CD3D

General Information

Gene Name       : CD3D
Gene ID             : ENSG00000167286.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CD3D)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CD3DENSG00000167286.90.000.090.04ENCSR000AEF
HepG2CD3DENSG00000167286.90.900.920.91ENCSR985KAT
K562CD3DENSG00000167286.954.5245.1649.84ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CD3D is not avaliable on ENCORE database.



Proteins bound to RNA
  • CD3D RNA is bound by 1 proteins.  







eCLIP assay for CD3D is not avaliable on ENCORE database.





1 proteins are bound to CD3D RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11118213266118213302-CDS,intron-Distal3.669545.23852K562DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CD3D is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CD3D is not available on ENCORE database.

  • 152 RBPs can affect the levels of CD3D.  








The Knockdown/knockout RNA-Seq assay for CD3D is not available on ENCORE database.





152 RBPs can affect the gene expression of CD3D :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CD3DENSG00000167286.5125.4614029.640002.0815010.814508.88430HepG2AATF
CD3DENSG00000167286.5116.8142024.506402.2529013.1566012.03570HepG2ACO1
CD3DENSG00000167286.5270.1061029.090903.2148028.4292026.93840HepG2AKAP1
CD3DENSG00000167286.5140.6393044.516301.659508.467506.75090HepG2AKAP8
CD3DENSG00000167286.5125.7138024.072002.3846012.4304010.86410HepG2ASCC1
CD3DENSG00000167286.594.7709038.952501.282604.731803.87460HepG2AUH
CD3DENSG00000167286.5103.1638023.057402.161509.696408.66300HepG2BOP1
CD3DENSG00000167286.557.0384026.842701.087302.554301.37260HepG2BUD13
CD3DENSG00000167286.557.6863026.501201.122102.472601.74020HepG2CALR
CD3DENSG00000167286.5156.0379061.934901.333005.941604.48310HepG2CCAR1
CD3DENSG00000167286.598.0782021.168502.211909.559708.35610HepG2CPSF6
CD3DENSG00000167286.560.8202029.509801.043302.443001.40800HepG2CPSF7
CD3DENSG00000167286.567.9334030.389401.160502.811101.44080HepG2CSTF2T
CD3DENSG00000167286.581.3992047.732500.769902.026301.45990HepG2CELF1
CD3DENSG00000167286.524.8798051.32820-1.044802.177501.50780HepG2DAZAP1
CD3DENSG00000167286.58.0485032.60450-2.018303.272702.53800HepG2DDX21
CD3DENSG00000167286.552.8308020.655901.354703.040301.61980HepG2DDX52
CD3DENSG00000167286.5387.0247023.096604.0666044.5772042.12090HepG2DDX55
CD3DENSG00000167286.5336.0119023.932803.8114045.4839043.42330HepG2DDX6
CD3DENSG00000167286.55.7604023.44300-2.024902.493201.84490HepG2DKC1
CD3DENSG00000167286.5114.2363030.092101.924508.816106.91790HepG2AGO1
CD3DENSG00000167286.5130.3690023.015702.5018013.5282012.28520HepG2EIF2S1
CD3DENSG00000167286.5112.7893020.028902.4934011.7805010.06280HepG2EIF3D
CD3DENSG00000167286.53.6837025.43910-2.787803.741103.00190HepG2EIF4A3
CD3DENSG00000167286.570.1098024.760701.501503.491202.72240HepG2EIF4B
CD3DENSG00000167286.584.3290023.936901.816706.835005.52530HepG2EWSR1
