GARS

General Information

Gene Name       : GARS
Gene ID             : ENSG00000106105.13
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: GARS)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GARSENSG00000106105.13260.45245.97253.21ENCSR000AEF
HepG2GARSENSG00000106105.13113.74106.82110.28ENCSR985KAT
K562GARSENSG00000106105.13469.66517.27493.47ENCSR000AEO

Assays

4 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 4108ENCSR181SOGGARSHepG2ReleasedENCAB009SWMENCSR454AWA  
eCLIPeCLIP: 4040ENCSR448GXJGARSK562ReleasedENCAB009SWMENCSR237YKY  
knockdown followed by RNA-seq GARS-BGKcLV17-K562ENCSR503VIZGARSK562ReleasedENCSR516TLX   CRISPRKD% = 74.1,74.1
knockdown followed by RNA-seq GARS-BGHcLV18-HepG2ENCSR474EJYGARSHepG2ReleasedENCSR670KAS   CRISPRKD% = 93.3,91.2






  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
GARS4108HepG2ENCSR181SOGENCSR454AWAENCAB009SWMMA5-26714UA2693064ReleasedENCODE4
GARS4040K562ENCSR448GXJENCSR237YKYENCAB009SWMMA5-26714UA2693064ReleasedENCODE4


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
GARSENCAB009SWMMA5-26714UA2693064Released, ENCODE4BGHcLV18-23, Released, ENCODE4BGKcLV17-23, Released, ENCODE4


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
GARSK562CRISPRENCSR503VIZENCSR516TLXGARS-BGKcLV17-23,GARS-BGKcLV17-24NT-BGKcLV17-1,NT-BGKcLV17-274.1,74.1ReleasedENCODE4
GARSHepG2CRISPRENCSR474EJYENCSR670KASGARS-BGHcLV18-23,GARS-BGHcLV18-24NT-BGHcLV18-1,NT-BGHcLV18-293.3,91.2ReleasedENCODE4


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
GARSProduct_ID: MA5-26714
Lot_ID: UA2693064
Source: Thermo Fisher
Target Name: GARS-human		 GARS-HEPG2-CRISPR-MA5-26714.png<br>Caption: Western blot following CRISPR against GARS in HepG2 whole cell lysate using GARS specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against GARS. GARS protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.
 ThermoFisher_MA5-26714_UA2693064_GARS.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the GARS specific antibody, MA5-26714. Lane 1 is 2.5% of five million whole cell lysate input. Lanes 2 and 3 are 50% of IP enrichment from five million whole cell lysate using normal IgG antibody and the GARS-specific antibody, MA5-26714. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
 GARS-K562-CRISPR-MA5-26714.png<br>Caption: Western blot following CRISPR against GARS in K562 whole cell lysate using GARS specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against GARS. GARS protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.








RNA Targets

  • eCLIP assay for GARS is not avaliable on ENCORE database.



Proteins bound to RNA
  • GARS RNA is bound by 38 proteins.  







eCLIP assay for GARS is not avaliable on ENCORE database.





