KDM3A

General Information

Gene Name       : KDM3A
Gene ID             : ENSG00000115548.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: KDM3A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878KDM3AENSG00000115548.169.857.708.78ENCSR000AEF
HepG2KDM3AENSG00000115548.1627.6436.2531.95ENCSR985KAT
K562KDM3AENSG00000115548.1616.9617.9517.45ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for KDM3A is not avaliable on ENCORE database.



Proteins bound to RNA
  • KDM3A RNA is bound by 49 proteins.  







eCLIP assay for KDM3A is not avaliable on ENCORE database.





49 proteins are bound to KDM3A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr28671285186712904+3'-UTR,CDS,intron-Proximal3.135007.49108HepG2BCLAF1
chr28670522386705275+3'-UTR,intron-Proximal5.590318.03507K562AQR
chr28670958886709597+3'-UTR,CDS3.673843.57857HepG2BCLAF1
chr28671812986718180+3'-UTR,CDS3.201565.57447HepG2GRWD1
chr28670727586707354+3'-UTR,CDS,intron-Proximal3.8379014.06246K562BUD13
chr28670971286709818+3'-UTR,CDS,intron-Proximal3.505855.05222K562IGF2BP1
chr28671296686713017+3'-UTR,CDS,intron-Proximal5.157478.38577HepG2PRPF8
chr28671939686719425+3'-UTR5.4606029.25937K562PUM2
chr28671934286719459+3'-UTR3.559823.68079HepG2FUBP3
chr28670529286705344+3'-UTR,CDS,intron-Proximal4.624079.80377HepG2BCLAF1
chr28671279686712893+3'-UTR,CDS,intron-Proximal3.346819.27296K562SF3B4
chr28670961086709650+3'-UTR,CDS3.404004.30677K562YBX3
chr28671659186716650+3'-UTR,CDS,intron-Proximal6.1508939.02525K562SF3B4
chr28671934086719387+3'-UTR3.308743.31157HepG2KHSRP
chr28671670786716787+3'-UTR,CDS,intron-Proximal3.777575.91846K562GRWD1
chr28671297086713015+3'-UTR,CDS,intron-Proximal4.932395.50285K562PRPF8
chr28671938786719471+3'-UTR3.574007.70106HepG2KHSRP
chr28670646286706512+3'-UTR,intron-Distal3.212744.10408K562KHSRP
chr28671215086712200+3'-UTR,CDS,intron-Proximal3.936597.53394K562AQR
chr28671644886716565+3'-UTR,CDS,intron-Proximal3.4197420.65922HepG2BCLAF1
chr28670623886706284+3'-UTR,intron-Distal3.043493.29213HepG2KHSRP
chr28670574386705845+3'-UTR,CDS3.616243.23099HepG2UCHL5
chr28671828786718330+3'-UTR,CDS3.193596.09950HepG2BCLAF1
chr28671970186719780+3'-UTR3.393864.17167HepG2ZC3H11A
chr28671660586716665+3'-UTR,CDS,intron-Proximal3.5763318.85322K562EFTUD2
chr28670915386709202+3'-UTR,CDS4.6390710.47008HepG2BCLAF1
chr28671916086719204+3'-UTR,CDS,intron-Proximal4.072483.25872K562IGF2BP1
chr28670528786705362+3'-UTR,CDS,intron-Proximal4.453819.52818K562BUD13
chr28671668486716744+3'-UTR,CDS4.5853313.32408HepG2BCLAF1
chr28671827886718402+3'-UTR,CDS,intron-Proximal4.005104.66091K562PUM1
chr28670966186709701+3'-UTR,CDS3.764967.23562HepG2BCLAF1
chr28671110986711135+3'-UTR,CDS,intron-Proximal3.719567.71102K562ZNF622
chr28671805986718129+3'-UTR,CDS3.746416.84754HepG2GRWD1
chr28671838186718450+3'-UTR,CDS,intron-Proximal4.272783.93614HepG2AQR
chr28671284886712920+3'-UTR,CDS,intron-Proximal3.603037.75193HepG2GRWD1
chr28671800386718064+3'-UTR,CDS,intron-Proximal4.094796.22817K562DDX24
chr28671801286718046+3'-UTR,CDS4.175418.08603HepG2BCLAF1
chr28671201186712080+3'-UTR,CDS,intron-Proximal3.700715.37841K562SF3B4
chr28671933786719396+3'-UTR6.1365378.29263K562PUM2
chr28671933686719390+3'-UTR4.115764.24698K562IGF2BP1
chr28671942586719473+3'-UTR4.4435518.85164K562PUM2
chr28671921386719325+3'-UTR,CDS3.3933114.45635HepG2BCLAF1
chr28671949586719662+3'-UTR4.1660917.54430K562IGF2BP1
chr28670523886705290+3'-UTR,intron-Proximal4.969065.02942K562EFTUD2
chr28671110886711147+3'-UTR,CDS,intron-Proximal3.606888.38234K562UCHL5
chr28671664186716684+3'-UTR,CDS,intron-Proximal3.045146.80151HepG2BCLAF1
chr28671800286718012+3'-UTR,CDS,intron-Proximal5.516408.40988HepG2BCLAF1
chr28671104286711143+3'-UTR,CDS,intron-Proximal3.159734.40428HepG2BUD13
chr28670972486709795+3'-UTR,CDS3.802409.21338K562RBM15
chr28671829086718399+3'-UTR,CDS,intron-Proximal3.424764.58595K562SND1
chr28671674486716785+3'-UTR,CDS,intron-Proximal6.2718818.15906HepG2BCLAF1
