GAPDH

General Information

Gene Name       : GAPDH
Gene ID             : ENSG00000111640.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: GAPDH)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GAPDHENSG00000111640.143227.176449.974838.57ENCSR000AEF
HepG2GAPDHENSG00000111640.145603.253233.264418.26ENCSR985KAT
K562GAPDHENSG00000111640.144087.433735.133911.28ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GAPDH is not avaliable on ENCORE database.



Proteins bound to RNA
  • GAPDH RNA is bound by 33 proteins.  







eCLIP assay for GAPDH is not avaliable on ENCORE database.





33 proteins are bound to GAPDH RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1266458756645883+3'-UTR,CDS4.9441457.05269K562METAP2
chr1266474976647515+3'-UTR3.5074725.65053HepG2LARP4
chr1266457096645724+3'-UTR,5'-UTR,CDS3.23439400.00000K562YBX3
chr1266474246647444+3'-UTR3.2103020.42018HepG2LARP4
chr1266456616645688+3'-UTR,5'-UTR,CDS4.3001423.59258HepG2RPS3
chr1266473496647369+3'-UTR4.78315400.00000K562PABPC4
chr1266458786645882+3'-UTR,CDS3.37908400.00000K562YBX3
chr1266458836645896+3'-UTR,CDS4.8697774.48493K562METAP2
chr1266456956645701+3'-UTR,5'-UTR,CDS3.2764727.81616HepG2YBX3
chr1266456596645698+3'-UTR,5'-UTR,CDS,intron-Proximal3.441285.19307K562EIF3G
chr1266474446647497+3'-UTR4.1552384.30611HepG2LARP4
chr1266472826647369+3'-UTR,CDS4.2953887.08073HepG2RPS3
chr1266474816647512+3'-UTR3.53979400.00000K562PABPC4
chr1266459436645953+3'-UTR,CDS5.56938400.00000K562METAP2
chr1266458516645855+3'-UTR,CDS3.37998400.00000K562YBX3
chr1266458496645851+3'-UTR,CDS,intron-Proximal3.3393185.50575K562YBX3
chr1266458626645878+3'-UTR,CDS3.50576400.00000K562YBX3
chr1266456966645709+3'-UTR,5'-UTR,CDS3.51365400.00000K562YBX3
chr1266459156645928+3'-UTR,CDS5.18189400.00000K562METAP2
chr1266474476647456+3'-UTR3.3913558.23690K562PABPC4
chr1266457516645757+3'-UTR,5'-UTR,CDS4.247789.79783K562RPS3
chr1266457266645741+3'-UTR,5'-UTR,CDS3.0508620.54927HepG2YBX3
chr1266457116645726+3'-UTR,5'-UTR,CDS3.1476425.36911HepG2YBX3
chr1266456326645669+3'-UTR,5'-UTR,CDS,intron-Proximal6.0696015.77786HepG2AQR
chr1266456806645689+3'-UTR,5'-UTR,CDS3.94071400.00000K562YBX3
chr1266459426645956+3'-UTR,CDS3.4002782.67266HepG2YBX3
chr1266474636647473+3'-UTR3.00561400.00000K562YBX3
chr1266457476645759+3'-UTR,5'-UTR,CDS3.56844400.00000K562YBX3
chr1266458506645905+3'-UTR,CDS4.2336664.57569K562RPS3
chr1266474486647455+3'-UTR3.41436400.00000K562YBX3
chr1266474736647506+3'-UTR3.9971264.63846K562METAP2
chr1266456896645696+3'-UTR,5'-UTR,CDS3.94189400.00000K562YBX3
chr1266458826645897+3'-UTR,CDS3.17649400.00000K562YBX3
chr1266473426647379+3'-UTR3.7963948.77588K562APOBEC3C
chr1266456596645680+3'-UTR,5'-UTR,CDS,intron-Proximal3.66834400.00000K562YBX3
chr1266459386645942+3'-UTR,CDS3.5763666.70662HepG2YBX3
chr1266459336645938+3'-UTR,CDS3.5733958.96031HepG2YBX3
chr1266459286645933+3'-UTR,CDS3.3669152.01730HepG2YBX3
chr1266456606645679+3'-UTR,5'-UTR,CDS3.9497642.37697K562METAP2
chr1266458966645915+3'-UTR,CDS5.12879400.00000K562METAP2
chr1266459496645956+3'-UTR,CDS4.730966.38201HepG2IGF2BP3
chr1266457396645747+3'-UTR,5'-UTR,CDS3.23185400.00000K562YBX3
chr1266456606645691+3'-UTR,5'-UTR,CDS3.9743125.90149K562RPS3
chr1266458656645875+3'-UTR,CDS5.1255152.60450K562METAP2
chr1266458556645862+3'-UTR,CDS3.65240400.00000K562YBX3
chr1266473696647381+3'-UTR3.3797251.72783K562PABPC4
chr1266473366647341+3'-UTR4.68096400.00000K562PABPC4
chr1266457016645711+3'-UTR,5'-UTR,CDS3.2214428.79011HepG2YBX3
chr1266474146647447+3'-UTR3.4650565.02070K562PABPC4
chr1266473246647342+3'-UTR,CDS3.6646448.59832K562APOBEC3C
chr1266459206645928+3'-UTR,CDS3.1583851.48618HepG2YBX3
chr1266456636645679+3'-UTR,5'-UTR,CDS3.1296125.66452HepG2YBX3
chr1266459536645956+3'-UTR,CDS5.65317400.00000K562METAP2
chr1266459456645956+3'-UTR,CDS3.31113400.00000K562YBX3
chr1266473446647349+3'-UTR4.79721400.00000K562PABPC4
chr1266474726647481+3'-UTR3.2829661.89558K562PABPC4
chr1266472976647363+3'-UTR,CDS3.7014338.93652K562RPS3
chr1266456606645675+3'-UTR,5'-UTR,CDS3.364485.13142HepG2IGF2BP3
chr1266473416647344+3'-UTR4.87332400.00000K562PABPC4
chr1266473326647336+3'-UTR,CDS4.74417400.00000K562PABPC4
chr1266457246645739+3'-UTR,5'-UTR,CDS3.1372784.35067K562YBX3
chr1266474596647511+3'-UTR3.8166154.35677HepG2G3BP1
chr1266474256647448+3'-UTR3.2576082.83833K562YBX3
