TWF1

General Information

Gene Name       : TWF1
Gene ID             : ENSG00000151239.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TWF1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TWF1ENSG00000151239.1319.4711.9015.68ENCSR000AEF
HepG2TWF1ENSG00000151239.1318.8345.8932.36ENCSR985KAT
K562TWF1ENSG00000151239.1312.8915.7514.32ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TWF1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TWF1 RNA is bound by 3 proteins.  







eCLIP assay for TWF1 is not avaliable on ENCORE database.





3 proteins are bound to TWF1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr124419994044200040-5'-UTR,CDS,intron-Distal4.153015.93840HepG2PRPF8
chr124420000344200024-CDS,intron-Distal3.278565.46476K562AQR
chr124419997344200003-CDS,intron-Distal3.170185.69184K562AQR
chr124419819844198273-intron-Distal,intron-Proximal4.010923.31283K562PRPF8
chr124419065444190722-intron-Distal,intron-Proximal4.046344.31512K562KHSRP
chr124419435844194440-intron-Distal,intron-Proximal4.197404.07352K562KHSRP
chr124419306344193162-intron-Distal,intron-Proximal5.123636.44303K562AQR
chr124419062244190725-intron-Distal,intron-Proximal4.010923.31283K562PRPF8
chr124419819644198279-intron-Distal,intron-Proximal4.509194.76003K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TWF1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TWF1 is not available on ENCORE database.

  • 145 RBPs can affect the levels of TWF1.  








The Knockdown/knockout RNA-Seq assay for TWF1 is not available on ENCORE database.





145 RBPs can affect the gene expression of TWF1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TWF1ENSG00000151239.92100.691801506.743400.4793010.480609.45650HepG2ACO1
TWF1ENSG00000151239.91047.294801513.39290-0.531104.810103.54340HepG2ADAR
TWF1ENSG00000151239.94435.233302238.991700.9861014.9510013.81410HepG2AKAP1
TWF1ENSG00000151239.9915.457301619.46910-0.823005.863404.47520HepG2BCCIP
TWF1ENSG00000151239.91713.940102473.38400-0.529202.256101.38410HepG2CCAR1
TWF1ENSG00000151239.92502.753602069.998600.273802.069801.49990HepG2CELF1
TWF1ENSG00000151239.9767.090101393.54360-0.8613025.2564023.35950HepG2DDX19B
TWF1ENSG00000151239.9359.623001126.91730-1.6478038.5866036.50560HepG2DDX21
TWF1ENSG00000151239.93694.826202144.878800.7845011.1926010.01280HepG2DDX3X
TWF1ENSG00000151239.92322.397901654.055000.489502.359401.45680HepG2DDX59
TWF1ENSG00000151239.9599.335001510.35590-1.3335029.1191027.22020HepG2DNAJC2
TWF1ENSG00000151239.91293.420501008.502500.358902.657401.56820HepG2EFTUD2
TWF1ENSG00000151239.91349.95960982.004800.459003.840302.78610HepG2EIF3D
TWF1ENSG00000151239.9959.236201957.53730-1.0291014.2800012.85250HepG2EIF4A3
TWF1ENSG00000151239.92877.621802195.913500.390004.009503.03480HepG2EIF4G1
TWF1ENSG00000151239.9767.032401472.39960-0.9408017.6099015.64280HepG2EWSR1
TWF1ENSG00000151239.91358.052701073.741200.338802.776301.63010HepG2FASTKD2
TWF1ENSG00000151239.91296.825701832.04060-0.498504.175903.36790HepG2G3BP1
TWF1ENSG00000151239.9585.832601651.27590-1.4950016.3861014.95260HepG2GPKOW