CD3DENSG00000167286.5223.5512036.143102.6287013.1221011.62890HepG2FIP1L1
CD3DENSG00000167286.595.0487042.132301.173603.652502.37210HepG2FUS
CD3DENSG00000167286.5188.5169023.804902.9853024.0260022.15360HepG2G3BP1
CD3DENSG00000167286.52.3558025.26340-3.422704.437603.29750HepG2G3BP2
CD3DENSG00000167286.5119.1906025.891702.2026010.110008.12910HepG2GNB2L1
CD3DENSG00000167286.595.6277039.696601.268303.967302.10560HepG2GTF2F1
CD3DENSG00000167286.588.5064023.389601.919804.402503.18900HepG2HDGF
CD3DENSG00000167286.55.6545036.39770-2.686404.499903.70230HepG2HNRNPA1
CD3DENSG00000167286.5146.8473047.170101.6383010.131108.55170HepG2HNRNPA2B1
CD3DENSG00000167286.539.3808087.69510-1.155003.724301.95230HepG2HNRNPD
CD3DENSG00000167286.599.5081048.495201.036903.033401.73830HepG2HSPD1
CD3DENSG00000167286.556.7766024.199501.230202.619401.96040HepG2IGF2BP2
CD3DENSG00000167286.5103.8359022.912002.180009.622506.79320HepG2CCAR2
CD3DENSG00000167286.571.5601025.387401.494903.826902.48570HepG2LARP7
CD3DENSG00000167286.57.4419025.66350-1.786002.186201.60150HepG2MAGOH
CD3DENSG00000167286.5152.8636020.968602.8658013.0638010.94130HepG2METAP2
CD3DENSG00000167286.5106.8334050.896701.069604.069303.14430HepG2NOL12
CD3DENSG00000167286.568.9384023.535101.550404.394203.49770HepG2PABPC4
CD3DENSG00000167286.5125.6817039.808901.658508.982207.59620HepG2PARN
CD3DENSG00000167286.541.1619090.80270-1.141403.525201.80760HepG2PNPT1
CD3DENSG00000167286.510.6640035.87130-1.750103.260902.46590HepG2PPIL4
CD3DENSG00000167286.52.2339017.98790-3.009403.104002.29030HepG2PRPF4
CD3DENSG00000167286.585.9911028.921201.572003.468501.48320HepG2PSIP1
CD3DENSG00000167286.556.0050017.469101.680704.592703.92730HepG2PTBP1
CD3DENSG00000167286.5113.4665048.584201.223604.798804.03980HepG2PUF60
CD3DENSG00000167286.593.8992051.536200.865402.474101.83990HepG2PUM2
CD3DENSG00000167286.561.7989018.908601.708404.576303.80150HepG2QKI
CD3DENSG00000167286.5254.8125038.495502.7266019.6310017.91810HepG2RAVER1
CD3DENSG00000167286.5142.2331024.200702.5550016.9209015.10330HepG2RBM15
CD3DENSG00000167286.5366.2952037.377603.2927053.0347051.32900HepG2RBM22
CD3DENSG00000167286.538.8352017.164901.177801.994701.41510HepG2RBM25
CD3DENSG00000167286.544.8663097.80110-1.124203.559301.82900HepG2RBM47
CD3DENSG00000167286.5110.4550049.066901.170504.356903.52890HepG2RPLP0
CD3DENSG00000167286.52.1702037.80590-4.122707.983406.45260HepG2RPS10
CD3DENSG00000167286.535.58780101.72930-1.515305.691304.54200HepG2RPS3A
CD3DENSG00000167286.580.7984017.588602.199605.741004.64920HepG2RRP9
CD3DENSG00000167286.529.5750095.79380-1.695606.423504.45630HepG2SART3
CD3DENSG00000167286.544.5706096.59680-1.115903.353701.64690HepG2SBDS
CD3DENSG00000167286.519.8258046.58200-1.232402.457201.79010HepG2SLBP
CD3DENSG00000167286.587.8317037.550801.225803.091301.39920HepG2SLTM
CD3DENSG00000167286.578.8727041.767400.917102.606001.97850HepG2SMN1
CD3DENSG00000167286.5125.4546039.226201.677208.263006.56380HepG2SMNDC1