chr1266474466647473+3'-UTR3.4682851.46703K562METAP2
chr1266473246647370+3'-UTR,CDS3.2931048.57978HepG2LARP4
chr1266456876645695+3'-UTR,5'-UTR,CDS3.5166529.47898HepG2YBX3
chr1266473296647365+3'-UTR,CDS4.4578262.42000K562METAP2
chr1266474556647463+3'-UTR3.10587400.00000K562YBX3
chr1266458516645898+3'-UTR,CDS4.3810443.58694HepG2RPS3
chr1266459286645943+3'-UTR,CDS5.41673400.00000K562METAP2
chr1266439756643977+5'-UTR,intron-Proximal4.7285463.18164K562METAP2
chr1266439756643980+5'-UTR,intron-Proximal4.6487326.10225HepG2IGF2BP3
chr1266439916643999+5'-UTR3.13609400.00000K562YBX3
chr1266437166643732+5'-UTR3.4468321.74105K562GEMIN5
chr1266439166643967+5'-UTR,intron-Proximal3.474113.14078HepG2GRSF1
chr1266440206644090+5'-UTR,CDS,intron-Proximal4.2372046.24834HepG2PRPF8
chr1266437606643783+5'-UTR,intron-Proximal3.3481515.73900HepG2PRPF8
chr1266436886643717+5'-UTR3.527935.26725HepG2DDX3X
chr1266439796643983+5'-UTR3.32754400.00000K562YBX3
chr1266439836643987+5'-UTR3.21988400.00000K562YBX3
chr1266437326643735+5'-UTR3.4347724.11953K562IGF2BP2
chr1266440066644027+5'-UTR,CDS3.4401614.31321K562RPS3
chr1266437176643736+5'-UTR,intron-Proximal3.1801820.11172HepG2DDX3X
chr1266439776643983+5'-UTR3.2269523.68782K562IGF2BP2
chr1266439136643973+5'-UTR,intron-Proximal3.075979.50677HepG2PRPF4
chr1266439756643983+5'-UTR,intron-Proximal3.7318228.92227HepG2RPS3
chr1266440166644027+5'-UTR,CDS3.9268639.46232K562METAP2
chr1266439806644027+5'-UTR,CDS4.5402730.40273HepG2IGF2BP3
chr1266439836644000+5'-UTR,CDS3.6488534.91883HepG2RPS3
chr1266439026643981+5'-UTR,intron-Proximal4.5333715.40569HepG2SF3B4
chr1266440176644022+5'-UTR,CDS3.3725113.87312HepG2RPS3
chr1266437216643728+5'-UTR3.28448400.00000K562YBX3
chr1266439096643939+5'-UTR,intron-Proximal4.094443.86455HepG2GTF2F1
chr1266437486643835+5'-UTR,intron-Proximal4.2775612.39827HepG2PRPF4
chr1266440246644027+5'-UTR,CDS3.49613400.00000K562YBX3
chr1266437226643729+5'-UTR4.8901562.98105K562METAP2
chr1266437296643735+5'-UTR4.7485163.45230K562METAP2
chr1266437206643735+5'-UTR3.7277431.63476HepG2RPS3
chr1266440136644028+5'-UTR,CDS,intron-Proximal3.270593.97324K562EIF3G
chr1266439306643963+5'-UTR,intron-Proximal4.214713.76710K562NONO
chr1266437356643772+5'-UTR,intron-Proximal3.430985.46476K562AQR
chr1266437176643721+5'-UTR3.2962785.71449K562YBX3
chr1266439836644012+5'-UTR,CDS3.2522022.79773K562GEMIN5
chr1266439756643977+5'-UTR,intron-Proximal3.5398322.49054K562GEMIN5
chr1266439976644016+5'-UTR,CDS4.3014980.35118K562METAP2
chr1266439306643967+5'-UTR,intron-Proximal4.6682925.27592HepG2EFTUD2
chr1266437326643735+5'-UTR3.5056221.50448K562GEMIN5
chr1266440256644072+5'-UTR,CDS,intron-Proximal3.2085413.26903K562AQR
chr1266437176643735+5'-UTR4.7719324.82336HepG2IGF2BP3
chr1266439776643979+5'-UTR3.33093400.00000K562YBX3
chr1266436896643717+5'-UTR3.5002359.62733K562YBX3
chr1266439756643977+5'-UTR,intron-Proximal3.30685400.00000K562YBX3
chr1266439146643970+5'-UTR,intron-Proximal3.221064.52495HepG2XRN2
chr1266439776643997+5'-UTR4.5351085.63680K562METAP2
chr1266437586643776+5'-UTR,intron-Proximal5.6324821.90188HepG2AQR
chr1266440216644024+5'-UTR,CDS3.40808400.00000K562YBX3
chr1266437286643758+5'-UTR,intron-Proximal4.5406921.53086HepG2AQR
chr1266439756643977+5'-UTR,intron-Proximal3.2768623.25916K562IGF2BP2
chr1266439226644014+5'-UTR,CDS,intron-Proximal4.5706829.88359HepG2AQR
chr1266437286643735+5'-UTR3.27179400.00000K562YBX3
chr1266440256644039+5'-UTR,CDS,intron-Proximal4.9708027.31257HepG2AQR
chr1266439776643983+5'-UTR3.5111721.07445K562GEMIN5
chr1266469866647048+CDS3.4938776.69396HepG2G3BP1
chr1266463096646326+CDS4.70344400.00000K562YBX3
chr1266461656646218+CDS,intron-Proximal3.2606221.45488HepG2PRPF8
chr1266461606646173+CDS4.4118057.79550K562METAP2
chr1266464776646494+CDS3.692485.50870HepG2IGF2BP3
chr1266467516646756+CDS3.1123163.25906K562YBX3
chr1266468446646896+CDS4.04121400.00000HepG2RPS3
chr1266461226646152+CDS4.43568400.00000K562METAP2
chr1266461256646132+CDS3.02412400.00000K562YBX3
chr1266467956646834+CDS4.4475663.11312K562METAP2
chr1266463786646382+CDS3.46434400.00000K562YBX3
chr1266461606646169+CDS3.4830637.03428HepG2YBX3
chr1266472946647300+CDS3.7334337.43056K562PABPC4
chr1266463696646379+CDS4.06633400.00000K562METAP2
chr1266461696646173+CDS3.2419528.58130HepG2YBX3
chr1266464756646500+CDS3.0048136.10033HepG2RPS3
chr1266470636647102+CDS3.603267.72566K562ZNF800