38 proteins are bound to GARS RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr73063965030639697+3'-UTR,CDS,intron-Proximal3.1655410.44194K562GPKOW
chr73064067430640731+3'-UTR,CDS,intron-Proximal3.040604.09398HepG2GRWD1
chr73066819930668267+3'-UTR,CDS4.0551717.58479K562RPS3
chr73067354430673613+3'-UTR3.790527.08296HepG2IGF2BP1
chr73067350230673560+3'-UTR3.2278630.06107K562PABPC4
chr73067185330671904+3'-UTR,CDS,intron-Proximal4.441263.23561HepG2U2AF1
chr73067357230673609+3'-UTR3.3933712.47611K562PUM2
chr73064080530640816+3'-UTR,CDS3.5415115.91822K562YBX3
chr73067109230671149+3'-UTR,CDS3.710384.13941K562IGF2BP1
chr73067354030673609+3'-UTR3.6766512.06808K562NOLC1
chr73064072030640779+3'-UTR,CDS3.030075.75205K562LIN28B
chr73067354930673589+3'-UTR4.8102925.50188HepG2SUB1
chr73067353830673572+3'-UTR3.1859911.26792K562PUM2
chr73067192030671970+3'-UTR,CDS5.387935.67784K562FMR1
chr73064264930642669+3'-UTR,CDS,intron-Proximal3.7170615.74533K562YBX3
chr73067186130671919+3'-UTR,CDS,intron-Proximal3.687483.02556K562IGF2BP2
chr73063955530639586+3'-UTR,CDS,intron-Proximal3.029525.48082K562GPKOW
chr73063951730639586+3'-UTR,CDS,intron-Proximal3.507899.39108K562SF3B4
chr73067354130673604+3'-UTR7.0281565.47947K562IGF2BP1
chr73067104830671132+3'-UTR,CDS,intron-Proximal3.3166410.32325HepG2U2AF2
chr73064079530640856+3'-UTR,CDS,intron-Proximal4.3536212.61233HepG2PRPF8
chr73067185030671903+3'-UTR,CDS,intron-Proximal4.338679.90849HepG2U2AF2
chr73066818630668228+3'-UTR,CDS4.223023.78929K562NOLC1
chr73063966030639732+3'-UTR,CDS,intron-Proximal3.351119.67830K562AQR
chr73067185130671931+3'-UTR,CDS,intron-Proximal4.5768420.72605K562U2AF2
chr73067182930671897+3'-UTR,CDS,intron-Proximal3.3892012.09266K562SF3B4
chr73067358930673623+3'-UTR5.7738429.01563HepG2SUB1
chr73067351130673609+3'-UTR5.5194517.02949K562ZC3H11A
chr73067350630673544+3'-UTR4.442647.58181HepG2IGF2BP1
chr73067351430673541+3'-UTR7.2622453.94755K562IGF2BP1
chr73063956230639604+3'-UTR,CDS,intron-Proximal3.815863.34184HepG2GRWD1
chr73063851230638532+5'-UTR,CDS,intron-Proximal3.514836.65588K562AQR
chr73063839130638436+5'-UTR,CDS,intron-Proximal4.254598.79285K562AQR
chr73064317230643227+CDS,intron-Proximal3.568045.43815HepG2PRPF8
chr73065674230656837+CDS3.764763.19855K562FXR1
chr73064271130642728+CDS3.776504.93978HepG2BCLAF1
chr73065677130656824+CDS3.130083.85127HepG2GRWD1
chr73065669930656747+CDS,intron-Proximal3.304513.46826K562U2AF1
chr73066104930661107+CDS4.188254.97175K562IGF2BP2
chr73065679830656893+CDS3.607566.84703HepG2G3BP1
chr73065560230655670+CDS5.2486712.44336HepG2BCLAF1
chr73067194130671981+CDS3.469635.12820K562LIN28B
chr73065689330656936+CDS,intron-Proximal5.1673612.60993K562AQR
chr73067341130673441+CDS4.648278.83026K562RPS3
chr73064309630643159+CDS,intron-Proximal3.371656.45198K562GPKOW
chr73065684030656881+CDS4.5257210.25818K562RPS3
chr73064930930649347+CDS,intron-Proximal3.069757.10293HepG2BCLAF1
chr73064924730649266+CDS3.0561314.56742K562YBX3
chr73064313230643165+CDS3.308186.33024HepG2BCLAF1
chr73066579030665880+CDS,intron-Proximal4.2876517.88177K562SF3B4
chr73066194130661986+CDS3.417973.77213K562SND1
chr73064932030649345+CDS4.219733.33639K562METAP2
chr73065670230656740+CDS,intron-Proximal3.924717.81467HepG2U2AF2
chr73065670030656744+CDS,intron-Proximal3.327429.66659K562BUD13
chr73064925130649293+CDS4.212097.65975HepG2BCLAF1