CD3DENSG00000167286.592.4741025.222201.874305.824504.68280HepG2SNRNP70
CD3DENSG00000167286.5180.6997042.218002.0976016.4050015.45270HepG2SRFBP1
CD3DENSG00000167286.53.0740018.97810-2.626102.443901.99210HepG2SRSF1
CD3DENSG00000167286.5109.4337024.389002.165708.532906.69350HepG2SRSF3
CD3DENSG00000167286.586.7780044.755100.955203.108302.37670HepG2SRSF7
CD3DENSG00000167286.5102.2466015.442902.7269015.7937014.66950HepG2SRSF9
CD3DENSG00000167286.52.1438036.65760-4.095908.003407.21830HepG2SSB
CD3DENSG00000167286.5114.4959024.436302.2281012.5028010.62360HepG2SUPT6H
CD3DENSG00000167286.597.5124022.982602.084905.853504.92660HepG2SUPV3L1
CD3DENSG00000167286.58.8084047.43340-2.428905.004503.60300HepG2TBRG4
CD3DENSG00000167286.511.9533039.07900-1.709003.198502.66710HepG2TIAL1
CD3DENSG00000167286.587.4076039.428801.148404.140803.47910HepG2TRIM56
CD3DENSG00000167286.574.8156013.967702.421104.676103.36950HepG2U2AF2
CD3DENSG00000167286.569.121807.942103.1215012.1479010.87410HepG2UPF1
CD3DENSG00000167286.539.816908.161902.286304.915303.55900HepG2UTP18
CD3DENSG00000167286.584.820807.667503.4675015.2615014.02290HepG2UTP3
CD3DENSG00000167286.55.4166022.62420-2.062402.185801.53500HepG2XRN2
CD3DENSG00000167286.552.834308.734502.596607.662306.86970HepG2ZNF622
CD3DENSG00000167286.59.4410038.45210-2.026004.022302.42910HepG2ZRANB2
CD3DENSG00000167286.5748.42220322.257401.2155017.0209014.25720K562ABCF1
CD3DENSG00000167286.5120.12700189.36900-0.656603.403301.70560K562AKAP1
CD3DENSG00000167286.5453.80040147.036501.6258012.9383011.37460K562AKAP8L
CD3DENSG00000167286.565.14390445.75290-2.7745037.3097035.35990K562AQR
CD3DENSG00000167286.5312.56630185.041100.756206.398603.33930K562ASCC1
CD3DENSG00000167286.5314.93640211.778400.572403.455601.95070K562BCCIP
CD3DENSG00000167286.5406.42180204.651500.9897010.760708.85890K562BCLAF1
CD3DENSG00000167286.5405.57950224.507200.853106.291204.08020K562BUD13
CD3DENSG00000167286.5205.46800137.358500.580902.459101.47630K562CCAR1
CD3DENSG00000167286.5431.83860168.917401.354108.488106.41420K562CCDC124
CD3DENSG00000167286.51195.13320345.968001.7884021.9712019.18680K562CIRBP
CD3DENSG00000167286.5146.76320289.68520-0.981004.753603.31120K562CNOT7
CD3DENSG00000167286.5597.99990325.474400.8775011.590609.33200K562CPEB4
CD3DENSG00000167286.5302.31250144.738401.062506.083903.43570K562DDX1
CD3DENSG00000167286.5159.96540257.88350-0.689004.047402.56500K562DDX21
CD3DENSG00000167286.5318.38270191.875800.730505.157603.67300K562DDX3X
CD3DENSG00000167286.5220.07200336.78990-0.613904.504103.69990K562DDX47
CD3DENSG00000167286.5394.08730197.918700.993506.416103.12280K562DDX52
CD3DENSG00000167286.5238.49620147.708500.691103.462901.94970K562DNAJC21
CD3DENSG00000167286.5319.94000200.802000.671903.219801.83030K562EEF2
CD3DENSG00000167286.5390.17850207.855300.908504.574701.82240K562AGO1
CD3DENSG00000167286.51192.82510272.832902.1282045.1777042.99220K562EIF2S2
CD3DENSG00000167286.579.08010139.71890-0.821102.292801.38600K562EIF3A