chr1266468046646810+CDS3.12331400.00000K562YBX3
chr1266472906647294+CDS3.6885428.39127K562PABPC4
chr1266463466646355+CDS3.4303744.94176HepG2YBX3
chr1266463426646346+CDS3.7914153.98330HepG2YBX3
chr1266461086646178+CDS,intron-Proximal4.01389400.00000K562RPS3
chr1266465396646600+CDS,intron-Proximal3.9164822.13750HepG2PRPF8
chr1266467496646751+CDS,intron-Proximal3.0838060.79140K562YBX3
chr1266471596647161+CDS3.8145527.77168K562METAP2
chr1266463536646369+CDS4.18805400.00000K562METAP2
chr1266460856646089+CDS,intron-Proximal3.15535400.00000K562YBX3
chr1266467496646755+CDS,intron-Proximal4.5689840.11024K562METAP2
chr1266462956646309+CDS4.36515400.00000K562YBX3
chr1266467506646773+CDS4.4886115.90532HepG2AQR
chr1266468966646939+CDS5.1132571.96924HepG2RPS3
chr1266463076646355+CDS3.2225810.13096K562ZNF800
chr1266471186647122+CDS3.97320400.00000K562YBX3
chr1266465396646556+CDS4.2332427.01766K562RPS3
chr1266461526646160+CDS4.0781953.88606K562METAP2
chr1266470956647118+CDS4.00695400.00000K562YBX3
chr1266462706646279+CDS3.0862230.73023HepG2YBX3
chr1266461906646282+CDS,intron-Proximal4.25266400.00000HepG2EFTUD2
chr1266469886647009+CDS3.13267400.00000K562YBX3
chr1266471026647155+CDS3.437288.01361HepG2IGF2BP3
chr1266473056647309+CDS3.7593338.44554K562PABPC4
chr1266473136647318+CDS3.8368547.19742K562PABPC4
chr1266469846647043+CDS3.9882257.66033HepG2RPS3
chr1266464766646490+CDS3.4372172.97621HepG2YBX3
chr1266461066646122+CDS4.83308400.00000K562METAP2
chr1266472736647312+CDS4.0958970.50123K562METAP2
chr1266461736646176+CDS3.2658727.24403HepG2YBX3
chr1266463796646425+CDS,intron-Proximal4.2325621.15190HepG2PRPF8
chr1266464766646512+CDS4.01640400.00000K562METAP2
chr1266468126646817+CDS3.05797400.00000K562YBX3
chr1266469886647036+CDS4.98158400.00000K562METAP2
chr1266465536646598+CDS,intron-Proximal5.4408918.86986HepG2AQR
chr1266463576646371+CDS3.56430400.00000K562YBX3
chr1266473126647327+CDS4.2256656.49624K562METAP2
chr1266463556646371+CDS3.5727961.89620HepG2YBX3
chr1266469396646951+CDS3.6245732.71931HepG2YBX3
chr1266465376646556+CDS3.4366132.32827HepG2RPS3
chr1266471576647202+CDS,intron-Proximal4.3719925.60831HepG2PRPF8
chr1266464856646489+CDS3.30159400.00000K562YBX3
chr1266463316646338+CDS4.73140400.00000K562YBX3
chr1266464746646476+CDS,intron-Proximal3.94325400.00000K562METAP2
chr1266473236647332+CDS4.49778400.00000K562PABPC4
chr1266463446646348+CDS3.75079400.00000K562YBX3
chr1266469396646968+CDS4.5944954.20717HepG2RPS3
chr1266460956646100+CDS3.1709066.34782HepG2YBX3
chr1266463096646327+CDS4.16333400.00000HepG2YBX3
chr1266473036647324+CDS3.3839644.59950K562APOBEC3C
chr1266470836647095+CDS4.23328400.00000K562YBX3
chr1266467496646772+CDS,intron-Proximal3.5275641.61802HepG2RPS3
chr1266470096647015+CDS3.20599400.00000K562YBX3
chr1266463796646382+CDS3.99385400.00000K562METAP2
chr1266460486646090+CDS,intron-Proximal3.8957622.35364HepG2AQR
chr1266467896646843+CDS3.90150400.00000HepG2RPS3
chr1266463006646351+CDS4.77276400.00000K562METAP2
chr1266464966646500+CDS3.02782400.00000K562YBX3
chr1266470776647083+CDS4.29056400.00000K562YBX3
chr1266463386646344+CDS3.94448400.00000K562YBX3
chr1266465486646555+CDS4.000614.95361HepG2SND1
chr1266471226647139+CDS3.09263400.00000K562YBX3
chr1266463716646382+CDS3.4201968.79339HepG2YBX3
chr1266466816646785+CDS,intron-Proximal3.3545632.08091HepG2PRPF8
chr1266471186647141+CDS4.8674164.33589K562METAP2
chr1266472676647273+CDS3.9737032.55942K562METAP2
chr1266469746646986+CDS3.0086030.95676HepG2G3BP1
chr1266468606646868+CDS3.19621400.00000K562YBX3
chr1266470806647118+CDS4.9160770.22397K562METAP2
chr1266470486647077+CDS3.378188.57701HepG2IGF2BP3
chr1266467946646838+CDS3.5167648.37967K562RPS3
chr1266463036646352+CDS3.6889647.77885HepG2RPS3
chr1266467566646768+CDS3.24622400.00000K562YBX3
chr1266462936646309+CDS4.0462286.67330HepG2YBX3
chr1266467846646804+CDS3.40053400.00000K562YBX3
chr1266460856646090+CDS,intron-Proximal3.3226368.93655HepG2YBX3
chr1266464746646485+CDS,intron-Proximal3.47523400.00000K562YBX3
chr1266464956646513+CDS3.2714465.19568HepG2YBX3
chr1266460906646095+CDS3.2294165.44705HepG2YBX3
chr1266473096647313+CDS3.8539441.59488K562PABPC4
chr1266470236647034+CDS3.2599335.91851HepG2YBX3
chr1266463486646354+CDS3.66901400.00000K562YBX3
chr1266468456646896+CDS3.5336955.62696K562RPS3
chr1266464916646495+CDS3.2887852.13414HepG2YBX3