TWF1ENSG00000151239.92127.689601473.164700.530302.781401.41050HepG2HLTF
TWF1ENSG00000151239.91189.234001538.58950-0.371602.358701.75820HepG2HNRNPA1
TWF1ENSG00000151239.91636.450202045.77130-0.322102.756301.82270HepG2HNRNPA2B1
TWF1ENSG00000151239.91314.909201711.33720-0.380203.458802.68940HepG2HNRNPC
TWF1ENSG00000151239.91125.422301628.09500-0.532708.462107.29750HepG2HNRNPF
TWF1ENSG00000151239.91574.123402028.15350-0.365603.052202.34620HepG2HNRNPL
TWF1ENSG00000151239.91429.967601700.02730-0.249602.076101.54180HepG2HNRNPU
TWF1ENSG00000151239.91016.591401603.22660-0.657209.925508.63670HepG2IGF2BP1
TWF1ENSG00000151239.91655.619301261.395000.392303.951902.00770HepG2CCAR2
TWF1ENSG00000151239.91154.777301377.38190-0.254303.085702.01040HepG2KIF1C
TWF1ENSG00000151239.91635.272202609.98910-0.674503.203702.30770HepG2LARP4
TWF1ENSG00000151239.9727.511001975.43920-1.4411029.5958027.63060HepG2MAGOH
TWF1ENSG00000151239.9927.487801199.77760-0.371402.893202.06790HepG2MSI2
TWF1ENSG00000151239.9877.866102207.56530-1.3304015.4788013.74700HepG2NOL12
TWF1ENSG00000151239.91300.449401811.05720-0.477804.078603.21350HepG2PABPC4
TWF1ENSG00000151239.91319.913101682.80980-0.350404.288303.26250HepG2PARN
TWF1ENSG00000151239.91066.283601516.29880-0.508005.096004.12450HepG2PPIL4
TWF1ENSG00000151239.91942.625001228.747500.660708.411307.08750HepG2PRPF8
TWF1ENSG00000151239.91180.038201534.72280-0.379105.919005.07910HepG2PUS1
TWF1ENSG00000151239.96490.021001404.294002.2083025.5345023.60580HepG2RAVER1
TWF1ENSG00000151239.91707.797002067.77130-0.275902.972002.44060HepG2RBM22
TWF1ENSG00000151239.92112.096001706.952500.307202.779402.10340HepG2RBM25
TWF1ENSG00000151239.91231.025901799.98250-0.5481010.936809.83500HepG2RECQL
TWF1ENSG00000151239.9775.48520955.47770-0.301101.988601.45930HepG2RPS19
TWF1ENSG00000151239.91141.027501548.51030-0.440502.665501.88050HepG2RPS3A
TWF1ENSG00000151239.91586.240101215.535600.383903.081702.25850HepG2RRP9
TWF1ENSG00000151239.9485.320301513.98430-1.6413037.9573035.99900HepG2SAFB2
TWF1ENSG00000151239.91876.968601483.750500.339101.985501.41250HepG2SF3A3
TWF1ENSG00000151239.92133.021201808.068100.238302.693302.10880HepG2SF3B4
TWF1ENSG00000151239.91293.362002020.07890-0.643307.872706.78120HepG2SLBP
TWF1ENSG00000151239.92978.943502335.469100.351006.871906.18050HepG2SRFBP1
TWF1ENSG00000151239.93318.934801887.208600.8144031.0255029.81850HepG2SRSF1
TWF1ENSG00000151239.91149.515501599.48800-0.476607.252006.20840HepG2SRSF7
TWF1ENSG00000151239.91726.233402027.73600-0.232202.828002.31130HepG2SSB
TWF1ENSG00000151239.9710.89100990.19120-0.478102.804401.56010HepG2STAU1
TWF1ENSG00000151239.91839.503901312.338400.487102.739401.54260HepG2SUB1
TWF1ENSG00000151239.91246.545401535.64700-0.300902.082801.44140HepG2TARDBP
TWF1ENSG00000151239.91050.979701652.11570-0.652606.493905.78760HepG2TIAL1
TWF1ENSG00000151239.9889.299401410.00860-0.665004.797002.88500HepG2TRA2A
TWF1ENSG00000151239.91147.751701666.64660-0.538105.956605.18500HepG2TRIM56
TWF1ENSG00000151239.9759.887501267.95620-0.738608.616807.50260HepG2U2AF1
TWF1ENSG00000151239.9374.88750936.49110-1.3208013.2663011.62790HepG2UCHL5