chr28671284986712941+3'-UTR,CDS,intron-Proximal3.687685.79114K562LIN28B
chr28671285286712907+3'-UTR,CDS3.910023.42508HepG2EIF3D
chr28671812286718183+3'-UTR,CDS,intron-Proximal4.2131415.57891HepG2BCLAF1
chr28671827086718356+3'-UTR,CDS4.706214.40915HepG2ZNF800
chr28670957786709608+3'-UTR,CDS,intron-Proximal3.199454.56061K562BUD13
chr28671808286718118+3'-UTR,CDS3.376693.99908K562BUD13
chr28671937986719477+3'-UTR3.227473.00452K562NOLC1
chr28670981386709894+3'-UTR,CDS,intron-Proximal4.9936112.17654K562AQR
chr28671110886711161+3'-UTR,CDS,intron-Proximal3.1653010.62277HepG2BCLAF1
chr28670571686705752+3'-UTR,CDS,intron-Proximal3.351885.85200K562BUD13
chr28671282386712905+3'-UTR,CDS,intron-Proximal3.021709.92220K562BUD13
chr28670580886705861+3'-UTR,CDS,intron-Proximal3.600669.83277HepG2BCLAF1
chr28671826386718286+3'-UTR,CDS,intron-Proximal3.703706.36847HepG2BCLAF1
chr28670910386709150+3'-UTR,CDS3.580347.58656HepG2BCLAF1
chr28671833286718399+3'-UTR,CDS,intron-Proximal3.328133.34065K562IGF2BP1
chr28670529286705351+3'-UTR,CDS,intron-Proximal3.574594.72530HepG2G3BP1
chr28670971486709783+3'-UTR,CDS3.3955911.17783HepG2BCLAF1
chr28670587186705973+3'-UTR,intron-Distal,intron-Proximal4.3265712.94987K562KHSRP
chr28670978786709839+3'-UTR,CDS,intron-Proximal4.172743.38484HepG2CDC40
chr28671648986716562+3'-UTR,CDS,intron-Proximal3.019456.49271HepG2GRWD1
chr28671937586719470+3'-UTR5.9864612.72366HepG2SUB1
chr28670979486709872+3'-UTR,CDS,intron-Proximal4.078236.50179HepG2BUD13
chr28671811386718171+3'-UTR,CDS3.669925.90074K562PUM2
chr28671972386719763+3'-UTR4.538128.61496K562PUM2
chr28671650586716565+3'-UTR,CDS,intron-Proximal3.715894.13746HepG2PPIG
chr28670978386709804+3'-UTR,CDS3.550898.99805HepG2BCLAF1
chr28671946586719700+3'-UTR3.538644.95875K562IGF2BP2
chr28670519586705271+3'-UTR,intron-Proximal3.444134.72639K562KHSRP
chr28670586186705905+3'-UTR,intron-Proximal5.027316.44303K562AQR
chr28671649686716559+3'-UTR,CDS3.139415.98642K562DDX24
chr28671672186716785+3'-UTR,CDS,intron-Proximal4.2452310.09214K562DDX24
chr28670572986705795+3'-UTR,CDS,intron-Proximal3.354963.32039HepG2PPIG
chr28671282186712889+3'-UTR,CDS,intron-Proximal3.819366.80869K562AQR
chr28670728786707315+3'-UTR,CDS,intron-Proximal3.671636.36847HepG2BCLAF1
chr28670920286709223+3'-UTR,CDS3.961595.06180HepG2BCLAF1
chr28670958186709635+3'-UTR,CDS3.383454.06531HepG2GRWD1
chr28670573686705784+3'-UTR,CDS4.082724.50960HepG2GRWD1
chr28671678086716827+3'-UTR,CDS,intron-Proximal3.992115.83621K562AQR
chr28670748486707538+3'-UTR,CDS,intron-Proximal3.837699.04524K562AQR
chr28670978086709819+3'-UTR,CDS,intron-Proximal3.726119.57546K562ZNF622
chr28666857486668606+5'-UTR,intron-Distal,intron-Proximal4.4073712.88561HepG2AQR
chr28666856486668614+5'-UTR,intron-Distal,intron-Proximal3.691098.16221HepG2PRPF8
chr28666850986668572+5'-UTR,intron-Distal,intron-Proximal4.033955.47892K562DDX3X
chr28666913386669165+5'-UTR,intron-Proximal4.780036.01989HepG2PRPF8
chr28666913886669199+5'-UTR,CDS,intron-Proximal4.118505.48791HepG2DDX3X
chr28666913186669203+5'-UTR,CDS,intron-Proximal3.088326.76881K562BUD13
chr28666908986669119+5'-UTR,intron-Proximal4.823594.65563K562AQR
chr28666913986669186+5'-UTR,CDS,intron-Proximal4.466294.92499HepG2AQR
chr28666914386669189+5'-UTR,CDS4.548265.29868K562UCHL5
chr28666858286668648+5'-UTR,intron-Distal,intron-Proximal4.920719.43690HepG2BUD13
chr28666856686668574+5'-UTR,intron-Distal,intron-Proximal4.2973811.10181HepG2AQR
chr28666851686668596+5'-UTR,intron-Distal,intron-Proximal3.238716.17297HepG2PRPF4
chr28666856086668643+5'-UTR,intron-Distal,intron-Proximal4.810134.84986K562GTF2F1
chr28666854986668599+5'-UTR,intron-Distal,intron-Proximal3.620805.93066K562GEMIN5
chr28666856786668608+5'-UTR,intron-Distal,intron-Proximal4.574109.29543K562AQR
chr28670209286702114+CDS,intron-Proximal3.006185.17928K562YBX3
chr28670186886701964+CDS,intron-Proximal3.654437.15738HepG2U2AF2
chr28670190886701986+CDS3.426149.03865HepG2BCLAF1