chr1266462666646283+CDS,intron-Proximal3.078287.38578K562DDX24
chr1266469516646967+CDS3.3619133.32701HepG2YBX3
chr1266473186647323+CDS3.9674958.16367K562PABPC4
chr1266461426646176+CDS4.91018400.00000HepG2RPS3
chr1266469406646974+CDS3.2532252.84786HepG2G3BP1
chr1266468506646887+CDS4.5438871.18746K562METAP2
chr1266469226646971+CDS4.4208646.47461K562RPS3
chr1266470346647040+CDS3.0427722.03543HepG2YBX3
chr1266460856646098+CDS,intron-Proximal3.791425.32467HepG2IGF2BP3
chr1266463356646342+CDS3.9944170.68561HepG2YBX3
chr1266472666647290+CDS,intron-Proximal3.5908034.21723K562PABPC4
chr1266467546646768+CDS5.376187.33420HepG2SND1
chr1266470156647030+CDS3.11932400.00000K562YBX3
chr1266467556646775+CDS4.4128353.84303K562METAP2
chr1266461506646159+CDS3.0369686.85530K562YBX3
chr1266472746647303+CDS3.1494741.13282K562APOBEC3C
chr1266462666646270+CDS,intron-Proximal3.1981825.15523HepG2YBX3
chr1266470776647102+CDS3.234457.34305HepG2IGF2BP3
chr1266467496646775+CDS,intron-Proximal4.1034235.30863K562RPS3
chr1266468346646850+CDS4.3752763.96758K562METAP2
chr1266463266646331+CDS4.72951400.00000K562YBX3
chr1266462666646283+CDS,intron-Proximal4.7199235.76789HepG2RPS3
chr1266460856646106+CDS,intron-Proximal5.72019400.00000K562METAP2
chr1266468316646849+CDS3.00367400.00000K562YBX3
chr1266462666646284+CDS,intron-Proximal3.4902324.76000K562RPS3
chr1266463276646335+CDS4.49805400.00000HepG2YBX3
chr1266461026646142+CDS4.2225282.76579HepG2RPS3
chr1266469386646945+CDS3.571274.99373K562PCBP1
chr1266473006647305+CDS3.7700737.25681K562PABPC4
chr1266464896646492+CDS3.14520400.00000K562YBX3
chr1266441216644148+intron-Distal,intron-Proximal3.020983.38231HepG2PRPF4
chr1266446666644705+intron-Distal,intron-Proximal5.317064.83371K562EFTUD2
chr1266443436644385+intron-Distal4.2190824.14918HepG2EFTUD2
chr1266448966644933+intron-Distal3.310165.92454HepG2XRN2
chr1266446786644706+intron-Distal,intron-Proximal3.2673211.71126HepG2EFTUD2
chr1266441126644155+intron-Distal,intron-Proximal3.675635.32871HepG2CSTF2T
chr1266441126644143+intron-Distal,intron-Proximal4.1800218.54235HepG2EFTUD2
chr1266457796645825+intron-Proximal5.1776718.46362HepG2PRPF8
chr1266467046646742+intron-Proximal3.364485.40117HepG2PRPF4
chr1266467256646750+intron-Proximal5.3434630.63800HepG2AQR
chr1266457826645843+intron-Proximal4.759786.92814HepG2SF3B4
chr1266466896646724+intron-Proximal5.862368.45613K562EFTUD2
chr1266472256647249+intron-Proximal5.6269216.01864HepG2EFTUD2
chr1266466096646658+intron-Proximal4.6010111.91451HepG2RBM22
chr1266464196646471+intron-Proximal4.428725.28859HepG2SF3B4
chr1266465736646629+intron-Proximal4.4551111.83800K562AQR
chr1266440406644086+intron-Proximal3.576997.07641HepG2PRPF4
chr1266459916646028+intron-Proximal3.017763.46338HepG2RBM22
chr1266440486644060+intron-Proximal4.561544.53069HepG2CDC40
chr1266456086645654+intron-Proximal3.839726.32943HepG2SF3B4
chr1266440356644094+intron-Proximal3.6358313.87713HepG2RBM22
chr1266462026646264+intron-Proximal3.031943.89233HepG2SF3B4
chr1266456126645651+intron-Proximal5.9325532.33428HepG2SF3A3
chr1266440376644104+intron-Proximal4.777475.19780K562NONO
chr1266440396644089+intron-Proximal4.8228130.44104HepG2BUD13
chr1266467076646746+intron-Proximal5.4243129.71954HepG2BUD13
chr1266467016646744+intron-Proximal3.531945.09328HepG2SF3B4
chr1266464256646442+intron-Proximal5.330296.03057K562EFTUD2
chr1266466956646743+intron-Proximal3.6407016.74688K562PRPF8
chr1266440446644095+intron-Proximal5.0414047.27362HepG2EFTUD2
chr1266460286646080+intron-Proximal4.6087727.02988HepG2BUD13
chr1266440376644055+intron-Proximal4.261485.76119HepG2SUPV3L1
chr1266440396644069+intron-Proximal5.5412934.17939HepG2AQR
chr1266472056647265+intron-Proximal4.972917.97588HepG2SF3B4
chr1266466736646741+intron-Proximal3.601309.96134HepG2RBFOX2
chr1266462026646261+intron-Proximal7.6754536.54428K562EFTUD2
chr1266466986646745+intron-Proximal4.3803441.91934HepG2EFTUD2
chr1266440296644078+intron-Proximal3.302618.09190HepG2PPIG
chr1266460096646070+intron-Proximal4.3764729.98894HepG2EFTUD2
chr1266457936645834+intron-Proximal5.2777925.80918HepG2EFTUD2
chr1266459886646048+intron-Proximal5.3329038.46060HepG2AQR
chr1266466956646725+intron-Proximal4.8760015.16112HepG2AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GAPDH is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GAPDH is not available on ENCORE database.