CD3DENSG00000167286.551.05110200.46100-1.9733016.3625014.23430K562EIF4A3
CD3DENSG00000167286.5361.60130512.38700-0.502803.529502.47000K562EIF4G2
CD3DENSG00000167286.5193.67440294.76630-0.605903.631402.15260K562EXOSC5
CD3DENSG00000167286.5586.95620172.716901.7647023.7158020.04650K562FAM120A
CD3DENSG00000167286.5435.62380231.708600.910707.241305.80720K562FIP1L1
CD3DENSG00000167286.5522.20360295.971300.819107.143305.73590K562FMR1
CD3DENSG00000167286.5398.44720250.845500.667504.235003.08330K562FTO
CD3DENSG00000167286.5111.63770208.47070-0.901005.342604.53970K562FXR1
CD3DENSG00000167286.5184.22810308.63260-0.744405.028203.02460K562G3BP1
CD3DENSG00000167286.5142.76330234.75960-0.717603.176702.41030K562G3BP2
CD3DENSG00000167286.5162.20520255.39820-0.654903.575202.28230K562GLRX3
CD3DENSG00000167286.5227.95640363.50210-0.673202.418601.70930K562GRSF1
CD3DENSG00000167286.584.22860273.28930-1.698006.664405.04580K562HNRNPA1
CD3DENSG00000167286.5103.62640216.92410-1.065806.196005.33830K562HNRNPC
CD3DENSG00000167286.5207.37090310.20670-0.581003.474601.36270K562HNRNPH1
CD3DENSG00000167286.5626.99250322.354300.959709.690407.32650K562HNRNPK
CD3DENSG00000167286.5201.35360304.36540-0.596103.486002.28180K562HNRNPL
CD3DENSG00000167286.590.53490302.69420-1.741307.975606.46390K562HNRNPU
CD3DENSG00000167286.5484.02670322.991000.583503.374002.19840K562IGF2BP2
CD3DENSG00000167286.5227.74890328.44790-0.528203.127901.84280K562IGF2BP3
CD3DENSG00000167286.5324.90330210.049100.629203.679202.02100K562LARP7
CD3DENSG00000167286.5117.20100339.25880-1.5334017.9051015.61270K562MAGOH
CD3DENSG00000167286.5221.85620338.54140-0.609704.136802.98990K562MATR3
CD3DENSG00000167286.5465.68930271.136200.780206.708705.31190K562METAP2
CD3DENSG00000167286.5107.93820268.51770-1.3148012.3202010.75480K562MTPAP
CD3DENSG00000167286.5254.93730122.549801.056704.013602.89370K562NAA15
CD3DENSG00000167286.573.41420374.94290-2.3525029.7453027.25260K562PCBP3
CD3DENSG00000167286.5436.70890299.532700.543903.345801.61030K562PKM
CD3DENSG00000167286.5278.85300526.48940-0.916909.115506.79230K562PNPT1
CD3DENSG00000167286.543.22610287.60820-2.7341034.0250031.55540K562POLR2G
CD3DENSG00000167286.5535.44880263.081501.0251011.311809.31740K562PPIG
CD3DENSG00000167286.5755.54530311.135401.279909.475706.51950K562PRPF6
CD3DENSG00000167286.5444.59370329.625500.431602.810002.14120K562PTBP1
CD3DENSG00000167286.5450.14190594.58560-0.401502.405301.41570K562PUM1
CD3DENSG00000167286.51066.67610582.642100.8723016.1057013.85110K562PUM2
CD3DENSG00000167286.5562.70010145.897201.947306.673205.87220K562PUS1
CD3DENSG00000167286.5122.12350344.85600-1.497707.678605.08250K562RBM17
CD3DENSG00000167286.5413.23310315.966600.387102.065301.34410K562RBM22
CD3DENSG00000167286.5462.47070177.444201.3819017.8109015.31990K562RCC2
CD3DENSG00000167286.5525.99350332.528900.661505.204903.64500K562NELFE
CD3DENSG00000167286.591.41090208.26940-1.188004.832702.74970K562RPS10