chr28668224886682313+CDS,intron-Proximal4.0936114.48007HepG2BCLAF1
chr28669731586697378+CDS,intron-Proximal3.660965.00298K562U2AF2
chr28668355786683605+CDS,intron-Proximal3.276643.41438K562BUD13
chr28670513886705186+CDS,intron-Proximal3.507055.62662K562BUD13
chr28667830186678337+CDS,intron-Proximal3.227729.93919HepG2BCLAF1
chr28666921786669326+CDS4.150498.34313K562DDX6
chr28669740686697472+CDS3.256426.78413K562ZNF622
chr28668397686684038+CDS,intron-Proximal4.232513.25089HepG2AQR
chr28669116886691219+CDS,intron-Proximal4.2851213.11193K562SF3B4
chr28669369286693813+CDS3.599783.40366HepG2UCHL5
chr28669127986691332+CDS3.005163.47879HepG2PPIG
chr28668414486684223+CDS,intron-Proximal4.648514.68690HepG2PRPF8
chr28670187886701958+CDS,intron-Proximal3.147886.41055K562U2AF2
chr28666921186669260+CDS3.752906.93069K562GEMIN5
chr28669121386691273+CDS3.391593.77784K562RBM15
chr28669351286693580+CDS4.119349.98400HepG2BCLAF1
chr28668228986682347+CDS,intron-Proximal4.227636.40042K562EFTUD2
chr28670503786705109+CDS3.859806.23335HepG2GRWD1
chr28669111886691208+CDS,intron-Proximal4.759604.28193HepG2AQR
chr28670499986705154+CDS,intron-Proximal3.540428.05055K562FXR2
chr28669127786691337+CDS3.176666.80151HepG2BCLAF1
chr28667689586676973+CDS,intron-Distal,intron-Proximal4.304325.66810K562U2AF2
chr28669112586691202+CDS,intron-Proximal4.085746.98063HepG2SF3A3
chr28667699186677087+CDS,intron-Distal,intron-Proximal3.618103.48848HepG2FXR2
chr28670503786705128+CDS3.682707.42785K562FMR1
chr28670499186705040+CDS,intron-Proximal4.158816.80028K562GPKOW
chr28667693186677002+CDS,intron-Distal3.096535.77687HepG2PPIG
chr28670510486705153+CDS,intron-Proximal3.372827.74581HepG2BCLAF1
chr28667693486677021+CDS,intron-Distal3.8436115.00162HepG2BCLAF1
chr28670514886705189+CDS,intron-Proximal4.332274.27476HepG2AQR
chr28666920186669263+CDS3.279347.48648HepG2PRPF4
chr28669387086694007+CDS,intron-Distal,intron-Proximal3.2090814.76970HepG2BCLAF1
chr28669729886697362+CDS,intron-Proximal3.407826.15340HepG2AQR
chr28668220786682248+CDS,intron-Proximal3.018918.01569HepG2BCLAF1
chr28669349786693578+CDS3.204285.18023HepG2GRWD1
chr28668368586683689+CDS3.132496.56754K562YBX3
chr28669121686691277+CDS3.297733.71253K562LIN28B
chr28668401286684160+CDS,intron-Proximal4.0857016.92245K562EFTUD2
chr28670195286702114+CDS,intron-Proximal3.232354.08504HepG2G3BP1
chr28668367386683682+CDS3.262207.65762K562YBX3
chr28670500686705059+CDS4.182493.93614HepG2AQR
chr28668357786683681+CDS3.831376.91167HepG2GRWD1
chr28668392786683944+CDS,intron-Proximal3.473668.64138K562YBX3
chr28669741186697461+CDS3.419603.64266HepG2PPIG
chr28668368886683695+CDS,intron-Proximal3.834485.35619K562AQR
chr28666934986669398+CDS,intron-Proximal5.4337416.49005HepG2PRPF8
chr28670494786705036+CDS,intron-Proximal3.253305.07422K562SF3B4
chr28670499886705032+CDS,intron-Proximal3.258415.27152HepG2BCLAF1
chr28669740286697458+CDS3.684377.42278HepG2BCLAF1
chr28670189786701969+CDS,intron-Proximal3.0611811.45154K562ZNF622
chr28669125386691337+CDS3.239358.40639K562YBX3
chr28668230986682316+CDS,intron-Proximal3.256446.62672K562AQR
chr28668229186682367+CDS,intron-Proximal5.070217.96842K562PRPF8
chr28669116986691211+CDS,intron-Proximal4.163953.82843HepG2PPIG
chr28668404886684135+CDS,intron-Proximal3.817398.47924K562SF3B4
chr28669752986697582+CDS,intron-Proximal3.753898.67867K562AQR
chr28669400586694014+CDS,intron-Distal,intron-Proximal4.328648.79285K562AQR
chr28668228886682369+CDS,intron-Proximal3.090903.60519K562BUD13
chr28669369486693771+CDS4.196323.81265K562MTPAP
chr28668356486683593+CDS,intron-Proximal3.342126.19339HepG2BCLAF1
chr28670199986702115+CDS,intron-Proximal3.0888712.45342HepG2BCLAF1
chr28669743086697530+CDS4.264724.35343K562SRSF1
chr28667702186677083+CDS,intron-Distal4.3262612.93761HepG2BCLAF1
chr28669390686694030+CDS,intron-Distal,intron-Proximal3.710314.80676K562RBM15
chr28666992686669999+intron-Distal4.808704.12563HepG2EXOSC5
chr28666991286669973+intron-Distal3.068453.14999K562EXOSC5