  • 154 RBPs can affect the levels of GAPDH.  








The Knockdown/knockout RNA-Seq assay for GAPDH is not available on ENCORE database.





154 RBPs can affect the gene expression of GAPDH :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GAPDHENSG00000111640.1051064.1855062261.15450-0.286002.915101.81980HepG2AATF
GAPDHENSG00000111640.1061869.69000103043.04940-0.735902.716501.78280HepG2ABCF1
GAPDHENSG00000111640.1094600.17920134733.93380-0.510205.149504.45240HepG2AKAP1
GAPDHENSG00000111640.1095610.98850107291.89150-0.166302.565901.90120HepG2AUH
GAPDHENSG00000111640.1049994.7582060851.96270-0.283502.234301.39650HepG2BCCIP
GAPDHENSG00000111640.1055418.9111041471.984900.418103.381802.72720HepG2BOP1
GAPDHENSG00000111640.1047991.2139067726.14220-0.496906.367105.25840HepG2CALR
GAPDHENSG00000111640.1047703.1715080048.75900-0.746808.184407.15850HepG2CKAP4
GAPDHENSG00000111640.1031491.0828065698.78090-1.060902.935802.14670HepG2CNOT7
GAPDHENSG00000111640.1053526.7716038071.772500.491404.625603.75710HepG2CPSF6
GAPDHENSG00000111640.10134815.0555084800.383100.668705.905204.32790HepG2CPSF7
GAPDHENSG00000111640.1097322.2808066495.118300.549408.097206.37120HepG2YBX3
GAPDHENSG00000111640.1026974.1797037582.09650-0.478507.002705.40920HepG2CSTF2
GAPDHENSG00000111640.1089380.11250104999.24370-0.232404.114603.23900HepG2DAZAP1
GAPDHENSG00000111640.1059184.2673074058.01290-0.323402.268201.50830HepG2DDX19B
GAPDHENSG00000111640.1036223.5155068650.48100-0.9223025.0067023.25170HepG2DDX21
GAPDHENSG00000111640.1047047.4939067214.97190-0.5147010.215108.50610HepG2DDX24
GAPDHENSG00000111640.1068345.01850129056.39740-0.9171017.5651016.13420HepG2DDX3X
GAPDHENSG00000111640.10171600.33670110882.174000.629907.320106.35680HepG2DDX6
GAPDHENSG00000111640.1078701.7505062974.654700.321503.622702.50850HepG2DHX30
GAPDHENSG00000111640.1044631.9557076614.05230-0.779508.006906.96850HepG2DKC1
GAPDHENSG00000111640.1071126.9389064717.116900.136102.531101.90200HepG2DNAJC2
GAPDHENSG00000111640.1041543.6658076318.53630-0.8774018.8771016.80870HepG2EEF2
GAPDHENSG00000111640.1042915.2586063619.17170-0.568008.193906.28720HepG2EFTUD2
GAPDHENSG00000111640.1050572.3498064852.77120-0.358805.278903.84360HepG2EIF3G
GAPDHENSG00000111640.1041283.20190117766.96310-1.5123037.8747035.56030HepG2EIF4A3
GAPDHENSG00000111640.1048459.50700114681.04830-1.2428020.4652018.71460HepG2EIF4B
GAPDHENSG00000111640.1058180.44030123189.20870-1.0823057.2846055.20490HepG2ETF1
GAPDHENSG00000111640.1065459.92880104036.76340-0.668402.144101.46290HepG2FIP1L1
GAPDHENSG00000111640.1087975.80770118851.07190-0.434004.741903.85270HepG2FXR1
GAPDHENSG00000111640.1074119.05750110236.46670-0.572706.821205.79600HepG2G3BP1
GAPDHENSG00000111640.1093417.50650117050.17230-0.325402.986102.06080HepG2G3BP2
GAPDHENSG00000111640.1042457.2912055159.03680-0.377604.212403.09490HepG2GEMIN5
GAPDHENSG00000111640.1030445.5437043152.47310-0.503202.370101.77390HepG2GPKOW
GAPDHENSG00000111640.1041047.2314067171.90570-0.710605.069503.14530HepG2HLTF
GAPDHENSG00000111640.1032638.2063065917.77670-1.0141031.6624029.92740HepG2HNRNPA1
GAPDHENSG00000111640.10110674.8452096503.867600.197603.494002.46110HepG2HNRNPA2B1
GAPDHENSG00000111640.1056117.8421073321.81280-0.385805.153904.23020HepG2HNRNPC
GAPDHENSG00000111640.1065144.0420052846.354400.301705.296304.34410HepG2HNRNPF
GAPDHENSG00000111640.10139607.1317095642.152800.5456037.2307035.08590HepG2HNRNPL
GAPDHENSG00000111640.1050647.4354072837.01810-0.5242021.2460019.67380HepG2HNRNPU
GAPDHENSG00000111640.1060263.4028088914.02230-0.561105.561103.83010HepG2HSPD1
GAPDHENSG00000111640.1076682.66460112047.50600-0.547107.111306.07820HepG2IGF2BP2
GAPDHENSG00000111640.1050276.44520105173.71300-1.064805.254503.92100HepG2IGF2BP3
GAPDHENSG00000111640.10101763.6046073195.714400.475306.384404.86760HepG2KIF1C
GAPDHENSG00000111640.1048738.8272088847.29520-0.8663010.277707.98170HepG2KRR1
GAPDHENSG00000111640.1050766.8291069098.73170-0.444805.998804.24120HepG2LIN28B
GAPDHENSG00000111640.1044862.40600118892.69500-1.4061039.1125036.89830HepG2MAGOH