chr73065670430656736+CDS,intron-Proximal3.836888.17918K562GPKOW
chr73064926630649315+CDS3.3573725.88296K562YBX3
chr73064311930643128+CDS3.844364.76554HepG2BCLAF1
chr73064933130649347+CDS,intron-Proximal3.1258311.88642K562YBX3
chr73066590030665928+CDS4.124076.22576HepG2BCLAF1
chr73066438930664431+intron-Distal3.677173.34600K562SAFB
chr73064299630643101+intron-Distal,intron-Proximal3.324335.40698K562KHSRP
chr73067014330670200+intron-Distal4.038753.66089K562HNRNPC
chr73066354630663595+intron-Distal3.838133.55315K562SAFB
chr73063782330637871+intron-Distal3.040373.48131HepG2U2AF2
chr73063483530634964+intron-Distal,intron-Proximal3.199817.36121HepG2HNRNPK
chr73066837730668464+intron-Distal,intron-Proximal6.5504313.80520K562QKI
chr73064797630648061+intron-Distal4.079374.79983HepG2U2AF2
chr73064579430645880+intron-Distal3.998923.34098HepG2HNRNPM
chr73064812030648184+intron-Distal4.113766.10049K562TIA1
chr73064336330643411+intron-Distal3.903714.06013K562PRPF8
chr73064778030647844+intron-Distal3.087013.69044K562KHSRP
chr73065370530653772+intron-Distal4.688764.07352K562KHSRP
chr73066126730661330+intron-Distal3.262185.21454K562TIA1
chr73063496630635098+intron-Distal5.070988.23486K562MATR3
chr73064463730644677+intron-Distal4.338974.51299HepG2SUGP2
chr73066620730666293+intron-Distal3.140543.37821K562ILF3
chr73064325730643307+intron-Distal,intron-Proximal3.575744.76426K562PRPF8
chr73065338730653509+intron-Distal3.688684.63118HepG2HNRNPM
chr73064467730644752+intron-Distal5.107109.59838HepG2SUGP2
chr73063481630634936+intron-Distal,intron-Proximal5.4687112.22460K562MATR3
chr73063486330634961+intron-Distal4.090614.34008K562HNRNPK
chr73063496130635086+intron-Distal3.648625.30521K562HNRNPK
chr73066360630663658+intron-Distal3.228534.36576K562SAFB
chr73064336030643457+intron-Distal7.3649231.98927HepG2QKI
chr73064335230643421+intron-Distal4.077978.26514HepG2U2AF2
chr73064089230640953+intron-Distal,intron-Proximal3.161683.17919K562KHSRP
chr73065222430652322+intron-Distal3.732356.13002K562EXOSC5
chr73067014830670208+intron-Distal3.777446.74166HepG2HNRNPC
chr73063481830634925+intron-Distal,intron-Proximal5.185566.95895K562PTBP1
chr73064334630643470+intron-Distal6.30980400.00000K562QKI
chr73063493930635058+intron-Distal3.575596.68057HepG2PCBP2
chr73065222930652329+intron-Distal3.414993.92959K562TAF15
chr73064320930643229+intron-Proximal3.623636.69182K562AQR
chr73067116730671196+intron-Proximal5.060863.62536K562AQR
chr73063853230638555+intron-Proximal5.634817.28294K562AQR
chr73065668230656691+intron-Proximal3.030163.50010K562AQR
chr73063476230634811+intron-Proximal4.312117.15298K562AQR
chr73064914530649192+intron-Proximal6.2834516.47759K562SF3B4
chr73065567430655683+intron-Proximal4.342336.48405K562AQR
chr73064081630640859+intron-Proximal5.358796.83960K562AQR
chr73066828630668327+intron-Proximal3.342335.28960K562AQR
chr73065669130656726+intron-Proximal3.316577.02925K562AQR
chr73066208930662121+intron-Proximal5.432626.22530K562AQR
chr73065568330655716+intron-Proximal5.0400712.70303K562AQR
chr73067205330672097+intron-Proximal6.7575419.71511K562AQR
chr73066207830662089+intron-Proximal5.118605.17615K562AQR
chr73067332230673351+intron-Proximal4.118605.47926K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GARS is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GARS is not available on ENCORE database.