chr28670547786705528+intron-Distal,intron-Proximal3.308593.48890K562KHSRP
chr28669402586694047+intron-Distal,intron-Proximal5.892349.41643K562AQR
chr28670051086700565+intron-Distal3.051503.09653HepG2ILF3
chr28666870586668758+intron-Distal,intron-Proximal3.751425.81804K562BUD13
chr28666868986668779+intron-Distal,intron-Proximal3.046153.94332HepG2FAM120A
chr28670298686703074+intron-Distal3.714335.08047HepG2QKI
chr28666953286669560+intron-Distal3.482414.28420HepG2HNRNPM
chr28666867786668779+intron-Distal,intron-Proximal4.5243210.15746HepG2PRPF4
chr28669084786690910+intron-Distal3.119493.29213HepG2KHSRP
chr28670058586700703+intron-Distal4.623593.77753HepG2ILF3
chr28666987486669941+intron-Distal3.527713.42785HepG2HNRNPM
chr28668575086685880+intron-Distal4.102143.34098HepG2HNRNPM
chr28668382086683898+intron-Distal,intron-Proximal3.231355.42680K562KHSRP
chr28671303286713105+intron-Distal,intron-Proximal3.870743.22073HepG2KHSRP
chr28666868686668776+intron-Distal,intron-Proximal4.263383.29554HepG2GTF2F1
chr28666871986668759+intron-Distal4.378834.59919HepG2AQR
chr28671303886713104+intron-Distal,intron-Proximal4.3483113.03519K562CSTF2T
chr28666870686668753+intron-Distal,intron-Proximal3.181135.90285HepG2PRPF8
chr28666870886668778+intron-Distal,intron-Proximal4.178466.75344HepG2EFTUD2
chr28666867886668782+intron-Distal,intron-Proximal3.356318.62138HepG2XPO5
chr28666867786668768+intron-Distal,intron-Proximal3.5929310.82062K562AQR
chr28670002186700117+intron-Distal3.966073.28841HepG2PTBP1
chr28670932886709421+intron-Distal4.2026512.89733K562EFTUD2
chr28669105186691108+intron-Distal,intron-Proximal4.270828.34041K562KHSRP
chr28668339586683458+intron-Distal3.090073.90146K562KHSRP
chr28667838386678437+intron-Distal,intron-Proximal5.100585.43043K562EFTUD2
chr28670926486709328+intron-Distal,intron-Proximal5.812597.84667K562EFTUD2
chr28669616386696244+intron-Distal4.142037.55717HepG2PTBP1
chr28668852286688629+intron-Distal3.338824.08064K562KHSRP
chr28669062186690676+intron-Distal3.105614.18806HepG2U2AF2
chr28667806286678108+intron-Distal4.038093.89294K562KHSRP
chr28666868786668776+intron-Distal,intron-Proximal4.832835.19274K562XRN2
chr28667259786672736+intron-Distal3.218624.30137HepG2PTBP1
chr28666992686670038+intron-Distal4.636646.83853HepG2PRPF4
chr28670046686700556+intron-Distal3.305623.59765K562ILF3
chr28671304086713090+intron-Distal,intron-Proximal5.2006416.93173K562FMR1
chr28666899386669050+intron-Distal,intron-Proximal4.682494.62947HepG2AQR
chr28666861486668643+intron-Distal,intron-Proximal4.607704.02817HepG2PRPF8
chr28671138586711439+intron-Distal4.724547.63242K562EFTUD2
chr28671129486711361+intron-Proximal4.027314.98250K562AQR
chr28668369586683732+intron-Proximal4.011875.83621K562AQR
chr28668231686682344+intron-Proximal3.907519.30654K562AQR
chr28671130786711357+intron-Proximal3.172653.17613K562BUD13
chr28669112486691168+intron-Proximal5.2981819.10916K562SF3B4
chr28668216086682206+intron-Proximal5.921267.91936K562SF3B4
chr28666907086669115+intron-Proximal4.021536.78984HepG2AQR
chr28670213286702212+intron-Proximal3.953185.55177K562PRPF8
chr28671658786716634+intron-Proximal4.091263.82050HepG2SF3B4
chr28671659186716634+intron-Proximal6.017607.41664HepG2EFTUD2
chr28670952586709579+intron-Proximal4.384478.75853K562SF3B4
chr28671656886716605+intron-Proximal5.7130617.70008K562EFTUD2
chr28671130386711358+intron-Proximal5.432637.41664HepG2EFTUD2
chr28671840886718472+intron-Proximal5.182907.58908K562PRPF8
chr28668234486682352+intron-Proximal5.2570210.08262K562AQR
chr28671130486711376+intron-Proximal4.2846311.51837K562EFTUD2
chr28670214286702181+intron-Proximal4.232095.42080K562EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for KDM3A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for KDM3A is not available on ENCORE database.

  • 145 RBPs can affect the levels of KDM3A.  








The Knockdown/knockout RNA-Seq assay for KDM3A is not available on ENCORE database.