GAPDHENSG00000111640.1051632.03820119553.38340-1.2113026.2944024.52540HepG2MATR3
GAPDHENSG00000111640.1047679.5556064836.11630-0.443403.059501.95260HepG2METAP2
GAPDHENSG00000111640.1064254.54380122365.68150-0.9293017.3960015.89530HepG2NCBP2
GAPDHENSG00000111640.1089653.45870104117.76130-0.215802.403101.69410HepG2NOL12
GAPDHENSG00000111640.10145945.3396060074.173601.280505.468704.19090HepG2PABPC1
GAPDHENSG00000111640.1080207.57860108956.91510-0.441904.561703.64670HepG2PABPC4
GAPDHENSG00000111640.1050563.9006072095.58530-0.5118018.6197016.79200HepG2PARN
GAPDHENSG00000111640.1065701.90040113994.29520-0.7950046.1538044.24310HepG2PCBP1
GAPDHENSG00000111640.1037922.0165066271.36440-0.805307.833406.17860HepG2PCBP2
GAPDHENSG00000111640.1095108.0945064964.717500.5498010.081608.72290HepG2PPIL4
GAPDHENSG00000111640.1021387.4761046144.56210-1.1094027.7878025.65110HepG2PRPF8
GAPDHENSG00000111640.1051932.21870115994.03360-1.1593092.3207090.26750HepG2PTBP1
GAPDHENSG00000111640.1061970.7330099393.28020-0.6816015.0269013.78790HepG2PUF60
GAPDHENSG00000111640.1056277.78280105514.76200-0.9068027.2905025.81650HepG2PUM1
GAPDHENSG00000111640.1077797.75970105434.95060-0.438608.342407.20520HepG2PUM2
GAPDHENSG00000111640.1051384.0988081568.11140-0.666706.323205.46050HepG2PUS1
GAPDHENSG00000111640.1080359.93590125623.17560-0.6446020.4953019.02030HepG2QKI
GAPDHENSG00000111640.1077613.1595099568.69700-0.359405.754504.57460HepG2RBM15
GAPDHENSG00000111640.1044706.09340102962.59880-1.2036079.0394077.03700HepG2RBM22
GAPDHENSG00000111640.1088045.22850114011.56990-0.372905.492204.57170HepG2RBM25
GAPDHENSG00000111640.1048307.5295079352.99570-0.7160012.7898010.64110HepG2RBM27
GAPDHENSG00000111640.1082985.73560129089.74430-0.6374031.1098029.71420HepG2NELFE
GAPDHENSG00000111640.1065595.04240120230.42080-0.8741058.7413056.70240HepG2RECQL
GAPDHENSG00000111640.1038901.5539056934.40600-0.549509.600808.45510HepG2RPLP0
GAPDHENSG00000111640.1024268.0739060283.87000-1.3127057.1018054.98700HepG2RPS19
GAPDHENSG00000111640.1029624.2139073184.81840-1.3048041.4645038.65260HepG2RPS2
GAPDHENSG00000111640.1036460.8297066049.65850-0.857202.175401.46580HepG2RPS3A
GAPDHENSG00000111640.1052823.0103074705.46420-0.500006.729805.06110HepG2RPS5
GAPDHENSG00000111640.1020081.7034045645.42830-1.1846027.1065025.14140HepG2RRP9
GAPDHENSG00000111640.1046280.5653069599.80400-0.588704.324302.39610HepG2RTF1
GAPDHENSG00000111640.1077436.7279064864.306500.255506.990906.03490HepG2SAFB2
GAPDHENSG00000111640.1044679.6742060500.38880-0.437305.194903.91630HepG2SERBP1
GAPDHENSG00000111640.1055973.0857084962.20680-0.602105.045104.11610HepG2SF3A3
GAPDHENSG00000111640.1028940.6267040758.88880-0.494002.358401.70400HepG2SF3B1
GAPDHENSG00000111640.1062780.20120120763.72870-0.9438044.8256042.99880HepG2SF3B4
GAPDHENSG00000111640.10124252.8688095311.707800.3825014.1814012.81050HepG2SLBP
GAPDHENSG00000111640.1053124.8674075642.27210-0.5098033.8643032.03790HepG2SMN1
GAPDHENSG00000111640.1081024.00300116291.08060-0.5213026.5828025.44300HepG2SRFBP1
GAPDHENSG00000111640.1037013.32160126051.60880-1.76790263.29330260.69910HepG2SRSF1
GAPDHENSG00000111640.1070733.8632098141.66710-0.472504.867104.07470HepG2SRSF5
GAPDHENSG00000111640.10117828.98880102550.060700.200303.989903.35040HepG2SRSF9
GAPDHENSG00000111640.1042907.47780100965.77060-1.2346096.7896094.91040HepG2SSB
GAPDHENSG00000111640.1082026.72980111609.59230-0.444308.900007.89110HepG2SUCLG1
GAPDHENSG00000111640.1037989.4294059558.80590-0.648709.270108.15410HepG2SUPV3L1
GAPDHENSG00000111640.1031531.2355087020.96590-1.4646013.4045011.27170HepG2TBRG4
GAPDHENSG00000111640.1024765.5841070772.99580-1.5149090.0051087.91500HepG2TIAL1
GAPDHENSG00000111640.1047191.8391064225.75080-0.444602.997401.46490HepG2TRA2A
GAPDHENSG00000111640.1085768.5239071407.562800.264302.072101.57080HepG2TRIM56
GAPDHENSG00000111640.1040656.0997088966.63000-1.129805.811504.91810HepG2U2AF1
GAPDHENSG00000111640.1083554.68880102794.37230-0.299002.088801.36780HepG2UBE2L3
GAPDHENSG00000111640.1020929.5028035181.00990-0.7493012.9362011.32520HepG2UCHL5
GAPDHENSG00000111640.1088351.8663075348.541600.229602.804502.10160HepG2UPF1