  • 142 RBPs can affect the levels of GARS.  








The Knockdown/knockout RNA-Seq assay for GARS is not available on ENCORE database.





142 RBPs can affect the gene expression of GARS :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GARSENSG00000106105.91956.681301302.394200.587104.674703.31390HepG2AATF
GARSENSG00000106105.91506.804402167.43690-0.5245011.013209.61440HepG2AKAP8L
GARSENSG00000106105.93548.805005583.80940-0.653909.047107.92430HepG2AUH
GARSENSG00000106105.93327.454802574.851300.369804.871203.88460HepG2CALR
GARSENSG00000106105.92273.897803640.80990-0.679106.536805.02040HepG2CCAR1
GARSENSG00000106105.91892.891302156.81380-0.188302.310001.69350HepG2CKAP4
GARSENSG00000106105.95295.425203052.791100.794506.519404.88500HepG2CPSF7
GARSENSG00000106105.9878.117501130.54590-0.364502.971401.85940HepG2CSTF2
GARSENSG00000106105.91866.617201333.114900.485503.178201.68660HepG2CSTF2T
GARSENSG00000106105.93537.953502568.843900.461709.551108.49310HepG2CELF1
GARSENSG00000106105.92051.825501406.287600.544907.621406.11890HepG2DDX24
GARSENSG00000106105.93297.254804539.47890-0.461304.409703.63370HepG2DDX3X
GARSENSG00000106105.97258.266805885.696000.302302.891901.57170HepG2DDX47
GARSENSG00000106105.91863.965201504.233600.309202.773501.41730HepG2DDX52
GARSENSG00000106105.92315.932901799.948600.363502.067301.38880HepG2DDX55
GARSENSG00000106105.95053.931303527.669200.518602.725701.75550HepG2DDX59
GARSENSG00000106105.98185.842303899.079801.0699018.5750017.16830HepG2DDX6
GARSENSG00000106105.91451.100902064.01030-0.508309.958808.83550HepG2DKC1
GARSENSG00000106105.92457.963701902.200500.369705.480304.52120HepG2DNAJC21
GARSENSG00000106105.92145.263201885.524000.186102.329201.72040HepG2DNAJC2
GARSENSG00000106105.91390.763901794.65180-0.367802.817601.88840HepG2EEF2
GARSENSG00000106105.92540.909801323.407600.9410011.360809.28500HepG2AGO1
GARSENSG00000106105.92934.964803748.70330-0.353002.782302.18730HepG2EIF2S1
GARSENSG00000106105.95497.287202811.660300.9672013.6403011.30570HepG2EIF2S2
GARSENSG00000106105.91892.248201456.808900.377203.010002.07120HepG2EIF3D
GARSENSG00000106105.91870.815404142.96250-1.1470019.6196017.94290HepG2EIF4A3
GARSENSG00000106105.96250.945904033.364700.632005.581004.62640HepG2EIF4B
GARSENSG00000106105.93840.434802725.019600.4949012.1510010.64160HepG2EIF4G1
GARSENSG00000106105.99135.164606411.493900.5107011.046309.97490HepG2ETF1
GARSENSG00000106105.91056.994001302.12100-0.300902.622701.48670HepG2FAM120A
GARSENSG00000106105.91816.637203111.93650-0.776503.602902.43810HepG2FTO
GARSENSG00000106105.91551.494002854.26910-0.8795018.3238016.38160HepG2FUBP3
GARSENSG00000106105.93409.329904179.45600-0.293802.124401.51460HepG2FXR1
GARSENSG00000106105.92239.499403877.38420-0.7919010.740909.47360HepG2G3BP1
GARSENSG00000106105.92620.960704115.91460-0.651108.747007.15160HepG2G3BP2
GARSENSG00000106105.91493.420602300.37330-0.623202.446601.49370HepG2GNB2L1
GARSENSG00000106105.92500.627003521.29350-0.493804.720203.89800HepG2GPKOW
GARSENSG00000106105.92752.604603851.90620-0.484803.020201.85550HepG2GRSF1
GARSENSG00000106105.92755.767302059.625000.420008.350606.76420HepG2HDGF
GARSENSG00000106105.93126.035902538.487500.300304.675703.51250HepG2HNRNPA2B1
GARSENSG00000106105.91095.797802136.15820-0.9630018.7425017.10630HepG2HNRNPC
GARSENSG00000106105.92780.596703925.44200-0.497505.998504.99870HepG2HNRNPK
GARSENSG00000106105.93016.851302516.106400.261804.675403.81650HepG2HNRNPL