145 RBPs can affect the gene expression of KDM3A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
KDM3AENSG00000115548.122863.124103195.16060-0.158301.871101.35320HepG2ACO1
KDM3AENSG00000115548.122460.430403214.98490-0.385902.931901.86410HepG2AKAP8
KDM3AENSG00000115548.123773.608103209.875300.233303.219202.39910HepG2AKAP8L
KDM3AENSG00000115548.124216.229303095.833500.4455010.340709.15260HepG2AUH
KDM3AENSG00000115548.122286.345201633.570100.484904.467803.72840HepG2BOP1
KDM3AENSG00000115548.122479.168703194.10900-0.365607.668106.66650HepG2CKAP4
KDM3AENSG00000115548.122094.986001499.640100.482203.580602.80920HepG2CPSF6
KDM3AENSG00000115548.123287.384803917.56890-0.253003.480002.77640HepG2CELF1
KDM3AENSG00000115548.122410.449902954.90160-0.293804.770003.71390HepG2DDX19B
KDM3AENSG00000115548.121976.645203047.03340-0.624409.642508.45670HepG2DDX21
KDM3AENSG00000115548.124116.291702982.242600.464807.040605.59660HepG2DDX24
KDM3AENSG00000115548.122389.772901702.973400.488702.263101.38230HepG2DDX59
KDM3AENSG00000115548.124695.330603249.099500.531104.930704.12710HepG2DDX6
KDM3AENSG00000115548.122259.626403056.81050-0.435906.024805.09860HepG2DKC1
KDM3AENSG00000115548.122357.683202878.33050-0.287903.756002.94530HepG2DNAJC21
KDM3AENSG00000115548.122079.260802852.96870-0.4564012.4946011.21440HepG2DNAJC2
KDM3AENSG00000115548.121602.143702925.34400-0.8686014.0658012.23540HepG2EEF2
KDM3AENSG00000115548.121578.558302438.81300-0.627607.740605.89100HepG2EFTUD2
KDM3AENSG00000115548.122037.033602513.37020-0.303203.119701.87480HepG2EIF2S2
KDM3AENSG00000115548.121401.805602374.78860-0.760509.755808.16420HepG2EIF3D
KDM3AENSG00000115548.122528.070203452.01980-0.449403.490202.77390HepG2EIF4A3
KDM3AENSG00000115548.124878.313904155.756400.231203.379902.47010HepG2EIF4G1
KDM3AENSG00000115548.122365.152203121.92570-0.400504.843803.74440HepG2EWSR1
KDM3AENSG00000115548.122313.778903345.90020-0.532105.131304.11240HepG2FIP1L1
KDM3AENSG00000115548.123185.100302106.440600.596409.535608.12160HepG2FUBP3
KDM3AENSG00000115548.122112.118603579.21400-0.761004.210502.84680HepG2FUS
KDM3AENSG00000115548.121459.013902114.46070-0.535305.927904.61250HepG2GEMIN5
KDM3AENSG00000115548.122190.960002980.35780-0.443902.654901.56700HepG2GRSF1
KDM3AENSG00000115548.122202.588403371.76130-0.614303.060201.39920HepG2GTF2F1
KDM3AENSG00000115548.122520.316703050.24700-0.275304.041002.87480HepG2HDGF
KDM3AENSG00000115548.121786.356402722.79000-0.608104.782602.93950HepG2HNRNPA0
KDM3AENSG00000115548.121772.040602905.90630-0.7136012.3756011.16800HepG2HNRNPA1
KDM3AENSG00000115548.123312.315603871.32530-0.225002.905001.95050HepG2HNRNPA2B1
KDM3AENSG00000115548.121808.190102658.79940-0.556204.535402.72520HepG2HNRNPAB
KDM3AENSG00000115548.121515.257902788.71040-0.880009.356906.73650HepG2HNRNPD
KDM3AENSG00000115548.124270.034203271.238400.384303.925703.10720HepG2HNRNPK
KDM3AENSG00000115548.123322.506003837.28400-0.207803.605802.84250HepG2HNRNPL
KDM3AENSG00000115548.122787.099201622.145100.7808011.5997010.42270HepG2HNRNPLL
KDM3AENSG00000115548.121540.450202308.28460-0.583509.098807.54320HepG2HNRNPM
KDM3AENSG00000115548.121967.975903210.93030-0.7063023.4522021.82210HepG2HNRNPU
KDM3AENSG00000115548.122183.504303501.47970-0.681306.684004.81160HepG2HSPD1
KDM3AENSG00000115548.122211.823701838.745400.266402.319201.65460HepG2IGF2BP1
KDM3AENSG00000115548.122271.685203279.85590-0.5299018.7461017.03020HepG2ILF2
KDM3AENSG00000115548.121813.273303138.68650-0.791607.307905.08680HepG2ILF3
KDM3AENSG00000115548.121318.634903068.10380-1.2183019.2949016.04060HepG2KHDRBS1
KDM3AENSG00000115548.122691.490804861.86150-0.8531010.263808.66880HepG2LARP4
KDM3AENSG00000115548.121779.138602957.78180-0.733307.522405.71950HepG2LARP7
KDM3AENSG00000115548.121896.348603106.62300-0.712106.265604.46820HepG2LIN28B
KDM3AENSG00000115548.121927.395202968.11430-0.622904.879302.67850HepG2LSM11
KDM3AENSG00000115548.122045.210203483.92460-0.7685010.734309.46740HepG2MAGOH
KDM3AENSG00000115548.122269.903903503.46170-0.626106.628905.68410HepG2MATR3
KDM3AENSG00000115548.121200.470902485.47390-1.0499010.448708.53120HepG2METAP2
KDM3AENSG00000115548.121880.804402707.56710-0.525607.818506.52280HepG2MSI2
KDM3AENSG00000115548.122007.474702674.58930-0.413902.965801.50410HepG2NIP7
KDM3AENSG00000115548.122348.701603317.79020-0.498403.320701.74380HepG2NKRF
KDM3AENSG00000115548.122957.482004177.07730-0.498109.486608.10030HepG2NOL12
KDM3AENSG00000115548.122450.816601438.473800.7686011.9171010.46730HepG2NSUN2