GAPDHENSG00000111640.1058202.7882077447.35820-0.4121011.347909.41120HepG2UTP18
GAPDHENSG00000111640.1085464.7137072745.973600.232405.192504.41550HepG2UTP3
GAPDHENSG00000111640.1043016.0902069827.20620-0.6989050.8913048.77160HepG2ZC3H8
GAPDHENSG00000111640.1093958.7077082868.895800.181104.658503.99580HepG2ZNF622
GAPDHENSG00000111640.1057224.9174070779.38520-0.306702.602301.42580K562ABCF1
GAPDHENSG00000111640.10140961.2285066625.186901.0811090.1105086.99380K562AGGF1
GAPDHENSG00000111640.10116157.6948073215.142800.6658013.6636011.06480K562AKAP8
GAPDHENSG00000111640.10132562.7799069327.543800.935106.148905.14880K562AKAP8L
GAPDHENSG00000111640.1046675.9388088914.33120-0.9297015.2661014.04010K562AQR
GAPDHENSG00000111640.1045701.3622053791.56760-0.235105.038803.72800K562BCLAF1
GAPDHENSG00000111640.1043650.2431054680.33380-0.325004.531802.58460K562CEBPZ
GAPDHENSG00000111640.1083704.1381052891.675100.662209.908407.69810K562CIRBP
GAPDHENSG00000111640.1041965.1066067929.57780-0.694805.196103.68660K562CNOT7
GAPDHENSG00000111640.1038139.8700050029.31110-0.391506.365905.17610K562CPSF6
GAPDHENSG00000111640.1034526.6038040808.91480-0.241203.654202.41520K562CSTF2
GAPDHENSG00000111640.10102755.37960128088.35640-0.317903.270802.21130K562CELF1
GAPDHENSG00000111640.1053193.7796062846.01810-0.240603.680902.28390K562DDX21
GAPDHENSG00000111640.1057177.1803047149.169600.278105.270202.82570K562DDX24
GAPDHENSG00000111640.1069164.5137079500.43970-0.200903.364402.65580K562DDX47
GAPDHENSG00000111640.1095175.8654074595.026400.351403.376702.39650K562DKC1
GAPDHENSG00000111640.1038064.6152052804.34900-0.472206.403204.38380K562DNAJC21
GAPDHENSG00000111640.1036716.6485055972.60010-0.608303.618301.58840K562DNAJC2
GAPDHENSG00000111640.1036218.7575046025.98650-0.345703.583002.53530K562EFTUD2
GAPDHENSG00000111640.1056077.6612048879.305200.198103.218801.90130K562EIF2S1
GAPDHENSG00000111640.1054837.7772066192.62770-0.271502.123801.47960K562EIF2S2
GAPDHENSG00000111640.1033972.2453049948.14890-0.556103.947602.72210K562EIF3A
GAPDHENSG00000111640.1064936.2023049268.439100.398303.134502.02870K562EIF3D
GAPDHENSG00000111640.1043146.0735028696.302800.588305.074004.01020K562EIF3G
GAPDHENSG00000111640.1034101.8224046489.88280-0.447106.128804.91720K562EIF4A3
GAPDHENSG00000111640.1050755.5355041867.607100.277604.210302.73320K562EIF4B
GAPDHENSG00000111640.1090221.47970104159.74490-0.207303.347402.31680K562EIF4G2
GAPDHENSG00000111640.1039189.8960054110.88220-0.465403.610901.70570K562ESF1
GAPDHENSG00000111640.1054695.3993040581.556100.430504.766902.99290K562EWSR1
GAPDHENSG00000111640.1048719.5384059492.66700-0.288203.431002.00220K562EXOSC5
GAPDHENSG00000111640.1086699.9673050885.306400.7687016.6799014.40020K562FIP1L1
GAPDHENSG00000111640.1039550.7178051323.96760-0.375903.579402.27220K562FKBP4
GAPDHENSG00000111640.1035205.3745050906.51010-0.532107.920806.42780K562FMR1
GAPDHENSG00000111640.1029984.3306043149.10650-0.525103.258802.25980K562FTO
GAPDHENSG00000111640.1056137.6807043859.036800.356006.110003.26880K562FUBP3
GAPDHENSG00000111640.1042935.0620048347.69170-0.171301.875901.35870K562FXR1
GAPDHENSG00000111640.1010671.3493028102.35540-1.396907.427406.15350K562G3BP2
GAPDHENSG00000111640.1051728.7520063238.72270-0.289802.751701.61610K562GLRX3
GAPDHENSG00000111640.1033542.5003047764.49290-0.509908.492907.09290K562GPKOW
GAPDHENSG00000111640.1060902.8824074052.59220-0.282002.717201.65450K562HNRNPA1
GAPDHENSG00000111640.1041882.6167063574.41500-0.602104.546302.52190K562HNRNPAB
GAPDHENSG00000111640.1036534.4367059082.23340-0.6935017.4889016.07030K562HNRNPC
GAPDHENSG00000111640.1057614.4596041857.524400.460802.780501.84840K562HNRNPM
GAPDHENSG00000111640.1066781.8915082011.53460-0.296404.854803.65950K562HNRNPU
GAPDHENSG00000111640.1071735.2691049386.847000.538503.827702.54490K562IGF2BP2
GAPDHENSG00000111640.1041235.0805062016.03460-0.588803.481601.86020K562ILF2
GAPDHENSG00000111640.1040425.8651051302.83100-0.343802.985401.43170K562ILF3
GAPDHENSG00000111640.1035414.4303049579.89280-0.485405.780703.65000K562KHDRBS1