GARSENSG00000106105.91762.565702122.03230-0.267803.557802.87850HepG2HNRNPU
GARSENSG00000106105.92789.595503941.39220-0.498605.210104.31000HepG2IGF2BP2
GARSENSG00000106105.91808.999103964.15030-1.1318016.3434013.74550HepG2KHSRP
GARSENSG00000106105.92924.429601972.058400.5684018.7149016.35380HepG2KIF1C
GARSENSG00000106105.92245.555104180.91240-0.8967014.5564013.10470HepG2MAGOH
GARSENSG00000106105.94144.176203029.671200.451802.478701.71090HepG2MSI2
GARSENSG00000106105.92580.136703427.56610-0.409702.496701.57960HepG2MTPAP
GARSENSG00000106105.91964.612604303.53260-1.1313017.4515015.95020HepG2NCBP2
GARSENSG00000106105.96712.221503802.855200.819606.265104.89460HepG2PABPC1
GARSENSG00000106105.92859.715902100.398600.445109.104107.70990HepG2PARN
GARSENSG00000106105.95370.907703731.427200.525303.094601.48400HepG2PNPT1
GARSENSG00000106105.93205.323701892.676200.7599021.2279019.33550HepG2PPIL4
GARSENSG00000106105.93367.663904545.82170-0.432803.778802.88800HepG2PRPF4
GARSENSG00000106105.92378.074201664.690800.514403.128201.84180HepG2PRPF6
GARSENSG00000106105.91947.179301388.105100.488204.033703.08090HepG2PRPF8
GARSENSG00000106105.92214.426503964.47010-0.8402031.7104030.26330HepG2PTBP1
GARSENSG00000106105.93962.514302775.461300.5136018.4294017.17350HepG2PUM1
GARSENSG00000106105.91854.557002197.42650-0.244703.307502.64920HepG2PUS1
GARSENSG00000106105.92779.710501528.185600.863006.455205.40400HepG2RAVER1
GARSENSG00000106105.95147.026603132.698500.7162017.5283015.68330HepG2RBM15
GARSENSG00000106105.93636.179105358.71120-0.559506.315205.60950HepG2RBM22
GARSENSG00000106105.94807.095903896.727800.302803.260602.53470HepG2RBM25
GARSENSG00000106105.92378.303704412.06910-0.8915037.7381036.24000HepG2NELFE
GARSENSG00000106105.92656.805304109.25260-0.6292020.1243018.72130HepG2RECQL
GARSENSG00000106105.92683.270203724.79290-0.473206.151405.18980HepG2RPLP0
GARSENSG00000106105.9839.608101417.59210-0.7557011.7492010.58830HepG2RPS19
GARSENSG00000106105.91274.825202507.09400-0.975705.954604.80490HepG2RPS2
GARSENSG00000106105.92576.922104176.36650-0.696606.122404.93800HepG2RPS3A
GARSENSG00000106105.91580.448101889.74000-0.257903.451702.74620HepG2SAFB2
GARSENSG00000106105.95415.980303932.844600.461503.561402.08670HepG2SART3
GARSENSG00000106105.94174.367302765.630000.593805.096704.16260HepG2SF3A3
GARSENSG00000106105.92828.143001490.923800.923504.891102.82640HepG2SLTM
GARSENSG00000106105.92751.661503700.89120-0.427602.419401.69070HepG2SNRNP70
GARSENSG00000106105.92930.192004308.23510-0.5561017.6630016.68530HepG2SRSF1
GARSENSG00000106105.92818.634103579.14320-0.344602.260501.36690HepG2SRSF3
GARSENSG00000106105.91886.389302581.48750-0.452609.148808.09860HepG2SRSF5
GARSENSG00000106105.94144.110303504.982900.241603.914003.28080HepG2SRSF9
GARSENSG00000106105.92319.136905254.46040-1.1800021.0751019.94890HepG2SSB
GARSENSG00000106105.94118.772102500.541800.719906.255104.49230HepG2STAU1
GARSENSG00000106105.94166.167001428.112501.5445024.7523021.69280HepG2SUB1
GARSENSG00000106105.93777.049002935.865400.363408.534807.54300HepG2SUCLG1
GARSENSG00000106105.93547.127402527.779500.488702.752401.81390HepG2SUPT6H
GARSENSG00000106105.92595.697305967.47300-1.201008.839607.05350HepG2TBRG4
GARSENSG00000106105.9882.343802061.80070-1.2245036.5568035.11900HepG2TIAL1
GARSENSG00000106105.92557.045301534.375500.736706.316604.15560HepG2TRA2A
GARSENSG00000106105.91828.640301157.574100.659606.143003.89990HepG2TROVE2