TWF1ENSG00000151239.9733.463301451.89070-0.985106.134504.59360HepG2UPF2
TWF1ENSG00000151239.91981.431401270.410000.6411011.026809.95850HepG2UTP3
TWF1ENSG00000151239.92040.097501380.863900.563003.825002.33210HepG2XRCC5
TWF1ENSG00000151239.92045.174601544.323900.405102.257001.30360HepG2XRCC6
TWF1ENSG00000151239.9717.115501560.39090-1.121609.710508.36950HepG2XRN2
TWF1ENSG00000151239.91176.03880808.382500.540705.172603.49050K562ABCF1
TWF1ENSG00000151239.9627.07410468.170000.421503.473002.85020K562AGGF1
TWF1ENSG00000151239.9763.16050501.500900.605607.728005.20450K562AKAP1
TWF1ENSG00000151239.91263.12160514.423701.295907.811205.92580K562AKAP8
TWF1ENSG00000151239.91032.73380487.146101.0839017.8142015.88000K562AKAP8L
TWF1ENSG00000151239.91391.86500918.694000.599307.563105.41660K562APOBEC3C
TWF1ENSG00000151239.93681.10370942.782301.9650073.2322070.58910K562AQR
TWF1ENSG00000151239.9757.75550511.122200.568006.290404.84250K562ATP5C1
TWF1ENSG00000151239.9416.29310603.72300-0.536304.890103.05890K562BCCIP
TWF1ENSG00000151239.91445.82440507.386301.5106031.5036028.74740K562BOP1
TWF1ENSG00000151239.9877.80060559.508300.649605.854004.10580K562CCDC124
TWF1ENSG00000151239.91356.28530635.719901.0931013.0156010.58460K562CIRBP
TWF1ENSG00000151239.91101.32310584.274500.914406.677104.98190K562CNOT7
TWF1ENSG00000151239.9718.29130539.451000.413003.099002.26840K562CPSF6
TWF1ENSG00000151239.92906.021201279.929101.1829038.4471035.57560K562CELF1
TWF1ENSG00000151239.9888.92440464.273200.937005.220602.64690K562DAZAP1
TWF1ENSG00000151239.9354.59130185.009600.938505.380102.85250K562DDX1
TWF1ENSG00000151239.9661.90390511.556700.371603.254701.80250K562DDX27
TWF1ENSG00000151239.91203.35530508.205801.2435027.7554024.62270K562DDX3X
TWF1ENSG00000151239.91263.16320807.420000.6455011.9357010.68440K562DDX47
TWF1ENSG00000151239.9285.68040196.552900.539402.580301.30140K562DHX30
TWF1ENSG00000151239.9393.38300524.24170-0.414303.174202.22790K562DKC1
TWF1ENSG00000151239.9302.31090188.806700.679003.914002.29570K562DNAJC21
TWF1ENSG00000151239.9652.91340445.703600.550703.582102.10410K562EEF2
TWF1ENSG00000151239.9701.15490430.721300.702905.363004.06690K562EFTUD2
TWF1ENSG00000151239.91064.22520461.314001.2059016.3376013.65820K562EIF3D
TWF1ENSG00000151239.9609.77810478.205100.350602.794301.63300K562EIF4B
TWF1ENSG00000151239.91491.523601041.118200.518608.531006.90930K562EIF4G2
TWF1ENSG00000151239.9732.83420383.280100.935009.424406.58770K562FAM120A
TWF1ENSG00000151239.91156.98430548.968101.075504.370603.29410K562FMR1
TWF1ENSG00000151239.91025.11020465.338801.1393016.2134013.82920K562FTO
TWF1ENSG00000151239.9637.53490480.349000.408303.262901.79450K562FUS
TWF1ENSG00000151239.91056.99900552.201900.9366017.0395015.64980K562FXR1
TWF1ENSG00000151239.9813.30050567.059300.520204.789302.85210K562G3BP1
TWF1ENSG00000151239.91019.65500596.477300.773406.582405.38810K562G3BP2
TWF1ENSG00000151239.9609.92790431.812400.498102.779501.35830K562GEMIN5
TWF1ENSG00000151239.9832.68570486.504700.775203.344402.08850K562GLRX3
TWF1ENSG00000151239.91364.37290934.928400.545206.101704.97300K562GRSF1