GAPDHENSG00000111640.10112186.5733073570.287200.6086013.5673011.28850K562KIF1C
GAPDHENSG00000111640.1072182.1576057238.870000.334503.797702.12100K562LARP7
GAPDHENSG00000111640.1079451.2632059940.915900.406404.298102.38970K562LIN28B
GAPDHENSG00000111640.10108439.4548070427.759100.622603.944802.58840K562MAK16
GAPDHENSG00000111640.10105638.6098082417.802000.358002.121301.34140K562MBNL1
GAPDHENSG00000111640.1035369.6151046623.97640-0.398605.847604.54620K562METAP2
GAPDHENSG00000111640.1089191.76430111021.29820-0.315903.493802.22470K562MSI2
GAPDHENSG00000111640.1047170.7317066487.06610-0.4952020.9235018.99660K562MTPAP
GAPDHENSG00000111640.1086670.0188057769.224000.585105.886804.42540K562NAA15
GAPDHENSG00000111640.1088025.26030113939.37460-0.372304.654202.68310K562NOL12
GAPDHENSG00000111640.1056099.2176073874.24720-0.3971027.4382025.48500K562NSUN2
GAPDHENSG00000111640.10100848.3985047243.906601.093904.271002.97040K562PABPN1
GAPDHENSG00000111640.1042251.9003075674.30040-0.8408014.7707012.88780K562PCBP3
GAPDHENSG00000111640.1071782.1036057689.144400.315203.493901.86490K562PHF6
GAPDHENSG00000111640.1057383.92760107028.25880-0.8993031.9178028.93250K562PNPT1
GAPDHENSG00000111640.1031600.1800058043.43270-0.8772024.3902022.20340K562POLR2G
GAPDHENSG00000111640.1085612.9658057770.128200.567406.955005.54890K562PPIG
GAPDHENSG00000111640.1096404.0555056152.792000.779603.040701.49410K562PPP1R8
GAPDHENSG00000111640.1035801.6925044788.87520-0.323103.298702.47810K562PRPF8
GAPDHENSG00000111640.1063449.56010113644.02230-0.8408021.6320019.25990K562PUF60
GAPDHENSG00000111640.10102094.95080120893.29070-0.243803.432202.23490K562PUM1
GAPDHENSG00000111640.1091310.35010118436.13540-0.375309.439807.64750K562PUM2
GAPDHENSG00000111640.10171618.4252068746.633701.319705.647304.90440K562PUS1
GAPDHENSG00000111640.10110485.3152066989.259900.7218018.6731017.09590K562RBM15
GAPDHENSG00000111640.1067065.5931048344.932600.472106.894905.32940K562RCC2
GAPDHENSG00000111640.1033290.5890045614.20370-0.454404.646803.58630K562RPS19
GAPDHENSG00000111640.1038299.8721031264.665100.292702.593901.62630K562RPS3
GAPDHENSG00000111640.1023066.4212045430.05270-0.9779012.3965010.25860K562SF3B1
GAPDHENSG00000111640.1039807.6771054084.62830-0.442205.532203.72220K562SLBP
GAPDHENSG00000111640.1061905.6370045828.523100.433706.075404.39230K562SRFBP1
GAPDHENSG00000111640.1063185.0297074680.63090-0.241207.080605.65950K562SRPK2
GAPDHENSG00000111640.1043287.9143056079.85650-0.373504.585303.05970K562SRSF7
GAPDHENSG00000111640.1032265.1657060560.10850-0.908406.063903.68280K562STIP1
GAPDHENSG00000111640.1081447.9106099154.46930-0.283804.578202.68800K562SUCLG1
GAPDHENSG00000111640.1034218.5861043350.46140-0.341303.019001.95510K562SUPV3L1
GAPDHENSG00000111640.1071557.6557054143.115500.402205.304703.89240K562TRIM56
GAPDHENSG00000111640.1018873.8779028110.59500-0.574702.544401.77400K562U2AF2
GAPDHENSG00000111640.1049042.8300078330.33990-0.6755037.2778035.00050K562UPF1
GAPDHENSG00000111640.1056505.8073067024.94590-0.246302.662801.80160K562WDR3
GAPDHENSG00000111640.1036219.4500046739.09850-0.367903.208501.87370K562XRN2
GAPDHENSG00000111640.1081625.00340100152.14450-0.295102.118301.37310K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GAPDH is not available on ENCORE database.





4 RBPs can affect the splicing of GAPDH :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGAPDHENSG00000111640.10chr12+664397566440136643706664373566456596645706-0.320000.000350.00502excludedK562AQR
MXEGAPDHENSG00000111640.10chr12+664647466465566646749664716266462666646382664726666475370.072000.000100.007431includedK562LIN28B
MXEGAPDHENSG00000111640.10chr12+66464746646556664674966471626646266664638266472666647525-0.073000.000260.040792includedK562SMNDC1
MXEGAPDHENSG00000111640.10chr12+66464746646556664701366471626646278664638266472666647525-0.073000.000270.040792includedK562SMNDC1
MXEGAPDHENSG00000111640.10chr12+66464746646556664674966471626646266664638266472666647537-0.065000.000000.000022includedK562SBDS

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GAPDH is not avaliable on ENCORE database.