GARSENSG00000106105.94277.786902703.687000.661807.850706.41130HepG2UBE2L3
GARSENSG00000106105.91816.958202452.70340-0.432803.465602.69810HepG2UPF1
GARSENSG00000106105.93012.772501502.657301.0035010.910508.49340HepG2XRCC5
GARSENSG00000106105.92583.664601680.552000.620404.765803.39640HepG2XRCC6
GARSENSG00000106105.91333.458401763.73790-0.403503.619602.79900HepG2XRN2
GARSENSG00000106105.92970.303704486.41550-0.595005.890804.96750HepG2ZC3H8
GARSENSG00000106105.95581.402502697.486701.0489051.7995050.20260HepG2ZNF622
GARSENSG00000106105.92347.583501526.699300.620705.038103.22220HepG2ZRANB2
GARSENSG00000106105.99223.9304013130.58210-0.509504.151902.62840K562ABCF1
GARSENSG00000106105.92677.038904373.68860-0.708203.252401.37660K562ADAR
GARSENSG00000106105.929923.0443025385.827700.237102.205001.33830K562AKAP8
GARSENSG00000106105.919805.9710024038.56450-0.279402.661102.01960K562AKAP8L
GARSENSG00000106105.98798.4533012757.44350-0.536007.768706.86770K562AQR
GARSENSG00000106105.95008.694906382.31950-0.349605.528404.15500K562BCLAF1
GARSENSG00000106105.95984.877007892.13910-0.399103.525902.54160K562BOP1
GARSENSG00000106105.97148.187709145.41360-0.355502.818101.38570K562BUD13
GARSENSG00000106105.93324.705604282.57680-0.365303.626102.38250K562CCAR1
GARSENSG00000106105.99618.0039016760.05460-0.801202.776201.71160K562CNOT7
GARSENSG00000106105.97854.2615011928.76450-0.602909.420007.38640K562CPEB4
GARSENSG00000106105.96566.210308391.65970-0.353904.766303.74020K562CPSF6
GARSENSG00000106105.93284.667504677.86510-0.510104.341002.01570K562YBX3
GARSENSG00000106105.93877.764404841.93890-0.320404.765803.32430K562CSTF2
GARSENSG00000106105.914250.5812017789.94050-0.320005.322303.96330K562CELF1
GARSENSG00000106105.97261.278608664.47400-0.254903.923002.46610K562DDX21
GARSENSG00000106105.94673.271907361.71350-0.6556012.9737010.55010K562DDX3X
GARSENSG00000106105.99310.4501012341.01360-0.406506.118605.20290K562DDX47
GARSENSG00000106105.930371.6701025866.504700.231503.640902.61770K562DKC1
GARSENSG00000106105.92828.858304605.34250-0.703109.042806.77170K562DNAJC21
GARSENSG00000106105.911731.172308260.490900.5059013.8113012.38950K562EIF2S2
GARSENSG00000106105.94594.124308521.79040-0.8914013.3863011.60240K562EIF3G
GARSENSG00000106105.95066.769507691.24170-0.602209.973208.39870K562EIF4A3
GARSENSG00000106105.99751.1644014466.58420-0.5691018.2878016.02150K562EIF4G2
GARSENSG00000106105.97565.3215010034.11020-0.407403.037301.32890K562ESF1
GARSENSG00000106105.95669.739008538.21510-0.590709.025207.43370K562FMR1
GARSENSG00000106105.94569.338807236.86420-0.663409.182507.42050K562FTO
GARSENSG00000106105.95925.402907998.57940-0.432809.867308.80680K562FXR1
GARSENSG00000106105.911470.804308121.866900.498003.973403.08800K562G3BP2
GARSENSG00000106105.96482.863208012.01090-0.305502.878202.06810K562GPKOW
GARSENSG00000106105.97039.1251011008.36470-0.645106.968405.76130K562GRSF1
GARSENSG00000106105.99004.2945015680.94060-0.800303.148601.45410K562HNRNPAB
GARSENSG00000106105.94169.008407842.53610-0.9116025.7087023.97120K562HNRNPC
GARSENSG00000106105.94351.153007003.97970-0.6868014.0873011.52820K562HNRNPF
GARSENSG00000106105.99015.5370011153.55360-0.307002.931201.84070K562HNRNPL
GARSENSG00000106105.912743.298409182.586400.4727010.496008.77970K562HNRNPU
GARSENSG00000106105.924180.9806012796.340900.9180021.4668019.42690K562HSPD1
GARSENSG00000106105.93277.773204324.48860-0.399803.154701.56350K562KHDRBS1
GARSENSG00000106105.99327.477007596.229200.296102.867501.45310K562LARP7