CD3DENSG00000167286.594.13690192.28680-1.030404.714003.64520K562RPS19
CD3DENSG00000167286.5228.75980100.919001.180506.028204.47990K562RPS3
CD3DENSG00000167286.592.62110256.22120-1.4680011.817709.70000K562SAFB
CD3DENSG00000167286.5167.31960264.92290-0.663003.072801.54380K562SDAD1
CD3DENSG00000167286.5422.40390294.392000.520803.806602.85820K562SF3A3
CD3DENSG00000167286.5120.80710244.10510-1.014807.645306.17950K562SF3B4
CD3DENSG00000167286.5192.08980301.61080-0.650904.578203.40750K562SRPK2
CD3DENSG00000167286.5129.99820323.16450-1.3138012.6869011.17060K562SRSF1
CD3DENSG00000167286.5203.18300327.38450-0.688204.992502.90990K562SRSF9
CD3DENSG00000167286.596.91430218.16420-1.170603.623102.12750K562SSB
CD3DENSG00000167286.5350.48410487.79180-0.476903.010101.43630K562SUCLG1
CD3DENSG00000167286.577.53490288.45890-1.8954020.9498018.80720K562SYNCRIP
CD3DENSG00000167286.5168.78840327.01710-0.954107.380506.16450K562TARDBP
CD3DENSG00000167286.5466.84270244.699200.931808.626305.92230K562TBRG4
CD3DENSG00000167286.5296.00350166.614200.829005.212402.94540K562TFIP11
CD3DENSG00000167286.5420.85840270.875300.635603.415401.84470K562TRIP6
CD3DENSG00000167286.5395.19040270.525000.546703.774102.28020K562TROVE2
CD3DENSG00000167286.5161.53770364.22710-1.173007.768705.02580K562TUFM
CD3DENSG00000167286.5135.53500227.55430-0.747503.531502.26100K562U2AF1
CD3DENSG00000167286.5957.10480630.275700.602607.055504.92160K562UBE2L3
CD3DENSG00000167286.5101.83840193.44310-0.925604.537703.20190K562UCHL5
CD3DENSG00000167286.5126.60360290.09240-1.196205.074502.80680K562UPF2
CD3DENSG00000167286.5152.12560270.68680-0.831405.646504.37670K562WDR3
CD3DENSG00000167286.5313.39470148.352601.078903.844501.77260K562XPO5
CD3DENSG00000167286.5163.44950311.35460-0.929704.511601.50050K562XRCC5
CD3DENSG00000167286.5169.73400293.13090-0.788303.208901.48320K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CD3D is not available on ENCORE database.





6 RBPs can affect the splicing of CD3D :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECD3DENSG00000167286.5chr11-1182104891182106211182101651182102091182110891182113080.290000.001220.08758includedHepG2G3BP1
SECD3DENSG00000167286.5chr11-1182115841182116461182110891182113081182132671182133460.090000.000010.00041includedK562SRSF1
SECD3DENSG00000167286.5chr11-118211089118211308118210489118210621118213267118213346-0.101000.001200.02439excludedK562SRSF1
SECD3DENSG00000167286.5chr11-1182104891182106211182101651182102091182110891182113080.279000.000520.03659includedHepG2AKAP1
SECD3DENSG00000167286.5chr11-1182104891182106211182101651182102091182110891182113080.290000.000040.00720includedHepG2DDX6
SECD3DENSG00000167286.5chr11-118210489118210621118210165118210209118211089118211308-0.303000.000070.00221excludedK562U2AF2
A3SSCD3DENSG00000167286.5chr11-1182101651182102391182101651182102091182104891182106210.308000.000300.00233longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CD3D is not avaliable on ENCORE database.