TWF1ENSG00000151239.9745.16510507.948100.552802.839901.75300K562HNRNPA1
TWF1ENSG00000151239.9904.73380399.415701.179506.308704.20560K562HNRNPA2B1
TWF1ENSG00000151239.9873.68350546.924700.675704.019402.10060K562HNRNPAB
TWF1ENSG00000151239.9694.69050426.504200.703707.145106.22900K562HNRNPC
TWF1ENSG00000151239.9920.70150592.519900.635804.792403.12660K562HNRNPK
TWF1ENSG00000151239.9839.01880477.994200.811607.924606.22120K562HNRNPM
TWF1ENSG00000151239.9793.43450562.440600.496303.905902.83870K562HNRNPU
TWF1ENSG00000151239.91259.70920592.744201.0875014.0874011.33040K562IGF2BP2
TWF1ENSG00000151239.91138.94940533.765801.093308.385405.90860K562ILF2
TWF1ENSG00000151239.9383.88090183.432801.065309.067606.51180K562ILF3
TWF1ENSG00000151239.9347.00020177.282700.968804.993003.00840K562KHDRBS1
TWF1ENSG00000151239.91781.733601199.204600.571109.852206.59300K562CCAR2
TWF1ENSG00000151239.91144.92280517.004801.146904.760603.62630K562KIF1C
TWF1ENSG00000151239.91073.26790439.847801.2868015.7902013.41090K562KRR1
TWF1ENSG00000151239.9242.79190432.51730-0.833006.561304.14120K562LIN28B
TWF1ENSG00000151239.9433.38020623.36810-0.524502.696901.86800K562MAGOH
TWF1ENSG00000151239.91026.97020579.173000.8262011.362309.31380K562MBNL1
TWF1ENSG00000151239.91857.916801109.761500.7433011.607309.43090K562MSI2
TWF1ENSG00000151239.9849.32800511.492200.7315011.5569010.02990K562MTPAP
TWF1ENSG00000151239.9978.45420405.956501.269103.821402.73940K562NAA15
TWF1ENSG00000151239.91164.40910530.174001.1350024.1612021.07430K562NCBP2
TWF1ENSG00000151239.9771.44440419.272600.879604.741501.92090K562NFX1
TWF1ENSG00000151239.91659.180101138.730600.542903.518901.81730K562NOL12
TWF1ENSG00000151239.9712.17290424.053600.747906.993604.76100K562NONO
TWF1ENSG00000151239.9726.59430568.336300.354303.495902.66660K562NSUN2
TWF1ENSG00000151239.91327.25600561.320201.2415011.674509.19240K562PABPC1
TWF1ENSG00000151239.9971.52000630.657000.623303.893101.71810K562PABPC4
TWF1ENSG00000151239.9787.97300349.238401.173806.775505.01900K562PABPN1
TWF1ENSG00000151239.9787.22000554.719500.504903.561502.45460K562PCBP2
TWF1ENSG00000151239.91363.301301069.769200.349703.736402.07640K562PNPT1
TWF1ENSG00000151239.9489.24350362.796300.431302.813402.00440K562POLR2G
TWF1ENSG00000151239.9834.15270450.384300.889105.243702.74170K562PRPF6
TWF1ENSG00000151239.91600.83190419.137801.9332050.8875047.94230K562PRPF8
TWF1ENSG00000151239.9957.73690605.610000.661102.534501.89520K562PTBP1
TWF1ENSG00000151239.92418.910701135.965201.0903024.0053021.52560K562PUF60
TWF1ENSG00000151239.92422.597001208.088001.0037026.9072023.80890K562PUM1
TWF1ENSG00000151239.91593.407001183.880200.428506.272504.80710K562PUM2
TWF1ENSG00000151239.91969.57040483.158202.0272042.5615040.36520K562PUS1
TWF1ENSG00000151239.9865.27340667.598200.374103.301401.33170K562QKI
TWF1ENSG00000151239.91365.18130569.143201.2621012.501809.52260K562RAVER1
TWF1ENSG00000151239.91290.33370470.729301.4547032.0567029.94840K562RBM15
TWF1ENSG00000151239.91243.83570580.935601.0982012.4283010.45280K562RBM22
TWF1ENSG00000151239.9884.07060565.914300.643507.417305.13710K562RBM25