GARSENSG00000106105.98220.9231011279.08760-0.456306.767605.42540K562MAGOH
GARSENSG00000106105.929018.2779024420.174400.248802.619801.58240K562MAK16
GARSENSG00000106105.98614.0177011256.25730-0.386005.369004.02600K562MATR3
GARSENSG00000106105.95044.791707820.59940-0.6325012.0603010.15760K562METAP2
GARSENSG00000106105.911183.2972015419.58300-0.463406.605404.87980K562MSI2
GARSENSG00000106105.96660.280409406.38000-0.498106.510605.31840K562MTPAP
GARSENSG00000106105.98434.6412010450.59000-0.309205.059604.09250K562NSUN2
GARSENSG00000106105.98506.3384016101.41700-0.920603.280401.91890K562PABPC1
GARSENSG00000106105.97414.5221010035.65670-0.436706.016404.55770K562PCBP2
GARSENSG00000106105.96101.040208868.41530-0.539606.229004.97730K562PCBP3
GARSENSG00000106105.918576.0076014864.984700.321403.693702.04350K562PNPT1
GARSENSG00000106105.94726.513406802.25180-0.5252010.246108.74750K562POLR2G
GARSENSG00000106105.96381.5650010958.31480-0.7800020.0956018.37850K562PTBP1
GARSENSG00000106105.913234.2521015783.84740-0.254202.769201.95290K562PUF60
GARSENSG00000106105.911306.8851016449.41880-0.5408016.8214014.54270K562PUM2
GARSENSG00000106105.914286.8041010438.652700.452607.525004.96150K562RBM17
GARSENSG00000106105.97029.4282010507.90010-0.580009.100307.43260K562RBM22
GARSENSG00000106105.97171.2023011057.84080-0.624809.158607.10870K562NELFE
GARSENSG00000106105.93581.771805561.30660-0.634807.296405.95550K562RPS19
GARSENSG00000106105.97231.764006061.363500.254602.440401.42690K562SAFB
GARSENSG00000106105.96578.980504671.933800.493703.281001.57000K562SERBP1
GARSENSG00000106105.98145.6760010313.17030-0.340405.354104.24680K562SF3A3
GARSENSG00000106105.93561.175804717.38240-0.405604.381702.75550K562SLBP
GARSENSG00000106105.910151.948907825.409300.375404.338302.23260K562SND1
GARSENSG00000106105.97290.3638010566.16530-0.535409.715608.07490K562SRPK2
GARSENSG00000106105.95010.6131010742.76400-1.1003039.0237036.44460K562SRSF1
GARSENSG00000106105.96492.949707731.84070-0.251903.590402.24700K562SRSF7
GARSENSG00000106105.99030.4738012383.71670-0.455604.020202.36280K562SSRP1
GARSENSG00000106105.93519.296905286.06770-0.586906.667705.03760K562SUPV3L1
GARSENSG00000106105.98300.116806823.008800.282603.452602.53610K562SYNCRIP
GARSENSG00000106105.96891.1305010872.45980-0.6579010.372408.86010K562TARDBP
GARSENSG00000106105.93509.244304818.70580-0.457504.414702.32100K562TFIP11
GARSENSG00000106105.94820.973506763.33760-0.488405.382404.03610K562TIAL1
GARSENSG00000106105.99393.013408130.726400.208102.103001.40330K562U2AF2
GARSENSG00000106105.98057.0844011081.04100-0.459809.079707.87140K562UPF1
GARSENSG00000106105.99759.0042012809.27760-0.392403.437202.09230K562UTP3
GARSENSG00000106105.97771.746409860.42420-0.343405.720604.54960K562WDR43
GARSENSG00000106105.94442.864905697.16950-0.358803.240901.89620K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GARS is not available on ENCORE database.





3 RBPs can affect the splicing of GARS :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGARSENSG00000106105.9chr7+3063543930635549306344563063475930638411306385130.081000.000020.00080includedHepG2U2AF1
SEGARSENSG00000106105.9chr7+3063543930635549306344563063475930638411306385130.063000.000020.07941includedK562SND1
SEGARSENSG00000106105.9chr7+3063543930635549306344563063475930638411306385130.052000.000280.01588includedHepG2MATR3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GARS is not avaliable on ENCORE database.