KDM3AENSG00000115548.12812.529501775.41320-1.1277010.897108.07720HepG2PA2G4
KDM3AENSG00000115548.123954.646703193.725400.308202.231301.57810HepG2PABPC4
KDM3AENSG00000115548.122603.114703178.24850-0.288004.380303.34400HepG2PARN
KDM3AENSG00000115548.121177.477801963.88000-0.7380011.590009.28890HepG2PKM
KDM3AENSG00000115548.122383.791702863.89010-0.264703.139102.35850HepG2PPIL4
KDM3AENSG00000115548.122588.301301788.942400.5328012.0124010.56670HepG2PRPF4
KDM3AENSG00000115548.123199.817203987.34990-0.317403.303702.66070HepG2PUF60
KDM3AENSG00000115548.121960.687604232.70570-1.1102078.0787075.85250HepG2PUM1
KDM3AENSG00000115548.122256.592403254.42610-0.5283015.1492013.91160HepG2PUS1
KDM3AENSG00000115548.124890.962003555.697300.459908.861807.84150HepG2QKI
KDM3AENSG00000115548.121404.547401967.71910-0.486404.010501.90280HepG2RBM14
KDM3AENSG00000115548.124989.629603227.170200.6286012.2832010.92440HepG2RBM25
KDM3AENSG00000115548.121960.504103566.48300-0.863307.903306.21980HepG2RBM27
KDM3AENSG00000115548.122262.060403109.58280-0.459102.942901.35030HepG2RBM47
KDM3AENSG00000115548.121116.279302310.72330-1.0496025.1700023.62230HepG2RPS19
KDM3AENSG00000115548.122294.317803289.45590-0.519803.070102.22750HepG2RPS2
KDM3AENSG00000115548.122201.158603233.22150-0.554704.290103.29400HepG2RPS3A
KDM3AENSG00000115548.122351.678802859.46470-0.282104.839104.02700HepG2SAFB2
KDM3AENSG00000115548.121706.301402319.25080-0.442804.075602.94000HepG2SERBP1
KDM3AENSG00000115548.122593.359201605.498400.691704.765003.85980HepG2SF3B1
KDM3AENSG00000115548.124311.498903823.160200.173302.603701.92080HepG2SLBP
KDM3AENSG00000115548.121978.356403334.60100-0.7532035.5675033.70880HepG2SMN1
KDM3AENSG00000115548.122477.531201786.436100.471702.694701.92370HepG2SNRNP70
KDM3AENSG00000115548.125264.530703355.438500.6497026.5003025.36230HepG2SRFBP1
KDM3AENSG00000115548.121886.007903567.98920-0.9198026.0823024.95240HepG2SRSF1
KDM3AENSG00000115548.123080.774403936.87650-0.353806.991506.06040HepG2SRSF5
KDM3AENSG00000115548.124582.530002902.863800.6586025.2588023.90490HepG2SRSF9
KDM3AENSG00000115548.123177.835504477.35660-0.4946013.5644012.35850HepG2SUCLG1
KDM3AENSG00000115548.122590.865103531.79300-0.447003.033301.63860HepG2SUGP2
KDM3AENSG00000115548.122224.662103425.72520-0.622802.744601.68150HepG2TBRG4
KDM3AENSG00000115548.121401.120103119.95050-1.1549038.4626036.99490HepG2TIAL1
KDM3AENSG00000115548.122495.729803147.91390-0.334905.213204.48890HepG2TRIM56
KDM3AENSG00000115548.121284.630601887.08630-0.554804.517202.51360HepG2TROVE2
KDM3AENSG00000115548.123189.791003895.40290-0.288303.036002.11690HepG2TUFM
KDM3AENSG00000115548.123338.766104123.17730-0.304402.192701.45220HepG2UBE2L3
KDM3AENSG00000115548.12800.100001402.62380-0.809904.053303.13470HepG2UCHL5
KDM3AENSG00000115548.122043.817503383.36460-0.7272012.4197011.29050HepG2UTP3
KDM3AENSG00000115548.122002.224001765.410300.181502.119101.51950HepG2ZC3H8
KDM3AENSG00000115548.125264.571303436.305300.615403.974602.48650K562ABCF1
KDM3AENSG00000115548.125618.521403079.183600.8675021.5573020.08360K562AGGF1
KDM3AENSG00000115548.124885.460303383.833000.529702.610401.66220K562AKAP8
KDM3AENSG00000115548.126841.644103204.097901.0943031.3105028.68330K562AKAP8L
KDM3AENSG00000115548.123518.496105239.93140-0.574607.310005.19140K562APOBEC3C
KDM3AENSG00000115548.128378.123304970.296200.753206.873506.01580K562AQR
KDM3AENSG00000115548.123593.452203025.888800.247903.216301.78290K562BCCIP
KDM3AENSG00000115548.124935.674802473.387600.9967020.7065018.35020K562BOP1
KDM3AENSG00000115548.123856.083502394.007100.687604.120202.32300K562BUD13
KDM3AENSG00000115548.123950.516203178.847300.313404.160902.29850K562CEBPZ
KDM3AENSG00000115548.125655.787704249.179000.412403.406301.78050K562CKAP4
KDM3AENSG00000115548.125470.736303810.340100.521702.949101.84690K562CNOT7
KDM3AENSG00000115548.123817.536902629.738900.537609.155807.71030K562CPSF6
KDM3AENSG00000115548.122694.442702218.168100.280503.126201.99620K562CSTF2
KDM3AENSG00000115548.129707.194607302.375500.410606.739805.23470K562CELF1
KDM3AENSG00000115548.125067.077703612.730500.488004.156802.33790K562DDX19B
KDM3AENSG00000115548.124335.113903447.413700.330502.489501.66440K562DKC1
KDM3AENSG00000115548.123442.848502553.982900.430802.939701.61660K562EEF2
KDM3AENSG00000115548.123138.977302467.506100.347103.082002.11580K562EFTUD2
KDM3AENSG00000115548.121029.268501421.61520-0.465902.305701.39680K562EIF3A
KDM3AENSG00000115548.121773.181702151.47420-0.279002.820302.01710K562EIF3G
