15350405.14100-1.260109.987908.02410HepG2UPF2
L1CAMENSG00000198910.8162.30200239.74560-0.562802.666102.07830HepG2UTP3
L1CAMENSG00000198910.8415.86160906.02140-1.1234011.534409.36510HepG2XPO5
L1CAMENSG00000198910.8920.18320531.285400.792303.007401.89970HepG2XRCC6
L1CAMENSG00000198910.8115.92270435.64370-1.9100024.1872022.14340HepG2XRN2
L1CAMENSG00000198910.8523.51430273.106800.9387014.0844013.09000HepG2ZNF622
L1CAMENSG00000198910.852.8022013.028902.018804.670203.05890K562ABCF1
L1CAMENSG00000198910.838.057304.230803.169106.208903.73960K562ADAR
L1CAMENSG00000198910.849.0748018.673301.393902.539401.99070K562AGGF1
L1CAMENSG00000198910.845.8859019.432101.239502.627901.99030K562AKAP8L
L1CAMENSG00000198910.857.7019017.038101.759804.210503.51620K562AQR
L1CAMENSG00000198910.852.4190013.799201.925404.719703.44700K562BCLAF1
L1CAMENSG00000198910.857.647809.018702.676206.362805.02970K562BOP1
L1CAMENSG00000198910.821.583004.144002.380702.891001.81000K562CCAR1
L1CAMENSG00000198910.869.6327033.110801.072402.953801.39500K562CEBPZ
L1CAMENSG00000198910.8106.0680024.865602.092703.789902.05760K562CKAP4
L1CAMENSG00000198910.8116.5400013.813603.0766013.7963011.47950K562CNOT7
L1CAMENSG00000198910.845.1834013.133501.782403.717602.42390K562CPEB4
L1CAMENSG00000198910.873.721409.588302.9426010.222508.70250K562CPSF6
L1CAMENSG00000198910.871.4104010.468802.769909.251307.17890K562CSTF2
L1CAMENSG00000198910.8124.8971023.380202.4173011.899309.95660K562CELF1
L1CAMENSG00000198910.834.8362013.599801.356902.192901.60220K562DDX47
L1CAMENSG00000198910.842.4486016.277801.382702.841201.51000K562DDX6
L1CAMENSG00000198910.844.215904.640603.252103.446401.94320K562DHX30
L1CAMENSG00000198910.851.666904.455603.535409.405507.09290K562DNAJC21
L1CAMENSG00000198910.872.5463012.709002.512908.383406.71750K562EFTUD2
L1CAMENSG00000198910.830.071204.520602.733704.175901.70400K562EIF4G1
L1CAMENSG00000198910.888.3736020.168702.131409.173406.87900K562EXOSC5
L1CAMENSG00000198910.8123.405709.758203.6606019.6495017.30760K562FMR1
L1CAMENSG00000198910.879.008308.272003.255607.490905.91240K562FTO
L1CAMENSG00000198910.855.7069012.741502.128205.206503.23120K562GEMIN5
L1CAMENSG00000198910.835.0627010.056501.801703.355702.09790K562GLRX3
L1CAMENSG00000198910.896.636809.153503.4001014.9406013.05860K562GPKOW
L1CAMENSG00000198910.8136.0270011.899803.5148018.7820016.73940K562GRSF1
L1CAMENSG00000198910.862.4075018.565301.749005.304103.83150K562HNRNPA1
L1CAMENSG00000198910.880.6285012.926002.640908.376405.81060K562HNRNPAB
L1CAMENSG00000198910.868.4740020.556601.735905.251504.00560K562HNRNPU
L1CAMENSG00000198910.897.1358038.065301.351404.714002.34680K562IGF2BP1
L1CAMENSG00000198910.838.6707013.806901.485802.390701.45720K562IGF2BP2
L1CAMENSG00000198910.863.0707012.604502.322905.866903.74630K562ILF2
L1CAMENSG00000198910.842.076604.181603.330807.833105.39230K562KHDRBS1
L1CAMENSG00000198910.873.798407.818503.2385010.037808.13850K562KRR1
