C3

General Information

Gene Name : C3
Gene ID : ENSG00000125730.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: C3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	C3	ENSG00000125730.16	1.90	0.54	1.22	ENCSR000AEF
HepG2	C3	ENSG00000125730.16	2716.58	1721.21	2218.89	ENCSR985KAT
K562	C3	ENSG00000125730.16	3.11	1.60	2.35	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for C3 is not avaliable on ENCORE database.

Proteins bound to RNA

C3 RNA is bound by 45 proteins.

CanvasJS.com

eCLIP assay for C3 is not avaliable on ENCORE database.

45 proteins are bound to C3 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	6678027	6678031	-	3'-UTR,CDS,intron-Distal	4.86437	400.00000	HepG2	SND1
chr19	6677968	6678008	-	3'-UTR,CDS,intron-Distal	4.30765	400.00000	HepG2	SND1
chr19	6678022	6678027	-	3'-UTR,CDS,intron-Distal	4.86378	400.00000	HepG2	SND1
chr19	6678009	6678022	-	3'-UTR,CDS,intron-Distal	4.60395	400.00000	HepG2	SND1
chr19	6720633	6720660	-	5'-UTR,intron-Distal	5.66085	400.00000	HepG2	PCBP2
chr19	6720616	6720625	-	5'-UTR,intron-Distal	5.44073	400.00000	HepG2	PCBP2
chr19	6720586	6720616	-	5'-UTR,CDS,intron-Distal	4.89538	400.00000	HepG2	PCBP2
chr19	6720577	6720662	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.08259	400.00000	HepG2	PCBP1
chr19	6710707	6710727	-	CDS,intron-Distal	3.36611	400.00000	HepG2	SND1
chr19	6686807	6686843	-	CDS,intron-Distal	4.33307	400.00000	HepG2	SND1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 763 entries

eCLIP assay for C3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for C3 is not available on ENCORE database.
150 RBPs can affect the levels of C3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for C3 is not available on ENCORE database.

150 RBPs can affect the gene expression of C3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
C3	ENSG00000125730.12	77103.06280	203775.68710	-1.40210	170.84770	168.64290	HepG2	SRSF1
C3	ENSG00000125730.12	61130.46150	203078.98090	-1.73210	135.22000	132.09740	HepG2	QKI
C3	ENSG00000125730.12	166307.98510	65067.24270	1.35380	114.71090	111.64760	HepG2	HNRNPF
C3	ENSG00000125730.12	214163.79710	109546.06900	0.96710	103.42000	100.65370	HepG2	SLBP
C3	ENSG00000125730.12	37504.46150	212692.59580	-2.50360	96.46640	94.10270	HepG2	AKAP1
C3	ENSG00000125730.12	148234.54650	63928.24690	1.21330	95.57090	92.97520	HepG2	SRSF7
C3	ENSG00000125730.12	181.74090	974.87150	-2.42330	93.94000	90.53840	K562	SRPK2
C3	ENSG00000125730.12	77488.34380	160750.94350	-1.05280	92.16870	89.48170	HepG2	UTP3
C3	ENSG00000125730.12	215439.12500	58694.34000	1.87590	84.28820	81.44340	HepG2	CPSF6
C3	ENSG00000125730.12	195.75140	909.80660	-2.21650	81.39290	78.46290	K562	WDR43
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 183 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for C3 is not available on ENCORE database.

2 RBPs can affect the splicing of C3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
MXE	C3	ENSG00000125730.12	chr19	-	6719221	6719298	6719362	6719414	6718257	6718423	6720526	6720693	0.11100	0.00003	0.00082	1included	HepG2	SFPQ
MXE	C3	ENSG00000125730.12	chr19	-	6719221	6719298	6719362	6719414	6718257	6718423	6720526	6720693	0.09500	0.00045	0.01966	1included	HepG2	RBFOX2

Showing 1 to 2 of 2 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

C3

General Information

Functions

Localization

Domains (AlphaFold: C3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for C3 is not avaliable on ENCORE database.

45 proteins are bound to C3 RNA:

eCLIP assay for C3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for C3 is not available on ENCORE database.

150 RBPs can affect the gene expression of C3 :

The Knockdown/knockout RNA-Seq assay for C3 is not available on ENCORE database.

2 RBPs can affect the splicing of C3 :

The Knockdown/knockout RNA-Seq assay for C3 is not avaliable on ENCORE database.