KDM3AENSG00000115548.123878.413802627.752400.561503.016501.31950K562ESF1
KDM3AENSG00000115548.123401.222102470.813200.461002.208801.45040K562FIP1L1
KDM3AENSG00000115548.122653.549502028.620400.387303.145001.92740K562FKBP4
KDM3AENSG00000115548.123875.102702676.048800.534002.667201.82810K562FMR1
KDM3AENSG00000115548.123499.493102268.345600.625402.942301.99760K562FTO
KDM3AENSG00000115548.122562.846401902.116700.430003.075001.65170K562FUS
KDM3AENSG00000115548.121332.476403747.53360-1.491807.774206.82790K562FXR1
KDM3AENSG00000115548.124330.533302977.333700.540402.623001.51240K562GLRX3
KDM3AENSG00000115548.123746.610102510.608100.577403.533402.64070K562GPKOW
KDM3AENSG00000115548.123424.944102167.297700.660103.655501.40730K562HLTF
KDM3AENSG00000115548.124569.529003058.639400.579108.830407.01750K562HNRNPA1
KDM3AENSG00000115548.124889.872703001.476900.704002.673401.48050K562HNRNPA2B1
KDM3AENSG00000115548.123403.149602335.913000.542808.521207.52500K562HNRNPC
KDM3AENSG00000115548.122535.339702086.150900.281202.438001.37850K562HNRNPF
KDM3AENSG00000115548.12876.270002032.64970-1.213904.233403.06650K562HNRNPM
KDM3AENSG00000115548.124591.652103386.874100.439005.048103.82890K562HNRNPU
KDM3AENSG00000115548.121906.954403349.37840-0.812602.634901.85790K562HSPD1
KDM3AENSG00000115548.126590.971603400.111000.954807.352005.84580K562KIF1C
KDM3AENSG00000115548.123749.406402144.127400.806208.926907.13650K562KRR1
KDM3AENSG00000115548.123338.736204141.11570-0.310703.208102.29850K562MAGOH
KDM3AENSG00000115548.124734.427203254.935700.540502.351301.38740K562MAK16
KDM3AENSG00000115548.126375.924503809.016400.7431017.7831015.24380K562MBNL1
KDM3AENSG00000115548.128050.769906329.750400.346903.494402.22500K562MSI2
KDM3AENSG00000115548.123832.539103130.299200.291904.735503.70030K562MTPAP
KDM3AENSG00000115548.125300.080502669.865500.989103.388302.39220K562NAA15
KDM3AENSG00000115548.124959.362203477.925100.5118023.6187021.75970K562NSUN2
KDM3AENSG00000115548.124658.323302624.244000.827803.187702.10520K562PABPN1
KDM3AENSG00000115548.123643.184706102.01380-0.7441016.4951013.84190K562PNPT1
KDM3AENSG00000115548.121449.617602401.17370-0.7281010.594009.11660K562PRPF8
KDM3AENSG00000115548.121921.731404023.25770-1.0660027.4178025.42390K562PTBP1
KDM3AENSG00000115548.125466.309506479.26910-0.245302.151801.43330K562PUF60
KDM3AENSG00000115548.127589.914303177.101301.2563036.1612034.13220K562PUS1
KDM3AENSG00000115548.125612.854103601.673900.640002.701701.30810K562RAVER1
KDM3AENSG00000115548.126118.521503096.008200.9827038.8834036.57360K562RBM15
KDM3AENSG00000115548.122748.418902119.088700.375107.639405.11650K562RPS10
KDM3AENSG00000115548.122964.379004248.30820-0.519202.728301.73160K562RPS3
KDM3AENSG00000115548.123697.994602454.910000.591004.953503.17170K562RRP9
KDM3AENSG00000115548.12923.882402532.50450-1.4548044.7680041.62780K562SAFB
KDM3AENSG00000115548.125779.545503432.000600.751804.794603.74670K562SF3A3
KDM3AENSG00000115548.123713.941002388.207000.636906.318104.81730K562SF3B1
KDM3AENSG00000115548.122143.573801539.389500.477604.890803.17770K562SLBP
KDM3AENSG00000115548.125672.479402756.463001.041106.046404.00380K562SNRNP200
KDM3AENSG00000115548.124201.491603516.174600.256805.104803.87900K562SRPK2
KDM3AENSG00000115548.122067.132203943.99050-0.9320022.3939020.39010K562SRSF1
KDM3AENSG00000115548.122796.887304101.96590-0.552504.061402.75020K562SRSF4
KDM3AENSG00000115548.122684.056302219.301700.274203.559102.07660K562SSB
KDM3AENSG00000115548.124959.527103241.317500.613504.065302.39590K562SSRP1
KDM3AENSG00000115548.124924.885402964.253900.732305.129603.34850K562STAU1
KDM3AENSG00000115548.123159.721802324.542300.442803.826002.61560K562SUPV3L1
KDM3AENSG00000115548.121018.949402850.81760-1.4843055.7637052.95890K562SYNCRIP
KDM3AENSG00000115548.122797.612803850.54240-0.460906.909605.52500K562TIA1
KDM3AENSG00000115548.122628.296902140.381900.296202.582801.67560K562TRIM56
KDM3AENSG00000115548.124582.039002888.313600.665704.148302.34920K562TRIP6
KDM3AENSG00000115548.125111.021803714.990800.460206.488804.51050K562TROVE2
KDM3AENSG00000115548.122623.846604221.23170-0.686006.401103.83740K562TUFM
KDM3AENSG00000115548.123244.187402460.398300.398903.636002.45600K562UCHL5
KDM3AENSG00000115548.124346.727203687.727100.237103.810902.98010K562UPF1
KDM3AENSG00000115548.125160.924403155.456300.709708.309606.75220K562WDR3
KDM3AENSG00000115548.129427.782605597.620800.752007.084405.59340K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for KDM3A is not available on ENCORE database.