L1CAMENSG00000198910.847.040308.935202.396205.445904.19130K562METAP2
L1CAMENSG00000198910.864.0032020.262401.659204.038002.67290K562MSI2
L1CAMENSG00000198910.884.4003010.573702.9967012.5161010.94240K562MTPAP
L1CAMENSG00000198910.8102.4085011.745203.1241016.1287014.53300K562NSUN2
L1CAMENSG00000198910.8136.6477013.270803.3640010.052507.71060K562PABPC1
L1CAMENSG00000198910.837.414804.156203.170206.562603.29370K562PARN
L1CAMENSG00000198910.8113.1527025.654302.140908.364306.92150K562PCBP3
L1CAMENSG00000198910.875.4897019.676501.939706.058104.87630K562POLR2G
L1CAMENSG00000198910.840.024009.675302.048403.907702.80530K562PSIP1
L1CAMENSG00000198910.8105.7629021.615702.2906010.205508.33880K562PUM2
L1CAMENSG00000198910.866.1772019.259601.780705.193004.47840K562PUS1
L1CAMENSG00000198910.835.9941013.486101.416202.510701.71330K562RBM22
L1CAMENSG00000198910.885.0459012.581902.756809.721606.82400K562SBDS
L1CAMENSG00000198910.8189.6891011.594104.0321015.4376013.62290K562SF3A3
L1CAMENSG00000198910.859.322008.708802.767902.441501.53300K562SF3B1
L1CAMENSG00000198910.848.7934014.174301.783302.532001.30550K562SFPQ
L1CAMENSG00000198910.864.993604.561703.8326012.9093010.43750K562SLBP
L1CAMENSG00000198910.849.4364012.348102.001204.605602.43820K562SRP68
L1CAMENSG00000198910.869.9662033.952501.043002.417401.32640K562SRSF7
L1CAMENSG00000198910.844.8504011.239101.996504.101302.52360K562STAU1
L1CAMENSG00000198910.854.3535012.313602.142004.597602.48090K562STIP1
L1CAMENSG00000198910.879.8171011.976202.736409.740407.77200K562SUPV3L1
L1CAMENSG00000198910.848.0926010.915902.139303.477501.59200K562TFIP11
L1CAMENSG00000198910.855.908109.306102.586704.907503.63040K562TIAL1
L1CAMENSG00000198910.848.979009.886402.308502.976001.98710K562TRIM56
L1CAMENSG00000198910.841.2593010.951901.913403.746102.06690K562TRIP6
L1CAMENSG00000198910.8104.7403012.674303.046706.496204.86220K562UCHL5
L1CAMENSG00000198910.8103.4536012.454003.0542016.0878014.51830K562UPF1
L1CAMENSG00000198910.885.3948019.539002.127707.487905.08380K562UTP18
L1CAMENSG00000198910.872.7033012.533902.536108.410606.42050K562UTP3
L1CAMENSG00000198910.862.9156010.656102.561608.648907.06550K562WDR3
L1CAMENSG00000198910.832.4188011.083801.548302.621901.79720K562WDR43
L1CAMENSG00000198910.858.6354020.211401.536504.122102.54140K562WRN
L1CAMENSG00000198910.863.9944012.904502.310006.914704.73360K562XRN2
L1CAMENSG00000198910.8103.4746019.181902.431408.837707.16980K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for L1CAM is not available on ENCORE database.





2 RBPs can affect the splicing of L1CAM :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEL1CAMENSG00000198910.8chrX-153129337153129472153128931153129004153129776153129932-0.210000.001800.09231excludedHepG2RBM22
SEL1CAMENSG00000198910.8chrX-1531293371531294721531289311531290041531297761531299320.265000.001260.05366includedHepG2SFPQ

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for L1CAM is not avaliable on ENCORE database.