TWF1ENSG00000151239.9847.64740429.640300.980204.426002.36490K562RBM39
TWF1ENSG00000151239.9479.25600348.854400.458103.033901.99230K562RCC2
TWF1ENSG00000151239.9935.90550611.288500.614404.139302.77070K562NELFE
TWF1ENSG00000151239.9345.49880605.83430-0.810208.132705.15830K562RECQL
TWF1ENSG00000151239.9730.87420427.042000.775102.520101.74210K562RPS19
TWF1ENSG00000151239.9341.58660486.94900-0.511502.759001.75750K562RPS3
TWF1ENSG00000151239.9771.61950428.663000.847907.027004.93020K562RRP9
TWF1ENSG00000151239.9557.02930358.752700.634703.620501.81620K562SERBP1
TWF1ENSG00000151239.9798.35110319.308401.322007.125404.90120K562SF1
TWF1ENSG00000151239.91243.58350560.769401.1489029.5854027.25030K562SF3A3
TWF1ENSG00000151239.9953.45230489.923700.9605010.490508.51480K562SF3B1
TWF1ENSG00000151239.9866.53660620.376100.482004.961003.80210K562SF3B4
TWF1ENSG00000151239.9938.13900366.829101.354608.358305.79280K562SNRNP200
TWF1ENSG00000151239.9408.67180574.51740-0.491404.244703.11220K562SRPK2
TWF1ENSG00000151239.91382.93760593.652901.2199027.9120025.67480K562SRSF1
TWF1ENSG00000151239.9338.81800470.16660-0.472702.837501.76820K562SRSF4
TWF1ENSG00000151239.9864.59560438.700600.978704.595502.58750K562SUPT6H
TWF1ENSG00000151239.91266.07650406.000101.6407031.6300028.39780K562SUPV3L1
TWF1ENSG00000151239.9935.41940600.916400.638305.270104.27670K562TARDBP
TWF1ENSG00000151239.9571.44710369.983200.627104.088302.06320K562TFIP11
TWF1ENSG00000151239.9573.64100367.807600.641104.737503.48780K562TIAL1
TWF1ENSG00000151239.9377.19550568.54570-0.592003.232702.03590K562TRA2A
TWF1ENSG00000151239.91048.50150578.343000.858205.490603.84600K562U2AF1
TWF1ENSG00000151239.91167.19780597.249200.9665018.7616016.61320K562U2AF2
TWF1ENSG00000151239.9628.42730456.978200.459502.820901.60840K562UTP3
TWF1ENSG00000151239.9759.75310515.643400.559105.394304.15090K562WDR3
TWF1ENSG00000151239.9876.41540536.189400.7088012.4166010.78010K562WDR43
TWF1ENSG00000151239.91597.701301117.130900.516106.172304.24090K562WRN
TWF1ENSG00000151239.9828.90280373.075201.151606.247203.60780K562XPO5
TWF1ENSG00000151239.9884.95620431.610101.035805.219702.70270K562YTHDC2
TWF1ENSG00000151239.92357.974701062.022501.1506027.4937024.68810K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TWF1 is not available on ENCORE database.





4 RBPs can affect the splicing of TWF1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETWF1ENSG00000151239.9chr12-441996334419980544198297441983754420002344200119-0.079000.001770.08738excludedHepG2AKAP1
SETWF1ENSG00000151239.9chr12-441996334419980544198297441983754420002344200119-0.088000.000240.02459excludedHepG2DDX3X
SETWF1ENSG00000151239.9chr12-4419797844198043441960884419626744198297441983750.067000.000100.01358includedHepG2DDX6
A3SSTWF1ENSG00000151239.9chr12-4418935844189595441893584418955844190778441908660.098000.000200.00165longerK562AQR
A3SSTWF1ENSG00000151239.9chr12-441942374419446744194237441943544419608844196155-0.588000.010600.05552shorterK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TWF1 is not avaliable on ENCORE database.