23 RBPs can affect the splicing of KDM3A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEKDM3AENSG00000115548.12chr2+8668326486683328866822078668231086683564866836890.057000.000420.01029includedK562SRSF1
SEKDM3AENSG00000115548.12chr2+8668790186687954866841058668419486691175866913390.251000.000000.00013includedHepG2HNRNPM
SEKDM3AENSG00000115548.12chr2+8668790186687954866841058668419486691175866913390.104000.000010.00019includedK562AQR
SEKDM3AENSG00000115548.12chr2+8668790186687954866841058668419486691175866913390.085000.000060.00412includedK562FXR1
SEKDM3AENSG00000115548.12chr2+8666839486668567866679238666808586669140866693560.455000.000520.04437includedK562SUPV3L1
SEKDM3AENSG00000115548.12chr2+8668790186687954866841058668419486691175866913390.087000.000010.00909includedK562NCBP2
A3SSKDM3AENSG00000115548.12chr2+8670570586705858867057308670585886705292867053880.196000.000000.00000longerK562AQR
A5SSKDM3AENSG00000115548.12chr2+8670189886702133867018988670211386704999867053880.057000.000260.00592longerK562AQR
RIKDM3AENSG00000115548.12chr2+8670499986705388867049998670515286705292867053880.072000.000190.00446includedK562SF3B4
RIKDM3AENSG00000115548.12chr2+8671664286718180867166428671678286718003867181800.074000.000800.04983includedK562PPIL4
RIKDM3AENSG00000115548.12chr2+867166428671818086716642867167828671800386718180-0.113000.000020.00287excludedK562DROSHA
RIKDM3AENSG00000115548.12chr2+8670958086711281867095808670981786711109867112810.147000.000000.00000includedK562PUS1
RIKDM3AENSG00000115548.12chr2+8670499986705388867049998670515286705292867053880.087000.000000.00000includedK562PUS1
RIKDM3AENSG00000115548.12chr2+8671826386719839867182638671839886719161867198390.054000.000000.00001includedK562PUS1
RIKDM3AENSG00000115548.12chr2+8671664286718180867166428671678286718003867181800.110000.000000.00000includedK562PUS1
RIKDM3AENSG00000115548.12chr2+867095808671128186709580867098178671110986711281-0.054000.000310.01034excludedK562HNRNPC
RIKDM3AENSG00000115548.12chr2+867095808671128186709580867098178671110986711281-0.054000.000440.04568excludedK562NSUN2
RIKDM3AENSG00000115548.12chr2+8670958086711281867095808670981786711109867112810.258000.000000.00000includedHepG2U2AF2
RIKDM3AENSG00000115548.12chr2+867057308670748586705730867058588670728986707485-0.059000.000410.02616excludedK562NCBP2
RIKDM3AENSG00000115548.12chr2+867166428671818086716642867167828671800386718180-0.112000.000040.00337excludedK562HNRNPUL1
RIKDM3AENSG00000115548.12chr2+8671664286718180867166428671678286718003867181800.089000.000050.00089includedK562AGGF1
RIKDM3AENSG00000115548.12chr2+8670958086711281867095808670981786711109867112810.053000.009890.08873includedK562AGGF1
RIKDM3AENSG00000115548.12chr2+8671826386719839867182638671839886719161867198390.064000.000000.00001includedK562AGGF1
RIKDM3AENSG00000115548.12chr2+8670499986705388867049998670515286705292867053880.061000.000000.00002includedK562AGGF1
RIKDM3AENSG00000115548.12chr2+8670573086707485867057308670585886707289867074850.075000.000780.01934includedHepG2IGF2BP3
RIKDM3AENSG00000115548.12chr2+8670573086707485867057308670585886707289867074850.068000.000200.00690includedHepG2SRSF1
RIKDM3AENSG00000115548.12chr2+8670573086707485867057308670585886707289867074850.064000.000040.00087includedHepG2QKI
RIKDM3AENSG00000115548.12chr2+8670499986705388867049998670515286705292867053880.060000.000000.00002includedK562AKAP8L
RIKDM3AENSG00000115548.12chr2+8671664286718180867166428671678286718003867181800.052000.005210.04558includedK562AKAP8L
RIKDM3AENSG00000115548.12chr2+8670958086711281867095808670981786711109867112810.072000.000650.00762includedK562AKAP8L
RIKDM3AENSG00000115548.12chr2+8670958086711281867095808670981786711109867112810.067000.002140.02438includedK562RBM15
RIKDM3AENSG00000115548.12chr2+8670573086707485867057308670585886707289867074850.071000.004380.06647includedK562U2AF1
RIKDM3AENSG00000115548.12chr2+8670573086707485867057308670585886707289867074850.101000.000160.00345includedK562U2AF2
RIKDM3AENSG00000115548.12chr2+8670573086707485867057308670585886707289867074850.065000.000270.00490includedHepG2NCBP2
RIKDM3AENSG00000115548.12chr2+8671664286718180867166428671678286718003867181800.066000.001600.02172includedK562UTP18
RIKDM3AENSG00000115548.12chr2+867095808671128186709580867098178671110986711281-0.091000.000050.01220excludedK562METAP2
RIKDM3AENSG00000115548.12chr2+8671664286718180867166428671678286718003867181800.052000.000080.00070includedK562AQR
RIKDM3AENSG00000115548.12chr2+8670573086707485867057308670585886707289867074850.130000.000000.00000includedK562AQR
RIKDM3AENSG00000115548.12chr2+8670958086711281867095808670981786711109867112810.153000.000010.00544includedHepG2CDC40

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for KDM3A is not avaliable on ENCORE database.